Job ID = 5720830 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2020-04-15T16:49:48 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2020-04-15T16:50:10 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2020-04-15T16:50:10 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2020-04-15T17:17:27 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2020-04-15T17:20:16 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) spots read : 86,697,302 reads read : 173,394,604 reads written : 173,394,604 rm: cannot remove ‘[DSE]RR*’: No such file or directory fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:54:53 86697302 reads; of these: 86697302 (100.00%) were paired; of these: 2819175 (3.25%) aligned concordantly 0 times 70354003 (81.15%) aligned concordantly exactly 1 time 13524124 (15.60%) aligned concordantly >1 times ---- 2819175 pairs aligned concordantly 0 times; of these: 140398 (4.98%) aligned discordantly 1 time ---- 2678777 pairs aligned 0 times concordantly or discordantly; of these: 5357554 mates make up the pairs; of these: 2945219 (54.97%) aligned 0 times 1839157 (34.33%) aligned exactly 1 time 573178 (10.70%) aligned >1 times 98.30% overall alignment rate Time searching: 01:54:53 Overall time: 01:54:53 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 72 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 24507352 / 83992532 = 0.2918 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Thu, 16 Apr 2020 05:01:11: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX5416205/SRX5416205.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX5416205/SRX5416205.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX5416205/SRX5416205.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX5416205/SRX5416205.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Thu, 16 Apr 2020 05:01:11: #1 read tag files... INFO @ Thu, 16 Apr 2020 05:01:11: #1 read treatment tags... INFO @ Thu, 16 Apr 2020 05:01:16: 1000000 INFO @ Thu, 16 Apr 2020 05:01:21: 2000000 INFO @ Thu, 16 Apr 2020 05:01:26: 3000000 INFO @ Thu, 16 Apr 2020 05:01:31: 4000000 INFO @ Thu, 16 Apr 2020 05:01:37: 5000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Thu, 16 Apr 2020 05:01:40: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX5416205/SRX5416205.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX5416205/SRX5416205.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX5416205/SRX5416205.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX5416205/SRX5416205.