Job ID = 6528354 SRX = SRX5416198 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2020-06-29T14:47:25 prefetch.2.10.7: 1) Downloading 'SRR8617248'... 2020-06-29T14:47:25 prefetch.2.10.7: Downloading via HTTPS... 2020-06-29T14:56:46 prefetch.2.10.7: HTTPS download succeed 2020-06-29T14:56:46 prefetch.2.10.7: 1) 'SRR8617248' was downloaded successfully 2020-06-29T14:56:46 prefetch.2.10.7: 'SRR8617248' has 0 unresolved dependencies Read 75293121 spots for SRR8617248/SRR8617248.sra Written 75293121 spots for SRR8617248/SRR8617248.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:33:18 75293121 reads; of these: 75293121 (100.00%) were paired; of these: 2663422 (3.54%) aligned concordantly 0 times 61426880 (81.58%) aligned concordantly exactly 1 time 11202819 (14.88%) aligned concordantly >1 times ---- 2663422 pairs aligned concordantly 0 times; of these: 168297 (6.32%) aligned discordantly 1 time ---- 2495125 pairs aligned 0 times concordantly or discordantly; of these: 4990250 mates make up the pairs; of these: 2998692 (60.09%) aligned 0 times 1470464 (29.47%) aligned exactly 1 time 521094 (10.44%) aligned >1 times 98.01% overall alignment rate Time searching: 01:33:18 Overall time: 01:33:18 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 64 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 12994438 / 72754531 = 0.1786 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 30 Jun 2020 02:43:16: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX5416198/SRX5416198.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX5416198/SRX5416198.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX5416198/SRX5416198.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX5416198/SRX5416198.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 30 Jun 2020 02:43:16: #1 read tag files... INFO @ Tue, 30 Jun 2020 02:43:16: #1 read treatment tags... INFO @ Tue, 30 Jun 2020 02:43:21: 1000000 INFO @ Tue, 30 Jun 2020 02:43:25: 2000000 INFO @ Tue, 30 Jun 2020 02:43:29: 3000000 INFO @ Tue, 30 Jun 2020 02:43:34: 4000000 INFO @ Tue, 30 Jun 2020 02:43:38: 5000000 INFO @ Tue, 30 Jun 2020 02:43:42: 6000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 30 Jun 2020 02:43:46: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX5416198/SRX5416198.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX5416198/SRX5416198.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX5416198/SRX5416198.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX5416198/SRX5416198.