Job ID = 12265609 SRX = SRX7277034 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 36528951 spots for SRR10597299/SRR10597299.sra Written 36528951 spots for SRR10597299/SRR10597299.sra fastq に変換しました。 bowtie でマッピング中... Your job 12266424 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:03:59 36528951 reads; of these: 36528951 (100.00%) were paired; of these: 14669684 (40.16%) aligned concordantly 0 times 13953201 (38.20%) aligned concordantly exactly 1 time 7906066 (21.64%) aligned concordantly >1 times ---- 14669684 pairs aligned concordantly 0 times; of these: 3346437 (22.81%) aligned discordantly 1 time ---- 11323247 pairs aligned 0 times concordantly or discordantly; of these: 22646494 mates make up the pairs; of these: 18198413 (80.36%) aligned 0 times 1001809 (4.42%) aligned exactly 1 time 3446272 (15.22%) aligned >1 times 75.09% overall alignment rate Time searching: 01:04:00 Overall time: 01:04:00 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 24 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 5455031 / 25001039 = 0.2182 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 09:19:11: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX7277034/SRX7277034.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX7277034/SRX7277034.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX7277034/SRX7277034.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX7277034/SRX7277034.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 09:19:11: #1 read tag files... INFO @ Sat, 03 Apr 2021 09:19:11: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 09:19:19: 1000000 INFO @ Sat, 03 Apr 2021 09:19:27: 2000000 INFO @ Sat, 03 Apr 2021 09:19:34: 3000000 WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 09:19:41: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX7277034/SRX7277034.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX7277034/SRX7277034.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX7277034/SRX7277034.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX7277034/SRX7277034.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 09:19:41: #1 read tag files... INFO @ Sat, 03 Apr 2021 09:19:41: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 09:19:42: 4000000 INFO @ Sat, 03 Apr 2021 09:19:51: 1000000 INFO @ Sat, 03 Apr 2021 09:19:52: 5000000 INFO @ Sat, 03 Apr 2021 09:20:00: 2000000 INFO @ Sat, 03 Apr 2021 09:20:01: 6000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 09:20:09: 3000000 INFO @ Sat, 03 Apr 2021 09:20:11: 7000000 INFO @ Sat, 03 Apr 2021 09:20:11: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX7277034/SRX7277034.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX7277034/SRX7277034.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX7277034/SRX7277034.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX7277034/SRX7277034.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 09:20:11: #1 read tag files... INFO @ Sat, 03 Apr 2021 09:20:11: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 09:20:18: 4000000 INFO @ Sat, 03 Apr 2021 09:20:20: 8000000 INFO @ Sat, 03 Apr 2021 09:20:23: 1000000 INFO @ Sat, 03 Apr 2021 09:20:26: 5000000 INFO @ Sat, 03 Apr 2021 09:20:29: 9000000 INFO @ Sat, 03 Apr 2021 09:20:34: 2000000 INFO @ Sat, 03 Apr 2021 09:20:35: 6000000 INFO @ Sat, 03 Apr 2021 09:20:39: 10000000 INFO @ Sat, 03 Apr 2021 09:20:43: 7000000 INFO @ Sat, 03 Apr 2021 09:20:46: 3000000 INFO @ Sat, 03 Apr 2021 09:20:48: 11000000 INFO @ Sat, 03 Apr 2021 09:20:52: 8000000 INFO @ Sat, 03 Apr 2021 09:20:57: 4000000 INFO @ Sat, 03 Apr 2021 09:20:58: 12000000 INFO @ Sat, 03 Apr 2021 09:21:01: 9000000 INFO @ Sat, 03 Apr 2021 09:21:08: 13000000 INFO @ Sat, 03 Apr 2021 09:21:09: 5000000 INFO @ Sat, 03 Apr 2021 09:21:11: 10000000 INFO @ Sat, 03 Apr 2021 09:21:18: 14000000 