Job ID = 4178495 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2019-12-05T03:30:05 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) spots read : 26,288,635 reads read : 52,577,270 reads written : 52,577,270 2019-12-05T03:43:35 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-12-05T03:43:35 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-12-05T03:51:33 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-12-05T03:51:33 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) spots read : 27,223,555 reads read : 54,447,110 reads written : 54,447,110 spots read : 22,491,124 reads read : 44,982,248 reads written : 44,982,248 fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 02:40:39 76003314 reads; of these: 76003314 (100.00%) were paired; of these: 5043205 (6.64%) aligned concordantly 0 times 49663129 (65.34%) aligned concordantly exactly 1 time 21296980 (28.02%) aligned concordantly >1 times ---- 5043205 pairs aligned concordantly 0 times; of these: 1026572 (20.36%) aligned discordantly 1 time ---- 4016633 pairs aligned 0 times concordantly or discordantly; of these: 8033266 mates make up the pairs; of these: 3660222 (45.56%) aligned 0 times 2275972 (28.33%) aligned exactly 1 time 2097072 (26.10%) aligned >1 times 97.59% overall alignment rate Time searching: 02:40:39 Overall time: 02:40:39 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 60 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 3677780 / 71917707 = 0.0511 in library ' ' BAM に変換しました。 Bed ファイルを作成中... INFO @ Thu, 05 Dec 2019 16:29:44: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX5664976/SRX5664976.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX5664976/SRX5664976.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX5664976/SRX5664976.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX5664976/SRX5664976.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Thu, 05 Dec 2019 16:29:44: #1 read tag files... INFO @ Thu, 05 Dec 2019 16:29:44: #1 read treatment tags... INFO @ Thu, 05 Dec 2019 16:29:49: 1000000 INFO @ Thu, 05 Dec 2019 16:29:55: 2000000 INFO @ Thu, 05 Dec 2019 16:30:00: 3000000 INFO @ Thu, 05 Dec 2019 16:30:06: 4000000 INFO @ Thu, 05 Dec 2019 16:30:11: 5000000 INFO @ Thu, 05 Dec 2019 16:30:13: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX5664976/SRX5664976.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX5664976/SRX5664976.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX5664976/SRX5664976.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX5664976/SRX5664976.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Thu, 05 Dec 2019 16:30:13: #1 read tag files... INFO @ Thu, 05 Dec 2019 16:30:13: #1 read treatment tags... INFO @ Thu, 05 Dec 2019 16:30:17: 6000000 INFO @ Thu, 05 Dec 2019 16:30:19: 1000000 INFO @ Thu, 05 Dec 2019 16:30:23: 7000000 INFO @ Thu, 05 Dec 2019 16:30:26: 2000000 INFO @ Thu, 05 Dec 2019 16:30:28: 8000000 INFO @ Thu, 05 Dec 2019 16:30:32: 3000000 INFO @ Thu, 05 Dec 2019 16:30:34: 9000000 INFO @ Thu, 05 Dec 2019 16:30:38: 4000000 INFO @ Thu, 05 Dec 2019 16:30:40: 10000000 BedGraph に変換中... INFO @ Thu, 05 Dec 2019 16:30:43: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX5664976/SRX5664976.