Job ID = 2590945 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2019-08-12T15:57:37 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-08-12T15:57:37 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-08-12T15:57:50 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-08-12T15:58:34 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) spots read : 80,064,243 reads read : 160,128,486 reads written : 160,128,486 rm: cannot remove ‘[DSE]RR*’: No such file or directory fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 03:11:50 80064243 reads; of these: 80064243 (100.00%) were paired; of these: 22175584 (27.70%) aligned concordantly 0 times 37031870 (46.25%) aligned concordantly exactly 1 time 20856789 (26.05%) aligned concordantly >1 times ---- 22175584 pairs aligned concordantly 0 times; of these: 403312 (1.82%) aligned discordantly 1 time ---- 21772272 pairs aligned 0 times concordantly or discordantly; of these: 43544544 mates make up the pairs; of these: 40925139 (93.98%) aligned 0 times 1405654 (3.23%) aligned exactly 1 time 1213751 (2.79%) aligned >1 times 74.44% overall alignment rate Time searching: 03:11:50 Overall time: 03:11:50 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 52 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 12769102 / 58016318 = 0.2201 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Tue, 13 Aug 2019 04:46:18: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX5431056/SRX5431056.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX5431056/SRX5431056.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX5431056/SRX5431056.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX5431056/SRX5431056.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 13 Aug 2019 04:46:18: #1 read tag files... INFO @ Tue, 13 Aug 2019 04:46:18: #1 read treatment tags... INFO @ Tue, 13 Aug 2019 04:46:19: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX5431056/SRX5431056.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX5431056/SRX5431056.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX5431056/SRX5431056.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX5431056/SRX5431056.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 13 Aug 2019 04:46:19: #1 read tag files... INFO @ Tue, 13 Aug 2019 04:46:19: #1 read treatment tags... INFO @ Tue, 13 Aug 2019 04:46:20: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX5431056/SRX5431056.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX5431056/SRX5431056.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX5431056/SRX5431056.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX5431056/SRX5431056.