INFO @ Sat, 03 Apr 2021 09:21:21: 6000000 INFO @ Sat, 03 Apr 2021 09:21:21: 11000000 INFO @ Sat, 03 Apr 2021 09:21:29: 15000000 INFO @ Sat, 03 Apr 2021 09:21:31: 12000000 INFO @ Sat, 03 Apr 2021 09:21:33: 7000000 INFO @ Sat, 03 Apr 2021 09:21:39: 16000000 INFO @ Sat, 03 Apr 2021 09:21:41: 13000000 INFO @ Sat, 03 Apr 2021 09:21:44: 8000000 INFO @ Sat, 03 Apr 2021 09:21:49: 17000000 INFO @ Sat, 03 Apr 2021 09:21:51: 14000000 INFO @ Sat, 03 Apr 2021 09:21:56: 9000000 INFO @ Sat, 03 Apr 2021 09:21:59: 18000000 INFO @ Sat, 03 Apr 2021 09:22:01: 15000000 INFO @ Sat, 03 Apr 2021 09:22:08: 10000000 INFO @ Sat, 03 Apr 2021 09:22:09: 19000000 INFO @ Sat, 03 Apr 2021 09:22:10: 16000000 INFO @ Sat, 03 Apr 2021 09:22:18: 20000000 INFO @ Sat, 03 Apr 2021 09:22:19: 11000000 INFO @ Sat, 03 Apr 2021 09:22:20: 17000000 INFO @ Sat, 03 Apr 2021 09:22:28: 21000000 INFO @ Sat, 03 Apr 2021 09:22:30: 18000000 INFO @ Sat, 03 Apr 2021 09:22:31: 12000000 INFO @ Sat, 03 Apr 2021 09:22:38: 22000000 INFO @ Sat, 03 Apr 2021 09:22:39: 19000000 INFO @ Sat, 03 Apr 2021 09:22:42: 13000000 INFO @ Sat, 03 Apr 2021 09:22:47: 23000000 INFO @ Sat, 03 Apr 2021 09:22:50: 20000000 INFO @ Sat, 03 Apr 2021 09:22:54: 14000000 INFO @ Sat, 03 Apr 2021 09:22:57: 24000000 INFO @ Sat, 03 Apr 2021 09:23:00: 21000000 INFO @ Sat, 03 Apr 2021 09:23:06: 15000000 INFO @ Sat, 03 Apr 2021 09:23:07: 25000000 INFO @ Sat, 03 Apr 2021 09:23:09: 22000000 INFO @ Sat, 03 Apr 2021 09:23:17: 26000000 INFO @ Sat, 03 Apr 2021 09:23:18: 16000000 INFO @ Sat, 03 Apr 2021 09:23:19: 23000000 INFO @ Sat, 03 Apr 2021 09:23:26: 27000000 INFO @ Sat, 03 Apr 2021 09:23:27: 24000000 INFO @ Sat, 03 Apr 2021 09:23:29: 17000000 INFO @ Sat, 03 Apr 2021 09:23:34: 28000000 INFO @ Sat, 03 Apr 2021 09:23:36: 25000000 INFO @ Sat, 03 Apr 2021 09:23:40: 18000000 INFO @ Sat, 03 Apr 2021 09:23:44: 29000000 INFO @ Sat, 03 Apr 2021 09:23:44: 26000000 INFO @ Sat, 03 Apr 2021 09:23:51: 19000000 INFO @ Sat, 03 Apr 2021 09:23:52: 27000000 INFO @ Sat, 03 Apr 2021 09:23:53: 30000000 INFO @ Sat, 03 Apr 2021 09:24:00: 28000000 INFO @ Sat, 03 Apr 2021 09:24:02: 31000000 INFO @ Sat, 03 Apr 2021 09:24:03: 20000000 INFO @ Sat, 03 Apr 2021 09:24:08: 29000000 INFO @ Sat, 03 Apr 2021 09:24:10: 32000000 INFO @ Sat, 03 Apr 2021 09:24:15: 21000000 INFO @ Sat, 03 Apr 2021 09:24:17: 30000000 INFO @ Sat, 03 Apr 2021 09:24:19: 33000000 INFO @ Sat, 03 Apr 2021 09:24:25: 31000000 INFO @ Sat, 03 Apr 2021 09:24:26: 22000000 INFO @ Sat, 03 Apr 2021 09:24:27: 34000000 INFO @ Sat, 03 Apr 2021 09:24:33: 32000000 INFO @ Sat, 03 Apr 2021 09:24:35: 35000000 INFO @ Sat, 03 Apr 2021 09:24:37: 23000000 INFO @ Sat, 03 Apr 2021 09:24:41: 33000000 INFO @ Sat, 03 Apr 2021 09:24:44: 36000000 INFO @ Sat, 03 Apr 2021 09:24:48: 34000000 INFO @ Sat, 03 Apr 2021 09:24:49: 24000000 INFO @ Sat, 03 Apr 2021 09:24:52: 37000000 INFO @ Sat, 03 Apr 2021 09:24:57: 35000000 INFO @ Sat, 03 Apr 2021 09:25:01: 25000000 INFO @ Sat, 03 Apr 2021 09:25:01: 38000000 INFO @ Sat, 03 Apr 2021 09:25:05: 36000000 INFO @ Sat, 03 Apr 2021 09:25:10: 39000000 INFO @ Sat, 03 Apr 2021 09:25:12: 26000000 INFO @ Sat, 03 Apr 2021 09:25:14: 37000000 INFO @ Sat, 03 Apr 2021 09:25:19: 40000000 INFO @ Sat, 03 Apr 2021 09:25:23: 38000000 INFO @ Sat, 03 Apr 2021 09:25:24: 27000000 INFO @ Sat, 03 Apr 2021 09:25:28: 41000000 INFO @ Sat, 03 Apr 2021 09:25:33: 39000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sat, 03 Apr 2021 09:25:36: 28000000 INFO @ Sat, 03 Apr 2021 09:25:37: 42000000 INFO @ Sat, 03 Apr 2021 09:25:42: 40000000 INFO @ Sat, 03 Apr 2021 09:25:46: 43000000 INFO @ Sat, 03 Apr 2021 09:25:48: 29000000 INFO @ Sat, 03 Apr 2021 09:25:51: 41000000 INFO @ Sat, 03 Apr 2021 09:25:55: #1 tag size is determined as 75 bps INFO @ Sat, 03 Apr 2021 09:25:55: #1 tag size = 75 INFO @ Sat, 03 Apr 2021 