Job ID = 12266642 SRX = SRX7572784 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 38232063 spots for SRR10904631/SRR10904631.sra Written 38232063 spots for SRR10904631/SRR10904631.sra fastq に変換しました。 bowtie でマッピング中... Your job 12271398 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 03:02:30 38232063 reads; of these: 38232063 (100.00%) were paired; of these: 17018101 (44.51%) aligned concordantly 0 times 15098543 (39.49%) aligned concordantly exactly 1 time 6115419 (16.00%) aligned concordantly >1 times ---- 17018101 pairs aligned concordantly 0 times; of these: 4164190 (24.47%) aligned discordantly 1 time ---- 12853911 pairs aligned 0 times concordantly or discordantly; of these: 25707822 mates make up the pairs; of these: 20879068 (81.22%) aligned 0 times 809998 (3.15%) aligned exactly 1 time 4018756 (15.63%) aligned >1 times 72.69% overall alignment rate Time searching: 03:02:30 Overall time: 03:02:30 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 44 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 6174569 / 25202932 = 0.2450 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 12:45:52: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX7572784/SRX7572784.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX7572784/SRX7572784.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX7572784/SRX7572784.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX7572784/SRX7572784.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 12:45:52: #1 read tag files... INFO @ Sat, 03 Apr 2021 12:45:52: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 12:45:59: 1000000 INFO @ Sat, 03 Apr 2021 12:46:06: 2000000 INFO @ Sat, 03 Apr 2021 12:46:14: 3000000 WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 12:46:21: 4000000 INFO @ Sat, 03 Apr 2021 12:46:21: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX7572784/SRX7572784.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX7572784/SRX7572784.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX7572784/SRX7572784.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX7572784/SRX7572784.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 12:46:21: #1 read tag files... INFO @ Sat, 03 Apr 2021 12:46:21: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 12:46:30: 5000000 INFO @ Sat, 03 Apr 2021 12:46:30: 1000000 INFO @ Sat, 03 Apr 2021 12:46:38: 6000000 INFO @ Sat, 03 Apr 2021 12:46:39: 2000000 INFO @ Sat, 03 Apr 2021 12:46:47: 7000000 INFO @ Sat, 03 Apr 2021 12:46:48: 3000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 12:46:51: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX7572784/SRX7572784.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX7572784/SRX7572784.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX7572784/SRX7572784.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX7572784/SRX7572784.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 12:46:51: #1 read tag files... INFO @ Sat, 03 Apr 2021 12:46:51: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 12:46:56: 8000000 INFO @ Sat, 03 Apr 2021 12:46:58: 4000000 INFO @ Sat, 03 Apr 2021 12:47:01: 1000000 INFO @ Sat, 03 Apr 2021 12:47:05: 9000000 INFO @ Sat, 03 Apr 2021 12:47:07: 5000000 INFO @ Sat, 03 Apr 2021 12:47:10: 2000000 INFO @ Sat, 03 Apr 2021 12:47:15: 10000000 INFO @ Sat, 03 Apr 2021 12:47:17: 6000000 INFO @ Sat, 03 Apr 2021 12:47:20: 3000000 INFO @ Sat, 03 Apr 2021 12:47:24: 11000000 INFO @ Sat, 03 Apr 2021 12:47:27: 7000000 INFO @ Sat, 03 Apr 2021 12:47:30: 4000000 INFO @ Sat, 03 Apr 2021 12:47:33: 12000000 INFO @ Sat, 03 Apr 2021 12:47:37: 8000000 INFO @ Sat, 03 Apr 2021 12:47:40: 5000000 INFO @ Sat, 03 Apr 2021 12:47:42: 13000000 INFO @ Sat, 03 Apr 2021 12:47:47: 9000000 INFO @ Sat, 03 Apr 2021 12:47:50: 6000000 INFO @ Sat, 03 Apr 2021 12:47:52: 