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Thu, 16 Apr 2020 05:01:40: #1 read tag files... INFO @ Thu, 16 Apr 2020 05:01:40: #1 read treatment tags... INFO @ Thu, 16 Apr 2020 05:01:42: 6000000 INFO @ Thu, 16 Apr 2020 05:01:46: 1000000 INFO @ Thu, 16 Apr 2020 05:01:48: 7000000 INFO @ Thu, 16 Apr 2020 05:01:52: 2000000 INFO @ Thu, 16 Apr 2020 05:01:54: 8000000 INFO @ Thu, 16 Apr 2020 05:01:58: 3000000 INFO @ Thu, 16 Apr 2020 05:02:00: 9000000 INFO @ Thu, 16 Apr 2020 05:02:04: 4000000 INFO @ Thu, 16 Apr 2020 05:02:06: 10000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Thu, 16 Apr 2020 05:02:10: 5000000 INFO @ Thu, 16 Apr 2020 05:02:10: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX5416205/SRX5416205.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX5416205/SRX5416205.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX5416205/SRX5416205.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX5416205/SRX5416205.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Thu, 16 Apr 2020 05:02:10: #1 read tag files... INFO @ Thu, 16 Apr 2020 05:02:10: #1 read treatment tags... INFO @ Thu, 16 Apr 2020 05:02:13: 11000000 INFO @ Thu, 16 Apr 2020 05:02:16: 6000000 INFO @ Thu, 16 Apr 2020 05:02:16: 1000000 INFO @ Thu, 16 Apr 2020 05:02:19: 12000000 INFO @ Thu, 16 Apr 2020 05:02:22: 7000000 INFO @ Thu, 16 Apr 2020 05:02:22: 2000000 INFO @ Thu, 16 Apr 2020 05:02:25: 13000000 INFO @ Thu, 16 Apr 2020 05:02:28: 8000000 INFO @ Thu, 16 Apr 2020 05:02:28: 3000000 INFO @ Thu, 16 Apr 2020 05:02:32: 14000000 INFO @ Thu, 16 Apr 2020 05:02:34: 9000000 INFO @ Thu, 16 Apr 2020 05:02:34: 4000000 INFO @ Thu, 16 Apr 2020 05:02:38: 15000000 INFO @ Thu, 16 Apr 2020 05:02:40: 10000000 INFO @ Thu, 16 Apr 2020 05:02:41: 5000000 INFO @ Thu, 16 Apr 2020 05:02:44: 16000000 INFO @ Thu, 16 Apr 2020 05:02:46: 11000000 INFO @ Thu, 16 Apr 2020 05:02:47: 6000000 INFO @ Thu, 16 Apr 2020 05:02:50: 17000000 INFO @ Thu, 16 Apr 2020 05:02:52: 12000000 INFO @ Thu, 16 Apr 2020 05:02:53: 7000000 INFO @ Thu, 16 Apr 2020 05:02:57: 18000000 INFO @ Thu, 16 Apr 2020 05:02:58: 13000000 INFO @ Thu, 16 Apr 2020 05:02:59: 8000000 INFO @ Thu, 16 Apr 2020 05:03:03: 19000000 INFO @ Thu, 16 Apr 2020 05:03:04: 14000000 INFO @ Thu, 16 Apr 2020 05:03:05: 9000000 INFO @ Thu, 16 Apr 2020 05:03:09: 20000000 INFO @ Thu, 16 Apr 2020 05:03:10: 15000000 INFO @ Thu, 16 Apr 2020 05:03:11: 10000000 INFO @ Thu, 16 Apr 2020 05:03:15: 21000000 INFO @ Thu, 16 Apr 2020 05:03:16: 16000000 INFO @ Thu, 16 Apr 2020 05:03:17: 11000000 INFO @ Thu, 16 Apr 2020 05:03:21: 22000000 INFO @ Thu, 16 Apr 2020 05:03:22: 17000000 INFO @ Thu, 16 Apr 2020 05:03:23: 12000000 INFO @ Thu, 16 Apr 2020 05:03:27: 23000000 INFO @ Thu, 16 Apr 2020 05:03:28: 18000000 INFO @ Thu, 16 Apr 2020 05:03:30: 13000000 INFO @ Thu, 16 Apr 2020 05:03:34: 24000000 INFO @ Thu, 16 Apr 2020 05:03:34: 19000000 INFO @ Thu, 16 Apr 2020 05:03:36: 14000000 INFO @ Thu, 16 Apr 2020 05:03:40: 25000000 INFO @ Thu, 16 Apr 2020 05:03:40: 20000000 INFO @ Thu, 16 Apr 2020 05:03:42: 15000000 INFO @ Thu, 16 Apr 2020 