Job ID = 14168287 SRX = SRX7175260 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 28791806 spots for SRR10485700/SRR10485700.sra Written 28791806 spots for SRR10485700/SRR10485700.sra fastq に変換しました。 bowtie でマッピング中... Your job 14169560 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:25:39 28791806 reads; of these: 28791806 (100.00%) were paired; of these: 3065564 (10.65%) aligned concordantly 0 times 14277485 (49.59%) aligned concordantly exactly 1 time 11448757 (39.76%) aligned concordantly >1 times ---- 3065564 pairs aligned concordantly 0 times; of these: 546861 (17.84%) aligned discordantly 1 time ---- 2518703 pairs aligned 0 times concordantly or discordantly; of these: 5037406 mates make up the pairs; of these: 3294931 (65.41%) aligned 0 times 599962 (11.91%) aligned exactly 1 time 1142513 (22.68%) aligned >1 times 94.28% overall alignment rate Time searching: 01:25:39 Overall time: 01:25:39 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 24 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 1765208 / 26237164 = 0.0673 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 10 Dec 2021 18:33:41: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX7175260/SRX7175260.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX7175260/SRX7175260.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX7175260/SRX7175260.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX7175260/SRX7175260.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 10 Dec 2021 18:33:41: #1 read tag files... INFO @ Fri, 10 Dec 2021 18:33:41: #1 read treatment tags... INFO @ Fri, 10 Dec 2021 18:33:47: 1000000 INFO @ Fri, 10 Dec 2021 18:33:52: 2000000 INFO @ Fri, 10 Dec 2021 18:33:57: 3000000 INFO @ Fri, 10 Dec 2021 18:34:02: 4000000 INFO @ Fri, 10 Dec 2021 18:34:07: 5000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 10 Dec 2021 18:34:11: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX7175260/SRX7175260.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX7175260/SRX7175260.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX7175260/SRX7175260.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX7175260/SRX7175260.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 10 Dec 2021 18:34:11: #1 read tag files... INFO @ Fri, 10 Dec 2021 18:34:11: #1 read treatment tags... INFO @ Fri, 10 Dec 2021 18:34:13: 6000000 INFO @ Fri, 10 Dec 2021 18:34:17: 1000000 INFO @ Fri, 10 Dec 2021 18:34:19: 7000000 INFO @ Fri, 10 Dec 2021 18:34:23: 2000000 INFO @ Fri, 10 Dec 2021 18:34:24: 8000000 INFO @ Fri, 10 Dec 2021 18:34:29: 3000000 INFO @ Fri, 10 Dec 2021 18:34:30: 9000000 INFO @ Fri, 10 Dec 2021 18:34:35: 4000000 INFO @ Fri, 10 Dec 2021 18:34:36: 10000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 10 Dec 2021 18:34:40: 5000000 INFO @ Fri, 10 Dec 2021 18:34:41: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX7175260/SRX7175260.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX7175260/SRX7175260.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX7175260/SRX7175260.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX7175260/SRX7175260.