14000000 INFO @ Sat, 03 Apr 2021 12:47:56: 10000000 INFO @ Sat, 03 Apr 2021 12:48:01: 7000000 INFO @ Sat, 03 Apr 2021 12:48:01: 15000000 INFO @ Sat, 03 Apr 2021 12:48:06: 11000000 INFO @ Sat, 03 Apr 2021 12:48:11: 16000000 INFO @ Sat, 03 Apr 2021 12:48:11: 8000000 INFO @ Sat, 03 Apr 2021 12:48:16: 12000000 INFO @ Sat, 03 Apr 2021 12:48:20: 17000000 INFO @ Sat, 03 Apr 2021 12:48:21: 9000000 INFO @ Sat, 03 Apr 2021 12:48:26: 13000000 INFO @ Sat, 03 Apr 2021 12:48:30: 18000000 INFO @ Sat, 03 Apr 2021 12:48:31: 10000000 INFO @ Sat, 03 Apr 2021 12:48:36: 14000000 INFO @ Sat, 03 Apr 2021 12:48:39: 19000000 INFO @ Sat, 03 Apr 2021 12:48:40: 11000000 INFO @ Sat, 03 Apr 2021 12:48:45: 15000000 INFO @ Sat, 03 Apr 2021 12:48:48: 20000000 INFO @ Sat, 03 Apr 2021 12:48:49: 12000000 INFO @ Sat, 03 Apr 2021 12:48:54: 16000000 INFO @ Sat, 03 Apr 2021 12:48:58: 21000000 INFO @ Sat, 03 Apr 2021 12:48:58: 13000000 INFO @ Sat, 03 Apr 2021 12:49:03: 17000000 INFO @ Sat, 03 Apr 2021 12:49:08: 22000000 INFO @ Sat, 03 Apr 2021 12:49:08: 14000000 INFO @ Sat, 03 Apr 2021 12:49:13: 18000000 INFO @ Sat, 03 Apr 2021 12:49:17: 23000000 INFO @ Sat, 03 Apr 2021 12:49:18: 15000000 INFO @ Sat, 03 Apr 2021 12:49:22: 19000000 INFO @ Sat, 03 Apr 2021 12:49:26: 24000000 INFO @ Sat, 03 Apr 2021 12:49:27: 16000000 INFO @ Sat, 03 Apr 2021 12:49:31: 20000000 INFO @ Sat, 03 Apr 2021 12:49:36: 25000000 INFO @ Sat, 03 Apr 2021 12:49:37: 17000000 INFO @ Sat, 03 Apr 2021 12:49:42: 21000000 INFO @ Sat, 03 Apr 2021 12:49:45: 26000000 INFO @ Sat, 03 Apr 2021 12:49:47: 18000000 INFO @ Sat, 03 Apr 2021 12:49:51: 22000000 INFO @ Sat, 03 Apr 2021 12:49:56: 27000000 INFO @ Sat, 03 Apr 2021 12:49:57: 19000000 INFO @ Sat, 03 Apr 2021 12:50:01: 23000000 INFO @ Sat, 03 Apr 2021 12:50:05: 28000000 INFO @ Sat, 03 Apr 2021 12:50:06: 20000000 INFO @ Sat, 03 Apr 2021 12:50:10: 24000000 INFO @ Sat, 03 Apr 2021 12:50:14: 29000000 INFO @ Sat, 03 Apr 2021 12:50:16: 21000000 INFO @ Sat, 03 Apr 2021 12:50:19: 25000000 INFO @ Sat, 03 Apr 2021 12:50:24: 30000000 INFO @ Sat, 03 Apr 2021 12:50:25: 22000000 INFO @ Sat, 03 Apr 2021 12:50:29: 26000000 INFO @ Sat, 03 Apr 2021 12:50:33: 31000000 INFO @ Sat, 03 Apr 2021 12:50:35: 23000000 INFO @ Sat, 03 Apr 2021 12:50:38: 27000000 INFO @ Sat, 03 Apr 2021 12:50:42: 32000000 INFO @ Sat, 03 Apr 2021 12:50:44: 24000000 INFO @ Sat, 03 Apr 2021 12:50:48: 28000000 INFO @ Sat, 03 Apr 2021 12:50:51: 33000000 INFO @ Sat, 03 Apr 2021 12:50:53: 25000000 INFO @ Sat, 03 Apr 2021 12:50:57: 29000000 INFO @ Sat, 03 Apr 2021 12:51:00: 34000000 INFO @ Sat, 03 Apr 2021 12:51:03: 26000000 INFO @ Sat, 03 Apr 2021 12:51:07: 30000000 INFO @ Sat, 03 Apr 2021 12:51:10: 35000000 INFO @ Sat, 03 Apr 2021 12:51:13: 27000000 INFO @ Sat, 03 Apr 2021 12:51:15: 31000000 INFO @ Sat, 03 Apr 2021 12:51:20: 36000000 INFO @ Sat, 03 Apr 2021 12:51:22: 28000000 INFO @ Sat, 03 Apr 2021 12:51:25: 32000000 INFO @ Sat, 03 Apr 2021 12:51:30: 37000000 INFO @ Sat, 03 Apr 2021 12:51:32: 29000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sat, 03 Apr 2021 12:51:34: 33000000 INFO @ Sat, 03 Apr 2021 12:51:39: 38000000 INFO @ Sat, 03 Apr 2021 12:51:42: 30000000 INFO @ Sat, 03 Apr 2021 12:51:43: 34000000 INFO @ Sat, 03 Apr 2021 12:51:49: 39000000 INFO @ Sat, 03 Apr 2021 12:51:50: 31000000 INFO @ Sat, 03 Apr 2021 12:51:53: 35000000 INFO @ Sat, 03 Apr 2021 12:51:59: 40000000 INFO @ Sat, 03 Apr 2021 12:52:00: 32000000 INFO @ Sat, 03 Apr 2021 12:52:03: 36000000 INFO @ Sat, 03 Apr 2021 12:52:08: 41000000 INFO @ Sat, 03 Apr 2021 12:52:09: 33000000 INFO @ Sat, 03 Apr 2021 12:52:12: 37000000 INFO @ Sat, 03 Apr 2021 12:52:18: 42000000 INFO @ Sat, 03 Apr 2021 12:52:18: 34000000 INFO @ Sat, 03 Apr 2021 12:52:21: 38000000 INFO @ Sat, 03 Apr 2021 12:52:27: 43000000 INFO @ Sat, 03 Apr 2021 12:52:28: 35000000 