05:03:46: 26000000 INFO @ Thu, 16 Apr 2020 05:03:46: 21000000 INFO @ Thu, 16 Apr 2020 05:03:48: 16000000 INFO @ Thu, 16 Apr 2020 05:03:52: 27000000 INFO @ Thu, 16 Apr 2020 05:03:52: 22000000 INFO @ Thu, 16 Apr 2020 05:03:54: 17000000 INFO @ Thu, 16 Apr 2020 05:03:58: 23000000 INFO @ Thu, 16 Apr 2020 05:03:58: 28000000 INFO @ Thu, 16 Apr 2020 05:04:00: 18000000 INFO @ Thu, 16 Apr 2020 05:04:04: 24000000 INFO @ Thu, 16 Apr 2020 05:04:04: 29000000 INFO @ Thu, 16 Apr 2020 05:04:06: 19000000 INFO @ Thu, 16 Apr 2020 05:04:10: 25000000 INFO @ Thu, 16 Apr 2020 05:04:10: 30000000 INFO @ Thu, 16 Apr 2020 05:04:12: 20000000 INFO @ Thu, 16 Apr 2020 05:04:15: 26000000 INFO @ Thu, 16 Apr 2020 05:04:16: 31000000 INFO @ Thu, 16 Apr 2020 05:04:18: 21000000 INFO @ Thu, 16 Apr 2020 05:04:21: 27000000 INFO @ Thu, 16 Apr 2020 05:04:22: 32000000 INFO @ Thu, 16 Apr 2020 05:04:24: 22000000 INFO @ Thu, 16 Apr 2020 05:04:27: 28000000 INFO @ Thu, 16 Apr 2020 05:04:28: 33000000 INFO @ Thu, 16 Apr 2020 05:04:30: 23000000 INFO @ Thu, 16 Apr 2020 05:04:33: 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INFO @ Thu, 16 Apr 2020 05:05:22: 37000000 INFO @ Thu, 16 Apr 2020 05:05:23: 42000000 INFO @ Thu, 16 Apr 2020 05:05:24: 32000000 INFO @ Thu, 16 Apr 2020 05:05:28: 38000000 INFO @ Thu, 16 Apr 2020 05:05:29: 43000000 INFO @ Thu, 16 Apr 2020 05:05:30: 33000000 INFO @ Thu, 16 Apr 2020 05:05:34: 39000000 INFO @ Thu, 16 Apr 2020 05:05:35: 44000000 INFO @ Thu, 16 Apr 2020 05:05:36: 34000000 INFO @ Thu, 16 Apr 2020 05:05:40: 40000000 INFO @ Thu, 16 Apr 2020 05:05:41: 45000000 INFO @ Thu, 16 Apr 2020 05:05:43: 35000000 INFO @ Thu, 16 Apr 2020 05:05:46: 41000000 INFO @ Thu, 16 Apr 2020 05:05:47: 46000000 INFO @ Thu, 16 Apr 2020 05:05:49: 36000000 INFO @ Thu, 16 Apr 2020 05:05:52: 42000000 INFO @ Thu, 16 Apr 2020 05:05:53: 47000000 INFO @ Thu, 16 Apr 2020 05:05:55: 37000000 INFO @ Thu, 16 Apr 2020 05:05:57: 43000000 INFO @ Thu, 16 Apr 2020 05:05:59: 48000000 INFO @ Thu, 16 Apr 2020 05:06:01: 38000000 INFO @ Thu, 16 Apr 2020 05:06:03: 44000000 INFO @ Thu, 16 Apr 2020 05:06:05: 49000000 INFO @ Thu, 16 Apr 2020 05:06:07: 39000000 INFO @ Thu, 16 Apr 2020 05:06:09: 45000000 INFO @ Thu, 16 Apr 2020 05:06:11: 50000000 INFO @ Thu, 16 Apr 2020 05:06:13: 40000000 INFO @ Thu, 16 Apr 2020 05:06:15: 46000000 INFO @ Thu, 16 Apr 2020 05:06:17: 51000000 INFO @ Thu, 16 Apr 2020 05:06:19: 41000000 INFO @ Thu, 16 Apr 2020 05:06:21: 47000000 INFO @ Thu, 16 Apr 2020 05:06:23: 52000000 INFO @ Thu, 16 Apr 2020 05:06:25: 42000000 INFO @ Thu, 16 Apr 2020 05:06:27: 48000000 INFO @ Thu, 16 Apr 2020 05:06:29: 53000000 INFO @ Thu, 16 Apr 2020 05:06:31: 43000000 INFO @ Thu, 16 Apr 2020 05:06:33: 49000000 INFO @ Thu, 16 Apr 2020 05:06:36: 54000000 INFO @ Thu, 16 Apr 2020 05:06:37: 44000000 INFO @ Thu, 16 Apr 2020 05:06:39: 50000000 INFO @ Thu, 16 Apr 2020 05:06:42: 55000000 INFO @ Thu, 16 Apr 2020 05:06:43: 45000000 INFO @ Thu, 16 Apr 2020 05:06:45: 51000000 INFO @ Thu, 16 Apr 2020 05:06:48: 56000000 INFO @ Thu, 16 Apr 2020 05:06:49: 46000000 INFO @ Thu, 16 Apr 2020 05:06:51: 52000000 INFO @ Thu, 16 Apr 2020 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60000000 INFO @ Thu, 16 Apr 2020 05:07:42: 65000000 INFO @ Thu, 16 Apr 2020 05:07:43: 55000000 INFO @ Thu, 16 Apr 2020 05:07:45: 61000000 INFO @ Thu, 16 Apr 2020 05:07:48: 66000000 INFO @ Thu, 16 Apr 2020 05:07:49: 56000000 INFO @ Thu, 16 Apr 2020 05:07:51: 62000000 INFO @ Thu, 16 Apr 2020 05:07:54: 67000000 INFO @ Thu, 16 Apr 2020 05:07:55: 57000000 INFO @ Thu, 16 Apr 2020 05:07:57: 63000000 INFO @ Thu, 16 Apr 2020 05:08:00: 68000000 INFO @ Thu, 16 Apr 2020 05:08:01: 58000000 INFO @ Thu, 16 Apr 2020 05:08:03: 64000000 INFO @ Thu, 16 Apr 2020 05:08:06: 69000000 INFO @ Thu, 16 Apr 2020 05:08:07: 59000000 INFO @ Thu, 16 Apr 2020 05:08:09: 65000000 INFO @ Thu, 16 Apr 2020 05:08:12: 70000000 INFO @ Thu, 16 Apr 2020 05:08:13: 60000000 INFO @ Thu, 16 Apr 2020 05:08:15: 66000000 INFO @ Thu, 16 Apr 2020 05:08:18: 71000000 INFO @ Thu, 16 Apr 2020 05:08:19: 61000000 INFO @ Thu, 16 Apr 2020 05:08:21: 67000000 INFO @ Thu, 16 Apr 2020 05:08:24: 72000000 INFO @ Thu, 16 Apr 2020 05:08:25: 62000000 INFO @ Thu, 16 Apr 2020 05:08:27: 68000000 INFO @ Thu, 16 Apr 2020 05:08:30: 73000000 INFO @ Thu, 16 Apr 2020 05:08:31: 63000000 INFO @ Thu, 16 Apr 2020 05:08:33: 69000000 INFO @ Thu, 16 Apr 2020 05:08:36: 74000000 INFO @ Thu, 16 Apr 2020 05:08:37: 64000000 INFO @ Thu, 16 Apr 2020 05:08:39: 70000000 INFO @ Thu, 16 Apr 2020 05:08:42: 75000000 INFO @ Thu, 16 Apr 2020 05:08:43: 65000000 INFO @ Thu, 16 Apr 2020 05:08:45: 71000000 INFO @ Thu, 16 Apr 2020 05:08:48: 76000000 INFO @ Thu, 16 Apr 2020 05:08:49: 66000000 INFO @ Thu, 16 Apr 2020 05:08:51: 72000000 INFO @ Thu, 16 Apr 2020 05:08:55: 77000000 INFO @ Thu, 16 Apr 2020 05:08:55: 67000000 INFO @ Thu, 16 Apr 2020 05:08:57: 73000000 INFO @ Thu, 16 Apr 2020 05:09:01: 78000000 INFO @ Thu, 16 Apr 2020 05:09:01: 68000000 INFO @ Thu, 16 Apr 2020 05:09:03: 74000000 INFO @ Thu, 16 Apr 2020 05:09:07: 79000000 INFO @ Thu, 16 Apr 2020 05:09:07: 69000000 INFO @ Thu, 16 Apr 2020 05:09:09: 75000000 INFO @ Thu, 16 Apr 2020 05:09:13: 70000000 INFO @ Thu, 16 Apr 2020 05:09:13: 80000000 INFO @ Thu, 16 Apr 2020 05:09:15: 76000000 INFO @ Thu, 16 Apr 2020 05:09:19: 71000000 INFO @ Thu, 16 Apr 2020 05:09:19: 81000000 INFO @ Thu, 16 Apr 2020 05:09:21: 77000000 INFO @ Thu, 16 Apr 2020 05:09:25: 72000000 INFO @ Thu, 16 Apr 2020 05:09:25: 82000000 INFO @ Thu, 16 Apr 2020 05:09:27: 78000000 INFO @ Thu, 16 Apr 2020 05:09:31: 73000000 INFO @ Thu, 16 Apr 2020 05:09:31: 