Job ID = 14171787 SRX = SRX9008836 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 23637989 spots for SRR12518308/SRR12518308.sra Written 23637989 spots for SRR12518308/SRR12518308.sra fastq に変換しました。 bowtie でマッピング中... Your job 14172652 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:01 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:52:13 23637989 reads; of these: 23637989 (100.00%) were paired; of these: 4855369 (20.54%) aligned concordantly 0 times 11539554 (48.82%) aligned concordantly exactly 1 time 7243066 (30.64%) aligned concordantly >1 times ---- 4855369 pairs aligned concordantly 0 times; of these: 1869155 (38.50%) aligned discordantly 1 time ---- 2986214 pairs aligned 0 times concordantly or discordantly; of these: 5972428 mates make up the pairs; of these: 1998805 (33.47%) aligned 0 times 671067 (11.24%) aligned exactly 1 time 3302556 (55.30%) aligned >1 times 95.77% overall alignment rate Time searching: 01:52:14 Overall time: 01:52:14 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 20 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 1769451 / 20580791 = 0.0860 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 11 Dec 2021 15:00:55: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX9008836/SRX9008836.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX9008836/SRX9008836.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX9008836/SRX9008836.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX9008836/SRX9008836.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 11 Dec 2021 15:00:55: #1 read tag files... INFO @ Sat, 11 Dec 2021 15:00:55: #1 read treatment tags... INFO @ Sat, 11 Dec 2021 15:01:05: 1000000 INFO @ Sat, 11 Dec 2021 15:01:15: 2000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 11 Dec 2021 15:01:25: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX9008836/SRX9008836.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX9008836/SRX9008836.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX9008836/SRX9008836.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX9008836/SRX9008836.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 11 Dec 2021 15:01:25: #1 read tag files... INFO @ Sat, 11 Dec 2021 15:01:25: #1 read treatment tags... INFO @ Sat, 11 Dec 2021 15:01:25: 3000000 INFO @ Sat, 11 Dec 2021 15:01:35: 1000000 INFO @ Sat, 11 Dec 2021 15:01:35: 4000000 INFO @ Sat, 11 Dec 2021 15:01:45: 2000000 INFO @ Sat, 11 Dec 2021 15:01:45: 5000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 11 Dec 2021 15:01:55: 3000000 INFO @ Sat, 11 Dec 2021 15:01:55: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX9008836/SRX9008836.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX9008836/SRX9008836.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX9008836/SRX9008836.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX9008836/SRX9008836.