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX5664976/SRX5664976.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX5664976/SRX5664976.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX5664976/SRX5664976.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Thu, 05 Dec 2019 16:30:43: #1 read tag files... INFO @ Thu, 05 Dec 2019 16:30:43: #1 read treatment tags... INFO @ Thu, 05 Dec 2019 16:30:43: 5000000 INFO @ Thu, 05 Dec 2019 16:30:46: 11000000 INFO @ Thu, 05 Dec 2019 16:30:48: 1000000 INFO @ Thu, 05 Dec 2019 16:30:49: 6000000 INFO @ Thu, 05 Dec 2019 16:30:52: 12000000 INFO @ Thu, 05 Dec 2019 16:30:53: 2000000 INFO @ Thu, 05 Dec 2019 16:30:55: 7000000 INFO @ Thu, 05 Dec 2019 16:30:58: 13000000 INFO @ Thu, 05 Dec 2019 16:30:58: 3000000 INFO @ Thu, 05 Dec 2019 16:31:02: 8000000 INFO @ Thu, 05 Dec 2019 16:31:03: 4000000 INFO @ Thu, 05 Dec 2019 16:31:04: 14000000 INFO @ Thu, 05 Dec 2019 16:31:08: 9000000 INFO @ Thu, 05 Dec 2019 16:31:08: 5000000 INFO @ Thu, 05 Dec 2019 16:31:09: 15000000 INFO @ Thu, 05 Dec 2019 16:31:14: 6000000 INFO @ Thu, 05 Dec 2019 16:31:14: 10000000 INFO @ Thu, 05 Dec 2019 16:31:15: 16000000 INFO @ Thu, 05 Dec 2019 16:31:18: 7000000 INFO @ Thu, 05 Dec 2019 16:31:20: 11000000 INFO @ Thu, 05 Dec 2019 16:31:21: 17000000 INFO @ Thu, 05 Dec 2019 16:31:23: 8000000 INFO @ Thu, 05 Dec 2019 16:31:26: 12000000 INFO @ Thu, 05 Dec 2019 16:31:27: 18000000 INFO @ Thu, 05 Dec 2019 16:31:28: 9000000 INFO @ Thu, 05 Dec 2019 16:31:32: 13000000 INFO @ Thu, 05 Dec 2019 16:31:32: 19000000 INFO @ Thu, 05 Dec 2019 16:31:33: 10000000 INFO @ Thu, 05 Dec 2019 16:31:38: 11000000 INFO @ Thu, 05 Dec 2019 16:31:38: 14000000 INFO @ Thu, 05 Dec 2019 16:31:38: 20000000 INFO @ Thu, 05 Dec 2019 16:31:43: 12000000 INFO @ Thu, 05 Dec 2019 16:31:44: 15000000 INFO @ Thu, 05 Dec 2019 16:31:44: 21000000 INFO @ Thu, 05 Dec 2019 16:31:48: 13000000 INFO @ Thu, 05 Dec 2019 16:31:50: 16000000 INFO @ Thu, 05 Dec 2019 16:31:50: 22000000 INFO @ Thu, 05 Dec 2019 16:31:53: 14000000 INFO @ Thu, 05 Dec 2019 16:31:56: 17000000 INFO @ Thu, 05 Dec 2019 16:31:56: 23000000 INFO @ Thu, 05 Dec 2019 16:31:58: 15000000 INFO @ Thu, 05 Dec 2019 16:32:02: 18000000 INFO @ Thu, 05 Dec 2019 16:32:02: 24000000 INFO @ Thu, 05 Dec 2019 16:32:03: 16000000 INFO @ Thu, 05 Dec 2019 16:32:08: 19000000 INFO @ Thu, 05 Dec 2019 16:32:08: 25000000 INFO @ Thu, 05 Dec 2019 16:32:08: 17000000 INFO @ Thu, 05 Dec 2019 16:32:13: 18000000 INFO @ Thu, 05 Dec 2019 16:32:13: 20000000 INFO @ Thu, 05 Dec 2019 16:32:14: 26000000 INFO @ Thu, 05 Dec 2019 16:32:18: 19000000 INFO @ Thu, 05 Dec 2019 16:32:20: 21000000 INFO @ Thu, 05 Dec 2019 16:32:20: 27000000 INFO @ Thu, 05 Dec 2019 16:32:23: 20000000 INFO @ Thu, 05 Dec 2019 16:32:26: 22000000 INFO @ Thu, 05 Dec 2019 16:32:26: 28000000 INFO @ Thu, 05 Dec 2019 16:32:28: 21000000 INFO @ Thu, 05 Dec 2019 16:32:32: 23000000 INFO @ Thu, 05 Dec 2019 16:32:33: 29000000 INFO @ Thu, 05 Dec 2019 16:32:33: 22000000 INFO @ Thu, 05 Dec 2019 16:32:37: 23000000 INFO @ Thu, 05 Dec 