Job ID = 3785927 sra ファイルのダウンロード中... Read layout: SINGLE fastq に変換中... 2019-11-01T05:37:42 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:37:42 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:37:42 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:37:55 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:39:20 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:39:36 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:39:46 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:40:18 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:41:53 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:41:56 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:42:20 fasterq-dump.2.9.6 sys: error unknown while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:43:10 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:44:12 fasterq-dump.2.9.6 sys: error unknown while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:44:21 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:45:14 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:45:15 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:46:16 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:46:45 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:46:53 fasterq-dump.2.9.6 sys: error unknown while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:47:13 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:47:13 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:47:13 fasterq-dump.2.9.6 sys: error unknown while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:47:58 fasterq-dump.2.9.6 sys: error unknown while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:48:25 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:49:32 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:49:57 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:50:18 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:50:46 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:50:46 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:52:33 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:53:11 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:53:13 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:53:15 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:55:22 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:55:22 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:55:22 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:55:25 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:57:08 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:57:44 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:57:44 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:57:44 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:58:57 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:59:02 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:59:09 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:59:09 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T06:00:39 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T06:02:40 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T06:03:36 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T06:18:32 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T06:18:37 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T06:21:48 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T06:24:35 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) spots read : 122,784,627 reads read : 122,784,627 reads written : 122,784,627 rm: cannot remove ‘[DSE]RR*’: No such file or directory fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:37:15 122784627 reads; of these: 122784627 (100.00%) were unpaired; of these: 37049228 (30.17%) aligned 0 times 73448678 (59.82%) aligned exactly 1 time 12286721 (10.01%) aligned >1 times 69.83% overall alignment rate Time searching: 00:37:15 Overall time: 00:37:15 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 36 files... [bam_rmdupse_core] 33636461 / 85735399 = 0.3923 in library ' ' BAM に変換しました。 