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 13 Aug 2019 04:46:20: #1 read tag files... INFO @ Tue, 13 Aug 2019 04:46:20: #1 read treatment tags... INFO @ Tue, 13 Aug 2019 04:46:27: 1000000 INFO @ Tue, 13 Aug 2019 04:46:31: 1000000 INFO @ Tue, 13 Aug 2019 04:46:32: 1000000 INFO @ Tue, 13 Aug 2019 04:46:36: 2000000 INFO @ Tue, 13 Aug 2019 04:46:43: 2000000 INFO @ Tue, 13 Aug 2019 04:46:44: 2000000 INFO @ Tue, 13 Aug 2019 04:46:46: 3000000 INFO @ Tue, 13 Aug 2019 04:46:55: 3000000 INFO @ Tue, 13 Aug 2019 04:46:56: 4000000 INFO @ Tue, 13 Aug 2019 04:46:56: 3000000 INFO @ Tue, 13 Aug 2019 04:47:05: 5000000 INFO @ Tue, 13 Aug 2019 04:47:08: 4000000 INFO @ Tue, 13 Aug 2019 04:47:09: 4000000 INFO @ Tue, 13 Aug 2019 04:47:15: 6000000 INFO @ Tue, 13 Aug 2019 04:47:20: 5000000 INFO @ Tue, 13 Aug 2019 04:47:21: 5000000 INFO @ Tue, 13 Aug 2019 04:47:25: 7000000 INFO @ Tue, 13 Aug 2019 04:47:32: 6000000 INFO @ Tue, 13 Aug 2019 04:47:33: 6000000 INFO @ Tue, 13 Aug 2019 04:47:34: 8000000 INFO @ Tue, 13 Aug 2019 04:47:44: 7000000 INFO @ Tue, 13 Aug 2019 04:47:44: 9000000 INFO @ Tue, 13 Aug 2019 04:47:45: 7000000 INFO @ Tue, 13 Aug 2019 04:47:54: 10000000 INFO @ Tue, 13 Aug 2019 04:47:55: 8000000 INFO @ Tue, 13 Aug 2019 04:47:56: 8000000 INFO @ Tue, 13 Aug 2019 04:48:04: 11000000 INFO @ Tue, 13 Aug 2019 04:48:07: 9000000 INFO @ Tue, 13 Aug 2019 04:48:08: 9000000 INFO @ Tue, 13 Aug 2019 04:48:15: 12000000 INFO @ Tue, 13 Aug 2019 04:48:20: 10000000 INFO @ Tue, 13 Aug 2019 04:48:21: 10000000 INFO @ Tue, 13 Aug 2019 04:48:26: 13000000 INFO @ Tue, 13 Aug 2019 04:48:35: 11000000 INFO @ Tue, 13 Aug 2019 04:48:36: 11000000 INFO @ Tue, 13 Aug 2019 04:48:37: 14000000 INFO @ Tue, 13 Aug 2019 04:48:48: 15000000 INFO @ Tue, 13 Aug 2019 04:48:49: 12000000 INFO @ Tue, 13 Aug 2019 04:48:50: 12000000 INFO @ Tue, 13 Aug 2019 04:48:59: 16000000 INFO @ Tue, 13 Aug 2019 04:49:02: 13000000 INFO @ Tue, 13 Aug 2019 04:49:03: 13000000 INFO @ Tue, 13 Aug 2019 04:49:10: 17000000 INFO @ Tue, 13 Aug 2019 04:49:15: 14000000 INFO @ Tue, 13 Aug 2019 04:49:16: 14000000 INFO @ Tue, 13 Aug 2019 04:49:21: 18000000 INFO @ Tue, 13 Aug 2019 04:49:28: 15000000 INFO @ Tue, 13 Aug 2019 04:49:28: 15000000 INFO @ Tue, 13 Aug 2019 04:49:32: 19000000 INFO @ Tue, 13 Aug 2019 04:49:40: 16000000 INFO @ Tue, 13 Aug 2019 04:49:40: 16000000 INFO @ Tue, 13 Aug 2019 04:49:43: 20000000 INFO @ Tue, 13 Aug 2019 04:49:52: 17000000 INFO @ Tue, 13 Aug 2019 04:49:52: 17000000 INFO @ Tue, 13 Aug 2019 04:49:54: 21000000 INFO @ Tue, 13 Aug 2019 04:50:04: 18000000 INFO @ Tue, 13 Aug 2019 04:50:04: 22000000 INFO @ Tue, 13 Aug 2019 04:50:05: 18000000 INFO @ Tue, 13 Aug 2019 04:50:15: 23000000 INFO @ Tue, 13 Aug 2019 04:50:16: 19000000 INFO @ Tue, 13 Aug 2019 04:50:17: 19000000 INFO @ Tue, 13 Aug 2019 04:50:26: 24000000 INFO @ Tue, 13 Aug 2019 04:50:28: 20000000 INFO @ Tue, 13 Aug 2019 04:50:29: 20000000 INFO @ Tue, 13 Aug 2019 04:50:38: 25000000 INFO @ Tue, 13 Aug 2019 04:50:41: 21000000 INFO @ Tue, 13 Aug 2019 04:50:42: 21000000 INFO @ Tue, 13 Aug 2019 04:50:50: 26000000 INFO @ Tue, 13 Aug 2019 04:50:52: 22000000 INFO @ Tue, 13 Aug 2019 04:50:54: 22000000 INFO @ Tue, 13 Aug 2019 04:51:00: 27000000 INFO @ Tue, 13 Aug 2019 04:51:03: 23000000 INFO @ Tue, 13 Aug 2019 04:51:05: 23000000 INFO @ Tue, 13 Aug 2019 04:51:11: 28000000 INFO @ Tue, 13 Aug 2019 04:51:14: 24000000 INFO @ Tue, 13 Aug 2019 04:51:17: 24000000 INFO @ Tue, 13 Aug 2019 04:51:21: 29000000 INFO @ Tue, 13 Aug 2019 04:51:26: 25000000 INFO @ Tue, 13 Aug 2019 04:51:29: 