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 30 Jun 2020 02:43:46: #1 read tag files... INFO @ Tue, 30 Jun 2020 02:43:46: #1 read treatment tags... INFO @ Tue, 30 Jun 2020 02:43:47: 7000000 INFO @ Tue, 30 Jun 2020 02:43:51: 1000000 INFO @ Tue, 30 Jun 2020 02:43:51: 8000000 INFO @ Tue, 30 Jun 2020 02:43:56: 2000000 INFO @ Tue, 30 Jun 2020 02:43:56: 9000000 INFO @ Tue, 30 Jun 2020 02:44:00: 3000000 INFO @ Tue, 30 Jun 2020 02:44:01: 10000000 INFO @ Tue, 30 Jun 2020 02:44:05: 4000000 INFO @ Tue, 30 Jun 2020 02:44:05: 11000000 INFO @ Tue, 30 Jun 2020 02:44:09: 5000000 INFO @ Tue, 30 Jun 2020 02:44:10: 12000000 INFO @ Tue, 30 Jun 2020 02:44:14: 6000000 INFO @ Tue, 30 Jun 2020 02:44:14: 13000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 30 Jun 2020 02:44:16: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX5416198/SRX5416198.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX5416198/SRX5416198.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX5416198/SRX5416198.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX5416198/SRX5416198.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 30 Jun 2020 02:44:16: #1 read tag files... INFO @ Tue, 30 Jun 2020 02:44:16: #1 read treatment tags... INFO @ Tue, 30 Jun 2020 02:44:19: 7000000 INFO @ Tue, 30 Jun 2020 02:44:19: 14000000 INFO @ Tue, 30 Jun 2020 02:44:21: 1000000 INFO @ Tue, 30 Jun 2020 02:44:23: 8000000 INFO @ Tue, 30 Jun 2020 02:44:24: 15000000 INFO @ Tue, 30 Jun 2020 02:44:26: 2000000 INFO @ Tue, 30 Jun 2020 02:44:28: 9000000 INFO @ Tue, 30 Jun 2020 02:44:28: 16000000 INFO @ Tue, 30 Jun 2020 02:44:30: 3000000 INFO @ Tue, 30 Jun 2020 02:44:33: 10000000 INFO @ Tue, 30 Jun 2020 02:44:33: 17000000 INFO @ Tue, 30 Jun 2020 02:44:35: 4000000 INFO @ Tue, 30 Jun 2020 02:44:37: 11000000 INFO @ Tue, 30 Jun 2020 02:44:38: 18000000 INFO @ Tue, 30 Jun 2020 02:44:40: 5000000 INFO @ Tue, 30 Jun 2020 02:44:42: 12000000 INFO @ Tue, 30 Jun 2020 02:44:42: 19000000 INFO @ Tue, 30 Jun 2020 02:44:44: 6000000 INFO @ Tue, 30 Jun 2020 02:44:47: 13000000 INFO @ Tue, 30 Jun 2020 02:44:47: 20000000 INFO @ Tue, 30 Jun 2020 02:44:49: 7000000 INFO @ Tue, 30 Jun 2020 02:44:51: 14000000 INFO @ Tue, 30 Jun 2020 02:44:52: 21000000 INFO @ Tue, 30 Jun 2020 02:44:53: 8000000 INFO @ Tue, 30 Jun 2020 02:44:56: 15000000 INFO @ Tue, 30 Jun 2020 02:44:56: 22000000 INFO @ Tue, 30 Jun 2020 02:44:58: 9000000 INFO @ Tue, 30 Jun 2020 02:45:01: 16000000 INFO @ Tue, 30 Jun 2020 02:45:01: 23000000 INFO @ Tue, 30 Jun 2020 02:45:03: 10000000 INFO @ Tue, 30 Jun 2020 02:45:05: 17000000 INFO @ Tue, 30 Jun 2020 02:45:06: 24000000 INFO @ Tue, 30 Jun 2020 02:45:07: 11000000 INFO @ Tue, 30 Jun 2020 02:45:10: 18000000 INFO @ Tue, 30 Jun 2020 02:45:10: 25000000 INFO @ Tue, 30 Jun 2020 02:45:12: 12000000 INFO @ Tue, 30 Jun 2020 02:45:15: 19000000 INFO @ Tue, 30 Jun 2020 02:45:15: 26000000 INFO @ Tue, 30 Jun 2020 02:45:17: 13000000 