INFO @ Sat, 03 Apr 2021 12:52:29: #1 tag size is determined as 151 bps INFO @ Sat, 03 Apr 2021 12:52:29: #1 tag size = 151 INFO @ Sat, 03 Apr 2021 12:52:29: #1 total tags in treatment: 15820127 INFO @ Sat, 03 Apr 2021 12:52:29: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 12:52:29: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 12:52:30: #1 tags after filtering in treatment: 12984459 INFO @ Sat, 03 Apr 2021 12:52:30: #1 Redundant rate of treatment: 0.18 INFO @ Sat, 03 Apr 2021 12:52:30: #1 finished! INFO @ Sat, 03 Apr 2021 12:52:30: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 12:52:30: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 12:52:30: #2 number of paired peaks: 138 WARNING @ Sat, 03 Apr 2021 12:52:30: Fewer paired peaks (138) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 138 pairs to build model! INFO @ Sat, 03 Apr 2021 12:52:30: start model_add_line... INFO @ Sat, 03 Apr 2021 12:52:31: start X-correlation... INFO @ Sat, 03 Apr 2021 12:52:31: end of X-cor INFO @ Sat, 03 Apr 2021 12:52:31: #2 finished! INFO @ Sat, 03 Apr 2021 12:52:31: #2 predicted fragment length is 180 bps INFO @ Sat, 03 Apr 2021 12:52:31: #2 alternative fragment length(s) may be 180 bps INFO @ Sat, 03 Apr 2021 12:52:31: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX7572784/SRX7572784.05_model.r WARNING @ Sat, 03 Apr 2021 12:52:31: #2 Since the d (180) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 12:52:31: #2 You may need to consider one of the other alternative d(s): 180 WARNING @ Sat, 03 Apr 2021 12:52:31: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 12:52:31: #3 Call peaks... INFO @ Sat, 03 Apr 2021 12:52:31: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 12:52:31: 39000000 INFO @ Sat, 03 Apr 2021 12:52:36: 36000000 INFO @ Sat, 03 Apr 2021 12:52:39: 40000000 INFO @ Sat, 03 Apr 2021 12:52:44: 37000000 INFO @ Sat, 03 Apr 2021 12:52:47: 41000000 INFO @ Sat, 03 Apr 2021 12:52:53: 38000000 INFO @ Sat, 03 Apr 2021 12:52:56: 42000000 INFO @ Sat, 03 Apr 2021 12:52:57: #3 Call peaks for each chromosome... BigWig に変換しました。 INFO @ Sat, 03 Apr 2021 12:53:02: 39000000 INFO @ Sat, 03 Apr 2021 12:53:04: 43000000 INFO @ Sat, 03 Apr 2021 12:53:06: #1 tag size is determined as 151 bps INFO @ Sat, 03 Apr 2021 12:53:06: #1 tag size = 151 INFO @ Sat, 03 Apr 2021 12:53:06: #1 total tags in treatment: 15820127 INFO @ Sat, 03 Apr 2021 12:53:06: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 12:53:06: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 12:53:06: #1 tags after filtering in treatment: 12984459 INFO @ Sat, 03 Apr 2021 12:53:06: #1 Redundant rate of treatment: 0.18 INFO @ Sat, 03 Apr 2021 12:53:06: #1 finished! INFO @ Sat, 03 Apr 2021 12:53:06: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 12:53:06: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 12:53:07: #2 number of paired peaks: 138 WARNING @ Sat, 03 Apr 2021 12:53:07: Fewer paired peaks (138) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 138 pairs to build model! INFO @ Sat, 03 Apr 2021 12:53:07: start model_add_line... INFO @ Sat, 03 Apr 2021 12:53:07: start X-correlation... INFO @ Sat, 03 Apr 2021 12:53:07: end of X-cor INFO @ Sat, 03 Apr 2021 12:53:07: #2 finished! INFO @ Sat, 03 Apr 2021 12:53:07: #2 predicted fragment length is 180 bps INFO @ Sat, 03 Apr 2021 12:53:07: #2 alternative fragment length(s) may be 180 bps INFO @ Sat, 03 Apr 2021 12:53:07: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX7572784/SRX7572784.10_model.r WARNING @ Sat, 03 Apr 2021 12:53:07: #2 Since the d (180) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 12:53:07: #2 You may need to consider one of the other alternative d(s): 180 WARNING @ Sat, 03 Apr 2021 12:53:07: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 