2019 16:32:38: 24000000 INFO @ Thu, 05 Dec 2019 16:32:38: 30000000 INFO @ Thu, 05 Dec 2019 16:32:42: 24000000 INFO @ Thu, 05 Dec 2019 16:32:44: 31000000 INFO @ Thu, 05 Dec 2019 16:32:44: 25000000 INFO @ Thu, 05 Dec 2019 16:32:47: 25000000 INFO @ Thu, 05 Dec 2019 16:32:50: 32000000 INFO @ Thu, 05 Dec 2019 16:32:50: 26000000 INFO @ Thu, 05 Dec 2019 16:32:52: 26000000 INFO @ Thu, 05 Dec 2019 16:32:55: 33000000 INFO @ Thu, 05 Dec 2019 16:32:57: 27000000 INFO @ Thu, 05 Dec 2019 16:32:57: 27000000 INFO @ Thu, 05 Dec 2019 16:33:01: 34000000 INFO @ Thu, 05 Dec 2019 16:33:02: 28000000 INFO @ Thu, 05 Dec 2019 16:33:03: 28000000 INFO @ Thu, 05 Dec 2019 16:33:07: 29000000 INFO @ Thu, 05 Dec 2019 16:33:07: 35000000 INFO @ Thu, 05 Dec 2019 16:33:09: 29000000 INFO @ Thu, 05 Dec 2019 16:33:11: 30000000 INFO @ Thu, 05 Dec 2019 16:33:13: 36000000 INFO @ Thu, 05 Dec 2019 16:33:14: 30000000 INFO @ Thu, 05 Dec 2019 16:33:16: 31000000 INFO @ Thu, 05 Dec 2019 16:33:18: 37000000 INFO @ Thu, 05 Dec 2019 16:33:20: 31000000 INFO @ Thu, 05 Dec 2019 16:33:21: 32000000 INFO @ Thu, 05 Dec 2019 16:33:24: 38000000 INFO @ Thu, 05 Dec 2019 16:33:26: 32000000 INFO @ Thu, 05 Dec 2019 16:33:26: 33000000 INFO @ Thu, 05 Dec 2019 16:33:30: 39000000 INFO @ Thu, 05 Dec 2019 16:33:31: 34000000 INFO @ Thu, 05 Dec 2019 16:33:32: 33000000 INFO @ Thu, 05 Dec 2019 16:33:36: 40000000 INFO @ Thu, 05 Dec 2019 16:33:36: 35000000 INFO @ Thu, 05 Dec 2019 16:33:38: 34000000 INFO @ Thu, 05 Dec 2019 16:33:41: 36000000 INFO @ Thu, 05 Dec 2019 16:33:41: 41000000 INFO @ Thu, 05 Dec 2019 16:33:43: 35000000 INFO @ Thu, 05 Dec 2019 16:33:46: 37000000 INFO @ Thu, 05 Dec 2019 16:33:47: 42000000 INFO @ Thu, 05 Dec 2019 16:33:49: 36000000 INFO @ Thu, 05 Dec 2019 16:33:51: 38000000 INFO @ Thu, 05 Dec 2019 16:33:53: 43000000 INFO @ Thu, 05 Dec 2019 16:33:55: 37000000 INFO @ Thu, 05 Dec 2019 16:33:56: 39000000 INFO @ Thu, 05 Dec 2019 16:33:58: 44000000 INFO @ Thu, 05 Dec 2019 16:34:01: 38000000 INFO @ Thu, 05 Dec 2019 16:34:01: 40000000 INFO @ Thu, 05 Dec 2019 16:34:04: 45000000 INFO @ Thu, 05 Dec 2019 16:34:06: 41000000 INFO @ Thu, 05 Dec 2019 16:34:07: 39000000 INFO @ Thu, 05 Dec 2019 16:34:10: 46000000 INFO @ Thu, 05 Dec 2019 16:34:11: 42000000 INFO @ Thu, 05 Dec 2019 16:34:13: 40000000 INFO @ Thu, 05 Dec 2019 16:34:16: 47000000 INFO @ Thu, 05 Dec 2019 16:34:16: 43000000 INFO @ Thu, 05 Dec 2019 16:34:18: 41000000 INFO @ Thu, 05 Dec 2019 16:34:21: 44000000 INFO @ Thu, 05 Dec 2019 16:34:21: 48000000 INFO @ Thu, 05 Dec 2019 16:34:24: 42000000 INFO @ Thu, 05 Dec 2019 16:34:26: 45000000 INFO @ Thu, 05 Dec 2019 16:34:27: 49000000 INFO @ Thu, 05 Dec 2019 16:34:30: 43000000 INFO @ Thu, 05 Dec 2019 16:34:31: 46000000 INFO @ Thu, 05 Dec 2019 16:34:33: 50000000 INFO @ Thu, 05 Dec 2019 16:34:36: 44000000 INFO @ Thu, 05 Dec 2019 16:34:36: 47000000 INFO @ Thu, 05 Dec 2019 16:34:38: 51000000 INFO @ Thu, 05 Dec 2019 16:34:41: 48000000 INFO @ Thu, 05 Dec 2019 16:34:41: 45000000 INFO @ Thu, 05 Dec 2019 16:34:44: 52000000 INFO @ Thu, 05 Dec 2019 16:34:46: 49000000 INFO @ Thu, 05 Dec 2019 16:34:48: 46000000 INFO @ Thu, 05 Dec 2019 