25000000 INFO @ Tue, 13 Aug 2019 04:51:31: 30000000 INFO @ Tue, 13 Aug 2019 04:51:36: 26000000 INFO @ Tue, 13 Aug 2019 04:51:39: 26000000 INFO @ Tue, 13 Aug 2019 04:51:41: 31000000 INFO @ Tue, 13 Aug 2019 04:51:47: 27000000 INFO @ Tue, 13 Aug 2019 04:51:50: 27000000 INFO @ Tue, 13 Aug 2019 04:51:51: 32000000 INFO @ Tue, 13 Aug 2019 04:51:58: 28000000 INFO @ Tue, 13 Aug 2019 04:52:01: 28000000 INFO @ Tue, 13 Aug 2019 04:52:01: 33000000 INFO @ Tue, 13 Aug 2019 04:52:08: 29000000 INFO @ Tue, 13 Aug 2019 04:52:12: 29000000 INFO @ Tue, 13 Aug 2019 04:52:12: 34000000 INFO @ Tue, 13 Aug 2019 04:52:19: 30000000 INFO @ Tue, 13 Aug 2019 04:52:22: 35000000 INFO @ Tue, 13 Aug 2019 04:52:23: 30000000 INFO @ Tue, 13 Aug 2019 04:52:30: 31000000 INFO @ Tue, 13 Aug 2019 04:52:34: 36000000 INFO @ Tue, 13 Aug 2019 04:52:34: 31000000 INFO @ Tue, 13 Aug 2019 04:52:41: 32000000 INFO @ Tue, 13 Aug 2019 04:52:44: 37000000 INFO @ Tue, 13 Aug 2019 04:52:45: 32000000 INFO @ Tue, 13 Aug 2019 04:52:52: 33000000 INFO @ Tue, 13 Aug 2019 04:52:54: 38000000 INFO @ Tue, 13 Aug 2019 04:52:55: 33000000 INFO @ Tue, 13 Aug 2019 04:53:03: 34000000 INFO @ Tue, 13 Aug 2019 04:53:04: 39000000 INFO @ Tue, 13 Aug 2019 04:53:05: 34000000 INFO @ Tue, 13 Aug 2019 04:53:13: 35000000 INFO @ Tue, 13 Aug 2019 04:53:15: 40000000 INFO @ Tue, 13 Aug 2019 04:53:16: 35000000 INFO @ Tue, 13 Aug 2019 04:53:25: 36000000 INFO @ Tue, 13 Aug 2019 04:53:25: 41000000 INFO @ Tue, 13 Aug 2019 04:53:27: 36000000 INFO @ Tue, 13 Aug 2019 04:53:35: 42000000 INFO @ Tue, 13 Aug 2019 04:53:36: 37000000 INFO @ Tue, 13 Aug 2019 04:53:37: 37000000 INFO @ Tue, 13 Aug 2019 04:53:46: 43000000 INFO @ Tue, 13 Aug 2019 04:53:46: 38000000 INFO @ Tue, 13 Aug 2019 04:53:47: 38000000 INFO @ Tue, 13 Aug 2019 04:53:56: 44000000 INFO @ Tue, 13 Aug 2019 04:53:58: 39000000 INFO @ Tue, 13 Aug 2019 04:53:58: 39000000 INFO @ Tue, 13 Aug 2019 04:54:05: 45000000 INFO @ Tue, 13 Aug 2019 04:54:09: 40000000 INFO @ Tue, 13 Aug 2019 04:54:09: 40000000 INFO @ Tue, 13 Aug 2019 04:54:14: 46000000 INFO @ Tue, 13 Aug 2019 04:54:19: 41000000 INFO @ Tue, 13 Aug 2019 04:54:19: 41000000 INFO @ Tue, 13 Aug 2019 04:54:23: 47000000 INFO @ Tue, 13 Aug 2019 04:54:29: 42000000 INFO @ Tue, 13 Aug 2019 04:54:30: 42000000 INFO @ Tue, 13 Aug 2019 04:54:33: 48000000 INFO @ Tue, 13 Aug 2019 04:54:40: 43000000 INFO @ Tue, 13 Aug 2019 04:54:40: 43000000 INFO @ Tue, 13 Aug 2019 04:54:42: 49000000 INFO @ Tue, 13 Aug 2019 04:54:50: 44000000 INFO @ Tue, 13 Aug 2019 04:54:51: 44000000 INFO @ Tue, 13 Aug 2019 04:54:51: 50000000 INFO @ Tue, 13 Aug 2019 04:54:59: 45000000 INFO @ Tue, 13 Aug 2019 04:54:59: 51000000 INFO @ Tue, 13 Aug 2019 04:55:01: 45000000 INFO @ Tue, 13 Aug 2019 04:55:08: 52000000 INFO @ Tue, 13 Aug 2019 04:55:09: 46000000 INFO @ Tue, 13 Aug 2019 04:55:11: 46000000 INFO @ Tue, 13 Aug 2019 04:55:16: 53000000 INFO @ Tue, 13 Aug 2019 04:55:19: 47000000 INFO @ Tue, 13 Aug 2019 04:55:21: 47000000 INFO @ Tue, 13 Aug 2019 04:55:25: 54000000 INFO @ Tue, 13 Aug 2019 04:55:29: 48000000 INFO @ Tue, 13 Aug 2019 04:55:31: 48000000 INFO @ Tue, 13 Aug 2019 