Bed ファイルを作成中... INFO @ Fri, 01 Nov 2019 17:00:45: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX6827252/SRX6827252.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX6827252/SRX6827252.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX6827252/SRX6827252.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX6827252/SRX6827252.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 01 Nov 2019 17:00:45: #1 read tag files... INFO @ Fri, 01 Nov 2019 17:00:45: #1 read treatment tags... INFO @ Fri, 01 Nov 2019 17:00:56: 1000000 INFO @ Fri, 01 Nov 2019 17:01:06: 2000000 INFO @ Fri, 01 Nov 2019 17:01:15: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX6827252/SRX6827252.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX6827252/SRX6827252.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX6827252/SRX6827252.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX6827252/SRX6827252.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 01 Nov 2019 17:01:15: #1 read tag files... INFO @ Fri, 01 Nov 2019 17:01:15: #1 read treatment tags... INFO @ Fri, 01 Nov 2019 17:01:16: 3000000 INFO @ Fri, 01 Nov 2019 17:01:27: 1000000 INFO @ Fri, 01 Nov 2019 17:01:27: 4000000 INFO @ Fri, 01 Nov 2019 17:01:38: 2000000 INFO @ Fri, 01 Nov 2019 17:01:39: 5000000 BedGraph に変換中... INFO @ Fri, 01 Nov 2019 17:01:45: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX6827252/SRX6827252.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX6827252/SRX6827252.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX6827252/SRX6827252.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX6827252/SRX6827252.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 01 Nov 2019 17:01:45: #1 read tag files... INFO @ Fri, 01 Nov 2019 17:01:45: #1 read treatment tags... INFO @ Fri, 01 Nov 2019 17:01:50: 3000000 INFO @ Fri, 01 Nov 2019 17:01:50: 6000000 INFO @ Fri, 01 Nov 2019 17:01:55: 1000000 INFO @ Fri, 01 Nov 2019 17:02:02: 4000000 INFO @ Fri, 01 Nov 2019 17:02:02: 7000000 INFO @ Fri, 01 Nov 2019 17:02:05: 2000000 INFO @ Fri, 01 Nov 2019 17:02:13: 5000000 INFO @ Fri, 01 Nov 2019 17:02:14: 8000000 INFO @ Fri, 01 Nov 2019 17:02:15: 3000000 INFO @ Fri, 01 Nov 2019 17:02:25: 6000000 INFO @ Fri, 01 Nov 2019 17:02:25: 4000000 INFO @ Fri, 01 Nov 2019 17:02:26: 9000000 INFO @ Fri, 01 Nov 2019 17:02:36: 5000000 INFO @ Fri, 01 Nov 2019 17:02:37: 7000000 INFO @ Fri, 01 Nov 2019 17:02:38: 10000000 INFO @ Fri, 01 Nov 2019 17:02:46: 6000000 INFO @ Fri, 01 Nov 2019 17:02:49: 8000000 INFO @ Fri, 01 Nov 2019 17:02:49: 11000000 INFO @ Fri, 01 Nov 2019 17:02:56: 7000000 INFO @ Fri, 01 Nov 2019 17:03:00: 9000000 INFO @ Fri, 01 Nov 2019 17:03:01: 12000000 INFO @ Fri, 01 Nov 2019 17:03:06: 8000000 INFO @ Fri, 01 Nov 2019 17:03:12: 10000000 INFO @ Fri, 01 Nov 2019 17:03:13: 13000000 INFO @ Fri, 01 Nov 2019 17:03:16: 9000000 INFO @ Fri, 01 Nov 2019 17:03:24: 11000000 INFO @ Fri, 01 Nov 2019 17:03:24: 14000000 INFO @ Fri, 01 Nov 2019 17:03:26: 10000000 INFO @ Fri, 01 Nov 2019 17:03:35: 12000000 INFO @ Fri, 01 Nov 2019 17:03:36: 15000000 INFO @ Fri, 01 Nov 2019 17:03:36: 11000000 INFO @ Fri, 01 Nov 2019 17:03:43: 13000000 INFO @ Fri, 01 Nov 2019 17:03:46: 12000000 INFO @ Fri, 01 Nov 2019 17:03:46: 16000000 INFO @ Fri, 01 Nov 2019 17:03:51: 14000000 INFO @ Fri, 01 Nov 2019 17:03:56: 13000000 INFO @ Fri, 01 Nov 2019 17:03:57: 17000000 INFO @ Fri, 01 Nov 2019 17:03:59: 15000000 INFO @ Fri, 01 Nov 2019 17:04:06: 14000000 INFO @ Fri, 01 Nov 2019 17:04:07: 18000000 INFO @ Fri, 01 Nov 2019 17:04:08: 16000000 INFO @ Fri, 01 Nov 2019 17:04:16: 15000000 INFO @ Fri, 01 Nov 2019 17:04:16: 17000000 INFO @ Fri, 01 Nov 2019 17:04:17: 19000000 INFO @ Fri, 01 Nov 2019 17:04:24: 18000000 INFO @ Fri, 01 Nov 2019 17:04:25: 20000000 INFO @ Fri, 01 Nov 2019 17:04:26: 16000000 INFO @ Fri, 01 Nov 2019 17:04:32: 19000000 INFO @ Fri, 01 Nov 2019 17:04:34: 21000000 INFO @ Fri, 01 Nov 2019 17:04:36: 17000000 