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 10 Dec 2021 18:34:41: #1 read tag files... INFO @ Fri, 10 Dec 2021 18:34:41: #1 read treatment tags... INFO @ Fri, 10 Dec 2021 18:34:42: 11000000 INFO @ Fri, 10 Dec 2021 18:34:46: 6000000 INFO @ Fri, 10 Dec 2021 18:34:48: 1000000 INFO @ Fri, 10 Dec 2021 18:34:48: 12000000 INFO @ Fri, 10 Dec 2021 18:34:52: 7000000 INFO @ Fri, 10 Dec 2021 18:34:54: 2000000 INFO @ Fri, 10 Dec 2021 18:34:54: 13000000 INFO @ Fri, 10 Dec 2021 18:34:58: 8000000 INFO @ Fri, 10 Dec 2021 18:35:00: 3000000 INFO @ Fri, 10 Dec 2021 18:35:00: 14000000 INFO @ Fri, 10 Dec 2021 18:35:04: 9000000 INFO @ Fri, 10 Dec 2021 18:35:06: 4000000 INFO @ Fri, 10 Dec 2021 18:35:06: 15000000 INFO @ Fri, 10 Dec 2021 18:35:10: 10000000 INFO @ Fri, 10 Dec 2021 18:35:12: 5000000 INFO @ Fri, 10 Dec 2021 18:35:12: 16000000 INFO @ Fri, 10 Dec 2021 18:35:16: 11000000 INFO @ Fri, 10 Dec 2021 18:35:18: 6000000 INFO @ Fri, 10 Dec 2021 18:35:18: 17000000 INFO @ Fri, 10 Dec 2021 18:35:22: 12000000 INFO @ Fri, 10 Dec 2021 18:35:24: 7000000 INFO @ Fri, 10 Dec 2021 18:35:24: 18000000 INFO @ Fri, 10 Dec 2021 18:35:28: 13000000 INFO @ Fri, 10 Dec 2021 18:35:30: 8000000 INFO @ Fri, 10 Dec 2021 18:35:30: 19000000 INFO @ Fri, 10 Dec 2021 18:35:34: 14000000 INFO @ Fri, 10 Dec 2021 18:35:36: 20000000 INFO @ Fri, 10 Dec 2021 18:35:36: 9000000 INFO @ Fri, 10 Dec 2021 18:35:40: 15000000 INFO @ Fri, 10 Dec 2021 18:35:41: 21000000 INFO @ Fri, 10 Dec 2021 18:35:42: 10000000 INFO @ Fri, 10 Dec 2021 18:35:46: 16000000 INFO @ Fri, 10 Dec 2021 18:35:47: 22000000 INFO @ Fri, 10 Dec 2021 18:35:48: 11000000 INFO @ Fri, 10 Dec 2021 18:35:52: 17000000 INFO @ Fri, 10 Dec 2021 18:35:53: 23000000 INFO @ Fri, 10 Dec 2021 18:35:54: 12000000 INFO @ Fri, 10 Dec 2021 18:35:58: 18000000 INFO @ Fri, 10 Dec 2021 18:35:59: 24000000 INFO @ Fri, 10 Dec 2021 18:36:00: 13000000 INFO @ Fri, 10 Dec 2021 18:36:04: 19000000 INFO @ Fri, 10 Dec 2021 18:36:05: 25000000 INFO @ Fri, 10 Dec 2021 18:36:06: 14000000 INFO @ Fri, 10 Dec 2021 18:36:10: 20000000 INFO @ Fri, 10 Dec 2021 18:36:11: 26000000 INFO @ Fri, 10 Dec 2021 18:36:12: 15000000 INFO @ Fri, 10 Dec 2021 18:36:16: 21000000 INFO @ Fri, 10 Dec 2021 18:36:17: 27000000 INFO @ Fri, 10 Dec 2021 18:36:18: 16000000 INFO @ Fri, 10 Dec 2021 18:36:22: 22000000 INFO @ Fri, 10 Dec 2021 18:36:23: 28000000 INFO @ Fri, 10 Dec 2021 18:36:24: 17000000 INFO @ Fri, 10 Dec 2021 18:36:28: 23000000 INFO @ Fri, 10 Dec 2021 18:36:29: 29000000 INFO @ Fri, 10 Dec 2021 18:36:30: 18000000 INFO @ Fri, 10 Dec 2021 18:36:33: 24000000 INFO @ Fri, 10 Dec 2021 18:36:35: 30000000 INFO @ Fri, 10 Dec 2021 18:36:35: 19000000 INFO @ Fri, 10 Dec 2021 18:36:39: 25000000 INFO @ Fri, 10 Dec 2021 18:36:41: 31000000 INFO @ Fri, 10 Dec 2021 18:36:41: 20000000 INFO @ Fri, 10 Dec 2021 18:36:45: 26000000 INFO @ Fri, 10 Dec 2021 18:36:47: 32000000 INFO @ Fri, 10 Dec 2021 18:36:47: 21000000 INFO @ Fri, 10 Dec 2021 18:36:51: 27000000 INFO @ Fri, 10 Dec 2021 18:36:53: 33000000 INFO @ Fri, 10 Dec 2021 18:36:53: 22000000 INFO @ Fri, 10 Dec 2021 18:36:57: 28000000 INFO @ Fri, 10 Dec 2021 18:36:58: 34000000 INFO @ Fri, 10 Dec 2021 18:36:59: 23000000 INFO @ Fri, 10 Dec 2021 18:37:03: 29000000 INFO @ Fri, 10 Dec 2021 18:37:04: 35000000 INFO @ Fri, 10 Dec 2021 18:37:05: 24000000 INFO @ Fri, 10 Dec 2021 18:37:09: 30000000 INFO @ Fri, 10 Dec 2021 18:37:10: 36000000 INFO @ Fri, 10 Dec 2021 18:37:11: 25000000 INFO @ Fri, 10 Dec 2021 18:37:15: 31000000 INFO @ Fri, 10 Dec 2021 18:37:16: 37000000 INFO @ Fri, 10 Dec 2021 18:37:17: 26000000 INFO @ Fri, 10 Dec 2021 18:37:21: 32000000 INFO @ Fri, 10 Dec 2021 18:37:22: 38000000 INFO @ Fri, 10 Dec 2021 18:37:23: 27000000 INFO @ Fri, 10 Dec 2021 18:37:27: 33000000 INFO @ Fri, 10 Dec 2021 18:37:28: 39000000 INFO @ Fri, 10 Dec 2021 18:37:29: 28000000 INFO @ Fri, 10 Dec 2021 18:37:33: 34000000 INFO @ Fri, 10 Dec 2021 18:37:34: 40000000 INFO @ Fri, 10 Dec 2021 18:37:35: 29000000 INFO @ Fri, 10 Dec 2021 18:37:39: 35000000 INFO @ Fri, 10 Dec 2021 18:37:40: 41000000 INFO @ Fri, 10 Dec 2021 18:37:41: 30000000 INFO @ Fri, 10 Dec 2021 18:37:44: 36000000 INFO @ Fri, 10 Dec 2021 18:37:46: 42000000 INFO @ Fri, 10 Dec 2021 18:37:47: 31000000 INFO @ Fri, 10 Dec 2021 18:37:50: 37000000 INFO @ Fri, 10 Dec 2021 18:37:52: 43000000 INFO @ Fri, 10 Dec 2021 18:37:52: 32000000 INFO @ Fri, 10 Dec 2021 18:37:56: 38000000 INFO @ Fri, 10 Dec 2021 18:37:58: 44000000 INFO @ Fri, 10 Dec 2021 18:37:58: 33000000 INFO @ Fri, 10 Dec 2021 18:38:02: 39000000 INFO @ Fri, 10 Dec 2021 18:38:04: 45000000 INFO @ Fri, 10 Dec 2021 18:38:04: 34000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Fri, 10 Dec 2021 18:38:08: 40000000 INFO @ Fri, 10 Dec 2021 18:38:10: 46000000 INFO @ Fri, 10 Dec 2021 18:38:10: 35000000 INFO @ Fri, 10 Dec 2021 18:38:14: 41000000 INFO @ Fri, 10 Dec 2021 18:38:16: 47000000 INFO @ Fri, 10 Dec 2021 18:38:16: 36000000 INFO @ Fri, 10 Dec 2021 18:38:20: 42000000 INFO @ Fri, 10 Dec 2021 18:38:22: 48000000 INFO @ Fri, 10 Dec 2021 18:38:22: 37000000 INFO @ Fri, 10 Dec 2021 18:38:26: 43000000 INFO @ Fri, 10 Dec 2021 18:38:28: 49000000 INFO @ Fri, 10 Dec 2021 18:38:28: 38000000 INFO @ Fri, 10 Dec 2021 18:38:32: 44000000 INFO @ Fri, 10 Dec 2021 18:38:34: 50000000 INFO @ Fri, 10 Dec 2021 18:38:34: 39000000 INFO @ Fri, 10 Dec 2021 18:38:38: 45000000 INFO @ Fri, 10 Dec 2021 18:38:38: #1 tag size is determined as 75 bps INFO @ Fri, 10 Dec 2021 18:38:38: #1 tag size = 75 INFO @ Fri, 10 Dec 2021 18:38:38: #1 total tags in treatment: 23998422 INFO @ Fri, 10 Dec 2021 18:38:38: #1 user defined the maximum tags... INFO @ Fri, 10 Dec 2021 18:38:38: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 10 Dec 2021 18:38:39: #1 tags after filtering in treatment: 21444197 INFO @ Fri, 10 Dec 2021 18:38:39: #1 Redundant rate of treatment: 0.11 INFO @ Fri, 10 Dec 2021 18:38:39: #1 finished! INFO @ Fri, 10 Dec 2021 18:38:39: #2 Build Peak Model... INFO @ Fri, 10 Dec 2021 18:38:39: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 10 Dec 2021 18:38:40: #2 number of paired peaks: 380 WARNING @ Fri, 10 Dec 2021 18:38:40: Fewer paired peaks (380) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 380 pairs to