16:34:50: 53000000 INFO @ Thu, 05 Dec 2019 16:34:51: 50000000 INFO @ Thu, 05 Dec 2019 16:34:54: 47000000 INFO @ Thu, 05 Dec 2019 16:34:55: 51000000 INFO @ Thu, 05 Dec 2019 16:34:56: 54000000 INFO @ Thu, 05 Dec 2019 16:35:00: 52000000 INFO @ Thu, 05 Dec 2019 16:35:01: 48000000 INFO @ Thu, 05 Dec 2019 16:35:01: 55000000 INFO @ Thu, 05 Dec 2019 16:35:05: 53000000 INFO @ Thu, 05 Dec 2019 16:35:06: 49000000 INFO @ Thu, 05 Dec 2019 16:35:07: 56000000 INFO @ Thu, 05 Dec 2019 16:35:10: 54000000 INFO @ Thu, 05 Dec 2019 16:35:12: 50000000 INFO @ Thu, 05 Dec 2019 16:35:13: 57000000 INFO @ Thu, 05 Dec 2019 16:35:15: 55000000 INFO @ Thu, 05 Dec 2019 16:35:18: 51000000 INFO @ Thu, 05 Dec 2019 16:35:18: 58000000 INFO @ Thu, 05 Dec 2019 16:35:20: 56000000 INFO @ Thu, 05 Dec 2019 16:35:24: 52000000 INFO @ Thu, 05 Dec 2019 16:35:24: 59000000 INFO @ Thu, 05 Dec 2019 16:35:24: 57000000 INFO @ Thu, 05 Dec 2019 16:35:29: 58000000 INFO @ Thu, 05 Dec 2019 16:35:29: 60000000 INFO @ Thu, 05 Dec 2019 16:35:29: 53000000 INFO @ Thu, 05 Dec 2019 16:35:34: 59000000 INFO @ Thu, 05 Dec 2019 16:35:35: 61000000 INFO @ Thu, 05 Dec 2019 16:35:35: 54000000 INFO @ Thu, 05 Dec 2019 16:35:38: 60000000 INFO @ Thu, 05 Dec 2019 16:35:40: 62000000 INFO @ Thu, 05 Dec 2019 16:35:41: 55000000 INFO @ Thu, 05 Dec 2019 16:35:43: 61000000 INFO @ Thu, 05 Dec 2019 16:35:46: 63000000 INFO @ Thu, 05 Dec 2019 16:35:47: 56000000 INFO @ Thu, 05 Dec 2019 16:35:48: 62000000 INFO @ Thu, 05 Dec 2019 16:35:52: 64000000 INFO @ Thu, 05 Dec 2019 16:35:52: 63000000 INFO @ Thu, 05 Dec 2019 16:35:52: 57000000 INFO @ Thu, 05 Dec 2019 16:35:57: 64000000 INFO @ Thu, 05 Dec 2019 16:35:57: 65000000 INFO @ Thu, 05 Dec 2019 16:35:58: 58000000 INFO @ Thu, 05 Dec 2019 16:36:02: 65000000 INFO @ Thu, 05 Dec 2019 16:36:03: 66000000 INFO @ Thu, 05 Dec 2019 16:36:04: 59000000 INFO @ Thu, 05 Dec 2019 16:36:07: 66000000 INFO @ Thu, 05 Dec 2019 16:36:09: 67000000 INFO @ Thu, 05 Dec 2019 16:36:10: 60000000 INFO @ Thu, 05 Dec 2019 16:36:12: 67000000 INFO @ Thu, 05 Dec 2019 16:36:15: 68000000 INFO @ Thu, 05 Dec 2019 16:36:16: 61000000 INFO @ Thu, 05 Dec 2019 16:36:17: 68000000 INFO @ Thu, 05 Dec 2019 16:36:21: 69000000 INFO @ Thu, 05 Dec 2019 16:36:21: 69000000 INFO @ Thu, 05 Dec 2019 16:36:22: 62000000 INFO @ Thu, 05 Dec 2019 16:36:26: 70000000 INFO @ Thu, 05 Dec 2019 16:36:27: 70000000 INFO @ Thu, 05 Dec 2019 16:36:28: 63000000 INFO @ Thu, 05 Dec 2019 16:36:31: 71000000 INFO @ Thu, 05 Dec 2019 16:36:32: 71000000 INFO @ Thu, 05 Dec 2019 16:36:33: 64000000 INFO @ Thu, 05 Dec 2019 16:36:36: 72000000 INFO @ Thu, 05 Dec 2019 16:36:38: 72000000 INFO @ Thu, 05 Dec 2019 16:36:39: 65000000 INFO @ Thu, 05 Dec 2019 16:36:41: 73000000 INFO @ Thu, 05 Dec 2019 16:36:44: 73000000 INFO @ Thu, 05 Dec 2019 16:36:45: 66000000 INFO @ Thu, 05 Dec 2019 16:36:45: 74000000 INFO @ Thu, 05 Dec 2019 16:36:49: 74000000 INFO @ Thu, 05 Dec 2019 16:36:50: 75000000 INFO @ Thu, 05 Dec 2019 16:36:51: 67000000 INFO @ Thu, 05 Dec 2019 16:36:55: 75000000 INFO @ Thu, 05 Dec 2019 16:36:55: 76000000 INFO @ Thu, 05 Dec 2019 16:36:56: 68000000 INFO @ Thu, 05 Dec 2019 16:36:59: 77000000 