Job ID = 12265557 SRX = SRX7277022 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 31972354 spots for SRR10597287/SRR10597287.sra Written 31972354 spots for SRR10597287/SRR10597287.sra fastq に変換しました。 bowtie でマッピング中... Your job 12265867 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:42:57 31972354 reads; of these: 31972354 (100.00%) were paired; of these: 12739754 (39.85%) aligned concordantly 0 times 12943560 (40.48%) aligned concordantly exactly 1 time 6289040 (19.67%) aligned concordantly >1 times ---- 12739754 pairs aligned concordantly 0 times; of these: 3192840 (25.06%) aligned discordantly 1 time ---- 9546914 pairs aligned 0 times concordantly or discordantly; of these: 19093828 mates make up the pairs; of these: 15572681 (81.56%) aligned 0 times 877299 (4.59%) aligned exactly 1 time 2643848 (13.85%) aligned >1 times 75.65% overall alignment rate Time searching: 00:42:57 Overall time: 00:42:57 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 20 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 4407549 / 22250237 = 0.1981 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 08:37:30: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX7277022/SRX7277022.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX7277022/SRX7277022.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX7277022/SRX7277022.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX7277022/SRX7277022.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 08:37:30: #1 read tag files... INFO @ Sat, 03 Apr 2021 08:37:30: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 08:37:37: 1000000 INFO @ Sat, 03 Apr 2021 08:37:44: 2000000 INFO @ Sat, 03 Apr 2021 08:37:50: 3000000 INFO @ Sat, 03 Apr 2021 08:37:57: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 08:38:00: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX7277022/SRX7277022.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX7277022/SRX7277022.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX7277022/SRX7277022.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX7277022/SRX7277022.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 08:38:00: #1 read tag files... INFO @ Sat, 03 Apr 2021 08:38:00: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 08:38:04: 5000000 INFO @ Sat, 03 Apr 2021 08:38:09: 1000000 INFO @ Sat, 03 Apr 2021 08:38:12: 6000000 INFO @ Sat, 03 Apr 2021 08:38:18: 2000000 INFO @ Sat, 03 Apr 2021 08:38:20: 7000000 INFO @ Sat, 03 Apr 2021 08:38:27: 3000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 08:38:28: 8000000 INFO @ Sat, 03 Apr 2021 08:38:30: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX7277022/SRX7277022.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX7277022/SRX7277022.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX7277022/SRX7277022.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX7277022/SRX7277022.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 08:38:30: #1 read tag files... INFO @ Sat, 03 Apr 2021 08:38:30: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 08:38:36: 4000000 INFO @ Sat, 03 Apr 2021 08:38:37: 9000000 INFO @ Sat, 03 Apr 2021 08:38:39: 1000000 INFO @ Sat, 03 Apr 2021 08:38:45: 10000000 INFO @ Sat, 03 Apr 2021 08:38:46: 5000000 INFO @ Sat, 03 Apr 2021 08:38:47: 2000000 INFO @ Sat, 03 Apr 2021 08:38:53: 11000000 INFO @ Sat, 03 Apr 2021 08:38:55: 6000000 INFO @ Sat, 03 Apr 2021 08:38:56: 3000000 INFO @ Sat, 03 Apr 2021 08:39:02: 12000000 INFO @ Sat, 03 Apr 2021 08:39:04: 7000000 INFO @ Sat, 03 Apr 2021 08:39:05: 4000000 INFO @ Sat, 03 Apr 2021 08:39:10: 13000000 INFO @ Sat, 03 Apr 2021 08:39:13: 8000000 INFO @ Sat, 03 Apr 2021 08:39:13: 5000000 