build model! INFO @ Fri, 10 Dec 2021 18:38:40: start model_add_line... INFO @ Fri, 10 Dec 2021 18:38:40: start X-correlation... INFO @ Fri, 10 Dec 2021 18:38:40: end of X-cor INFO @ Fri, 10 Dec 2021 18:38:40: #2 finished! INFO @ Fri, 10 Dec 2021 18:38:40: #2 predicted fragment length is 194 bps INFO @ Fri, 10 Dec 2021 18:38:40: #2 alternative fragment length(s) may be 194 bps INFO @ Fri, 10 Dec 2021 18:38:40: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX7175260/SRX7175260.05_model.r INFO @ Fri, 10 Dec 2021 18:38:40: #3 Call peaks... INFO @ Fri, 10 Dec 2021 18:38:40: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 10 Dec 2021 18:38:40: 40000000 INFO @ Fri, 10 Dec 2021 18:38:44: 46000000 INFO @ Fri, 10 Dec 2021 18:38:46: 41000000 INFO @ Fri, 10 Dec 2021 18:38:50: 47000000 INFO @ Fri, 10 Dec 2021 18:38:52: 42000000 INFO @ Fri, 10 Dec 2021 18:38:56: 48000000 INFO @ Fri, 10 Dec 2021 18:38:58: 43000000 INFO @ Fri, 10 Dec 2021 18:39:01: 49000000 INFO @ Fri, 10 Dec 2021 18:39:04: 44000000 INFO @ Fri, 10 Dec 2021 18:39:07: 50000000 INFO @ Fri, 10 Dec 2021 18:39:10: 45000000 INFO @ Fri, 10 Dec 2021 18:39:12: #1 tag size is determined as 75 bps INFO @ Fri, 10 Dec 2021 18:39:12: #1 tag size = 75 INFO @ Fri, 10 Dec 2021 18:39:12: #1 total tags in treatment: 23998422 INFO @ Fri, 10 Dec 2021 18:39:12: #1 user defined the maximum tags... INFO @ Fri, 10 Dec 2021 18:39:12: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 10 Dec 2021 18:39:12: #1 tags after filtering in treatment: 21444197 INFO @ Fri, 10 Dec 2021 18:39:12: #1 Redundant rate of treatment: 0.11 INFO @ Fri, 10 Dec 2021 18:39:12: #1 finished! INFO @ Fri, 10 Dec 2021 18:39:12: #2 Build Peak Model... INFO @ Fri, 10 Dec 2021 18:39:12: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 10 Dec 2021 18:39:14: #2 number of paired peaks: 380 WARNING @ Fri, 10 Dec 2021 18:39:14: Fewer paired peaks (380) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 380 pairs to build model! INFO @ Fri, 10 Dec 2021 18:39:14: start model_add_line... INFO @ Fri, 10 Dec 2021 18:39:14: start X-correlation... INFO @ Fri, 10 Dec 2021 18:39:14: end of X-cor INFO @ Fri, 10 Dec 2021 18:39:14: #2 finished! INFO @ Fri, 10 Dec 2021 18:39:14: #2 predicted fragment length is 194 bps INFO @ Fri, 10 Dec 2021 18:39:14: #2 alternative fragment length(s) may be 194 bps INFO @ Fri, 10 Dec 2021 18:39:14: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX7175260/SRX7175260.10_model.r INFO @ Fri, 10 Dec 2021 18:39:14: #3 Call peaks... INFO @ Fri, 10 Dec 2021 18:39:14: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 10 Dec 2021 18:39:15: 46000000 INFO @ Fri, 10 Dec 2021 18:39:21: #3 Call peaks for each chromosome... INFO @ Fri, 10 Dec 2021 18:39:21: 47000000 INFO @ Fri, 10 Dec 2021 18:39:27: 48000000 BigWig に変換しました。 