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 11 Dec 2021 15:01:55: #1 read tag files... INFO @ Sat, 11 Dec 2021 15:01:55: #1 read treatment tags... INFO @ Sat, 11 Dec 2021 15:01:55: 6000000 INFO @ Sat, 11 Dec 2021 15:02:05: 4000000 INFO @ Sat, 11 Dec 2021 15:02:05: 1000000 INFO @ Sat, 11 Dec 2021 15:02:06: 7000000 INFO @ Sat, 11 Dec 2021 15:02:15: 5000000 INFO @ Sat, 11 Dec 2021 15:02:16: 2000000 INFO @ Sat, 11 Dec 2021 15:02:17: 8000000 INFO @ Sat, 11 Dec 2021 15:02:26: 6000000 INFO @ Sat, 11 Dec 2021 15:02:26: 3000000 INFO @ Sat, 11 Dec 2021 15:02:27: 9000000 INFO @ Sat, 11 Dec 2021 15:02:37: 7000000 INFO @ Sat, 11 Dec 2021 15:02:38: 10000000 INFO @ Sat, 11 Dec 2021 15:02:38: 4000000 INFO @ Sat, 11 Dec 2021 15:02:48: 11000000 INFO @ Sat, 11 Dec 2021 15:02:48: 5000000 INFO @ Sat, 11 Dec 2021 15:02:49: 8000000 INFO @ Sat, 11 Dec 2021 15:02:58: 12000000 INFO @ Sat, 11 Dec 2021 15:02:58: 6000000 INFO @ Sat, 11 Dec 2021 15:03:01: 9000000 INFO @ Sat, 11 Dec 2021 15:03:09: 13000000 INFO @ Sat, 11 Dec 2021 15:03:09: 7000000 INFO @ Sat, 11 Dec 2021 15:03:12: 10000000 INFO @ Sat, 11 Dec 2021 15:03:19: 14000000 INFO @ Sat, 11 Dec 2021 15:03:19: 8000000 INFO @ Sat, 11 Dec 2021 15:03:24: 11000000 INFO @ Sat, 11 Dec 2021 15:03:30: 15000000 INFO @ Sat, 11 Dec 2021 15:03:30: 9000000 INFO @ Sat, 11 Dec 2021 15:03:34: 12000000 INFO @ Sat, 11 Dec 2021 15:03:40: 16000000 INFO @ Sat, 11 Dec 2021 15:03:41: 10000000 INFO @ Sat, 11 Dec 2021 15:03:44: 13000000 INFO @ Sat, 11 Dec 2021 15:03:51: 11000000 INFO @ Sat, 11 Dec 2021 15:03:52: 17000000 INFO @ Sat, 11 Dec 2021 15:03:55: 14000000 INFO @ Sat, 11 Dec 2021 15:04:02: 12000000 INFO @ Sat, 11 Dec 2021 15:04:03: 18000000 INFO @ Sat, 11 Dec 2021 15:04:05: 15000000 INFO @ Sat, 11 Dec 2021 15:04:13: 13000000 INFO @ Sat, 11 Dec 2021 15:04:13: 19000000 INFO @ Sat, 11 Dec 2021 15:04:15: 16000000 INFO @ Sat, 11 Dec 2021 15:04:23: 14000000 INFO @ Sat, 11 Dec 2021 15:04:23: 20000000 INFO @ Sat, 11 Dec 2021 15:04:25: 17000000 INFO @ Sat, 11 Dec 2021 15:04:33: 15000000 INFO @ Sat, 11 Dec 2021 15:04:34: 21000000 INFO @ Sat, 11 Dec 2021 15:04:36: 18000000 INFO @ Sat, 11 Dec 2021 15:04:44: 16000000 INFO @ Sat, 11 Dec 2021 15:04:44: 22000000 INFO @ Sat, 11 Dec 2021 15:04:46: 19000000 INFO @ Sat, 11 Dec 2021 15:04:54: 17000000 INFO @ Sat, 11 Dec 2021 15:04:54: 23000000 INFO @ Sat, 11 Dec 2021 15:04:56: 20000000 INFO @ Sat, 11 Dec 2021 15:05:04: 18000000 INFO @ Sat, 11 Dec 2021 15:05:05: 24000000 INFO @ Sat, 11 Dec 2021 15:05:07: 21000000 INFO @ Sat, 11 Dec 2021 15:05:15: 19000000 INFO @ Sat, 11 Dec 2021 15:05:16: 25000000 INFO @ Sat, 11 Dec 2021 15:05:17: 22000000 INFO @ Sat, 11 Dec 2021 15:05:25: 20000000 INFO @ Sat, 11 Dec 2021 15:05:27: 26000000 INFO @ Sat, 11 Dec 2021 15:05:28: 23000000 INFO @ Sat, 11 Dec 2021 15:05:35: 21000000 INFO @ Sat, 11 Dec 2021 15:05:37: 27000000 INFO @ Sat, 11 Dec 2021 15:05:38: 24000000 INFO @ Sat, 11 Dec 2021 15:05:46: 22000000 INFO @ Sat, 11 Dec 2021 15:05:48: 28000000 INFO @ Sat, 11 Dec 2021 15:05:49: 25000000 INFO @ Sat, 11 Dec 2021 15:05:56: 23000000 INFO @ Sat, 11 Dec 2021 15:05:59: 29000000 INFO @ Sat, 11 Dec 2021 15:05:59: 26000000 INFO @ Sat, 11 Dec 2021 15:06:07: 