INFO @ Thu, 05 Dec 2019 16:37:00: 76000000 INFO @ Thu, 05 Dec 2019 16:37:02: 69000000 INFO @ Thu, 05 Dec 2019 16:37:04: 78000000 INFO @ Thu, 05 Dec 2019 16:37:06: 77000000 INFO @ Thu, 05 Dec 2019 16:37:09: 70000000 INFO @ Thu, 05 Dec 2019 16:37:09: 79000000 INFO @ Thu, 05 Dec 2019 16:37:11: 78000000 INFO @ Thu, 05 Dec 2019 16:37:13: 80000000 INFO @ Thu, 05 Dec 2019 16:37:14: 71000000 INFO @ Thu, 05 Dec 2019 16:37:17: 79000000 INFO @ Thu, 05 Dec 2019 16:37:18: 81000000 INFO @ Thu, 05 Dec 2019 16:37:20: 72000000 INFO @ Thu, 05 Dec 2019 16:37:23: 80000000 INFO @ Thu, 05 Dec 2019 16:37:23: 82000000 INFO @ Thu, 05 Dec 2019 16:37:26: 73000000 INFO @ Thu, 05 Dec 2019 16:37:27: 83000000 INFO @ Thu, 05 Dec 2019 16:37:28: 81000000 INFO @ Thu, 05 Dec 2019 16:37:32: 74000000 INFO @ Thu, 05 Dec 2019 16:37:32: 84000000 INFO @ Thu, 05 Dec 2019 16:37:34: 82000000 INFO @ Thu, 05 Dec 2019 16:37:37: 85000000 INFO @ Thu, 05 Dec 2019 16:37:37: 75000000 INFO @ Thu, 05 Dec 2019 16:37:40: 83000000 INFO @ Thu, 05 Dec 2019 16:37:42: 86000000 INFO @ Thu, 05 Dec 2019 16:37:43: 76000000 INFO @ Thu, 05 Dec 2019 16:37:46: 84000000 INFO @ Thu, 05 Dec 2019 16:37:47: 87000000 INFO @ Thu, 05 Dec 2019 16:37:48: 77000000 INFO @ Thu, 05 Dec 2019 16:37:51: 85000000 INFO @ Thu, 05 Dec 2019 16:37:51: 88000000 INFO @ Thu, 05 Dec 2019 16:37:54: 78000000 INFO @ Thu, 05 Dec 2019 16:37:56: 89000000 INFO @ Thu, 05 Dec 2019 16:37:57: 86000000 INFO @ Thu, 05 Dec 2019 16:37:59: 79000000 INFO @ Thu, 05 Dec 2019 16:38:01: 90000000 INFO @ Thu, 05 Dec 2019 16:38:03: 87000000 INFO @ Thu, 05 Dec 2019 16:38:05: 80000000 INFO @ Thu, 05 Dec 2019 16:38:06: 91000000 INFO @ Thu, 05 Dec 2019 16:38:08: 88000000 INFO @ Thu, 05 Dec 2019 16:38:10: 92000000 INFO @ Thu, 05 Dec 2019 16:38:11: 81000000 INFO @ Thu, 05 Dec 2019 16:38:14: 89000000 INFO @ Thu, 05 Dec 2019 16:38:15: 93000000 INFO @ Thu, 05 Dec 2019 16:38:16: 82000000 INFO @ Thu, 05 Dec 2019 16:38:20: 90000000 INFO @ Thu, 05 Dec 2019 16:38:20: 94000000 INFO @ Thu, 05 Dec 2019 16:38:22: 83000000 INFO @ Thu, 05 Dec 2019 16:38:24: 95000000 INFO @ Thu, 05 Dec 2019 16:38:25: 91000000 INFO @ Thu, 05 Dec 2019 16:38:27: 84000000 INFO @ Thu, 05 Dec 2019 16:38:29: 96000000 INFO @ Thu, 05 Dec 2019 16:38:31: 92000000 INFO @ Thu, 05 Dec 2019 16:38:33: 85000000 INFO @ Thu, 05 Dec 2019 16:38:34: 97000000 INFO @ Thu, 05 Dec 2019 16:38:36: 93000000 INFO @ Thu, 05 Dec 2019 16:38:39: 86000000 INFO @ Thu, 05 Dec 2019 16:38:39: 98000000 INFO @ Thu, 05 Dec 2019 16:38:42: 94000000 INFO @ Thu, 05 Dec 2019 16:38:44: 99000000 INFO @ Thu, 05 Dec 2019 16:38:44: 87000000 INFO @ Thu, 05 Dec 2019 16:38:48: 95000000 INFO @ Thu, 05 Dec 2019 16:38:48: 100000000 INFO @ Thu, 05 Dec 2019 16:38:50: 88000000 INFO @ Thu, 05 Dec 2019 16:38:53: 101000000 INFO @ Thu, 05 Dec 2019 16:38:53: 96000000 INFO @ Thu, 05 Dec 2019 16:38:56: 89000000 INFO @ Thu, 05 Dec 2019 16:38:58: 102000000 INFO @ Thu, 05 Dec 2019 16:38:59: 97000000 INFO @ Thu, 05 Dec 2019 16:39:01: 90000000 INFO @ Thu, 05 Dec 2019 16:39:03: 103000000 INFO @ Thu, 05 Dec 2019 16:39:05: 98000000 INFO @ Thu, 05 Dec 2019 16:39:07: 91000000 