INFO @ Fri, 01 Nov 2019 17:04:40: 20000000 INFO @ Fri, 01 Nov 2019 17:04:43: 22000000 INFO @ Fri, 01 Nov 2019 17:04:46: 18000000 INFO @ Fri, 01 Nov 2019 17:04:48: 21000000 INFO @ Fri, 01 Nov 2019 17:04:51: 23000000 INFO @ Fri, 01 Nov 2019 17:04:55: 19000000 INFO @ Fri, 01 Nov 2019 17:04:56: 22000000 INFO @ Fri, 01 Nov 2019 17:05:00: 24000000 INFO @ Fri, 01 Nov 2019 17:05:04: 23000000 INFO @ Fri, 01 Nov 2019 17:05:05: 20000000 INFO @ Fri, 01 Nov 2019 17:05:08: 25000000 INFO @ Fri, 01 Nov 2019 17:05:12: 24000000 INFO @ Fri, 01 Nov 2019 17:05:15: 21000000 INFO @ Fri, 01 Nov 2019 17:05:18: 26000000 INFO @ Fri, 01 Nov 2019 17:05:19: 25000000 INFO @ Fri, 01 Nov 2019 17:05:25: 22000000 INFO @ Fri, 01 Nov 2019 17:05:26: 27000000 INFO @ Fri, 01 Nov 2019 17:05:28: 26000000 INFO @ Fri, 01 Nov 2019 17:05:35: 28000000 INFO @ Fri, 01 Nov 2019 17:05:35: 23000000 INFO @ Fri, 01 Nov 2019 17:05:36: 27000000 INFO @ Fri, 01 Nov 2019 17:05:44: 29000000 INFO @ Fri, 01 Nov 2019 17:05:44: 28000000 INFO @ Fri, 01 Nov 2019 17:05:45: 24000000 INFO @ Fri, 01 Nov 2019 17:05:52: 29000000 INFO @ Fri, 01 Nov 2019 17:05:52: 30000000 INFO @ Fri, 01 Nov 2019 17:05:55: 25000000 INFO @ Fri, 01 Nov 2019 17:05:59: 30000000 INFO @ Fri, 01 Nov 2019 17:06:01: 31000000 INFO @ Fri, 01 Nov 2019 17:06:04: 26000000 INFO @ Fri, 01 Nov 2019 17:06:07: 31000000 INFO @ Fri, 01 Nov 2019 17:06:09: 32000000 INFO @ Fri, 01 Nov 2019 17:06:14: 27000000 INFO @ Fri, 01 Nov 2019 17:06:15: 32000000 INFO @ Fri, 01 Nov 2019 17:06:18: 33000000 INFO @ Fri, 01 Nov 2019 17:06:23: 33000000 INFO @ Fri, 01 Nov 2019 17:06:24: 28000000 INFO @ Fri, 01 Nov 2019 17:06:27: 34000000 INFO @ Fri, 01 Nov 2019 17:06:30: 34000000 INFO @ Fri, 01 Nov 2019 17:06:34: 29000000 INFO @ Fri, 01 Nov 2019 17:06:35: 35000000 INFO @ Fri, 01 Nov 2019 17:06:38: 35000000 INFO @ Fri, 01 Nov 2019 17:06:44: 30000000 INFO @ Fri, 01 Nov 2019 17:06:44: 36000000 INFO @ Fri, 01 Nov 2019 17:06:46: 36000000 INFO @ Fri, 01 Nov 2019 17:06:52: 37000000 INFO @ Fri, 01 Nov 2019 17:06:54: 31000000 INFO @ Fri, 01 Nov 2019 17:06:54: 37000000 INFO @ Fri, 01 Nov 2019 17:07:01: 38000000 INFO @ Fri, 01 Nov 2019 17:07:02: 38000000 INFO @ Fri, 01 Nov 2019 17:07:03: 32000000 INFO @ Fri, 01 Nov 2019 17:07:10: 39000000 INFO @ Fri, 01 Nov 2019 17:07:11: 39000000 INFO @ Fri, 01 Nov 2019 17:07:13: 33000000 INFO @ Fri, 01 Nov 2019 17:07:19: 40000000 INFO @ Fri, 01 Nov 2019 17:07:20: 40000000 INFO @ Fri, 01 Nov 2019 17:07:23: 34000000 INFO @ Fri, 01 Nov 2019 17:07:27: 41000000 INFO @ Fri, 01 Nov 2019 17:07:29: 41000000 INFO @ Fri, 01 Nov 2019 17:07:33: 35000000 INFO @ Fri, 01 Nov 2019 17:07:35: 42000000 INFO @ Fri, 01 Nov 2019 17:07:39: 42000000 INFO @ Fri, 01 Nov 2019 17:07:42: 36000000 INFO @ Fri, 01 Nov 2019 17:07:43: 43000000 INFO @ Fri, 01 Nov 2019 17:07:48: 43000000 INFO @ Fri, 01 Nov 2019 17:07:51: 44000000 INFO @ Fri, 01 Nov 2019 17:07:52: 37000000 INFO @ Fri, 01 Nov 2019 17:07:57: 44000000 INFO @ Fri, 01 Nov 2019 17:07:59: 45000000 INFO @ Fri, 01 Nov 2019 17:08:02: 38000000 INFO @ Fri, 01 Nov 2019 17:08:06: 45000000 INFO @ Fri, 01 Nov 2019 17:08:07: 46000000 INFO @ Fri, 01 Nov 2019 17:08:13: 39000000 INFO @ Fri, 01 Nov 2019 17:08:15: 46000000 INFO @ Fri, 01 Nov 2019 17:08:15: 47000000 INFO @ Fri, 01 Nov 2019 17:08:23: 48000000 INFO @ Fri, 01 Nov 2019 17:08:24: 47000000 INFO @ Fri, 01 Nov 2019 17:08:24: 40000000 INFO @ Fri, 01 Nov 2019 17:08:31: 49000000 INFO @ Fri, 01 Nov 2019 17:08:33: 48000000 INFO @ Fri, 01 Nov 2019 17:08:34: 41000000 INFO @ Fri, 01 Nov 2019 17:08:39: 50000000 INFO @ Fri, 01 Nov 2019 17:08:41: 49000000 INFO @ Fri, 01 Nov 2019 17:08:45: 42000000 INFO @ Fri, 01 Nov 2019 17:08:47: 51000000 INFO @ Fri, 01 Nov 2019 17:08:50: 50000000 INFO @ Fri, 01 Nov 2019 17:08:55: 52000000 INFO @ Fri, 01 Nov 2019 17:08:55: 43000000 INFO @ Fri, 01 Nov 2019 17:08:56: #1 tag size is determined as 51 bps INFO @ Fri, 01 Nov 2019 17:08:56: #1 tag size = 51 INFO @ Fri, 01 Nov 2019 17:08:56: #1 total tags in treatment: 