INFO @ Fri, 10 Dec 2021 18:39:32: 49000000 INFO @ Fri, 10 Dec 2021 18:39:38: 50000000 INFO @ Fri, 10 Dec 2021 18:39:40: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX7175260/SRX7175260.05_peaks.xls INFO @ Fri, 10 Dec 2021 18:39:40: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX7175260/SRX7175260.05_peaks.narrowPeak INFO @ Fri, 10 Dec 2021 18:39:40: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX7175260/SRX7175260.05_summits.bed INFO @ Fri, 10 Dec 2021 18:39:40: Done! pass1 - making usageList (15 chroms): 2 millis pass2 - checking and writing primary data (11071 records, 4 fields): 11 millis CompletedMACS2peakCalling INFO @ Fri, 10 Dec 2021 18:39:42: #1 tag size is determined as 75 bps INFO @ Fri, 10 Dec 2021 18:39:42: #1 tag size = 75 INFO @ Fri, 10 Dec 2021 18:39:42: #1 total tags in treatment: 23998422 INFO @ Fri, 10 Dec 2021 18:39:42: #1 user defined the maximum tags... INFO @ Fri, 10 Dec 2021 18:39:42: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 10 Dec 2021 18:39:42: #1 tags after filtering in treatment: 21444197 INFO @ Fri, 10 Dec 2021 18:39:42: #1 Redundant rate of treatment: 0.11 INFO @ Fri, 10 Dec 2021 18:39:42: #1 finished! INFO @ Fri, 10 Dec 2021 18:39:42: #2 Build Peak Model... INFO @ Fri, 10 Dec 2021 18:39:42: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 10 Dec 2021 18:39:44: #2 number of paired peaks: 380 WARNING @ Fri, 10 Dec 2021 18:39:44: Fewer paired peaks (380) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 380 pairs to build model! INFO @ Fri, 10 Dec 2021 18:39:44: start model_add_line... INFO @ Fri, 10 Dec 2021 18:39:44: start X-correlation... INFO @ Fri, 10 Dec 2021 18:39:44: end of X-cor INFO @ Fri, 10 Dec 2021 18:39:44: #2 finished! INFO @ Fri, 10 Dec 2021 18:39:44: #2 predicted fragment length is 194 bps INFO @ Fri, 10 Dec 2021 18:39:44: #2 alternative fragment length(s) may be 194 bps INFO @ Fri, 10 Dec 2021 18:39:44: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX7175260/SRX7175260.20_model.r INFO @ Fri, 10 Dec 2021 18:39:44: #3 Call peaks... INFO @ Fri, 10 Dec 2021 18:39:44: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 10 Dec 2021 18:39:53: #3 Call peaks for each chromosome... INFO @ Fri, 10 Dec 2021 18:40:13: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX7175260/SRX7175260.10_peaks.xls INFO @ Fri, 10 Dec 2021 18:40:13: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX7175260/SRX7175260.10_peaks.narrowPeak INFO @ Fri, 10 Dec 2021 18:40:13: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX7175260/SRX7175260.10_summits.bed INFO @ Fri, 10 Dec 2021 18:40:13: Done! pass1 - making usageList (15 chroms): 1 millis pass2 - checking and writing primary data (6955 records, 4 fields): 8 millis CompletedMACS2peakCalling INFO @ Fri, 10 Dec 2021 18:40:25: #3 Call peaks for each chromosome... INFO @ Fri, 10 Dec 2021 18:40:44: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX7175260/SRX7175260.20_peaks.xls INFO @ Fri, 10 Dec 2021 18:40:44: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX7175260/SRX7175260.20_peaks.narrowPeak INFO @ Fri, 10 Dec 2021 18:40:44: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX7175260/SRX7175260.20_summits.bed INFO @ Fri, 10 Dec 2021 18:40:44: Done! pass1 - making usageList (15 chroms): 1 millis pass2 - checking and writing primary data (3344 records, 4 fields): 5 millis CompletedMACS2peakCalling