INFO @ Thu, 05 Dec 2019 16:39:08: 104000000 INFO @ Thu, 05 Dec 2019 16:39:11: 99000000 INFO @ Thu, 05 Dec 2019 16:39:12: 105000000 INFO @ Thu, 05 Dec 2019 16:39:13: 92000000 INFO @ Thu, 05 Dec 2019 16:39:16: 100000000 INFO @ Thu, 05 Dec 2019 16:39:17: 106000000 INFO @ Thu, 05 Dec 2019 16:39:18: 93000000 INFO @ Thu, 05 Dec 2019 16:39:22: 107000000 INFO @ Thu, 05 Dec 2019 16:39:22: 101000000 INFO @ Thu, 05 Dec 2019 16:39:24: 94000000 INFO @ Thu, 05 Dec 2019 16:39:26: 108000000 INFO @ Thu, 05 Dec 2019 16:39:28: 102000000 INFO @ Thu, 05 Dec 2019 16:39:30: 95000000 INFO @ Thu, 05 Dec 2019 16:39:31: 109000000 INFO @ Thu, 05 Dec 2019 16:39:34: 103000000 INFO @ Thu, 05 Dec 2019 16:39:35: 96000000 INFO @ Thu, 05 Dec 2019 16:39:35: 110000000 INFO @ Thu, 05 Dec 2019 16:39:39: 104000000 INFO @ Thu, 05 Dec 2019 16:39:40: 111000000 INFO @ Thu, 05 Dec 2019 16:39:41: 97000000 INFO @ Thu, 05 Dec 2019 16:39:44: 105000000 INFO @ Thu, 05 Dec 2019 16:39:45: 112000000 INFO @ Thu, 05 Dec 2019 16:39:46: 98000000 INFO @ Thu, 05 Dec 2019 16:39:50: 113000000 INFO @ Thu, 05 Dec 2019 16:39:50: 106000000 INFO @ Thu, 05 Dec 2019 16:39:52: 99000000 INFO @ Thu, 05 Dec 2019 16:39:54: 114000000 INFO @ Thu, 05 Dec 2019 16:39:56: 107000000 INFO @ Thu, 05 Dec 2019 16:39:58: 100000000 INFO @ Thu, 05 Dec 2019 16:39:59: 115000000 INFO @ Thu, 05 Dec 2019 16:40:01: 108000000 INFO @ Thu, 05 Dec 2019 16:40:03: 101000000 INFO @ Thu, 05 Dec 2019 16:40:04: 116000000 INFO @ Thu, 05 Dec 2019 16:40:07: 109000000 INFO @ Thu, 05 Dec 2019 16:40:08: 117000000 INFO @ Thu, 05 Dec 2019 16:40:09: 102000000 INFO @ Thu, 05 Dec 2019 16:40:12: 110000000 INFO @ Thu, 05 Dec 2019 16:40:13: 118000000 INFO @ Thu, 05 Dec 2019 16:40:14: 103000000 INFO @ Thu, 05 Dec 2019 16:40:18: 111000000 INFO @ Thu, 05 Dec 2019 16:40:18: 119000000 INFO @ Thu, 05 Dec 2019 16:40:20: 104000000 INFO @ Thu, 05 Dec 2019 16:40:23: 120000000 INFO @ Thu, 05 Dec 2019 16:40:24: 112000000 INFO @ Thu, 05 Dec 2019 16:40:25: 105000000 INFO @ Thu, 05 Dec 2019 16:40:27: 121000000 INFO @ Thu, 05 Dec 2019 16:40:29: 113000000 INFO @ Thu, 05 Dec 2019 16:40:31: 106000000 INFO @ Thu, 05 Dec 2019 16:40:32: 122000000 INFO @ Thu, 05 Dec 2019 16:40:35: 114000000 INFO @ Thu, 05 Dec 2019 16:40:36: 107000000 INFO @ Thu, 05 Dec 2019 16:40:37: 123000000 INFO @ Thu, 05 Dec 2019 16:40:40: 115000000 INFO @ Thu, 05 Dec 2019 16:40:42: 124000000 INFO @ Thu, 05 Dec 2019 16:40:42: 108000000 INFO @ Thu, 05 Dec 2019 16:40:46: 116000000 INFO @ Thu, 05 Dec 2019 16:40:46: 125000000 INFO @ Thu, 05 Dec 2019 16:40:48: 109000000 INFO @ Thu, 05 Dec 2019 16:40:51: 126000000 INFO @ Thu, 05 Dec 2019 16:40:52: 117000000 INFO @ Thu, 05 Dec 2019 16:40:53: 110000000 INFO @ Thu, 05 Dec 2019 16:40:56: 127000000 INFO @ Thu, 05 Dec 2019 16:40:57: 118000000 INFO @ Thu, 05 Dec 2019 16:40:59: 111000000 INFO @ Thu, 05 Dec 2019 16:41:00: 128000000 INFO @ Thu, 05 Dec 2019 16:41:03: 119000000 INFO @ Thu, 05 Dec 2019 16:41:04: 112000000 INFO @ Thu, 05 Dec 2019 16:41:05: 129000000 INFO @ Thu, 05 Dec 2019 16:41:09: 120000000 INFO @ Thu, 05 Dec 2019 16:41:09: 130000000 INFO @ Thu, 05 Dec 2019 16:41:10: 