INFO @ Sat, 03 Apr 2021 08:39:18: 14000000 INFO @ Sat, 03 Apr 2021 08:39:22: 6000000 INFO @ Sat, 03 Apr 2021 08:39:22: 9000000 INFO @ Sat, 03 Apr 2021 08:39:27: 15000000 INFO @ Sat, 03 Apr 2021 08:39:31: 7000000 INFO @ Sat, 03 Apr 2021 08:39:32: 10000000 INFO @ Sat, 03 Apr 2021 08:39:35: 16000000 INFO @ Sat, 03 Apr 2021 08:39:40: 8000000 INFO @ Sat, 03 Apr 2021 08:39:41: 11000000 INFO @ Sat, 03 Apr 2021 08:39:44: 17000000 INFO @ Sat, 03 Apr 2021 08:39:49: 9000000 INFO @ Sat, 03 Apr 2021 08:39:50: 12000000 INFO @ Sat, 03 Apr 2021 08:39:52: 18000000 INFO @ Sat, 03 Apr 2021 08:39:57: 10000000 INFO @ Sat, 03 Apr 2021 08:40:00: 13000000 INFO @ Sat, 03 Apr 2021 08:40:01: 19000000 INFO @ Sat, 03 Apr 2021 08:40:06: 11000000 INFO @ Sat, 03 Apr 2021 08:40:09: 14000000 INFO @ Sat, 03 Apr 2021 08:40:10: 20000000 INFO @ Sat, 03 Apr 2021 08:40:15: 12000000 INFO @ Sat, 03 Apr 2021 08:40:18: 15000000 INFO @ Sat, 03 Apr 2021 08:40:19: 21000000 INFO @ Sat, 03 Apr 2021 08:40:24: 13000000 INFO @ Sat, 03 Apr 2021 08:40:28: 16000000 INFO @ Sat, 03 Apr 2021 08:40:28: 22000000 INFO @ Sat, 03 Apr 2021 08:40:33: 14000000 INFO @ Sat, 03 Apr 2021 08:40:37: 23000000 INFO @ Sat, 03 Apr 2021 08:40:37: 17000000 INFO @ Sat, 03 Apr 2021 08:40:42: 15000000 INFO @ Sat, 03 Apr 2021 08:40:46: 24000000 INFO @ Sat, 03 Apr 2021 08:40:46: 18000000 INFO @ Sat, 03 Apr 2021 08:40:51: 16000000 INFO @ Sat, 03 Apr 2021 08:40:54: 25000000 INFO @ Sat, 03 Apr 2021 08:40:55: 19000000 INFO @ Sat, 03 Apr 2021 08:41:00: 17000000 INFO @ Sat, 03 Apr 2021 08:41:03: 26000000 INFO @ Sat, 03 Apr 2021 08:41:04: 20000000 INFO @ Sat, 03 Apr 2021 08:41:09: 18000000 INFO @ Sat, 03 Apr 2021 08:41:12: 27000000 INFO @ Sat, 03 Apr 2021 08:41:14: 21000000 INFO @ Sat, 03 Apr 2021 08:41:17: 19000000 INFO @ Sat, 03 Apr 2021 08:41:20: 28000000 INFO @ Sat, 03 Apr 2021 08:41:23: 22000000 INFO @ Sat, 03 Apr 2021 08:41:25: 20000000 INFO @ Sat, 03 Apr 2021 08:41:28: 29000000 INFO @ Sat, 03 Apr 2021 08:41:32: 23000000 INFO @ Sat, 03 Apr 2021 08:41:34: 21000000 INFO @ Sat, 03 Apr 2021 08:41:36: 30000000 INFO @ Sat, 03 Apr 2021 08:41:41: 24000000 INFO @ Sat, 03 Apr 2021 08:41:42: 22000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sat, 03 Apr 2021 08:41:44: 31000000 INFO @ Sat, 03 Apr 2021 08:41:51: 25000000 INFO @ Sat, 03 Apr 2021 08:41:51: 23000000 INFO @ Sat, 03 Apr 2021 08:41:53: 32000000 INFO @ Sat, 03 Apr 2021 08:42:00: 24000000 INFO @ Sat, 03 Apr 2021 08:42:00: 26000000 INFO @ Sat, 03 Apr 2021 08:42:02: 33000000 INFO @ Sat, 03 Apr 2021 08:42:08: 25000000 INFO @ Sat, 03 Apr 2021 08:42:09: 27000000 INFO @ Sat, 03 Apr 2021 08:42:11: 34000000 INFO @ Sat, 03 Apr 2021 08:42:17: 26000000 INFO @ Sat, 03 Apr 2021 08:42:18: 28000000 INFO @ Sat, 03 Apr 2021 08:42:19: 35000000 INFO @ Sat, 03 Apr 2021 08:42:25: 27000000 INFO @ Sat, 03 Apr 2021 08:42:27: 36000000 INFO @ Sat, 03 Apr 2021 08:42:28: 29000000 INFO @ Sat, 03 Apr 2021 08:42:33: 28000000 INFO @ Sat, 03 Apr 2021 08:42:36: 37000000 INFO @ Sat, 03 Apr 2021 08:42:37: 30000000 INFO @ Sat, 03 Apr 2021 08:42:42: 29000000 INFO @ Sat, 03 Apr 2021 08:42:44: 38000000 INFO @ Sat, 03 Apr 2021 08:42:46: 31000000 INFO @ Sat, 03 Apr 2021 08:42:50: 30000000 INFO @ Sat, 03 Apr 2021 08:42:52: 39000000 BigWig に変換しました。 