Job ID = 12266643 SRX = SRX7572785 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 50622168 spots for SRR10904632/SRR10904632.sra Written 50622168 spots for SRR10904632/SRR10904632.sra fastq に変換しました。 bowtie でマッピング中... Your job 12272565 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:01 Time loading mirror index: 00:00:00 Multiseed full-index search: 03:40:57 50622168 reads; of these: 50622168 (100.00%) were paired; of these: 22044329 (43.55%) aligned concordantly 0 times 18993780 (37.52%) aligned concordantly exactly 1 time 9584059 (18.93%) aligned concordantly >1 times ---- 22044329 pairs aligned concordantly 0 times; of these: 5081775 (23.05%) aligned discordantly 1 time ---- 16962554 pairs aligned 0 times concordantly or discordantly; of these: 33925108 mates make up the pairs; of these: 26595613 (78.40%) aligned 0 times 1061554 (3.13%) aligned exactly 1 time 6267941 (18.48%) aligned >1 times 73.73% overall alignment rate Time searching: 03:40:58 Overall time: 03:40:58 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 56 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 14016801 / 33334255 = 0.4205 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 13:24:27: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX7572785/SRX7572785.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX7572785/SRX7572785.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX7572785/SRX7572785.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX7572785/SRX7572785.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 13:24:27: #1 read tag files... INFO @ Sat, 03 Apr 2021 13:24:27: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 13:24:39: 1000000 INFO @ Sat, 03 Apr 2021 13:24:52: 2000000 WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 13:24:56: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX7572785/SRX7572785.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX7572785/SRX7572785.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX7572785/SRX7572785.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX7572785/SRX7572785.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 13:24:56: #1 read tag files... INFO @ Sat, 03 Apr 2021 13:24:56: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 13:25:06: 3000000 INFO @ Sat, 03 Apr 2021 13:25:10: 1000000 INFO @ Sat, 03 Apr 2021 13:25:20: 4000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 13:25:24: 2000000 INFO @ Sat, 03 Apr 2021 13:25:26: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX7572785/SRX7572785.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX7572785/SRX7572785.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX7572785/SRX7572785.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX7572785/SRX7572785.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 13:25:26: #1 read tag files... INFO @ Sat, 03 Apr 2021 13:25:26: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 13:25:35: 5000000 INFO @ Sat, 03 Apr 2021 13:25:39: 3000000 INFO @ Sat, 03 Apr 2021 13:25:40: 1000000 INFO @ Sat, 03 Apr 2021 13:25:49: 6000000 INFO @ Sat, 03 Apr 2021 13:25:53: 4000000 INFO @ Sat, 03 Apr 2021 13:25:54: 2000000 INFO @ Sat, 03 Apr 2021 13:26:01: 7000000 INFO @ Sat, 03 Apr 2021 13:26:07: 5000000 INFO @ Sat, 03 Apr 2021 13:26:08: 3000000 INFO @ Sat, 03 Apr 2021 13:26:14: 8000000 INFO @ Sat, 03 Apr 2021 13:26:21: 6000000 INFO @ Sat, 03 Apr 2021 13:26:23: 4000000 INFO @ Sat, 03 Apr 2021 13:26:26: 9000000 INFO @ Sat, 03 Apr 2021 13:26:33: 7000000 INFO @ Sat, 03 Apr 2021 13:26:37: 5000000 INFO @ Sat, 03 Apr 2021 13:26:38: 10000000 INFO @ Sat, 03 Apr 2021 13:26:47: 8000000 INFO @ Sat, 03 Apr 2021 13:26:51: 6000000 INFO @ Sat, 03 Apr 2021 13:26:51: 11000000 INFO @ Sat, 03 Apr 2021 13:26:59: 9000000 INFO @ Sat, 03 Apr 2021 13:27:04: 12000000 INFO @ Sat, 03 Apr 2021 13:27:04: 7000000 INFO @ Sat, 03 Apr 2021 13:27:12: 10000000 INFO @ Sat, 03 Apr 2021 13:27:17: 