113000000 INFO @ Thu, 05 Dec 2019 16:41:14: 131000000 INFO @ Thu, 05 Dec 2019 16:41:14: 121000000 INFO @ Thu, 05 Dec 2019 16:41:15: 114000000 INFO @ Thu, 05 Dec 2019 16:41:18: 132000000 INFO @ Thu, 05 Dec 2019 16:41:20: 122000000 INFO @ Thu, 05 Dec 2019 16:41:21: 115000000 INFO @ Thu, 05 Dec 2019 16:41:23: 133000000 INFO @ Thu, 05 Dec 2019 16:41:26: 123000000 INFO @ Thu, 05 Dec 2019 16:41:27: 116000000 INFO @ Thu, 05 Dec 2019 16:41:28: 134000000 INFO @ Thu, 05 Dec 2019 16:41:32: 124000000 INFO @ Thu, 05 Dec 2019 16:41:32: 135000000 INFO @ Thu, 05 Dec 2019 16:41:33: 117000000 INFO @ Thu, 05 Dec 2019 16:41:37: 136000000 INFO @ Thu, 05 Dec 2019 16:41:38: 125000000 INFO @ Thu, 05 Dec 2019 16:41:39: 118000000 INFO @ Thu, 05 Dec 2019 16:41:41: 137000000 INFO @ Thu, 05 Dec 2019 16:41:43: 126000000 INFO @ Thu, 05 Dec 2019 16:41:45: 119000000 INFO @ Thu, 05 Dec 2019 16:41:46: 138000000 INFO @ Thu, 05 Dec 2019 16:41:49: 127000000 INFO @ Thu, 05 Dec 2019 16:41:50: 120000000 INFO @ Thu, 05 Dec 2019 16:41:51: 139000000 INFO @ Thu, 05 Dec 2019 16:41:55: 128000000 INFO @ Thu, 05 Dec 2019 16:41:56: 140000000 INFO @ Thu, 05 Dec 2019 16:41:56: 121000000 INFO @ Thu, 05 Dec 2019 16:42:00: 129000000 INFO @ Thu, 05 Dec 2019 16:42:01: #1 tag size is determined as 42 bps INFO @ Thu, 05 Dec 2019 16:42:01: #1 tag size = 42 INFO @ Thu, 05 Dec 2019 16:42:01: #1 total tags in treatment: 67297291 INFO @ Thu, 05 Dec 2019 16:42:01: #1 user defined the maximum tags... INFO @ Thu, 05 Dec 2019 16:42:01: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Thu, 05 Dec 2019 16:42:02: 122000000 INFO @ Thu, 05 Dec 2019 16:42:02: #1 tags after filtering in treatment: 53799835 INFO @ Thu, 05 Dec 2019 16:42:02: #1 Redundant rate of treatment: 0.20 INFO @ Thu, 05 Dec 2019 16:42:02: #1 finished! INFO @ Thu, 05 Dec 2019 16:42:02: #2 Build Peak Model... INFO @ Thu, 05 Dec 2019 16:42:02: #2 looking for paired plus/minus strand peaks... INFO @ Thu, 05 Dec 2019 16:42:06: #2 number of paired peaks: 0 WARNING @ Thu, 05 Dec 2019 16:42:06: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Thu, 05 Dec 2019 16:42:06: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/dm3/SRX5664976/SRX5664976.20_peaks.narrowPeak: No such file or directory INFO @ Thu, 05 Dec 2019 16:42:06: 130000000 pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX5664976/SRX5664976.20_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX5664976/SRX5664976.20_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX5664976/SRX5664976.20_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Thu, 05 Dec 2019 16:42:07: 123000000 INFO @ Thu, 05 Dec 2019 16:42:11: 131000000 INFO @ Thu, 05 Dec 2019 16:42:12: 124000000 INFO @ Thu, 05 Dec 2019 16:42:17: 132000000 INFO @ Thu, 05 Dec 2019 16:42:18: 125000000 INFO @ Thu, 05 Dec 2019 16:42:22: 133000000 INFO @ Thu, 05 Dec 2019 16:42:23: 126000000 INFO @ Thu, 05 Dec 2019 16:42:28: 134000000 INFO @ Thu, 05 Dec 2019 16:42:29: 127000000 INFO @ Thu, 05 Dec 2019 16:42:33: 135000000 INFO @ Thu, 05 Dec 2019 16:42:34: 128000000 INFO @ Thu, 05 Dec 2019 16:42:39: 136000000 INFO @ Thu, 05 Dec 2019 16:42:40: 