INFO @ Sat, 03 Apr 2021 08:42:55: 32000000 INFO @ Sat, 03 Apr 2021 08:42:56: #1 tag size is determined as 75 bps INFO @ Sat, 03 Apr 2021 08:42:56: #1 tag size = 75 INFO @ Sat, 03 Apr 2021 08:42:56: #1 total tags in treatment: 15052761 INFO @ Sat, 03 Apr 2021 08:42:56: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 08:42:56: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 08:42:57: #1 tags after filtering in treatment: 11821423 INFO @ Sat, 03 Apr 2021 08:42:57: #1 Redundant rate of treatment: 0.21 INFO @ Sat, 03 Apr 2021 08:42:57: #1 finished! INFO @ Sat, 03 Apr 2021 08:42:57: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 08:42:57: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 08:42:58: #2 number of paired peaks: 191 WARNING @ Sat, 03 Apr 2021 08:42:58: Fewer paired peaks (191) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 191 pairs to build model! INFO @ Sat, 03 Apr 2021 08:42:58: start model_add_line... INFO @ Sat, 03 Apr 2021 08:42:58: start X-correlation... INFO @ Sat, 03 Apr 2021 08:42:58: end of X-cor INFO @ Sat, 03 Apr 2021 08:42:58: #2 finished! INFO @ Sat, 03 Apr 2021 08:42:58: #2 predicted fragment length is 94 bps INFO @ Sat, 03 Apr 2021 08:42:58: #2 alternative fragment length(s) may be 4,94 bps INFO @ Sat, 03 Apr 2021 08:42:58: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX7277022/SRX7277022.05_model.r WARNING @ Sat, 03 Apr 2021 08:42:58: #2 Since the d (94) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 08:42:58: #2 You may need to consider one of the other alternative d(s): 4,94 WARNING @ Sat, 03 Apr 2021 08:42:58: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 08:42:58: #3 Call peaks... INFO @ Sat, 03 Apr 2021 08:42:58: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 08:42:58: 31000000 INFO @ Sat, 03 Apr 2021 08:43:04: 33000000 INFO @ Sat, 03 Apr 2021 08:43:06: 32000000 INFO @ Sat, 03 Apr 2021 08:43:13: 34000000 INFO @ Sat, 03 Apr 2021 08:43:14: 33000000 INFO @ Sat, 03 Apr 2021 08:43:22: 34000000 INFO @ Sat, 03 Apr 2021 08:43:22: 35000000 INFO @ Sat, 03 Apr 2021 08:43:25: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 08:43:30: 35000000 INFO @ Sat, 03 Apr 2021 08:43:31: 36000000 INFO @ Sat, 03 Apr 2021 08:43:37: 36000000 INFO @ Sat, 03 Apr 2021 08:43:39: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX7277022/SRX7277022.05_peaks.xls INFO @ Sat, 03 Apr 2021 08:43:39: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX7277022/SRX7277022.05_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 08:43:39: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX7277022/SRX7277022.05_summits.bed INFO @ Sat, 03 Apr 2021 08:43:39: Done! pass1 - making usageList (15 chroms): 1 millis pass2 - checking and writing primary data (6679 records, 4 fields): 9 millis CompletedMACS2peakCalling INFO @ Sat, 03 Apr 2021 08:43:40: 37000000 INFO @ Sat, 03 Apr 2021 08:43:45: 37000000 INFO @ Sat, 03 Apr 2021 08:43:49: 38000000 INFO @ Sat, 03 Apr 2021 08:43:53: 38000000 INFO @ Sat, 03 Apr 2021 08:43:58: 39000000 INFO @ Sat, 03 Apr 2021 08:44:00: 39000000 INFO @ Sat, 03 Apr 2021 08:44:02: #1 tag size is determined as 75 bps INFO @ Sat, 03 Apr 2021 08:44:02: #1 tag size = 75 INFO @ Sat, 03 Apr 2021 08:44:02: #1 total tags in treatment: 15052761 INFO @ Sat, 03 Apr 2021 08:44:02: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 08:44:02: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 08:44:03: #1 tags after filtering in treatment: 11821423 INFO @ Sat, 03 Apr 2021 08:44:03: #1 Redundant rate of treatment: 0.21 INFO @ Sat, 03 Apr 2021 08:44:03: #1 finished! INFO @ Sat, 03 Apr 2021 08:44:03: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 08:44:03: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 08:44:04: #2 number of paired peaks: 191 WARNING @ Sat, 03 Apr 2021 08:44:04: Fewer paired peaks (191) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 191 pairs to build model! INFO @ Sat, 03 Apr 2021 08:44:04: start model_add_line... INFO @ Sat, 03 Apr 2021 08:44:04: start X-correlation... INFO @ Sat, 03 Apr 2021 08:44:04: end of