24000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sat, 11 Dec 2021 15:06:09: 30000000 INFO @ Sat, 11 Dec 2021 15:06:10: 27000000 INFO @ Sat, 11 Dec 2021 15:06:17: 25000000 INFO @ Sat, 11 Dec 2021 15:06:20: 31000000 INFO @ Sat, 11 Dec 2021 15:06:20: 28000000 INFO @ Sat, 11 Dec 2021 15:06:28: 26000000 INFO @ Sat, 11 Dec 2021 15:06:30: 32000000 INFO @ Sat, 11 Dec 2021 15:06:31: 29000000 INFO @ Sat, 11 Dec 2021 15:06:38: 27000000 INFO @ Sat, 11 Dec 2021 15:06:41: 33000000 INFO @ Sat, 11 Dec 2021 15:06:41: 30000000 INFO @ Sat, 11 Dec 2021 15:06:49: 28000000 INFO @ Sat, 11 Dec 2021 15:06:51: 34000000 INFO @ Sat, 11 Dec 2021 15:06:52: 31000000 INFO @ Sat, 11 Dec 2021 15:06:59: 29000000 INFO @ Sat, 11 Dec 2021 15:07:02: 35000000 INFO @ Sat, 11 Dec 2021 15:07:02: 32000000 INFO @ Sat, 11 Dec 2021 15:07:10: 30000000 INFO @ Sat, 11 Dec 2021 15:07:13: 36000000 INFO @ Sat, 11 Dec 2021 15:07:13: 33000000 INFO @ Sat, 11 Dec 2021 15:07:20: 31000000 INFO @ Sat, 11 Dec 2021 15:07:23: 34000000 INFO @ Sat, 11 Dec 2021 15:07:23: 37000000 INFO @ Sat, 11 Dec 2021 15:07:31: 32000000 INFO @ Sat, 11 Dec 2021 15:07:34: 35000000 INFO @ Sat, 11 Dec 2021 15:07:34: 38000000 INFO @ Sat, 11 Dec 2021 15:07:41: 33000000 BigWig に変換しました。 INFO @ Sat, 11 Dec 2021 15:07:45: 36000000 INFO @ Sat, 11 Dec 2021 15:07:45: 39000000 INFO @ Sat, 11 Dec 2021 15:07:52: 34000000 INFO @ Sat, 11 Dec 2021 15:07:55: 40000000 INFO @ Sat, 11 Dec 2021 15:07:56: 37000000 INFO @ Sat, 11 Dec 2021 15:08:03: 35000000 INFO @ Sat, 11 Dec 2021 15:08:06: 41000000 INFO @ Sat, 11 Dec 2021 15:08:06: 38000000 INFO @ Sat, 11 Dec 2021 15:08:14: #1 tag size is determined as 101 bps INFO @ Sat, 11 Dec 2021 15:08:14: #1 tag size = 101 INFO @ Sat, 11 Dec 2021 15:08:14: #1 total tags in treatment: 17235125 INFO @ Sat, 11 Dec 2021 15:08:14: #1 user defined the maximum tags... INFO @ Sat, 11 Dec 2021 15:08:14: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 11 Dec 2021 15:08:14: 36000000 INFO @ Sat, 11 Dec 2021 15:08:14: #1 tags after filtering in treatment: 15883742 INFO @ Sat, 11 Dec 2021 15:08:14: #1 Redundant rate of treatment: 0.08 INFO @ Sat, 11 Dec 2021 15:08:14: #1 finished! INFO @ Sat, 11 Dec 2021 15:08:14: #2 Build Peak Model... INFO @ Sat, 11 Dec 2021 15:08:14: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 11 Dec 2021 15:08:15: #2 number of paired peaks: 917 WARNING @ Sat, 11 Dec 2021 15:08:15: Fewer paired peaks (917) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 917 pairs to build model! INFO @ Sat, 11 Dec 2021 15:08:15: start model_add_line... INFO @ Sat, 11 Dec 2021 15:08:15: start X-correlation... INFO @ Sat, 11 Dec 2021 15:08:15: end of X-cor INFO @ Sat, 11 Dec 2021 15:08:15: #2 finished! INFO @ Sat, 11 Dec 2021 15:08:15: #2 predicted fragment length is 200 bps INFO @ Sat, 11 Dec 2021 15:08:15: #2 alternative fragment length(s) may be 200 bps INFO @ Sat, 11 Dec 2021 15:08:15: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX9008836/SRX9008836.05_model.r WARNING @ Sat, 11 Dec 2021 15:08:15: #2 Since the d (200) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 