INFO @ Tue, 30 Jun 2020 02:45:20: 27000000 INFO @ Tue, 30 Jun 2020 02:45:20: 20000000 INFO @ Tue, 30 Jun 2020 02:45:21: 14000000 INFO @ Tue, 30 Jun 2020 02:45:24: 28000000 INFO @ Tue, 30 Jun 2020 02:45:24: 21000000 INFO @ Tue, 30 Jun 2020 02:45:26: 15000000 INFO @ Tue, 30 Jun 2020 02:45:29: 29000000 INFO @ Tue, 30 Jun 2020 02:45:29: 22000000 INFO @ Tue, 30 Jun 2020 02:45:31: 16000000 INFO @ Tue, 30 Jun 2020 02:45:34: 30000000 INFO @ Tue, 30 Jun 2020 02:45:34: 23000000 INFO @ Tue, 30 Jun 2020 02:45:35: 17000000 INFO @ Tue, 30 Jun 2020 02:45:38: 31000000 INFO @ Tue, 30 Jun 2020 02:45:38: 24000000 INFO @ Tue, 30 Jun 2020 02:45:40: 18000000 INFO @ Tue, 30 Jun 2020 02:45:43: 25000000 INFO @ Tue, 30 Jun 2020 02:45:43: 32000000 INFO @ Tue, 30 Jun 2020 02:45:45: 19000000 INFO @ Tue, 30 Jun 2020 02:45:48: 26000000 INFO @ Tue, 30 Jun 2020 02:45:48: 33000000 INFO @ Tue, 30 Jun 2020 02:45:49: 20000000 INFO @ Tue, 30 Jun 2020 02:45:52: 27000000 INFO @ Tue, 30 Jun 2020 02:45:53: 34000000 INFO @ Tue, 30 Jun 2020 02:45:54: 21000000 INFO @ Tue, 30 Jun 2020 02:45:57: 28000000 INFO @ Tue, 30 Jun 2020 02:45:57: 35000000 INFO @ Tue, 30 Jun 2020 02:45:59: 22000000 INFO @ Tue, 30 Jun 2020 02:46:02: 29000000 INFO @ Tue, 30 Jun 2020 02:46:02: 36000000 INFO @ Tue, 30 Jun 2020 02:46:03: 23000000 INFO @ Tue, 30 Jun 2020 02:46:06: 30000000 INFO @ Tue, 30 Jun 2020 02:46:07: 37000000 INFO @ Tue, 30 Jun 2020 02:46:08: 24000000 INFO @ Tue, 30 Jun 2020 02:46:11: 31000000 INFO @ Tue, 30 Jun 2020 02:46:12: 38000000 INFO @ Tue, 30 Jun 2020 02:46:13: 25000000 INFO @ Tue, 30 Jun 2020 02:46:16: 32000000 INFO @ Tue, 30 Jun 2020 02:46:16: 39000000 INFO @ Tue, 30 Jun 2020 02:46:17: 26000000 INFO @ Tue, 30 Jun 2020 02:46:21: 33000000 INFO @ Tue, 30 Jun 2020 02:46:21: 40000000 INFO @ Tue, 30 Jun 2020 02:46:22: 27000000 INFO @ Tue, 30 Jun 2020 02:46:25: 34000000 INFO @ Tue, 30 Jun 2020 02:46:25: 41000000 INFO @ Tue, 30 Jun 2020 02:46:27: 28000000 INFO @ Tue, 30 Jun 2020 02:46:30: 35000000 INFO @ Tue, 30 Jun 2020 02:46:30: 42000000 INFO @ Tue, 30 Jun 2020 02:46:32: 29000000 INFO @ Tue, 30 Jun 2020 02:46:35: 36000000 INFO @ Tue, 30 Jun 2020 02:46:35: 43000000 INFO @ Tue, 30 Jun 2020 02:46:36: 30000000 INFO @ Tue, 30 Jun 2020 02:46:39: 37000000 INFO @ Tue, 30 Jun 2020 02:46:40: 44000000 INFO @ Tue, 30 Jun 2020 02:46:41: 31000000 INFO @ Tue, 30 Jun 2020 02:46:44: 38000000 INFO @ Tue, 30 Jun 2020 02:46:44: 45000000 INFO @ Tue, 30 Jun 2020 02:46:46: 32000000 INFO @ Tue, 30 Jun 2020 02:46:49: 39000000 INFO @ Tue, 30 Jun 2020 02:46:49: 46000000 INFO @ Tue, 30 Jun 2020 02:46:50: 33000000 INFO @ Tue, 30 Jun 2020 02:46:53: 40000000 INFO @ Tue, 30 Jun 2020 02:46:53: 47000000 INFO @ Tue, 30 Jun 2020 