Job ID = 12265383 SRX = SRX6817536 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 41321728 spots for SRR10084527/SRR10084527.sra Written 41321728 spots for SRR10084527/SRR10084527.sra fastq に変換しました。 bowtie でマッピング中... Your job 12267165 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 02:41:25 41321728 reads; of these: 41321728 (100.00%) were paired; of these: 19028993 (46.05%) aligned concordantly 0 times 15897322 (38.47%) aligned concordantly exactly 1 time 6395413 (15.48%) aligned concordantly >1 times ---- 19028993 pairs aligned concordantly 0 times; of these: 5078854 (26.69%) aligned discordantly 1 time ---- 13950139 pairs aligned 0 times concordantly or discordantly; of these: 27900278 mates make up the pairs; of these: 21663742 (77.65%) aligned 0 times 1912075 (6.85%) aligned exactly 1 time 4324461 (15.50%) aligned >1 times 73.79% overall alignment rate Time searching: 02:41:25 Overall time: 02:41:25 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 48 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 7619351 / 27230253 = 0.2798 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 10:16:52: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX6817536/SRX6817536.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX6817536/SRX6817536.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX6817536/SRX6817536.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX6817536/SRX6817536.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 10:16:52: #1 read tag files... INFO @ Sat, 03 Apr 2021 10:16:52: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 10:16:59: 1000000 INFO @ Sat, 03 Apr 2021 10:17:08: 2000000 INFO @ Sat, 03 Apr 2021 10:17:15: 3000000 WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 10:17:22: 4000000 INFO @ Sat, 03 Apr 2021 10:17:22: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX6817536/SRX6817536.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX6817536/SRX6817536.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX6817536/SRX6817536.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX6817536/SRX6817536.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 10:17:22: #1 read tag files... INFO @ Sat, 03 Apr 2021 10:17:22: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 10:17:30: 5000000 INFO @ Sat, 03 Apr 2021 10:17:31: 1000000 INFO @ Sat, 03 Apr 2021 10:17:38: 6000000 INFO @ Sat, 03 Apr 2021 10:17:40: 2000000 INFO @ Sat, 03 Apr 2021 10:17:45: 7000000 INFO @ Sat, 03 Apr 2021 10:17:48: 3000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 10:17:52: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX6817536/SRX6817536.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX6817536/SRX6817536.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX6817536/SRX6817536.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX6817536/SRX6817536.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 10:17:52: #1 read tag files... INFO @ Sat, 03 Apr 2021 10:17:52: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 10:17:52: 8000000 INFO @ Sat, 03 Apr 2021 10:17:57: 4000000 INFO @ Sat, 03 Apr 2021 10:17:59: 9000000 INFO @ Sat, 03 Apr 2021 10:18:02: 1000000 INFO @ Sat, 03 Apr 2021 10:18:06: 5000000 INFO @ Sat, 03 Apr 2021 10:18:06: 10000000 INFO @ Sat, 03 Apr 2021 10:18:11: 2000000 INFO @ Sat, 03 Apr 2021 10:18:14: 11000000 INFO @ Sat, 03 Apr 2021 10:18:16: 6000000 INFO @ Sat, 03 Apr 2021 10:18:21: 12000000 INFO @ Sat, 03 Apr 2021 10:18:21: 3000000 INFO @ Sat, 03 Apr 2021 10:18:25: 7000000 INFO @ Sat, 03 Apr 2021 10:18:30: 13000000 INFO @ Sat, 03 Apr 2021 10:18:30: 4000000 INFO @ Sat, 03 Apr 2021 10:18:34: 8000000 INFO @ Sat, 03 Apr 2021 10:18:37: 14000000 INFO @ Sat, 03 Apr 2021 10:18:40: 5000000 INFO @ Sat, 03 Apr 2021 10:18:44: 9000000 INFO @ Sat, 03 Apr 2021 10:18:45: 15000000 INFO @ Sat, 03 Apr 2021 10:18:51: 6000000 INFO @ Sat, 