11 Dec 2021 15:08:15: #2 You may need to consider one of the other alternative d(s): 200 WARNING @ Sat, 11 Dec 2021 15:08:15: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 11 Dec 2021 15:08:15: #3 Call peaks... INFO @ Sat, 11 Dec 2021 15:08:15: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 11 Dec 2021 15:08:17: 39000000 INFO @ Sat, 11 Dec 2021 15:08:24: 37000000 INFO @ Sat, 11 Dec 2021 15:08:27: 40000000 INFO @ Sat, 11 Dec 2021 15:08:34: 38000000 INFO @ Sat, 11 Dec 2021 15:08:37: 41000000 INFO @ Sat, 11 Dec 2021 15:08:44: #1 tag size is determined as 101 bps INFO @ Sat, 11 Dec 2021 15:08:44: #1 tag size = 101 INFO @ Sat, 11 Dec 2021 15:08:44: #1 total tags in treatment: 17235125 INFO @ Sat, 11 Dec 2021 15:08:44: #1 user defined the maximum tags... INFO @ Sat, 11 Dec 2021 15:08:44: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 11 Dec 2021 15:08:44: 39000000 INFO @ Sat, 11 Dec 2021 15:08:44: #1 tags after filtering in treatment: 15883742 INFO @ Sat, 11 Dec 2021 15:08:44: #1 Redundant rate of treatment: 0.08 INFO @ Sat, 11 Dec 2021 15:08:44: #1 finished! INFO @ Sat, 11 Dec 2021 15:08:44: #2 Build Peak Model... INFO @ Sat, 11 Dec 2021 15:08:44: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 11 Dec 2021 15:08:45: #2 number of paired peaks: 917 WARNING @ Sat, 11 Dec 2021 15:08:45: Fewer paired peaks (917) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 917 pairs to build model! INFO @ Sat, 11 Dec 2021 15:08:45: start model_add_line... INFO @ Sat, 11 Dec 2021 15:08:46: start X-correlation... INFO @ Sat, 11 Dec 2021 15:08:46: end of X-cor INFO @ Sat, 11 Dec 2021 15:08:46: #2 finished! INFO @ Sat, 11 Dec 2021 15:08:46: #2 predicted fragment length is 200 bps INFO @ Sat, 11 Dec 2021 15:08:46: #2 alternative fragment length(s) may be 200 bps INFO @ Sat, 11 Dec 2021 15:08:46: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX9008836/SRX9008836.10_model.r WARNING @ Sat, 11 Dec 2021 15:08:46: #2 Since the d (200) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 11 Dec 2021 15:08:46: #2 You may need to consider one of the other alternative d(s): 200 WARNING @ Sat, 11 Dec 2021 15:08:46: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 11 Dec 2021 15:08:46: #3 Call peaks... INFO @ Sat, 11 Dec 2021 15:08:46: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 11 Dec 2021 15:08:52: #3 Call peaks for each chromosome... INFO @ Sat, 11 Dec 2021 15:08:54: 40000000 INFO @ Sat, 11 Dec 2021 15:09:03: 41000000 INFO @ Sat, 11 Dec 2021 15:09:10: #1 tag size is determined as 101 bps INFO @ Sat, 11 Dec 2021 15:09:10: #1 tag size = 101 INFO @ Sat, 11 Dec 2021 15:09:10: #1 total tags in treatment: 17235125 INFO @ Sat, 11 Dec 2021 15:09:10: #1 user defined the maximum tags... INFO @ Sat, 11 Dec 2021 15:09:10: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 11 Dec 2021 15:09:10: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX9008836/SRX9008836.05_peaks.xls INFO @ Sat, 11 Dec 2021 15:09:10: #1 tags after filtering in treatment: 15883742 