Job ID = 14166947 SRX = SRX8755946 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 30194310 spots for SRR12248083/SRR12248083.sra Written 30194310 spots for SRR12248083/SRR12248083.sra fastq に変換しました。 bowtie でマッピング中... Your job 14167352 ("srTdm6") has been submitted Time loading reference: 00:00:01 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:38:47 30194310 reads; of these: 30194310 (100.00%) were paired; of these: 8666556 (28.70%) aligned concordantly 0 times 19372101 (64.16%) aligned concordantly exactly 1 time 2155653 (7.14%) aligned concordantly >1 times ---- 8666556 pairs aligned concordantly 0 times; of these: 3356688 (38.73%) aligned discordantly 1 time ---- 5309868 pairs aligned 0 times concordantly or discordantly; of these: 10619736 mates make up the pairs; of these: 8677281 (81.71%) aligned 0 times 1266381 (11.92%) aligned exactly 1 time 676074 (6.37%) aligned >1 times 85.63% overall alignment rate Time searching: 00:38:49 Overall time: 00:38:49 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 24 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 3625116 / 24487271 = 0.1480 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 10 Dec 2021 09:05:25: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX8755946/SRX8755946.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX8755946/SRX8755946.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX8755946/SRX8755946.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX8755946/SRX8755946.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 10 Dec 2021 09:05:25: #1 read tag files... INFO @ Fri, 10 Dec 2021 09:05:25: #1 read treatment tags... INFO @ Fri, 10 Dec 2021 09:05:31: 1000000 INFO @ Fri, 10 Dec 2021 09:05:37: 2000000 INFO @ Fri, 10 Dec 2021 09:05:42: 3000000 INFO @ Fri, 10 Dec 2021 09:05:48: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 10 Dec 2021 09:05:54: 5000000 INFO @ Fri, 10 Dec 2021 09:05:58: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX8755946/SRX8755946.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX8755946/SRX8755946.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX8755946/SRX8755946.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX8755946/SRX8755946.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 10 Dec 2021 09:05:58: #1 read tag files... INFO @ Fri, 10 Dec 2021 09:05:58: #1 read treatment tags... INFO @ Fri, 10 Dec 2021 09:06:01: 6000000 INFO @ Fri, 10 Dec 2021 09:06:04: 1000000 INFO @ Fri, 10 Dec 2021 09:06:07: 7000000 INFO @ Fri, 10 Dec 2021 09:06:10: 2000000 INFO @ Fri, 10 Dec 2021 09:06:13: 8000000 INFO @ Fri, 10 Dec 2021 09:06:17: 3000000 INFO @ Fri, 10 Dec 2021 09:06:19: 9000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 10 Dec 2021 09:06:23: 4000000 INFO @ Fri, 10 Dec 2021 09:06:26: 10000000 INFO @ Fri, 10 Dec 2021 09:06:27: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX8755946/SRX8755946.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX8755946/SRX8755946.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX8755946/SRX8755946.