09:25:55: #1 total tags in treatment: 16648518 INFO @ Sat, 03 Apr 2021 09:25:55: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 09:25:55: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 09:25:55: #1 tags after filtering in treatment: 12883834 INFO @ Sat, 03 Apr 2021 09:25:55: #1 Redundant rate of treatment: 0.23 INFO @ Sat, 03 Apr 2021 09:25:55: #1 finished! INFO @ Sat, 03 Apr 2021 09:25:55: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 09:25:55: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 09:25:56: #2 number of paired peaks: 161 WARNING @ Sat, 03 Apr 2021 09:25:56: Fewer paired peaks (161) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 161 pairs to build model! INFO @ Sat, 03 Apr 2021 09:25:56: start model_add_line... INFO @ Sat, 03 Apr 2021 09:25:57: start X-correlation... INFO @ Sat, 03 Apr 2021 09:25:57: end of X-cor INFO @ Sat, 03 Apr 2021 09:25:57: #2 finished! INFO @ Sat, 03 Apr 2021 09:25:57: #2 predicted fragment length is 83 bps INFO @ Sat, 03 Apr 2021 09:25:57: #2 alternative fragment length(s) may be 4,83,116,574 bps INFO @ Sat, 03 Apr 2021 09:25:57: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX7277034/SRX7277034.05_model.r WARNING @ Sat, 03 Apr 2021 09:25:57: #2 Since the d (83) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 09:25:57: #2 You may need to consider one of the other alternative d(s): 4,83,116,574 WARNING @ Sat, 03 Apr 2021 09:25:57: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 09:25:57: #3 Call peaks... INFO @ Sat, 03 Apr 2021 09:25:57: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 09:26:00: 42000000 INFO @ Sat, 03 Apr 2021 09:26:00: 30000000 INFO @ Sat, 03 Apr 2021 09:26:08: 43000000 INFO @ Sat, 03 Apr 2021 09:26:11: 31000000 INFO @ Sat, 03 Apr 2021 09:26:16: #1 tag size is determined as 75 bps INFO @ Sat, 03 Apr 2021 09:26:16: #1 tag size = 75 INFO @ Sat, 03 Apr 2021 09:26:16: #1 total tags in treatment: 16648518 INFO @ Sat, 03 Apr 2021 09:26:16: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 09:26:16: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 09:26:17: #1 tags after filtering in treatment: 12883834 INFO @ Sat, 03 Apr 2021 09:26:17: #1 Redundant rate of treatment: 0.23 INFO @ Sat, 03 Apr 2021 09:26:17: #1 finished! INFO @ Sat, 03 Apr 2021 09:26:17: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 09:26:17: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 09:26:18: #2 number of paired peaks: 161 WARNING @ Sat, 03 Apr 2021 09:26:18: Fewer paired peaks (161) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 161 pairs to build model! INFO @ Sat, 03 Apr 2021 09:26:18: start model_add_line... INFO @ Sat, 03 Apr 2021 09:26:18: start X-correlation... INFO @ Sat, 03 Apr 2021 09:26:18: end of X-cor INFO @ Sat, 03 Apr 2021 09:26:18: #2 finished! INFO @ Sat, 03 Apr 2021 09:26:18: #2 predicted fragment length is 83 bps INFO @ Sat, 03 Apr 2021 09:26:18: #2 alternative fragment length(s) may be 4,83,116,574 bps INFO @ Sat, 03 Apr 2021 09:26:18: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX7277034/SRX7277034.10_model.r WARNING @ Sat, 03 Apr 2021 09:26:18: #2 Since the d (83) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 09:26:18: #2 You may need to consider one of the other alternative d(s): 4,83,116,574 WARNING @ Sat, 03 Apr 2021 09:26:18: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 09:26:18: #3 Call peaks... INFO @ Sat, 03 Apr 2021 09:26:18: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 09:26:22: 32000000 INFO @ Sat, 03 Apr 2021 09:26:32: 33000000 INFO @ Sat, 03 Apr 2021 09:26:33: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 09:26:42: 34000000 INFO @ Sat, 03 Apr 2021 09:26:52: 35000000 INFO @ Sat, 03 Apr 2021 09:26:53: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX7277034/SRX7277034.05_peaks.xls