04:55:34: 55000000 INFO @ Tue, 13 Aug 2019 04:55:39: 49000000 INFO @ Tue, 13 Aug 2019 04:55:41: 49000000 INFO @ Tue, 13 Aug 2019 04:55:43: 56000000 INFO @ Tue, 13 Aug 2019 04:55:50: 50000000 INFO @ Tue, 13 Aug 2019 04:55:52: 50000000 INFO @ Tue, 13 Aug 2019 04:55:53: 57000000 INFO @ Tue, 13 Aug 2019 04:56:00: 51000000 INFO @ Tue, 13 Aug 2019 04:56:02: 58000000 INFO @ Tue, 13 Aug 2019 04:56:02: 51000000 INFO @ Tue, 13 Aug 2019 04:56:10: 52000000 INFO @ Tue, 13 Aug 2019 04:56:11: 59000000 INFO @ Tue, 13 Aug 2019 04:56:13: 52000000 INFO @ Tue, 13 Aug 2019 04:56:20: 53000000 INFO @ Tue, 13 Aug 2019 04:56:20: 60000000 INFO @ Tue, 13 Aug 2019 04:56:23: 53000000 INFO @ Tue, 13 Aug 2019 04:56:30: 61000000 INFO @ Tue, 13 Aug 2019 04:56:30: 54000000 INFO @ Tue, 13 Aug 2019 04:56:33: 54000000 INFO @ Tue, 13 Aug 2019 04:56:39: 62000000 INFO @ Tue, 13 Aug 2019 04:56:41: 55000000 INFO @ Tue, 13 Aug 2019 04:56:43: 55000000 INFO @ Tue, 13 Aug 2019 04:56:49: 63000000 INFO @ Tue, 13 Aug 2019 04:56:51: 56000000 INFO @ Tue, 13 Aug 2019 04:56:54: 56000000 INFO @ Tue, 13 Aug 2019 04:56:57: 64000000 INFO @ Tue, 13 Aug 2019 04:57:02: 57000000 INFO @ Tue, 13 Aug 2019 04:57:04: 57000000 INFO @ Tue, 13 Aug 2019 04:57:06: 65000000 INFO @ Tue, 13 Aug 2019 04:57:11: 58000000 INFO @ Tue, 13 Aug 2019 04:57:14: 58000000 INFO @ Tue, 13 Aug 2019 04:57:15: 66000000 INFO @ Tue, 13 Aug 2019 04:57:21: 59000000 INFO @ Tue, 13 Aug 2019 04:57:23: 59000000 INFO @ Tue, 13 Aug 2019 04:57:24: 67000000 INFO @ Tue, 13 Aug 2019 04:57:31: 60000000 INFO @ Tue, 13 Aug 2019 04:57:33: 68000000 INFO @ Tue, 13 Aug 2019 04:57:33: 60000000 INFO @ Tue, 13 Aug 2019 04:57:41: 61000000 INFO @ Tue, 13 Aug 2019 04:57:42: 69000000 INFO @ Tue, 13 Aug 2019 04:57:44: 61000000 INFO @ Tue, 13 Aug 2019 04:57:51: 62000000 INFO @ Tue, 13 Aug 2019 04:57:51: 70000000 INFO @ Tue, 13 Aug 2019 04:57:54: 62000000 INFO @ Tue, 13 Aug 2019 04:58:00: 71000000 INFO @ Tue, 13 Aug 2019 04:58:00: 63000000 INFO @ Tue, 13 Aug 2019 04:58:03: 63000000 INFO @ Tue, 13 Aug 2019 04:58:09: 72000000 INFO @ Tue, 13 Aug 2019 04:58:09: 64000000 INFO @ Tue, 13 Aug 2019 04:58:13: 64000000 INFO @ Tue, 13 Aug 2019 04:58:18: 73000000 INFO @ Tue, 13 Aug 2019 04:58:19: 65000000 INFO @ Tue, 13 Aug 2019 04:58:22: 65000000 INFO @ Tue, 13 Aug 2019 04:58:27: 74000000 INFO @ Tue, 13 Aug 2019 04:58:29: 66000000 INFO @ Tue, 13 Aug 2019 04:58:31: 66000000 INFO @ Tue, 13 Aug 2019 04:58:36: 75000000 INFO @ Tue, 13 Aug 2019 04:58:39: 67000000 INFO @ Tue, 13 Aug 2019 04:58:41: 67000000 INFO @ Tue, 13 Aug 2019 04:58:45: 76000000 INFO @ Tue, 13 Aug 2019 04:58:48: 68000000 INFO @ Tue, 13 Aug 2019 04:58:51: 68000000 INFO @ Tue, 13 Aug 2019 04:58:54: 77000000 INFO @ Tue, 13 Aug 2019 04:58:59: 69000000 INFO @ Tue, 13 Aug 2019 04:59:01: 69000000 INFO @ Tue, 13 Aug 2019 04:59:03: 78000000 INFO @ Tue, 13 Aug 2019 04:59:09: 70000000 INFO @ Tue, 13 Aug 2019 04:59:11: 70000000 INFO @ Tue, 13 Aug 2019 04:59:12: 79000000 INFO @ Tue, 13 Aug 2019 04:59:19: 71000000 INFO @ Tue, 13 Aug 2019 04:59:21: 80000000 INFO @ Tue, 13 Aug 2019 04:59:22: 71000000 INFO @ Tue, 13 