52098938 INFO @ Fri, 01 Nov 2019 17:08:56: #1 user defined the maximum tags... INFO @ Fri, 01 Nov 2019 17:08:56: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 01 Nov 2019 17:08:58: #1 tags after filtering in treatment: 52098938 INFO @ Fri, 01 Nov 2019 17:08:58: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 01 Nov 2019 17:08:58: #1 finished! INFO @ Fri, 01 Nov 2019 17:08:58: #2 Build Peak Model... INFO @ Fri, 01 Nov 2019 17:08:58: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 01 Nov 2019 17:08:59: 51000000 INFO @ Fri, 01 Nov 2019 17:09:02: #2 number of paired peaks: 0 WARNING @ Fri, 01 Nov 2019 17:09:02: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Fri, 01 Nov 2019 17:09:02: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/dm3/SRX6827252/SRX6827252.10_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX6827252/SRX6827252.10_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX6827252/SRX6827252.10_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX6827252/SRX6827252.10_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Fri, 01 Nov 2019 17:09:06: 44000000 INFO @ Fri, 01 Nov 2019 17:09:08: 52000000 INFO @ Fri, 01 Nov 2019 17:09:09: #1 tag size is determined as 51 bps INFO @ Fri, 01 Nov 2019 17:09:09: #1 tag size = 51 INFO @ Fri, 01 Nov 2019 17:09:09: #1 total tags in treatment: 52098938 INFO @ Fri, 01 Nov 2019 17:09:09: #1 user defined the maximum tags... INFO @ Fri, 01 Nov 2019 17:09:09: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 01 Nov 2019 17:09:10: #1 tags after filtering in treatment: 52098938 INFO @ Fri, 01 Nov 2019 17:09:10: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 01 Nov 2019 17:09:10: #1 finished! INFO @ Fri, 01 Nov 2019 17:09:10: #2 Build Peak Model... INFO @ Fri, 01 Nov 2019 17:09:10: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 01 Nov 2019 17:09:15: #2 number of paired peaks: 0 WARNING @ Fri, 01 Nov 2019 17:09:15: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Fri, 01 Nov 2019 17:09:15: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/dm3/SRX6827252/SRX6827252.05_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 2 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX6827252/SRX6827252.05_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX6827252/SRX6827252.05_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX6827252/SRX6827252.05_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Fri, 01 Nov 2019 17:09:16: 45000000 INFO @ Fri, 01 Nov 2019 17:09:25: 46000000 INFO @ Fri, 01 Nov 2019 17:09:35: 47000000 INFO @ Fri, 01 Nov 2019 17:09:45: 48000000 INFO @ Fri, 01 Nov 2019 17:09:55: 49000000 INFO @ Fri, 01 Nov 2019 17:10:05: 50000000 INFO @ Fri, 01 Nov 2019 17:10:14: 51000000 INFO @ Fri, 01 Nov 2019 17:10:24: 52000000 INFO @ Fri, 01 Nov 2019 17:10:25: #1 tag size is determined as 51 bps INFO @ Fri, 01 Nov 2019 17:10:25: #1 tag size = 51 INFO @ Fri, 01 Nov 2019 17:10:25: #1 total tags in treatment: 52098938 INFO @ Fri, 01 Nov 2019 17:10:25: #1 user defined the maximum tags... INFO @ Fri, 01 Nov 2019 17:10:25: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 01 Nov 2019 17:10:26: #1 tags after filtering in treatment: 52098938 INFO @ Fri, 01 Nov 2019 17:10:26: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 01 Nov 2019 17:10:26: #1 finished! INFO @ Fri, 01 Nov 2019 17:10:26: #2 Build Peak Model... INFO @ Fri, 01 Nov 2019 17:10:26: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 01 Nov 2019 17:10:31: #2 number of paired peaks: 0 WARNING @ Fri, 01 Nov 2019 17:10:31: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Fri, 01 Nov 2019 17:10:31: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/dm3/SRX6827252/SRX6827252.20_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX6827252/SRX6827252.20_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX6827252/SRX6827252.20_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX6827252/SRX6827252.20_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。