13000000 INFO @ Sat, 03 Apr 2021 13:27:17: 8000000 INFO @ Sat, 03 Apr 2021 13:27:24: 11000000 INFO @ Sat, 03 Apr 2021 13:27:29: 14000000 INFO @ Sat, 03 Apr 2021 13:27:29: 9000000 INFO @ Sat, 03 Apr 2021 13:27:37: 12000000 INFO @ Sat, 03 Apr 2021 13:27:42: 15000000 INFO @ Sat, 03 Apr 2021 13:27:42: 10000000 INFO @ Sat, 03 Apr 2021 13:27:50: 13000000 INFO @ Sat, 03 Apr 2021 13:27:55: 16000000 INFO @ Sat, 03 Apr 2021 13:27:55: 11000000 INFO @ Sat, 03 Apr 2021 13:28:02: 14000000 INFO @ Sat, 03 Apr 2021 13:28:06: 17000000 INFO @ Sat, 03 Apr 2021 13:28:07: 12000000 INFO @ Sat, 03 Apr 2021 13:28:14: 15000000 INFO @ Sat, 03 Apr 2021 13:28:18: 18000000 INFO @ Sat, 03 Apr 2021 13:28:19: 13000000 INFO @ Sat, 03 Apr 2021 13:28:26: 16000000 INFO @ Sat, 03 Apr 2021 13:28:29: 19000000 INFO @ Sat, 03 Apr 2021 13:28:30: 14000000 INFO @ Sat, 03 Apr 2021 13:28:36: 17000000 INFO @ Sat, 03 Apr 2021 13:28:40: 20000000 INFO @ Sat, 03 Apr 2021 13:28:42: 15000000 INFO @ Sat, 03 Apr 2021 13:28:47: 18000000 INFO @ Sat, 03 Apr 2021 13:28:52: 21000000 INFO @ Sat, 03 Apr 2021 13:28:53: 16000000 INFO @ Sat, 03 Apr 2021 13:28:58: 19000000 INFO @ Sat, 03 Apr 2021 13:29:03: 22000000 INFO @ Sat, 03 Apr 2021 13:29:04: 17000000 INFO @ Sat, 03 Apr 2021 13:29:09: 20000000 INFO @ Sat, 03 Apr 2021 13:29:14: 23000000 INFO @ Sat, 03 Apr 2021 13:29:15: 18000000 INFO @ Sat, 03 Apr 2021 13:29:21: 21000000 INFO @ Sat, 03 Apr 2021 13:29:25: 24000000 INFO @ Sat, 03 Apr 2021 13:29:26: 19000000 INFO @ Sat, 03 Apr 2021 13:29:32: 22000000 INFO @ Sat, 03 Apr 2021 13:29:36: 25000000 INFO @ Sat, 03 Apr 2021 13:29:37: 20000000 INFO @ Sat, 03 Apr 2021 13:29:43: 23000000 INFO @ Sat, 03 Apr 2021 13:29:47: 26000000 INFO @ Sat, 03 Apr 2021 13:29:49: 21000000 INFO @ Sat, 03 Apr 2021 13:29:54: 24000000 INFO @ Sat, 03 Apr 2021 13:29:58: 27000000 INFO @ Sat, 03 Apr 2021 13:30:00: 22000000 INFO @ Sat, 03 Apr 2021 13:30:05: 25000000 INFO @ Sat, 03 Apr 2021 13:30:09: 28000000 INFO @ Sat, 03 Apr 2021 13:30:11: 23000000 INFO @ Sat, 03 Apr 2021 13:30:16: 26000000 INFO @ Sat, 03 Apr 2021 13:30:21: 29000000 INFO @ Sat, 03 Apr 2021 13:30:22: 24000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sat, 03 Apr 2021 13:30:27: 27000000 INFO @ Sat, 03 Apr 2021 13:30:31: 30000000 INFO @ Sat, 03 Apr 2021 13:30:33: 25000000 INFO @ Sat, 03 Apr 2021 13:30:38: 28000000 INFO @ Sat, 03 Apr 2021 13:30:42: 31000000 INFO @ Sat, 03 Apr 2021 13:30:44: 26000000 INFO @ Sat, 03 Apr 2021 13:30:49: 29000000 INFO @ Sat, 03 Apr 2021 13:30:53: 32000000 INFO @ Sat, 03 Apr 2021 13:30:55: 27000000 INFO @ Sat, 03 Apr 2021 13:31:00: 30000000 INFO @ Sat, 03 Apr 2021 13:31:04: 33000000 INFO @ Sat, 03 Apr 2021 13:31:06: 28000000 INFO @ Sat, 03 Apr 2021 13:31:10: 31000000 INFO @ Sat, 03 Apr 2021 13:31:15: 34000000 INFO @ Sat, 03 Apr 2021 13:31:17: 29000000 INFO @ Sat, 03 Apr 2021 13:31:20: 32000000 INFO @ Sat, 03 Apr 2021 13:31:25: 35000000 INFO @ Sat, 03 Apr 2021 13:31:28: 30000000 INFO @ Sat, 03 Apr 2021 13:31:32: 33000000 INFO @ Sat, 03 Apr 2021 13:31:37: 36000000 INFO @ Sat, 03 Apr 2021 13:31:39: 31000000 INFO @ Sat, 03 Apr 2021 13:31:43: 34000000 INFO @ Sat, 03 Apr 2021 13:31:48: 37000000 INFO @ Sat, 03 Apr 2021 13:31:50: 32000000 BigWig に変換しました。 INFO @ Sat, 03 Apr 2021 13:31:53: 35000000 INFO @ Sat, 03 Apr 2021 13:31:59: 38000000 INFO @ Sat, 03 Apr 2021 13:32:01: 33000000 INFO @ Sat, 03 Apr 2021 13:32:04: 36000000 INFO @ Sat, 03 Apr 2021 13:32:11: 39000000 INFO @ Sat, 03 Apr 2021 13:32:12: 34000000 INFO @ Sat, 03 Apr 2021 13:32:16: 37000000 INFO @ Sat, 03 Apr 2021 13:32:22: 40000000 INFO @ Sat, 03 Apr 2021 13:32:23: 35000000 INFO @ Sat, 03 Apr 2021 13:32:27: 38000000 INFO @ Sat, 03 Apr 2021 13:32:34: 41000000 INFO @ Sat, 03 Apr 2021 13:32:34: 36000000 INFO @ Sat, 03 Apr 2021 13:32:39: 39000000 INFO @ Sat, 03 Apr 2021 13:32:45: 42000000 INFO @ Sat, 03 Apr 2021 13:32:46: 37000000 INFO @ Sat, 03 Apr 2021 13:32:50: 40000000 INFO @ Sat, 