Aug 2019 04:59:29: 72000000 INFO @ Tue, 13 Aug 2019 04:59:30: 81000000 INFO @ Tue, 13 Aug 2019 04:59:32: 72000000 INFO @ Tue, 13 Aug 2019 04:59:39: 73000000 INFO @ Tue, 13 Aug 2019 04:59:39: 82000000 INFO @ Tue, 13 Aug 2019 04:59:42: 73000000 INFO @ Tue, 13 Aug 2019 04:59:49: 83000000 INFO @ Tue, 13 Aug 2019 04:59:49: 74000000 INFO @ Tue, 13 Aug 2019 04:59:53: 74000000 INFO @ Tue, 13 Aug 2019 04:59:58: 84000000 INFO @ Tue, 13 Aug 2019 04:59:59: 75000000 INFO @ Tue, 13 Aug 2019 05:00:03: 75000000 INFO @ Tue, 13 Aug 2019 05:00:08: 85000000 INFO @ Tue, 13 Aug 2019 05:00:09: 76000000 INFO @ Tue, 13 Aug 2019 05:00:13: 76000000 INFO @ Tue, 13 Aug 2019 05:00:17: 86000000 INFO @ Tue, 13 Aug 2019 05:00:19: 77000000 INFO @ Tue, 13 Aug 2019 05:00:23: 77000000 INFO @ Tue, 13 Aug 2019 05:00:27: 87000000 INFO @ Tue, 13 Aug 2019 05:00:29: 78000000 INFO @ Tue, 13 Aug 2019 05:00:33: 78000000 INFO @ Tue, 13 Aug 2019 05:00:37: 88000000 INFO @ Tue, 13 Aug 2019 05:00:38: 79000000 INFO @ Tue, 13 Aug 2019 05:00:43: 79000000 INFO @ Tue, 13 Aug 2019 05:00:47: 89000000 INFO @ Tue, 13 Aug 2019 05:00:47: 80000000 INFO @ Tue, 13 Aug 2019 05:00:52: 80000000 INFO @ Tue, 13 Aug 2019 05:00:57: 81000000 INFO @ Tue, 13 Aug 2019 05:00:57: 90000000 INFO @ Tue, 13 Aug 2019 05:01:01: 81000000 INFO @ Tue, 13 Aug 2019 05:01:06: 82000000 INFO @ Tue, 13 Aug 2019 05:01:08: 91000000 INFO @ Tue, 13 Aug 2019 05:01:11: 82000000 INFO @ Tue, 13 Aug 2019 05:01:17: 83000000 INFO @ Tue, 13 Aug 2019 05:01:18: 92000000 INFO @ Tue, 13 Aug 2019 05:01:22: 83000000 INFO @ Tue, 13 Aug 2019 05:01:27: 84000000 INFO @ Tue, 13 Aug 2019 05:01:28: 93000000 INFO @ Tue, 13 Aug 2019 05:01:32: 84000000 INFO @ Tue, 13 Aug 2019 05:01:35: #1 tag size is determined as 50 bps INFO @ Tue, 13 Aug 2019 05:01:35: #1 tag size = 50 INFO @ Tue, 13 Aug 2019 05:01:35: #1 total tags in treatment: 45128061 INFO @ Tue, 13 Aug 2019 05:01:35: #1 user defined the maximum tags... INFO @ Tue, 13 Aug 2019 05:01:35: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 13 Aug 2019 05:01:36: #1 tags after filtering in treatment: 31667716 INFO @ Tue, 13 Aug 2019 05:01:36: #1 Redundant rate of treatment: 0.30 INFO @ Tue, 13 Aug 2019 05:01:36: #1 finished! INFO @ Tue, 13 Aug 2019 05:01:36: #2 Build Peak Model... INFO @ Tue, 13 Aug 2019 05:01:36: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 13 Aug 2019 05:01:37: 85000000 INFO @ Tue, 13 Aug 2019 05:01:39: #2 number of paired peaks: 6 WARNING @ Tue, 13 Aug 2019 05:01:39: Too few paired peaks (6) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 13 Aug 2019 05:01:39: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/dm3/SRX5431056/SRX5431056.05_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 2 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX5431056/SRX5431056.05_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX5431056/SRX5431056.05_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX5431056/SRX5431056.05_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Tue, 13 Aug 2019 05:01:42: 85000000 INFO @ Tue, 13 Aug 2019 05:01:48: 86000000 INFO @ Tue, 13 