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX8755946/SRX8755946.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 10 Dec 2021 09:06:27: #1 read tag files... INFO @ Fri, 10 Dec 2021 09:06:27: #1 read treatment tags... INFO @ Fri, 10 Dec 2021 09:06:30: 5000000 INFO @ Fri, 10 Dec 2021 09:06:33: 11000000 INFO @ Fri, 10 Dec 2021 09:06:35: 1000000 INFO @ Fri, 10 Dec 2021 09:06:38: 6000000 INFO @ Fri, 10 Dec 2021 09:06:40: 12000000 INFO @ Fri, 10 Dec 2021 09:06:41: 2000000 INFO @ Fri, 10 Dec 2021 09:06:45: 7000000 INFO @ Fri, 10 Dec 2021 09:06:47: 13000000 INFO @ Fri, 10 Dec 2021 09:06:48: 3000000 INFO @ Fri, 10 Dec 2021 09:06:52: 8000000 INFO @ Fri, 10 Dec 2021 09:06:54: 14000000 INFO @ Fri, 10 Dec 2021 09:06:55: 4000000 INFO @ Fri, 10 Dec 2021 09:06:59: 9000000 INFO @ Fri, 10 Dec 2021 09:07:02: 15000000 INFO @ Fri, 10 Dec 2021 09:07:02: 5000000 INFO @ Fri, 10 Dec 2021 09:07:06: 10000000 INFO @ Fri, 10 Dec 2021 09:07:08: 16000000 INFO @ Fri, 10 Dec 2021 09:07:09: 6000000 INFO @ Fri, 10 Dec 2021 09:07:13: 11000000 INFO @ Fri, 10 Dec 2021 09:07:16: 17000000 INFO @ Fri, 10 Dec 2021 09:07:16: 7000000 INFO @ Fri, 10 Dec 2021 09:07:20: 12000000 INFO @ Fri, 10 Dec 2021 09:07:22: 18000000 INFO @ Fri, 10 Dec 2021 09:07:23: 8000000 INFO @ Fri, 10 Dec 2021 09:07:27: 13000000 INFO @ Fri, 10 Dec 2021 09:07:29: 19000000 INFO @ Fri, 10 Dec 2021 09:07:29: 9000000 INFO @ Fri, 10 Dec 2021 09:07:34: 14000000 INFO @ Fri, 10 Dec 2021 09:07:37: 10000000 INFO @ Fri, 10 Dec 2021 09:07:37: 20000000 INFO @ Fri, 10 Dec 2021 09:07:42: 15000000 INFO @ Fri, 10 Dec 2021 09:07:44: 11000000 INFO @ Fri, 10 Dec 2021 09:07:44: 21000000 INFO @ Fri, 10 Dec 2021 09:07:49: 16000000 INFO @ Fri, 10 Dec 2021 09:07:50: 22000000 INFO @ Fri, 10 Dec 2021 09:07:51: 12000000 INFO @ Fri, 10 Dec 2021 09:07:59: 13000000 INFO @ Fri, 10 Dec 2021 09:07:57: 17000000 INFO @ Fri, 10 Dec 2021 09:07:59: 23000000 INFO @ Fri, 10 Dec 2021 09:08:06: 18000000 INFO @ Fri, 10 Dec 2021 09:08:06: 14000000 INFO @ Fri, 10 Dec 2021 09:08:06: 24000000 INFO @ Fri, 10 Dec 2021 09:08:12: 19000000 INFO @ Fri, 10 Dec 2021 09:08:13: 15000000 INFO @ Fri, 10 Dec 2021 09:08:13: 25000000 INFO @ Fri, 10 Dec 2021 09:08:19: 20000000 INFO @ Fri, 10 Dec 2021 09:08:20: 16000000 INFO @ Fri, 10 Dec 2021 09:08:20: 26000000 INFO @ Fri, 10 Dec 2021 09:08:26: 21000000 INFO @ Fri, 10 Dec 2021 09:08:27: 17000000 INFO @ Fri, 10 Dec 2021 09:08:27: 27000000 INFO @ Fri, 10 Dec 2021 09:08:33: 22000000 INFO @ Fri, 10 Dec 2021 09:08:34: 28000000 INFO @ Fri, 10 Dec 2021 09:08:34: 18000000 INFO @ Fri, 10 Dec 2021 09:08:40: 29000000 INFO @ Fri, 10 Dec 2021 09:08:40: 23000000 INFO @ Fri, 10 Dec 2021 09:08:41: 19000000 INFO @ Fri, 10 Dec 2021 09:08:47: 30000000 INFO @ Fri, 10 Dec 2021 09:08:47: 24000000 INFO @ Fri, 10 Dec 2021 09:08:48: 20000000 INFO @ Fri, 10 Dec 2021 09:08:54: 31000000 INFO @ Fri, 10 Dec 2021 09:08:55: 25000000 INFO @ Fri, 10 Dec 2021 09:08:55: 21000000 INFO @ Fri, 10 Dec 2021 09:09:00: 32000000 INFO @ Fri, 10 Dec 2021 09:09:01: 26000000 