83000000 INFO @ Thu, 16 Apr 2020 05:09:33: 79000000 INFO @ Thu, 16 Apr 2020 05:09:37: 74000000 INFO @ Thu, 16 Apr 2020 05:09:37: 84000000 INFO @ Thu, 16 Apr 2020 05:09:39: 80000000 INFO @ Thu, 16 Apr 2020 05:09:43: 75000000 INFO @ Thu, 16 Apr 2020 05:09:43: 85000000 INFO @ Thu, 16 Apr 2020 05:09:45: 81000000 INFO @ Thu, 16 Apr 2020 05:09:49: 76000000 INFO @ Thu, 16 Apr 2020 05:09:49: 86000000 INFO @ Thu, 16 Apr 2020 05:09:51: 82000000 INFO @ Thu, 16 Apr 2020 05:09:55: 87000000 INFO @ Thu, 16 Apr 2020 05:09:55: 77000000 INFO @ Thu, 16 Apr 2020 05:09:57: 83000000 INFO @ Thu, 16 Apr 2020 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91000000 INFO @ Thu, 16 Apr 2020 05:10:49: 96000000 INFO @ Thu, 16 Apr 2020 05:10:49: 86000000 INFO @ Thu, 16 Apr 2020 05:10:50: 92000000 INFO @ Thu, 16 Apr 2020 05:10:55: 87000000 INFO @ Thu, 16 Apr 2020 05:10:55: 97000000 INFO @ Thu, 16 Apr 2020 05:10:56: 93000000 INFO @ Thu, 16 Apr 2020 05:11:01: 88000000 INFO @ Thu, 16 Apr 2020 05:11:02: 98000000 INFO @ Thu, 16 Apr 2020 05:11:02: 94000000 INFO @ Thu, 16 Apr 2020 05:11:07: 89000000 INFO @ Thu, 16 Apr 2020 05:11:08: 99000000 INFO @ Thu, 16 Apr 2020 05:11:08: 95000000 INFO @ Thu, 16 Apr 2020 05:11:13: 90000000 INFO @ Thu, 16 Apr 2020 05:11:14: 100000000 INFO @ Thu, 16 Apr 2020 05:11:14: 96000000 INFO @ Thu, 16 Apr 2020 05:11:19: 91000000 INFO @ Thu, 16 Apr 2020 05:11:20: 101000000 INFO @ Thu, 16 Apr 2020 05:11:20: 97000000 INFO @ Thu, 16 Apr 2020 05:11:25: 92000000 INFO @ Thu, 16 Apr 2020 05:11:26: 102000000 INFO @ Thu, 16 Apr 2020 05:11:27: 98000000 INFO @ Thu, 16 Apr 2020 05:11:31: 93000000 INFO @ Thu, 16 Apr 2020 05:11:32: 103000000 INFO @ Thu, 16 Apr 2020 05:11:33: 99000000 INFO @ Thu, 16 Apr 2020 05:11:37: 94000000 INFO @ Thu, 16 Apr 2020 05:11:39: 104000000 INFO @ Thu, 16 Apr 2020 05:11:39: 100000000 INFO @ Thu, 16 Apr 2020 05:11:43: 95000000 INFO @ Thu, 16 Apr 2020 05:11:45: 105000000 INFO @ Thu, 16 Apr 2020 05:11:45: 101000000 INFO @ Thu, 16 Apr 2020 05:11:49: 96000000 INFO @ Thu, 16 Apr 2020 05:11:51: 106000000 INFO @ Thu, 16 Apr 2020 05:11:51: 102000000 INFO @ Thu, 16 Apr 2020 05:11:56: 97000000 INFO @ Thu, 16 Apr 2020 05:11:57: 107000000 INFO @ Thu, 16 Apr 2020 05:11:57: 103000000 INFO @ Thu, 16 Apr 2020 05:12:02: 98000000 INFO @ Thu, 16 Apr 2020 05:12:03: 108000000 INFO @ Thu, 16 Apr 2020 05:12:03: 104000000 INFO @ Thu, 16 Apr 2020 05:12:08: 99000000 INFO @ Thu, 16 Apr 2020 05:12:09: 109000000 INFO @ Thu, 16 Apr 2020 05:12:09: 105000000 INFO @ Thu, 16 Apr 2020 05:12:14: 100000000 INFO @ Thu, 16 Apr 2020 05:12:15: 110000000 INFO @ Thu, 16 Apr 2020 05:12:15: 106000000 INFO @ Thu, 16 Apr 2020 05:12:20: 101000000 INFO @ Thu, 16 Apr 2020 05:12:21: 111000000 INFO @ Thu, 16 Apr 2020 05:12:21: 107000000 INFO @ Thu, 16 Apr 2020 05:12:26: 