03 Apr 2021 13:32:57: 38000000 INFO @ Sat, 03 Apr 2021 13:32:57: 43000000 INFO @ Sat, 03 Apr 2021 13:33:01: 41000000 INFO @ Sat, 03 Apr 2021 13:33:09: 39000000 INFO @ Sat, 03 Apr 2021 13:33:10: 44000000 INFO @ Sat, 03 Apr 2021 13:33:13: 42000000 INFO @ Sat, 03 Apr 2021 13:33:20: 40000000 INFO @ Sat, 03 Apr 2021 13:33:21: 45000000 INFO @ Sat, 03 Apr 2021 13:33:25: 43000000 INFO @ Sat, 03 Apr 2021 13:33:31: 41000000 INFO @ Sat, 03 Apr 2021 13:33:32: 46000000 INFO @ Sat, 03 Apr 2021 13:33:36: 44000000 INFO @ Sat, 03 Apr 2021 13:33:39: #1 tag size is determined as 151 bps INFO @ Sat, 03 Apr 2021 13:33:39: #1 tag size = 151 INFO @ Sat, 03 Apr 2021 13:33:39: #1 total tags in treatment: 16349762 INFO @ Sat, 03 Apr 2021 13:33:39: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 13:33:39: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 13:33:40: #1 tags after filtering in treatment: 12712474 INFO @ Sat, 03 Apr 2021 13:33:40: #1 Redundant rate of treatment: 0.22 INFO @ Sat, 03 Apr 2021 13:33:40: #1 finished! INFO @ Sat, 03 Apr 2021 13:33:40: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 13:33:40: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 13:33:41: #2 number of paired peaks: 447 WARNING @ Sat, 03 Apr 2021 13:33:41: Fewer paired peaks (447) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 447 pairs to build model! INFO @ Sat, 03 Apr 2021 13:33:41: start model_add_line... INFO @ Sat, 03 Apr 2021 13:33:41: start X-correlation... INFO @ Sat, 03 Apr 2021 13:33:41: end of X-cor INFO @ Sat, 03 Apr 2021 13:33:41: #2 finished! INFO @ Sat, 03 Apr 2021 13:33:41: #2 predicted fragment length is 213 bps INFO @ Sat, 03 Apr 2021 13:33:41: #2 alternative fragment length(s) may be 213 bps INFO @ Sat, 03 Apr 2021 13:33:41: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX7572785/SRX7572785.05_model.r WARNING @ Sat, 03 Apr 2021 13:33:41: #2 Since the d (213) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 13:33:41: #2 You may need to consider one of the other alternative d(s): 213 WARNING @ Sat, 03 Apr 2021 13:33:41: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 13:33:41: #3 Call peaks... INFO @ Sat, 03 Apr 2021 13:33:41: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 13:33:42: 42000000 INFO @ Sat, 03 Apr 2021 13:33:46: 45000000 INFO @ Sat, 03 Apr 2021 13:33:52: 43000000 INFO @ Sat, 03 Apr 2021 13:33:56: 46000000 INFO @ Sat, 03 Apr 2021 13:34:03: #1 tag size is determined as 151 bps INFO @ Sat, 03 Apr 2021 13:34:03: #1 tag size = 151 INFO @ Sat, 03 Apr 2021 13:34:03: #1 total tags in treatment: 16349762 INFO @ Sat, 03 Apr 2021 13:34:03: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 13:34:03: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 13:34:03: 44000000 INFO @ Sat, 03 Apr 2021 13:34:03: #1 tags after filtering in treatment: 12712474 INFO @ Sat, 03 Apr 2021 13:34:03: #1 Redundant rate of treatment: 0.22 INFO @ Sat, 03 Apr 2021 13:34:03: #1 finished! INFO @ Sat, 03 Apr 2021 13:34:03: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 13:34:03: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 13:34:04: #2 number of paired peaks: 447 WARNING @ Sat, 03 Apr 2021 13:34:04: Fewer paired peaks (447) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 447 pairs to build model! INFO @ Sat, 03 Apr 2021 13:34:04: start model_add_line... INFO @ Sat, 03 Apr 2021 13:34:04: start X-correlation... INFO @ Sat, 03 Apr 2021 13:34:04: end of X-cor INFO @ Sat, 03 Apr 2021 13:34:04: #2 finished! INFO @ Sat, 03 Apr 2021 13:34:04: #2 predicted fragment length is 213 bps INFO @ Sat, 03 Apr 2021 13:34:04: #2 alternative fragment length(s) may be 213 bps INFO @ Sat, 03 Apr 2021 13:34:04: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX7572785/SRX7572785.10_model.r WARNING @ Sat, 03 Apr 2021 13:34:04: #2 Since the d (213) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 13:34:04: #2 You may need to consider