X-cor INFO @ Sat, 03 Apr 2021 08:44:04: #2 finished! INFO @ Sat, 03 Apr 2021 08:44:04: #2 predicted fragment length is 94 bps INFO @ Sat, 03 Apr 2021 08:44:04: #2 alternative fragment length(s) may be 4,94 bps INFO @ Sat, 03 Apr 2021 08:44:04: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX7277022/SRX7277022.10_model.r WARNING @ Sat, 03 Apr 2021 08:44:04: #2 Since the d (94) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 08:44:04: #2 You may need to consider one of the other alternative d(s): 4,94 WARNING @ Sat, 03 Apr 2021 08:44:04: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 08:44:04: #3 Call peaks... INFO @ Sat, 03 Apr 2021 08:44:04: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 08:44:05: #1 tag size is determined as 75 bps INFO @ Sat, 03 Apr 2021 08:44:05: #1 tag size = 75 INFO @ Sat, 03 Apr 2021 08:44:05: #1 total tags in treatment: 15052761 INFO @ Sat, 03 Apr 2021 08:44:05: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 08:44:05: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 08:44:05: #1 tags after filtering in treatment: 11821423 INFO @ Sat, 03 Apr 2021 08:44:05: #1 Redundant rate of treatment: 0.21 INFO @ Sat, 03 Apr 2021 08:44:05: #1 finished! INFO @ Sat, 03 Apr 2021 08:44:05: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 08:44:05: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 08:44:06: #2 number of paired peaks: 191 WARNING @ Sat, 03 Apr 2021 08:44:06: Fewer paired peaks (191) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 191 pairs to build model! INFO @ Sat, 03 Apr 2021 08:44:06: start model_add_line... INFO @ Sat, 03 Apr 2021 08:44:06: start X-correlation... INFO @ Sat, 03 Apr 2021 08:44:06: end of X-cor INFO @ Sat, 03 Apr 2021 08:44:06: #2 finished! INFO @ Sat, 03 Apr 2021 08:44:06: #2 predicted fragment length is 94 bps INFO @ Sat, 03 Apr 2021 08:44:06: #2 alternative fragment length(s) may be 4,94 bps INFO @ Sat, 03 Apr 2021 08:44:06: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX7277022/SRX7277022.20_model.r WARNING @ Sat, 03 Apr 2021 08:44:06: #2 Since the d (94) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 08:44:06: #2 You may need to consider one of the other alternative d(s): 4,94 WARNING @ Sat, 03 Apr 2021 08:44:06: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 08:44:06: #3 Call peaks... INFO @ Sat, 03 Apr 2021 08:44:06: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 08:44:31: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 08:44:31: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 08:44:44: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX7277022/SRX7277022.20_peaks.xls INFO @ Sat, 03 Apr 2021 08:44:44: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX7277022/SRX7277022.20_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 08:44:44: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX7277022/SRX7277022.20_summits.bed INFO @ Sat, 03 Apr 2021 08:44:44: Done! INFO @ Sat, 03 Apr 2021 08:44:46: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX7277022/SRX7277022.10_peaks.xls INFO @ Sat, 03 Apr 2021 08:44:46: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX7277022/SRX7277022.10_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 08:44:46: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX7277022/SRX7277022.10_summits.bed INFO @ Sat, 03 Apr 2021 08:44:46: Done! pass1 - making usageList (7 chroms): 0 millis pass2 - checking and writing primary data (150 records, 4 fields): 2 millis CompletedMACS2peakCalling pass1 - making usageList (13 chroms): 1 millis pass2 - checking and writing primary data (1897 records, 4 fields): 3 millis CompletedMACS2peakCalling