INFO @ Fri, 10 Dec 2021 09:09:01: 22000000 INFO @ Fri, 10 Dec 2021 09:09:07: 33000000 INFO @ Fri, 10 Dec 2021 09:09:09: 27000000 INFO @ Fri, 10 Dec 2021 09:09:10: 23000000 INFO @ Fri, 10 Dec 2021 09:09:14: 34000000 INFO @ Fri, 10 Dec 2021 09:09:16: 28000000 INFO @ Fri, 10 Dec 2021 09:09:16: 24000000 INFO @ Fri, 10 Dec 2021 09:09:21: 35000000 INFO @ Fri, 10 Dec 2021 09:09:23: 29000000 INFO @ Fri, 10 Dec 2021 09:09:23: 25000000 INFO @ Fri, 10 Dec 2021 09:09:28: 36000000 INFO @ Fri, 10 Dec 2021 09:09:30: 30000000 INFO @ Fri, 10 Dec 2021 09:09:30: 26000000 INFO @ Fri, 10 Dec 2021 09:09:35: 37000000 INFO @ Fri, 10 Dec 2021 09:09:37: 27000000 INFO @ Fri, 10 Dec 2021 09:09:37: 31000000 INFO @ Fri, 10 Dec 2021 09:09:42: 38000000 INFO @ Fri, 10 Dec 2021 09:09:43: 28000000 INFO @ Fri, 10 Dec 2021 09:09:44: 32000000 INFO @ Fri, 10 Dec 2021 09:09:48: 39000000 INFO @ Fri, 10 Dec 2021 09:09:50: 29000000 INFO @ Fri, 10 Dec 2021 09:09:51: 33000000 INFO @ Fri, 10 Dec 2021 09:09:55: 40000000 INFO @ Fri, 10 Dec 2021 09:09:58: 30000000 INFO @ Fri, 10 Dec 2021 09:10:00: 34000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Fri, 10 Dec 2021 09:10:04: 41000000 INFO @ Fri, 10 Dec 2021 09:10:06: 31000000 INFO @ Fri, 10 Dec 2021 09:10:07: 35000000 INFO @ Fri, 10 Dec 2021 09:10:10: 42000000 INFO @ Fri, 10 Dec 2021 09:10:13: 32000000 INFO @ Fri, 10 Dec 2021 09:10:14: 36000000 INFO @ Fri, 10 Dec 2021 09:10:16: 43000000 INFO @ Fri, 10 Dec 2021 09:10:20: 33000000 INFO @ Fri, 10 Dec 2021 09:10:21: 37000000 INFO @ Fri, 10 Dec 2021 09:10:23: 44000000 INFO @ Fri, 10 Dec 2021 09:10:27: #1 tag size is determined as 51 bps INFO @ Fri, 10 Dec 2021 09:10:27: #1 tag size = 51 INFO @ Fri, 10 Dec 2021 09:10:27: #1 total tags in treatment: 18594827 INFO @ Fri, 10 Dec 2021 09:10:27: #1 user defined the maximum tags... INFO @ Fri, 10 Dec 2021 09:10:27: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 10 Dec 2021 09:10:27: #1 tags after filtering in treatment: 11689223 INFO @ Fri, 10 Dec 2021 09:10:27: #1 Redundant rate of treatment: 0.37 INFO @ Fri, 10 Dec 2021 09:10:27: #1 finished! INFO @ Fri, 10 Dec 2021 09:10:27: #2 Build Peak Model... INFO @ Fri, 10 Dec 2021 09:10:27: 34000000 INFO @ Fri, 10 Dec 2021 09:10:27: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 10 Dec 2021 09:10:28: 38000000 INFO @ Fri, 10 Dec 2021 09:10:28: #2 number of paired peaks: 3331 INFO @ Fri, 10 Dec 2021 09:10:28: start model_add_line... INFO @ Fri, 10 Dec 2021 09:10:28: start X-correlation... INFO @ Fri, 10 Dec 2021 09:10:29: end of X-cor INFO @ Fri, 10 Dec 2021 09:10:29: #2 finished! INFO @ Fri, 10 Dec 2021 09:10:29: #2 predicted fragment length is 64 bps INFO @ Fri, 10 Dec 2021 09:10:29: #2 alternative fragment length(s) may be 64 bps INFO @ Fri, 10 Dec 2021 09:10:29: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX8755946/SRX8755946.05_model.r WARNING @ Fri, 10 Dec 2021 09:10:29: #2 Since the d (64) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 10 Dec 2021 09:10:29: #2 You may need to consider one of the