one of the other alternative d(s): 213 WARNING @ Sat, 03 Apr 2021 13:34:04: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 13:34:04: #3 Call peaks... INFO @ Sat, 03 Apr 2021 13:34:04: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 13:34:08: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 13:34:12: 45000000 INFO @ Sat, 03 Apr 2021 13:34:21: 46000000 INFO @ Sat, 03 Apr 2021 13:34:22: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX7572785/SRX7572785.05_peaks.xls INFO @ Sat, 03 Apr 2021 13:34:22: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX7572785/SRX7572785.05_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 13:34:22: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX7572785/SRX7572785.05_summits.bed INFO @ Sat, 03 Apr 2021 13:34:22: Done! pass1 - making usageList (15 chroms): 2 millis pass2 - checking and writing primary data (7303 records, 4 fields): 10 millis CompletedMACS2peakCalling INFO @ Sat, 03 Apr 2021 13:34:26: #1 tag size is determined as 151 bps INFO @ Sat, 03 Apr 2021 13:34:26: #1 tag size = 151 INFO @ Sat, 03 Apr 2021 13:34:26: #1 total tags in treatment: 16349762 INFO @ Sat, 03 Apr 2021 13:34:26: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 13:34:26: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 13:34:27: #1 tags after filtering in treatment: 12712474 INFO @ Sat, 03 Apr 2021 13:34:27: #1 Redundant rate of treatment: 0.22 INFO @ Sat, 03 Apr 2021 13:34:27: #1 finished! INFO @ Sat, 03 Apr 2021 13:34:27: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 13:34:27: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 13:34:28: #2 number of paired peaks: 447 WARNING @ Sat, 03 Apr 2021 13:34:28: Fewer paired peaks (447) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 447 pairs to build model! INFO @ Sat, 03 Apr 2021 13:34:28: start model_add_line... INFO @ Sat, 03 Apr 2021 13:34:28: start X-correlation... INFO @ Sat, 03 Apr 2021 13:34:28: end of X-cor INFO @ Sat, 03 Apr 2021 13:34:28: #2 finished! INFO @ Sat, 03 Apr 2021 13:34:28: #2 predicted fragment length is 213 bps INFO @ Sat, 03 Apr 2021 13:34:28: #2 alternative fragment length(s) may be 213 bps INFO @ Sat, 03 Apr 2021 13:34:28: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX7572785/SRX7572785.20_model.r WARNING @ Sat, 03 Apr 2021 13:34:28: #2 Since the d (213) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 13:34:28: #2 You may need to consider one of the other alternative d(s): 213 WARNING @ Sat, 03 Apr 2021 13:34:28: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 13:34:28: #3 Call peaks... INFO @ Sat, 03 Apr 2021 13:34:28: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 13:34:31: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 13:34:44: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX7572785/SRX7572785.10_peaks.xls INFO @ Sat, 03 Apr 2021 13:34:44: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX7572785/SRX7572785.10_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 13:34:44: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX7572785/SRX7572785.10_summits.bed INFO @ Sat, 03 Apr 2021 13:34:44: Done! pass1 - making usageList (15 chroms): 1 millis pass2 - checking and writing primary data (3047 records, 4 fields): 6 millis CompletedMACS2peakCalling INFO @ Sat, 03 Apr 2021 13:34:54: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 13:35:07: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX7572785/SRX7572785.20_peaks.xls INFO @ Sat, 03 Apr 2021 13:35:07: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX7572785/SRX7572785.20_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 13:35:07: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX7572785/SRX7572785.20_summits.bed INFO @ Sat, 03 Apr 2021 13:35:07: Done! pass1 - making usageList (13 chroms): 0 millis pass2 - checking and writing primary data (1052 records, 4 fields): 16 millis CompletedMACS2peakCalling