12:53:07: #3 Call peaks... INFO @ Sat, 03 Apr 2021 12:53:07: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 12:53:10: 40000000 INFO @ Sat, 03 Apr 2021 12:53:12: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX7572784/SRX7572784.05_peaks.xls INFO @ Sat, 03 Apr 2021 12:53:12: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX7572784/SRX7572784.05_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 12:53:12: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX7572784/SRX7572784.05_summits.bed INFO @ Sat, 03 Apr 2021 12:53:12: Done! pass1 - making usageList (15 chroms): 1 millis pass2 - checking and writing primary data (3936 records, 4 fields): 8 millis CompletedMACS2peakCalling INFO @ Sat, 03 Apr 2021 12:53:18: 41000000 INFO @ Sat, 03 Apr 2021 12:53:25: 42000000 INFO @ Sat, 03 Apr 2021 12:53:32: 43000000 INFO @ Sat, 03 Apr 2021 12:53:33: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 12:53:34: #1 tag size is determined as 151 bps INFO @ Sat, 03 Apr 2021 12:53:34: #1 tag size = 151 INFO @ Sat, 03 Apr 2021 12:53:34: #1 total tags in treatment: 15820127 INFO @ Sat, 03 Apr 2021 12:53:34: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 12:53:34: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 12:53:34: #1 tags after filtering in treatment: 12984459 INFO @ Sat, 03 Apr 2021 12:53:34: #1 Redundant rate of treatment: 0.18 INFO @ Sat, 03 Apr 2021 12:53:34: #1 finished! INFO @ Sat, 03 Apr 2021 12:53:34: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 12:53:34: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 12:53:35: #2 number of paired peaks: 138 WARNING @ Sat, 03 Apr 2021 12:53:35: Fewer paired peaks (138) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 138 pairs to build model! INFO @ Sat, 03 Apr 2021 12:53:35: start model_add_line... INFO @ Sat, 03 Apr 2021 12:53:35: start X-correlation... INFO @ Sat, 03 Apr 2021 12:53:35: end of X-cor INFO @ Sat, 03 Apr 2021 12:53:35: #2 finished! INFO @ Sat, 03 Apr 2021 12:53:35: #2 predicted fragment length is 180 bps INFO @ Sat, 03 Apr 2021 12:53:35: #2 alternative fragment length(s) may be 180 bps INFO @ Sat, 03 Apr 2021 12:53:35: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX7572784/SRX7572784.20_model.r WARNING @ Sat, 03 Apr 2021 12:53:35: #2 Since the d (180) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 12:53:35: #2 You may need to consider one of the other alternative d(s): 180 WARNING @ Sat, 03 Apr 2021 12:53:35: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 12:53:35: #3 Call peaks... INFO @ Sat, 03 Apr 2021 12:53:35: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 12:53:47: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX7572784/SRX7572784.10_peaks.xls INFO @ Sat, 03 Apr 2021 12:53:47: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX7572784/SRX7572784.10_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 12:53:47: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX7572784/SRX7572784.10_summits.bed INFO @ Sat, 03 Apr 2021 12:53:47: Done! pass1 - making usageList (15 chroms): 1 millis pass2 - checking and writing primary data (1238 records, 4 fields): 3 millis CompletedMACS2peakCalling INFO @ Sat, 03 Apr 2021 12:54:00: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 12:54:14: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX7572784/SRX7572784.20_peaks.xls INFO @ Sat, 03 Apr 2021 12:54:14: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX7572784/SRX7572784.20_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 12:54:14: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX7572784/SRX7572784.20_summits.bed INFO @ Sat, 03 Apr 2021 12:54:14: Done! pass1 - making usageList (12 chroms): 1 millis pass2 - checking and writing primary data (478 records, 4 fields): 2 millis CompletedMACS2peakCalling