03 Apr 2021 10:18:53: 16000000 INFO @ Sat, 03 Apr 2021 10:18:54: 10000000 INFO @ Sat, 03 Apr 2021 10:19:00: 17000000 INFO @ Sat, 03 Apr 2021 10:19:00: 7000000 INFO @ Sat, 03 Apr 2021 10:19:03: 11000000 INFO @ Sat, 03 Apr 2021 10:19:08: 18000000 INFO @ Sat, 03 Apr 2021 10:19:11: 8000000 INFO @ Sat, 03 Apr 2021 10:19:13: 12000000 INFO @ Sat, 03 Apr 2021 10:19:16: 19000000 INFO @ Sat, 03 Apr 2021 10:19:21: 9000000 INFO @ Sat, 03 Apr 2021 10:19:24: 20000000 INFO @ Sat, 03 Apr 2021 10:19:25: 13000000 INFO @ Sat, 03 Apr 2021 10:19:30: 10000000 INFO @ Sat, 03 Apr 2021 10:19:32: 21000000 INFO @ Sat, 03 Apr 2021 10:19:34: 14000000 INFO @ Sat, 03 Apr 2021 10:19:40: 11000000 INFO @ Sat, 03 Apr 2021 10:19:41: 22000000 INFO @ Sat, 03 Apr 2021 10:19:45: 15000000 INFO @ Sat, 03 Apr 2021 10:19:50: 23000000 INFO @ Sat, 03 Apr 2021 10:19:52: 12000000 INFO @ Sat, 03 Apr 2021 10:19:55: 16000000 INFO @ Sat, 03 Apr 2021 10:19:58: 24000000 INFO @ Sat, 03 Apr 2021 10:20:06: 13000000 INFO @ Sat, 03 Apr 2021 10:20:07: 17000000 INFO @ Sat, 03 Apr 2021 10:20:07: 25000000 INFO @ Sat, 03 Apr 2021 10:20:16: 26000000 INFO @ Sat, 03 Apr 2021 10:20:17: 18000000 INFO @ Sat, 03 Apr 2021 10:20:21: 14000000 INFO @ Sat, 03 Apr 2021 10:20:25: 27000000 INFO @ Sat, 03 Apr 2021 10:20:28: 19000000 INFO @ Sat, 03 Apr 2021 10:20:34: 28000000 INFO @ Sat, 03 Apr 2021 10:20:35: 15000000 INFO @ Sat, 03 Apr 2021 10:20:40: 20000000 INFO @ Sat, 03 Apr 2021 10:20:42: 29000000 INFO @ Sat, 03 Apr 2021 10:20:45: 16000000 INFO @ Sat, 03 Apr 2021 10:20:49: 30000000 INFO @ Sat, 03 Apr 2021 10:20:50: 21000000 INFO @ Sat, 03 Apr 2021 10:20:54: 17000000 INFO @ Sat, 03 Apr 2021 10:20:58: 31000000 INFO @ Sat, 03 Apr 2021 10:21:00: 22000000 INFO @ Sat, 03 Apr 2021 10:21:05: 18000000 INFO @ Sat, 03 Apr 2021 10:21:07: 32000000 INFO @ Sat, 03 Apr 2021 10:21:10: 23000000 INFO @ Sat, 03 Apr 2021 10:21:14: 19000000 INFO @ Sat, 03 Apr 2021 10:21:14: 33000000 INFO @ Sat, 03 Apr 2021 10:21:19: 24000000 INFO @ Sat, 03 Apr 2021 10:21:22: 34000000 INFO @ Sat, 03 Apr 2021 10:21:24: 20000000 INFO @ Sat, 03 Apr 2021 10:21:28: 25000000 INFO @ Sat, 03 Apr 2021 10:21:30: 35000000 INFO @ Sat, 03 Apr 2021 10:21:33: 21000000 INFO @ Sat, 03 Apr 2021 10:21:38: 26000000 INFO @ Sat, 03 Apr 2021 10:21:38: 36000000 INFO @ Sat, 03 Apr 2021 10:21:41: 22000000 INFO @ Sat, 03 Apr 2021 10:21:46: 37000000 INFO @ Sat, 03 Apr 2021 10:21:46: 27000000 INFO @ Sat, 03 Apr 2021 10:21:49: 23000000 INFO @ Sat, 03 Apr 2021 10:21:54: 28000000 INFO @ Sat, 03 Apr 2021 10:21:54: 38000000 INFO @ Sat, 03 Apr 2021 10:21:57: 24000000 INFO @ Sat, 03 Apr 2021 10:22:02: 29000000 INFO @ Sat, 03 Apr 2021 10:22:03: 39000000 INFO @ Sat, 03 Apr 2021 10:22:05: 25000000 INFO @ Sat, 03 Apr 2021 10:22:10: 30000000 INFO @ Sat, 03 Apr 2021 10:22:13: 40000000 INFO @ Sat, 03 Apr 2021 10:22:13: 26000000 INFO @ Sat, 03 Apr 2021 10:22:18: 31000000 INFO @ Sat, 03 Apr 2021 10:22:21: 41000000 INFO @ Sat, 03 Apr 2021 10:22:22: 27000000 INFO @ Sat, 03 Apr 2021 10:22:26: 32000000 INFO @ Sat, 03 Apr 2021 10:22:30: 28000000 INFO @ Sat, 03 Apr 2021 10:22:30: 42000000 INFO @ Sat, 03 Apr 2021 10:22:33: 33000000 INFO @ Sat, 03 Apr 2021 10:22:38: 29000000 INFO @ Sat, 03 Apr 2021 10:22:40: 43000000 INFO @ Sat, 03 Apr 2021 10:22:42: 34000000 INFO @ Sat, 03 Apr 2021 10:22:47: 30000000 INFO @ Sat, 03 Apr 2021 10:22:48: 44000000 INFO @ Sat, 03 Apr 2021 10:22:49: 35000000 INFO @ Sat, 03 Apr 2021 10:22:55: 31000000 INFO @ Sat, 03 Apr 2021 10:22:57: 45000000 INFO @ Sat, 03 Apr 2021 10:22:57: 36000000 INFO @ Sat, 03 Apr 2021 10:23:02: 32000000 INFO @ Sat, 03 Apr 2021 10:23:04: #1 tag size is determined as 150 bps INFO @ Sat, 03 Apr 2021 10:23:04: #1 tag size = 150 INFO @ Sat, 03 Apr 2021 10:23:04: #1 total tags in treatment: 15657802 INFO @ Sat, 03 Apr 2021 10:23:04: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 