102000000 INFO @ Thu, 16 Apr 2020 05:12:27: 112000000 INFO @ Thu, 16 Apr 2020 05:12:27: 108000000 INFO @ Thu, 16 Apr 2020 05:12:32: 103000000 INFO @ Thu, 16 Apr 2020 05:12:33: 113000000 INFO @ Thu, 16 Apr 2020 05:12:33: 109000000 INFO @ Thu, 16 Apr 2020 05:12:38: 104000000 INFO @ Thu, 16 Apr 2020 05:12:39: 114000000 INFO @ Thu, 16 Apr 2020 05:12:39: 110000000 INFO @ Thu, 16 Apr 2020 05:12:44: 105000000 INFO @ Thu, 16 Apr 2020 05:12:45: 115000000 INFO @ Thu, 16 Apr 2020 05:12:45: 111000000 INFO @ Thu, 16 Apr 2020 05:12:50: 106000000 INFO @ Thu, 16 Apr 2020 05:12:51: 112000000 INFO @ Thu, 16 Apr 2020 05:12:51: 116000000 INFO @ Thu, 16 Apr 2020 05:12:56: 107000000 INFO @ Thu, 16 Apr 2020 05:12:57: 113000000 INFO @ Thu, 16 Apr 2020 05:12:57: 117000000 INFO @ Thu, 16 Apr 2020 05:13:02: 108000000 INFO @ Thu, 16 Apr 2020 05:13:03: 114000000 INFO @ Thu, 16 Apr 2020 05:13:03: 118000000 INFO @ Thu, 16 Apr 2020 05:13:08: 109000000 INFO @ Thu, 16 Apr 2020 05:13:09: 115000000 INFO @ Thu, 16 Apr 2020 05:13:09: 119000000 INFO @ Thu, 16 Apr 2020 05:13:14: 110000000 INFO @ Thu, 16 Apr 2020 05:13:15: 116000000 INFO @ Thu, 16 Apr 2020 05:13:15: 120000000 INFO @ Thu, 16 Apr 2020 05:13:20: 111000000 INFO @ Thu, 16 Apr 2020 05:13:21: 117000000 INFO @ Thu, 16 Apr 2020 05:13:21: 121000000 INFO @ Thu, 16 Apr 2020 05:13:24: #1 tag size is determined as 49 bps INFO @ Thu, 16 Apr 2020 05:13:24: #1 tag size = 49 INFO @ Thu, 16 Apr 2020 05:13:24: #1 total tags in treatment: 59408480 INFO @ Thu, 16 Apr 2020 05:13:24: #1 user defined the maximum tags... INFO @ Thu, 16 Apr 2020 05:13:24: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Thu, 16 Apr 2020 05:13:25: #1 tags after filtering in treatment: 48615979 INFO @ Thu, 16 Apr 2020 05:13:25: #1 Redundant rate of treatment: 0.18 INFO @ Thu, 16 Apr 2020 05:13:25: #1 finished! INFO @ Thu, 16 Apr 2020 05:13:25: #2 Build Peak Model... INFO @ Thu, 16 Apr 2020 05:13:25: #2 looking for paired plus/minus strand peaks... INFO @ Thu, 16 Apr 2020 05:13:26: 112000000 INFO @ Thu, 16 Apr 2020 05:13:27: 118000000 INFO @ Thu, 16 Apr 2020 05:13:28: #2 number of paired peaks: 0 WARNING @ Thu, 16 Apr 2020 05:13:28: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Thu, 16 Apr 2020 05:13:28: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/dm3/SRX5416205/SRX5416205.05_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX5416205/SRX5416205.05_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX5416205/SRX5416205.05_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX5416205/SRX5416205.05_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Thu, 16 Apr 2020 05:13:32: 113000000 INFO @ Thu, 16 Apr 2020 05:13:33: 119000000 INFO @ Thu, 16 Apr 2020 05:13:38: 114000000 INFO @ Thu, 16 Apr 2020 05:13:39: 120000000 INFO @ Thu, 