other alternative d(s): 64 WARNING @ Fri, 10 Dec 2021 09:10:29: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 10 Dec 2021 09:10:29: #3 Call peaks... INFO @ Fri, 10 Dec 2021 09:10:29: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 10 Dec 2021 09:10:34: 35000000 INFO @ Fri, 10 Dec 2021 09:10:34: 39000000 INFO @ Fri, 10 Dec 2021 09:10:41: 36000000 INFO @ Fri, 10 Dec 2021 09:10:41: 40000000 INFO @ Fri, 10 Dec 2021 09:10:47: 37000000 INFO @ Fri, 10 Dec 2021 09:10:48: 41000000 INFO @ Fri, 10 Dec 2021 09:10:54: #3 Call peaks for each chromosome... INFO @ Fri, 10 Dec 2021 09:10:54: 42000000 INFO @ Fri, 10 Dec 2021 09:10:54: 38000000 INFO @ Fri, 10 Dec 2021 09:11:01: 43000000 INFO @ Fri, 10 Dec 2021 09:11:01: 39000000 INFO @ Fri, 10 Dec 2021 09:11:08: 44000000 INFO @ Fri, 10 Dec 2021 09:11:08: 40000000 INFO @ Fri, 10 Dec 2021 09:11:11: #1 tag size is determined as 51 bps INFO @ Fri, 10 Dec 2021 09:11:11: #1 tag size = 51 INFO @ Fri, 10 Dec 2021 09:11:11: #1 total tags in treatment: 18594827 INFO @ Fri, 10 Dec 2021 09:11:11: #1 user defined the maximum tags... INFO @ Fri, 10 Dec 2021 09:11:11: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 10 Dec 2021 09:11:12: #1 tags after filtering in treatment: 11689223 INFO @ Fri, 10 Dec 2021 09:11:12: #1 Redundant rate of treatment: 0.37 INFO @ Fri, 10 Dec 2021 09:11:12: #1 finished! INFO @ Fri, 10 Dec 2021 09:11:12: #2 Build Peak Model... INFO @ Fri, 10 Dec 2021 09:11:12: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 10 Dec 2021 09:11:12: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX8755946/SRX8755946.05_peaks.xls INFO @ Fri, 10 Dec 2021 09:11:12: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX8755946/SRX8755946.05_peaks.narrowPeak INFO @ Fri, 10 Dec 2021 09:11:13: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX8755946/SRX8755946.05_summits.bed INFO @ Fri, 10 Dec 2021 09:11:13: Done! INFO @ Fri, 10 Dec 2021 09:11:13: #2 number of paired peaks: 3331 INFO @ Fri, 10 Dec 2021 09:11:13: start model_add_line... INFO @ Fri, 10 Dec 2021 09:11:13: start X-correlation... INFO @ Fri, 10 Dec 2021 09:11:13: end of X-cor INFO @ Fri, 10 Dec 2021 09:11:13: #2 finished! INFO @ Fri, 10 Dec 2021 09:11:13: #2 predicted fragment length is 64 bps INFO @ Fri, 10 Dec 2021 09:11:13: #2 alternative fragment length(s) may be 64 bps INFO @ Fri, 10 Dec 2021 09:11:13: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX8755946/SRX8755946.10_model.r WARNING @ Fri, 10 Dec 2021 09:11:13: #2 Since the d (64) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 10 Dec 2021 09:11:13: #2 You may need to consider one of the other alternative d(s): 64 WARNING @ Fri, 10 Dec 2021 09:11:13: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 10 Dec 2021 09:11:13: #3 Call peaks... INFO @ Fri, 10 Dec 2021 09:11:13: #3 Pre-compute pvalue-qvalue table... pass1 - making usageList (14 chroms): 4 millis pass2 - checking and writing primary data (21523 records, 4 fields): 27 millis CompletedMACS2peakCalling INFO @ Fri, 10 Dec 2021 09:11:14: 41000000 BigWig に変換しました。 