Aug 2019 05:01:52: 86000000 INFO @ Tue, 13 Aug 2019 05:01:58: 87000000 INFO @ Tue, 13 Aug 2019 05:02:02: 87000000 INFO @ Tue, 13 Aug 2019 05:02:07: 88000000 INFO @ Tue, 13 Aug 2019 05:02:12: 88000000 INFO @ Tue, 13 Aug 2019 05:02:17: 89000000 INFO @ Tue, 13 Aug 2019 05:02:22: 89000000 INFO @ Tue, 13 Aug 2019 05:02:26: 90000000 INFO @ Tue, 13 Aug 2019 05:02:32: 90000000 INFO @ Tue, 13 Aug 2019 05:02:36: 91000000 INFO @ Tue, 13 Aug 2019 05:02:41: 91000000 INFO @ Tue, 13 Aug 2019 05:02:45: 92000000 INFO @ Tue, 13 Aug 2019 05:02:50: 92000000 INFO @ Tue, 13 Aug 2019 05:02:55: 93000000 INFO @ Tue, 13 Aug 2019 05:02:59: 93000000 INFO @ Tue, 13 Aug 2019 05:03:01: #1 tag size is determined as 50 bps INFO @ Tue, 13 Aug 2019 05:03:01: #1 tag size = 50 INFO @ Tue, 13 Aug 2019 05:03:01: #1 total tags in treatment: 45128061 INFO @ Tue, 13 Aug 2019 05:03:01: #1 user defined the maximum tags... INFO @ Tue, 13 Aug 2019 05:03:01: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 13 Aug 2019 05:03:03: #1 tags after filtering in treatment: 31667716 INFO @ Tue, 13 Aug 2019 05:03:03: #1 Redundant rate of treatment: 0.30 INFO @ Tue, 13 Aug 2019 05:03:03: #1 finished! INFO @ Tue, 13 Aug 2019 05:03:03: #2 Build Peak Model... INFO @ Tue, 13 Aug 2019 05:03:03: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 13 Aug 2019 05:03:05: #2 number of paired peaks: 6 WARNING @ Tue, 13 Aug 2019 05:03:05: Too few paired peaks (6) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 13 Aug 2019 05:03:05: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/dm3/SRX5431056/SRX5431056.10_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX5431056/SRX5431056.10_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX5431056/SRX5431056.10_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX5431056/SRX5431056.10_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Tue, 13 Aug 2019 05:03:05: #1 tag size is determined as 50 bps INFO @ Tue, 13 Aug 2019 05:03:05: #1 tag size = 50 INFO @ Tue, 13 Aug 2019 05:03:05: #1 total tags in treatment: 45128061 INFO @ Tue, 13 Aug 2019 05:03:05: #1 user defined the maximum tags... INFO @ Tue, 13 Aug 2019 05:03:05: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 13 Aug 2019 05:03:07: #1 tags after filtering in treatment: 31667716 INFO @ Tue, 13 Aug 2019 05:03:07: #1 Redundant rate of treatment: 0.30 INFO @ Tue, 13 Aug 2019 05:03:07: #1 finished! INFO @ Tue, 13 Aug 2019 05:03:07: #2 Build Peak Model... INFO @ Tue, 13 Aug 2019 05:03:07: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 13 Aug 2019 05:03:09: #2 number of paired peaks: 6 WARNING @ Tue, 13 Aug 2019 05:03:09: Too few paired peaks (6) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 13 Aug 2019 05:03:09: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/dm3/SRX5431056/SRX5431056.20_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX5431056/SRX5431056.20_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX5431056/SRX5431056.20_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX5431056/SRX5431056.20_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。