129000000 INFO @ Thu, 05 Dec 2019 16:42:44: 137000000 INFO @ Thu, 05 Dec 2019 16:42:45: 130000000 INFO @ Thu, 05 Dec 2019 16:42:50: 138000000 INFO @ Thu, 05 Dec 2019 16:42:51: 131000000 INFO @ Thu, 05 Dec 2019 16:42:55: 139000000 INFO @ Thu, 05 Dec 2019 16:42:56: 132000000 INFO @ Thu, 05 Dec 2019 16:43:01: 140000000 INFO @ Thu, 05 Dec 2019 16:43:02: 133000000 INFO @ Thu, 05 Dec 2019 16:43:07: #1 tag size is determined as 42 bps INFO @ Thu, 05 Dec 2019 16:43:07: #1 tag size = 42 INFO @ Thu, 05 Dec 2019 16:43:07: #1 total tags in treatment: 67297291 INFO @ Thu, 05 Dec 2019 16:43:07: #1 user defined the maximum tags... INFO @ Thu, 05 Dec 2019 16:43:07: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Thu, 05 Dec 2019 16:43:07: 134000000 INFO @ Thu, 05 Dec 2019 16:43:08: #1 tags after filtering in treatment: 53799835 INFO @ Thu, 05 Dec 2019 16:43:08: #1 Redundant rate of treatment: 0.20 INFO @ Thu, 05 Dec 2019 16:43:08: #1 finished! INFO @ Thu, 05 Dec 2019 16:43:08: #2 Build Peak Model... INFO @ Thu, 05 Dec 2019 16:43:08: #2 looking for paired plus/minus strand peaks... INFO @ Thu, 05 Dec 2019 16:43:12: #2 number of paired peaks: 0 WARNING @ Thu, 05 Dec 2019 16:43:12: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Thu, 05 Dec 2019 16:43:12: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/dm3/SRX5664976/SRX5664976.05_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX5664976/SRX5664976.05_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX5664976/SRX5664976.05_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX5664976/SRX5664976.05_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Thu, 05 Dec 2019 16:43:12: 135000000 INFO @ Thu, 05 Dec 2019 16:43:17: 136000000 INFO @ Thu, 05 Dec 2019 16:43:23: 137000000 INFO @ Thu, 05 Dec 2019 16:43:28: 138000000 INFO @ Thu, 05 Dec 2019 16:43:33: 139000000 INFO @ Thu, 05 Dec 2019 16:43:38: 140000000 INFO @ Thu, 05 Dec 2019 16:43:44: #1 tag size is determined as 42 bps INFO @ Thu, 05 Dec 2019 16:43:44: #1 tag size = 42 INFO @ Thu, 05 Dec 2019 16:43:44: #1 total tags in treatment: 67297291 INFO @ Thu, 05 Dec 2019 16:43:44: #1 user defined the maximum tags... INFO @ Thu, 05 Dec 2019 16:43:44: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Thu, 05 Dec 2019 16:43:46: #1 tags after filtering in treatment: 53799835 INFO @ Thu, 05 Dec 2019 16:43:46: #1 Redundant rate of treatment: 0.20 INFO @ Thu, 05 Dec 2019 16:43:46: #1 finished! INFO @ Thu, 05 Dec 2019 16:43:46: #2 Build Peak Model... INFO @ Thu, 05 Dec 2019 16:43:46: #2 looking for paired plus/minus strand peaks... INFO @ Thu, 05 Dec 2019 16:43:49: #2 number of paired peaks: 0 WARNING @ Thu, 05 Dec 2019 16:43:49: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Thu, 05 Dec 2019 16:43:49: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/dm3/SRX5664976/SRX5664976.10_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX5664976/SRX5664976.10_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX5664976/SRX5664976.10_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX5664976/SRX5664976.10_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。