16 Apr 2020 05:13:44: 115000000 INFO @ Thu, 16 Apr 2020 05:13:45: 121000000 INFO @ Thu, 16 Apr 2020 05:13:48: #1 tag size is determined as 49 bps INFO @ Thu, 16 Apr 2020 05:13:48: #1 tag size = 49 INFO @ Thu, 16 Apr 2020 05:13:48: #1 total tags in treatment: 59408480 INFO @ Thu, 16 Apr 2020 05:13:48: #1 user defined the maximum tags... INFO @ Thu, 16 Apr 2020 05:13:48: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Thu, 16 Apr 2020 05:13:49: #1 tags after filtering in treatment: 48615979 INFO @ Thu, 16 Apr 2020 05:13:49: #1 Redundant rate of treatment: 0.18 INFO @ Thu, 16 Apr 2020 05:13:49: #1 finished! INFO @ Thu, 16 Apr 2020 05:13:49: #2 Build Peak Model... INFO @ Thu, 16 Apr 2020 05:13:49: #2 looking for paired plus/minus strand peaks... INFO @ Thu, 16 Apr 2020 05:13:50: 116000000 INFO @ Thu, 16 Apr 2020 05:13:52: #2 number of paired peaks: 0 WARNING @ Thu, 16 Apr 2020 05:13:52: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Thu, 16 Apr 2020 05:13:52: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/dm3/SRX5416205/SRX5416205.10_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX5416205/SRX5416205.10_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX5416205/SRX5416205.10_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX5416205/SRX5416205.10_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Thu, 16 Apr 2020 05:13:55: 117000000 INFO @ Thu, 16 Apr 2020 05:14:01: 118000000 INFO @ Thu, 16 Apr 2020 05:14:07: 119000000 INFO @ Thu, 16 Apr 2020 05:14:12: 120000000 INFO @ Thu, 16 Apr 2020 05:14:18: 121000000 INFO @ Thu, 16 Apr 2020 05:14:21: #1 tag size is determined as 49 bps INFO @ Thu, 16 Apr 2020 05:14:21: #1 tag size = 49 INFO @ Thu, 16 Apr 2020 05:14:21: #1 total tags in treatment: 59408480 INFO @ Thu, 16 Apr 2020 05:14:21: #1 user defined the maximum tags... INFO @ Thu, 16 Apr 2020 05:14:21: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Thu, 16 Apr 2020 05:14:22: #1 tags after filtering in treatment: 48615979 INFO @ Thu, 16 Apr 2020 05:14:22: #1 Redundant rate of treatment: 0.18 INFO @ Thu, 16 Apr 2020 05:14:22: #1 finished! INFO @ Thu, 16 Apr 2020 05:14:22: #2 Build Peak Model... INFO @ Thu, 16 Apr 2020 05:14:22: #2 looking for paired plus/minus strand peaks... INFO @ Thu, 16 Apr 2020 05:14:25: #2 number of paired peaks: 0 WARNING @ Thu, 16 Apr 2020 05:14:25: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Thu, 16 Apr 2020 05:14:25: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/dm3/SRX5416205/SRX5416205.20_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX5416205/SRX5416205.20_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX5416205/SRX5416205.20_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX5416205/SRX5416205.20_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。