INFO @ Sat, 11 Dec 2021 15:09:10: #1 Redundant rate of treatment: 0.08 INFO @ Sat, 11 Dec 2021 15:09:10: #1 finished! INFO @ Sat, 11 Dec 2021 15:09:10: #2 Build Peak Model... INFO @ Sat, 11 Dec 2021 15:09:10: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 11 Dec 2021 15:09:10: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX9008836/SRX9008836.05_peaks.narrowPeak INFO @ Sat, 11 Dec 2021 15:09:10: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX9008836/SRX9008836.05_summits.bed INFO @ Sat, 11 Dec 2021 15:09:10: Done! pass1 - making usageList (15 chroms): 2 millis pass2 - checking and writing primary data (9075 records, 4 fields): 13 millis CompletedMACS2peakCalling INFO @ Sat, 11 Dec 2021 15:09:11: #2 number of paired peaks: 917 WARNING @ Sat, 11 Dec 2021 15:09:11: Fewer paired peaks (917) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 917 pairs to build model! INFO @ Sat, 11 Dec 2021 15:09:11: start model_add_line... INFO @ Sat, 11 Dec 2021 15:09:11: start X-correlation... INFO @ Sat, 11 Dec 2021 15:09:11: end of X-cor INFO @ Sat, 11 Dec 2021 15:09:11: #2 finished! INFO @ Sat, 11 Dec 2021 15:09:11: #2 predicted fragment length is 200 bps INFO @ Sat, 11 Dec 2021 15:09:11: #2 alternative fragment length(s) may be 200 bps INFO @ Sat, 11 Dec 2021 15:09:11: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX9008836/SRX9008836.20_model.r WARNING @ Sat, 11 Dec 2021 15:09:11: #2 Since the d (200) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 11 Dec 2021 15:09:11: #2 You may need to consider one of the other alternative d(s): 200 WARNING @ Sat, 11 Dec 2021 15:09:11: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 11 Dec 2021 15:09:11: #3 Call peaks... INFO @ Sat, 11 Dec 2021 15:09:11: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 11 Dec 2021 15:09:22: #3 Call peaks for each chromosome... INFO @ Sat, 11 Dec 2021 15:09:40: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX9008836/SRX9008836.10_peaks.xls INFO @ Sat, 11 Dec 2021 15:09:40: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX9008836/SRX9008836.10_peaks.narrowPeak INFO @ Sat, 11 Dec 2021 15:09:40: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX9008836/SRX9008836.10_summits.bed INFO @ Sat, 11 Dec 2021 15:09:40: Done! pass1 - making usageList (15 chroms): 1 millis pass2 - checking and writing primary data (4994 records, 4 fields): 9 millis CompletedMACS2peakCalling INFO @ Sat, 11 Dec 2021 15:09:48: #3 Call peaks for each chromosome... INFO @ Sat, 11 Dec 2021 15:10:05: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX9008836/SRX9008836.20_peaks.xls INFO @ Sat, 11 Dec 2021 15:10:05: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX9008836/SRX9008836.20_peaks.narrowPeak INFO @ Sat, 11 Dec 2021 15:10:05: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX9008836/SRX9008836.20_summits.bed INFO @ Sat, 11 Dec 2021 15:10:05: Done! pass1 - making usageList (14 chroms): 0 millis pass2 - checking and writing primary data (2240 records, 4 fields): 5 millis CompletedMACS2peakCalling