INFO @ Fri, 10 Dec 2021 09:11:21: 42000000 INFO @ Fri, 10 Dec 2021 09:11:27: 43000000 INFO @ Fri, 10 Dec 2021 09:11:33: 44000000 INFO @ Fri, 10 Dec 2021 09:11:36: #1 tag size is determined as 51 bps INFO @ Fri, 10 Dec 2021 09:11:36: #1 tag size = 51 INFO @ Fri, 10 Dec 2021 09:11:36: #1 total tags in treatment: 18594827 INFO @ Fri, 10 Dec 2021 09:11:36: #1 user defined the maximum tags... INFO @ Fri, 10 Dec 2021 09:11:36: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 10 Dec 2021 09:11:37: #1 tags after filtering in treatment: 11689223 INFO @ Fri, 10 Dec 2021 09:11:37: #1 Redundant rate of treatment: 0.37 INFO @ Fri, 10 Dec 2021 09:11:37: #1 finished! INFO @ Fri, 10 Dec 2021 09:11:37: #2 Build Peak Model... INFO @ Fri, 10 Dec 2021 09:11:37: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 10 Dec 2021 09:11:38: #2 number of paired peaks: 3331 INFO @ Fri, 10 Dec 2021 09:11:38: start model_add_line... INFO @ Fri, 10 Dec 2021 09:11:38: start X-correlation... INFO @ Fri, 10 Dec 2021 09:11:38: #3 Call peaks for each chromosome... INFO @ Fri, 10 Dec 2021 09:11:38: end of X-cor INFO @ Fri, 10 Dec 2021 09:11:38: #2 finished! INFO @ Fri, 10 Dec 2021 09:11:38: #2 predicted fragment length is 64 bps INFO @ Fri, 10 Dec 2021 09:11:38: #2 alternative fragment length(s) may be 64 bps INFO @ Fri, 10 Dec 2021 09:11:38: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX8755946/SRX8755946.20_model.r WARNING @ Fri, 10 Dec 2021 09:11:38: #2 Since the d (64) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 10 Dec 2021 09:11:38: #2 You may need to consider one of the other alternative d(s): 64 WARNING @ Fri, 10 Dec 2021 09:11:38: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 10 Dec 2021 09:11:38: #3 Call peaks... INFO @ Fri, 10 Dec 2021 09:11:38: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 10 Dec 2021 09:11:54: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX8755946/SRX8755946.10_peaks.xls INFO @ Fri, 10 Dec 2021 09:11:54: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX8755946/SRX8755946.10_peaks.narrowPeak INFO @ Fri, 10 Dec 2021 09:11:54: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX8755946/SRX8755946.10_summits.bed INFO @ Fri, 10 Dec 2021 09:11:54: Done! pass1 - making usageList (13 chroms): 2 millis pass2 - checking and writing primary data (12969 records, 4 fields): 17 millis CompletedMACS2peakCalling INFO @ Fri, 10 Dec 2021 09:12:02: #3 Call peaks for each chromosome... INFO @ Fri, 10 Dec 2021 09:12:18: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX8755946/SRX8755946.20_peaks.xls INFO @ Fri, 10 Dec 2021 09:12:18: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX8755946/SRX8755946.20_peaks.narrowPeak INFO @ Fri, 10 Dec 2021 09:12:18: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX8755946/SRX8755946.20_summits.bed INFO @ Fri, 10 Dec 2021 09:12:18: Done! pass1 - making usageList (13 chroms): 1 millis pass2 - checking and writing primary data (4240 records, 4 fields): 7 millis CompletedMACS2peakCalling