02:46:55: 34000000 INFO @ Tue, 30 Jun 2020 02:46:58: 41000000 INFO @ Tue, 30 Jun 2020 02:46:58: 48000000 INFO @ Tue, 30 Jun 2020 02:47:00: 35000000 INFO @ Tue, 30 Jun 2020 02:47:03: 42000000 INFO @ Tue, 30 Jun 2020 02:47:03: 49000000 INFO @ Tue, 30 Jun 2020 02:47:04: 36000000 INFO @ Tue, 30 Jun 2020 02:47:07: 43000000 INFO @ Tue, 30 Jun 2020 02:47:08: 50000000 INFO @ Tue, 30 Jun 2020 02:47:09: 37000000 INFO @ Tue, 30 Jun 2020 02:47:12: 44000000 INFO @ Tue, 30 Jun 2020 02:47:12: 51000000 INFO @ Tue, 30 Jun 2020 02:47:14: 38000000 INFO @ Tue, 30 Jun 2020 02:47:17: 52000000 INFO @ Tue, 30 Jun 2020 02:47:17: 45000000 INFO @ Tue, 30 Jun 2020 02:47:19: 39000000 INFO @ Tue, 30 Jun 2020 02:47:22: 46000000 INFO @ Tue, 30 Jun 2020 02:47:22: 53000000 INFO @ Tue, 30 Jun 2020 02:47:23: 40000000 INFO @ Tue, 30 Jun 2020 02:47:27: 47000000 INFO @ Tue, 30 Jun 2020 02:47:27: 54000000 INFO @ Tue, 30 Jun 2020 02:47:28: 41000000 INFO @ Tue, 30 Jun 2020 02:47:31: 48000000 INFO @ Tue, 30 Jun 2020 02:47:32: 55000000 INFO @ Tue, 30 Jun 2020 02:47:33: 42000000 INFO @ Tue, 30 Jun 2020 02:47:36: 49000000 INFO @ Tue, 30 Jun 2020 02:47:36: 56000000 INFO @ Tue, 30 Jun 2020 02:47:38: 43000000 INFO @ Tue, 30 Jun 2020 02:47:41: 57000000 INFO @ Tue, 30 Jun 2020 02:47:41: 50000000 INFO @ Tue, 30 Jun 2020 02:47:42: 44000000 INFO @ Tue, 30 Jun 2020 02:47:46: 58000000 INFO @ Tue, 30 Jun 2020 02:47:46: 51000000 INFO @ Tue, 30 Jun 2020 02:47:47: 45000000 INFO @ Tue, 30 Jun 2020 02:47:50: 59000000 INFO @ Tue, 30 Jun 2020 02:47:51: 52000000 INFO @ Tue, 30 Jun 2020 02:47:52: 46000000 INFO @ Tue, 30 Jun 2020 02:47:55: 60000000 INFO @ Tue, 30 Jun 2020 02:47:55: 53000000 INFO @ Tue, 30 Jun 2020 02:47:56: 47000000 INFO @ Tue, 30 Jun 2020 02:48:00: 61000000 INFO @ Tue, 30 Jun 2020 02:48:00: 54000000 INFO @ Tue, 30 Jun 2020 02:48:01: 48000000 INFO @ Tue, 30 Jun 2020 02:48:04: 62000000 INFO @ Tue, 30 Jun 2020 02:48:05: 55000000 INFO @ Tue, 30 Jun 2020 02:48:06: 49000000 INFO @ Tue, 30 Jun 2020 02:48:09: 63000000 INFO @ Tue, 30 Jun 2020 02:48:10: 56000000 INFO @ Tue, 30 Jun 2020 02:48:11: 50000000 INFO @ Tue, 30 Jun 2020 02:48:14: 64000000 INFO @ Tue, 30 Jun 2020 02:48:14: 57000000 INFO @ Tue, 30 Jun 2020 02:48:15: 51000000 INFO @ Tue, 30 Jun 2020 02:48:18: 65000000 INFO @ Tue, 30 Jun 2020 02:48:19: 58000000 INFO @ Tue, 30 Jun 2020 02:48:20: 52000000 INFO @ Tue, 30 Jun 2020 02:48:23: 66000000 INFO @ Tue, 30 Jun 2020 02:48:24: 59000000 INFO @ Tue, 30 Jun 2020 02:48:25: 53000000 INFO @ Tue, 30 Jun 2020 02:48:28: 67000000 INFO @ Tue, 30 Jun 2020 02:48:28: 60000000 INFO @ Tue, 30 Jun 2020 02:48:30: 54000000 INFO @ Tue, 30 Jun 2020 02:48:32: 68000000 INFO @ Tue, 30 Jun 2020 02:48:33: 61000000 INFO @ Tue, 30 Jun 2020 02:48:35: 55000000 INFO @ Tue, 30 Jun 2020 02:48:37: 69000000 INFO @ Tue, 30 Jun 2020 02:48:38: 62000000 INFO @ Tue, 30 Jun 2020 02:48:39: 56000000 INFO @ Tue, 30 Jun 2020 02:48:42: 70000000 INFO @ Tue, 30 Jun 2020 02:48:42: 63000000 INFO @ Tue, 30 Jun 2020 02:48:44: 57000000 INFO @ Tue, 30 Jun 2020 02:48:46: 71000000 INFO @ Tue, 30 Jun 2020 02:48:47: 64000000 INFO @ Tue, 30 Jun 2020 02:48:49: 58000000 INFO @ Tue, 30 Jun 2020 02:48:51: 72000000 INFO @ Tue, 30 Jun 2020 02:48:52: 65000000 INFO @ Tue, 30 Jun 2020 02:48:53: 59000000 INFO @ Tue, 30 Jun 2020 02:48:56: 73000000 INFO @ Tue, 30 Jun 2020 02:48:56: 66000000 INFO @ Tue, 30 Jun 2020 02:48:58: 60000000 INFO @ Tue, 30 Jun 2020 02:49:00: 74000000 INFO @ Tue, 30 Jun 2020 02:49:01: 67000000 INFO @ Tue, 30 Jun 2020 02:49:02: 61000000 INFO @ Tue, 30 Jun 2020 02:49:05: 75000000 INFO @ Tue, 30 Jun 2020 02:49:06: 68000000 INFO @ Tue, 30 Jun 2020 02:49:07: 62000000 INFO @ Tue, 30 Jun 2020 02:49:10: 76000000 INFO @ Tue, 30 Jun 2020 02:49:10: 69000000 INFO @ Tue, 30 Jun 2020 02:49:12: 63000000 INFO @ Tue, 30 Jun 2020 02:49:14: 77000000 INFO @ Tue, 30 Jun 2020 02:49:15: 70000000 INFO @ Tue, 30 Jun 2020 02:49:16: 64000000 INFO @ Tue, 30 Jun 2020 02:49:19: 78000000 INFO @ Tue, 30 Jun 2020 02:49:19: 71000000 INFO @ Tue, 30 Jun 2020 02:49:21: 65000000 INFO @ Tue, 30 Jun 2020 02:49:24: 79000000 INFO @ Tue, 30 Jun 2020 02:49:24: 72000000 INFO @ Tue, 30 Jun 2020 02:49:26: 66000000 INFO @ Tue, 30 Jun 2020 02:49:29: 80000000 INFO @ Tue, 30 Jun 2020 02:49:29: 73000000 INFO @ Tue, 30 Jun 2020 02:49:30: 67000000 INFO @ Tue, 30 Jun 2020 02:49:33: 81000000 INFO @ Tue, 30 Jun 2020 02:49:33: 74000000 INFO @ Tue, 30 Jun 2020 02:49:35: 68000000 INFO @ Tue, 30 Jun 2020 02:49:38: 82000000 INFO @ Tue, 30 Jun 2020 02:49:38: 75000000 INFO @ Tue, 30 Jun 2020 02:49:39: 69000000 INFO @ Tue, 30 Jun 2020 02:49:43: 83000000 INFO @ Tue, 30 Jun 2020 02:49:43: 76000000 INFO @ Tue, 30 Jun 2020 02:49:44: 70000000 INFO @ Tue, 30 Jun 2020 02:49:47: 84000000 INFO @ Tue, 30 Jun 2020 02:49:47: 77000000 INFO @ Tue, 30 Jun 2020 02:49:49: 71000000 INFO @ Tue, 30 Jun 2020 02:49:52: 85000000 INFO @ Tue, 30 Jun 2020 02:49:52: 78000000 INFO @ Tue, 30 Jun 2020 02:49:53: 72000000 INFO @ Tue, 30 Jun 2020 02:49:56: 86000000 INFO @ Tue, 30 Jun 2020 02:49:57: 79000000 INFO @ Tue, 30 Jun 2020 02:49:58: 73000000 INFO @ Tue, 30 Jun 2020 02:50:01: 87000000 INFO @ Tue, 30 Jun 2020 02:50:01: 80000000 INFO @ Tue, 30 Jun 2020 02:50:03: 74000000 INFO @ Tue, 30 Jun 2020 02:50:06: 88000000 INFO @ Tue, 30 Jun 2020 02:50:06: 81000000 INFO @ Tue, 30 Jun 2020 02:50:07: 75000000 INFO @ Tue, 30 Jun 2020 02:50:10: 89000000 INFO @ Tue, 30 Jun 2020 02:50:11: 