10:23:04: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 10:23:04: #1 tags after filtering in treatment: 12738222 INFO @ Sat, 03 Apr 2021 10:23:04: #1 Redundant rate of treatment: 0.19 INFO @ Sat, 03 Apr 2021 10:23:04: #1 finished! INFO @ Sat, 03 Apr 2021 10:23:04: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 10:23:04: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 10:23:05: 37000000 INFO @ Sat, 03 Apr 2021 10:23:05: #2 number of paired peaks: 226 WARNING @ Sat, 03 Apr 2021 10:23:05: Fewer paired peaks (226) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 226 pairs to build model! INFO @ Sat, 03 Apr 2021 10:23:05: start model_add_line... INFO @ Sat, 03 Apr 2021 10:23:05: start X-correlation... INFO @ Sat, 03 Apr 2021 10:23:05: end of X-cor INFO @ Sat, 03 Apr 2021 10:23:05: #2 finished! INFO @ Sat, 03 Apr 2021 10:23:05: #2 predicted fragment length is 200 bps INFO @ Sat, 03 Apr 2021 10:23:05: #2 alternative fragment length(s) may be 200 bps INFO @ Sat, 03 Apr 2021 10:23:05: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX6817536/SRX6817536.05_model.r WARNING @ Sat, 03 Apr 2021 10:23:05: #2 Since the d (200) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 10:23:05: #2 You may need to consider one of the other alternative d(s): 200 WARNING @ Sat, 03 Apr 2021 10:23:05: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 10:23:05: #3 Call peaks... INFO @ Sat, 03 Apr 2021 10:23:05: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 10:23:09: 33000000 INFO @ Sat, 03 Apr 2021 10:23:12: 38000000 INFO @ Sat, 03 Apr 2021 10:23:16: 34000000 INFO @ Sat, 03 Apr 2021 10:23:20: 39000000 INFO @ Sat, 03 Apr 2021 10:23:24: 35000000 INFO @ Sat, 03 Apr 2021 10:23:28: 40000000 INFO @ Sat, 03 Apr 2021 10:23:31: 36000000 INFO @ Sat, 03 Apr 2021 10:23:32: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 10:23:36: 41000000 INFO @ Sat, 03 Apr 2021 10:23:40: 37000000 INFO @ Sat, 03 Apr 2021 10:23:45: 42000000 INFO @ Sat, 03 Apr 2021 10:23:46: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX6817536/SRX6817536.05_peaks.xls INFO @ Sat, 03 Apr 2021 10:23:46: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX6817536/SRX6817536.05_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 10:23:46: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX6817536/SRX6817536.05_summits.bed INFO @ Sat, 03 Apr 2021 10:23:46: Done! pass1 - making usageList (15 chroms): 1 millis pass2 - checking and writing primary data (3682 records, 4 fields): 6 millis CompletedMACS2peakCalling INFO @ Sat, 03 Apr 2021 10:23:48: 38000000 INFO @ Sat, 03 Apr 2021 10:23:53: 43000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sat, 03 Apr 2021 10:23:56: 39000000 INFO @ Sat, 03 Apr 2021 10:24:01: 44000000 INFO @ Sat, 03 Apr 2021 10:24:05: 40000000 INFO @ Sat, 03 Apr 2021 10:24:10: 45000000 INFO @ Sat, 03 Apr 2021 10:24:13: 41000000 INFO @ Sat, 03 Apr 2021 10:24:16: #1 tag size is determined as 150 bps INFO @ Sat, 03 Apr 2021 10:24:16: #1 tag size = 150 INFO @ Sat, 03 Apr 2021 10:24:16: #1 total tags in treatment: 15657802 INFO @ Sat, 03 Apr 2021 10:24:16: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 10:24:16: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 10:24:16: #1 tags after filtering in treatment: 12738222 INFO @ Sat, 03 Apr 2021 10:24:16: #1 Redundant rate of treatment: 0.19 INFO @ Sat, 03 Apr 2021 10:24:16: #1 finished! INFO @ Sat, 03 Apr 2021 10:24:16: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 10:24:16: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 10:24:17: #2 number of paired peaks: 226 WARNING @ Sat, 03 Apr 2021 10:24:17: Fewer paired peaks (226) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 226 pairs to build model! INFO @ Sat, 03 Apr 2021 10:24:17: start model_add_line... INFO @ Sat, 03 Apr 2021 10:24:17: start X-correlation... INFO @ Sat, 03 Apr 2021 10:24:17: end of