INFO @ Sat, 03 Apr 2021 09:26:53: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX7277034/SRX7277034.05_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 09:26:53: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX7277034/SRX7277034.05_summits.bed INFO @ Sat, 03 Apr 2021 09:26:53: Done! pass1 - making usageList (15 chroms): 4 millis pass2 - checking and writing primary data (7104 records, 4 fields): 34 millis CompletedMACS2peakCalling INFO @ Sat, 03 Apr 2021 09:26:54: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 09:27:02: 36000000 BigWig に変換しました。 INFO @ Sat, 03 Apr 2021 09:27:12: 37000000 INFO @ Sat, 03 Apr 2021 09:27:14: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX7277034/SRX7277034.10_peaks.xls INFO @ Sat, 03 Apr 2021 09:27:14: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX7277034/SRX7277034.10_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 09:27:14: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX7277034/SRX7277034.10_summits.bed INFO @ Sat, 03 Apr 2021 09:27:14: Done! pass1 - making usageList (13 chroms): 2 millis pass2 - checking and writing primary data (1713 records, 4 fields): 6 millis CompletedMACS2peakCalling INFO @ Sat, 03 Apr 2021 09:27:22: 38000000 INFO @ Sat, 03 Apr 2021 09:27:33: 39000000 INFO @ Sat, 03 Apr 2021 09:27:43: 40000000 INFO @ Sat, 03 Apr 2021 09:27:54: 41000000 INFO @ Sat, 03 Apr 2021 09:28:04: 42000000 INFO @ Sat, 03 Apr 2021 09:28:14: 43000000 INFO @ Sat, 03 Apr 2021 09:28:23: #1 tag size is determined as 75 bps INFO @ Sat, 03 Apr 2021 09:28:23: #1 tag size = 75 INFO @ Sat, 03 Apr 2021 09:28:23: #1 total tags in treatment: 16648518 INFO @ Sat, 03 Apr 2021 09:28:23: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 09:28:23: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 09:28:23: #1 tags after filtering in treatment: 12883834 INFO @ Sat, 03 Apr 2021 09:28:23: #1 Redundant rate of treatment: 0.23 INFO @ Sat, 03 Apr 2021 09:28:23: #1 finished! INFO @ Sat, 03 Apr 2021 09:28:23: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 09:28:23: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 09:28:25: #2 number of paired peaks: 161 WARNING @ Sat, 03 Apr 2021 09:28:25: Fewer paired peaks (161) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 161 pairs to build model! INFO @ Sat, 03 Apr 2021 09:28:25: start model_add_line... INFO @ Sat, 03 Apr 2021 09:28:25: start X-correlation... INFO @ Sat, 03 Apr 2021 09:28:25: end of X-cor INFO @ Sat, 03 Apr 2021 09:28:25: #2 finished! INFO @ Sat, 03 Apr 2021 09:28:25: #2 predicted fragment length is 83 bps INFO @ Sat, 03 Apr 2021 09:28:25: #2 alternative fragment length(s) may be 4,83,116,574 bps INFO @ Sat, 03 Apr 2021 09:28:25: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX7277034/SRX7277034.20_model.r WARNING @ Sat, 03 Apr 2021 09:28:25: #2 Since the d (83) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 09:28:25: #2 You may need to consider one of the other alternative d(s): 4,83,116,574 WARNING @ Sat, 03 Apr 2021 09:28:25: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 09:28:25: #3 Call peaks... INFO @ Sat, 03 Apr 2021 09:28:25: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 09:29:00: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 09:29:19: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX7277034/SRX7277034.20_peaks.xls INFO @ Sat, 03 Apr 2021 09:29:19: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX7277034/SRX7277034.20_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 09:29:19: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX7277034/SRX7277034.20_summits.bed INFO @ Sat, 03 Apr 2021 09:29:19: Done! pass1 - making usageList (9 chroms): 1 millis pass2 - checking and writing primary data (286 records, 4 fields): 2 millis CompletedMACS2peakCalling