82000000 INFO @ Tue, 30 Jun 2020 02:50:12: 76000000 INFO @ Tue, 30 Jun 2020 02:50:15: 90000000 INFO @ Tue, 30 Jun 2020 02:50:15: 83000000 INFO @ Tue, 30 Jun 2020 02:50:17: 77000000 INFO @ Tue, 30 Jun 2020 02:50:20: 91000000 INFO @ Tue, 30 Jun 2020 02:50:20: 84000000 INFO @ Tue, 30 Jun 2020 02:50:21: 78000000 INFO @ Tue, 30 Jun 2020 02:50:24: 92000000 INFO @ Tue, 30 Jun 2020 02:50:25: 85000000 INFO @ Tue, 30 Jun 2020 02:50:26: 79000000 INFO @ Tue, 30 Jun 2020 02:50:29: 93000000 INFO @ Tue, 30 Jun 2020 02:50:29: 86000000 INFO @ Tue, 30 Jun 2020 02:50:31: 80000000 INFO @ Tue, 30 Jun 2020 02:50:33: 94000000 INFO @ Tue, 30 Jun 2020 02:50:34: 87000000 INFO @ Tue, 30 Jun 2020 02:50:35: 81000000 INFO @ Tue, 30 Jun 2020 02:50:38: 95000000 INFO @ Tue, 30 Jun 2020 02:50:38: 88000000 INFO @ Tue, 30 Jun 2020 02:50:40: 82000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 30 Jun 2020 02:50:43: 96000000 INFO @ Tue, 30 Jun 2020 02:50:43: 89000000 INFO @ Tue, 30 Jun 2020 02:50:45: 83000000 INFO @ Tue, 30 Jun 2020 02:50:47: 97000000 INFO @ Tue, 30 Jun 2020 02:50:48: 90000000 INFO @ Tue, 30 Jun 2020 02:50:49: 84000000 INFO @ Tue, 30 Jun 2020 02:50:52: 98000000 INFO @ Tue, 30 Jun 2020 02:50:52: 91000000 INFO @ Tue, 30 Jun 2020 02:50:54: 85000000 INFO @ Tue, 30 Jun 2020 02:50:57: 99000000 INFO @ Tue, 30 Jun 2020 02:50:57: 92000000 INFO @ Tue, 30 Jun 2020 02:50:58: 86000000 INFO @ Tue, 30 Jun 2020 02:51:01: 100000000 INFO @ Tue, 30 Jun 2020 02:51:01: 93000000 INFO @ Tue, 30 Jun 2020 02:51:03: 87000000 INFO @ Tue, 30 Jun 2020 02:51:06: 94000000 INFO @ Tue, 30 Jun 2020 02:51:06: 101000000 INFO @ Tue, 30 Jun 2020 02:51:08: 88000000 INFO @ Tue, 30 Jun 2020 02:51:11: 95000000 INFO @ Tue, 30 Jun 2020 02:51:11: 102000000 INFO @ Tue, 30 Jun 2020 02:51:12: 89000000 INFO @ Tue, 30 Jun 2020 02:51:15: 103000000 INFO @ Tue, 30 Jun 2020 02:51:15: 96000000 INFO @ Tue, 30 Jun 2020 02:51:17: 90000000 INFO @ Tue, 30 Jun 2020 02:51:20: 104000000 INFO @ Tue, 30 Jun 2020 02:51:20: 97000000 INFO @ Tue, 30 Jun 2020 02:51:21: 91000000 INFO @ Tue, 30 Jun 2020 02:51:25: 105000000 INFO @ Tue, 30 Jun 2020 02:51:25: 98000000 INFO @ Tue, 30 Jun 2020 02:51:26: 92000000 INFO @ Tue, 30 Jun 2020 02:51:29: 106000000 INFO @ Tue, 30 Jun 2020 02:51:30: 99000000 INFO @ Tue, 30 Jun 2020 02:51:30: 93000000 INFO @ Tue, 30 Jun 2020 02:51:34: 107000000 INFO @ Tue, 30 Jun 2020 02:51:34: 100000000 INFO @ Tue, 30 Jun 2020 02:51:35: 94000000 INFO @ Tue, 30 Jun 2020 02:51:38: 108000000 INFO @ Tue, 30 Jun 2020 02:51:39: 101000000 INFO @ Tue, 30 Jun 2020 02:51:40: 95000000 INFO @ Tue, 30 Jun 2020 02:51:43: 109000000 INFO @ Tue, 30 Jun 2020 02:51:44: 102000000 INFO @ Tue, 30 Jun 2020 02:51:44: 96000000 INFO @ Tue, 