X-cor INFO @ Sat, 03 Apr 2021 10:24:17: #2 finished! INFO @ Sat, 03 Apr 2021 10:24:17: #2 predicted fragment length is 200 bps INFO @ Sat, 03 Apr 2021 10:24:17: #2 alternative fragment length(s) may be 200 bps INFO @ Sat, 03 Apr 2021 10:24:17: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX6817536/SRX6817536.10_model.r WARNING @ Sat, 03 Apr 2021 10:24:17: #2 Since the d (200) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 10:24:17: #2 You may need to consider one of the other alternative d(s): 200 WARNING @ Sat, 03 Apr 2021 10:24:17: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 10:24:17: #3 Call peaks... INFO @ Sat, 03 Apr 2021 10:24:17: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 10:24:22: 42000000 INFO @ Sat, 03 Apr 2021 10:24:29: 43000000 INFO @ Sat, 03 Apr 2021 10:24:36: 44000000 INFO @ Sat, 03 Apr 2021 10:24:42: 45000000 INFO @ Sat, 03 Apr 2021 10:24:43: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 10:24:48: #1 tag size is determined as 150 bps INFO @ Sat, 03 Apr 2021 10:24:48: #1 tag size = 150 INFO @ Sat, 03 Apr 2021 10:24:48: #1 total tags in treatment: 15657802 INFO @ Sat, 03 Apr 2021 10:24:48: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 10:24:48: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 10:24:48: #1 tags after filtering in treatment: 12738222 INFO @ Sat, 03 Apr 2021 10:24:48: #1 Redundant rate of treatment: 0.19 INFO @ Sat, 03 Apr 2021 10:24:48: #1 finished! INFO @ Sat, 03 Apr 2021 10:24:48: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 10:24:48: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 10:24:49: #2 number of paired peaks: 226 WARNING @ Sat, 03 Apr 2021 10:24:49: Fewer paired peaks (226) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 226 pairs to build model! INFO @ Sat, 03 Apr 2021 10:24:49: start model_add_line... INFO @ Sat, 03 Apr 2021 10:24:49: start X-correlation... INFO @ Sat, 03 Apr 2021 10:24:49: end of X-cor INFO @ Sat, 03 Apr 2021 10:24:49: #2 finished! INFO @ Sat, 03 Apr 2021 10:24:49: #2 predicted fragment length is 200 bps INFO @ Sat, 03 Apr 2021 10:24:49: #2 alternative fragment length(s) may be 200 bps INFO @ Sat, 03 Apr 2021 10:24:49: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX6817536/SRX6817536.20_model.r WARNING @ Sat, 03 Apr 2021 10:24:49: #2 Since the d (200) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 10:24:49: #2 You may need to consider one of the other alternative d(s): 200 WARNING @ Sat, 03 Apr 2021 10:24:49: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 10:24:49: #3 Call peaks... INFO @ Sat, 03 Apr 2021 10:24:49: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 10:24:56: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX6817536/SRX6817536.10_peaks.xls INFO @ Sat, 03 Apr 2021 10:24:56: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX6817536/SRX6817536.10_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 10:24:56: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX6817536/SRX6817536.10_summits.bed INFO @ Sat, 03 Apr 2021 10:24:56: Done! pass1 - making usageList (15 chroms): 1 millis pass2 - checking and writing primary data (1293 records, 4 fields): 5 millis CompletedMACS2peakCalling INFO @ Sat, 03 Apr 2021 10:25:16: #3 Call peaks for each chromosome... BigWig に変換しました。 INFO @ Sat, 03 Apr 2021 10:25:29: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX6817536/SRX6817536.20_peaks.xls INFO @ Sat, 03 Apr 2021 10:25:29: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX6817536/SRX6817536.20_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 10:25:29: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX6817536/SRX6817536.20_summits.bed INFO @ Sat, 03 Apr 2021 10:25:29: Done! pass1 - making usageList (12 chroms): 1 millis pass2 - checking and writing primary data (522 records, 4 fields): 2 millis CompletedMACS2peakCalling