30 Jun 2020 02:51:48: 110000000 INFO @ Tue, 30 Jun 2020 02:51:48: 103000000 INFO @ Tue, 30 Jun 2020 02:51:49: 97000000 INFO @ Tue, 30 Jun 2020 02:51:52: 111000000 INFO @ Tue, 30 Jun 2020 02:51:53: 104000000 INFO @ Tue, 30 Jun 2020 02:51:54: 98000000 INFO @ Tue, 30 Jun 2020 02:51:57: 112000000 INFO @ Tue, 30 Jun 2020 02:51:58: 105000000 INFO @ Tue, 30 Jun 2020 02:51:59: 99000000 INFO @ Tue, 30 Jun 2020 02:52:02: 113000000 INFO @ Tue, 30 Jun 2020 02:52:02: 106000000 INFO @ Tue, 30 Jun 2020 02:52:03: 100000000 INFO @ Tue, 30 Jun 2020 02:52:06: 114000000 INFO @ Tue, 30 Jun 2020 02:52:07: 107000000 INFO @ Tue, 30 Jun 2020 02:52:08: 101000000 INFO @ Tue, 30 Jun 2020 02:52:11: 115000000 INFO @ Tue, 30 Jun 2020 02:52:11: 108000000 INFO @ Tue, 30 Jun 2020 02:52:13: 102000000 INFO @ Tue, 30 Jun 2020 02:52:16: 116000000 INFO @ Tue, 30 Jun 2020 02:52:16: 109000000 INFO @ Tue, 30 Jun 2020 02:52:17: 103000000 INFO @ Tue, 30 Jun 2020 02:52:20: 117000000 INFO @ Tue, 30 Jun 2020 02:52:21: 110000000 INFO @ Tue, 30 Jun 2020 02:52:22: 104000000 INFO @ Tue, 30 Jun 2020 02:52:25: 118000000 INFO @ Tue, 30 Jun 2020 02:52:25: 111000000 BigWig に変換しました。 INFO @ Tue, 30 Jun 2020 02:52:27: 105000000 INFO @ Tue, 30 Jun 2020 02:52:30: 119000000 INFO @ Tue, 30 Jun 2020 02:52:30: 112000000 INFO @ Tue, 30 Jun 2020 02:52:31: 106000000 INFO @ Tue, 30 Jun 2020 02:52:34: 120000000 INFO @ Tue, 30 Jun 2020 02:52:35: 113000000 INFO @ Tue, 30 Jun 2020 02:52:36: 107000000 INFO @ Tue, 30 Jun 2020 02:52:39: 121000000 INFO @ Tue, 30 Jun 2020 02:52:39: 114000000 INFO @ Tue, 30 Jun 2020 02:52:40: 108000000 INFO @ Tue, 30 Jun 2020 02:52:43: #1 tag size is determined as 49 bps INFO @ Tue, 30 Jun 2020 02:52:43: #1 tag size = 49 INFO @ Tue, 30 Jun 2020 02:52:43: #1 total tags in treatment: 59660446 INFO @ Tue, 30 Jun 2020 02:52:43: #1 user defined the maximum tags... INFO @ Tue, 30 Jun 2020 02:52:43: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 30 Jun 2020 02:52:44: #1 tags after filtering in treatment: 42621427 INFO @ Tue, 30 Jun 2020 02:52:44: #1 Redundant rate of treatment: 0.29 INFO @ Tue, 30 Jun 2020 02:52:44: #1 finished! INFO @ Tue, 30 Jun 2020 02:52:44: #2 Build Peak Model... INFO @ Tue, 30 Jun 2020 02:52:44: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 30 Jun 2020 02:52:44: 115000000 INFO @ Tue, 30 Jun 2020 02:52:45: 109000000 INFO @ Tue, 30 Jun 2020 02:52:46: #2 number of paired peaks: 114 WARNING @ Tue, 30 Jun 2020 02:52:46: Fewer paired peaks (114) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 114 pairs to build model! INFO @ Tue, 30 Jun 2020 02:52:46: start model_add_line... INFO @ Tue, 30 Jun 2020 02:52:46: start X-correlation... INFO @ Tue, 30 Jun 2020 02:52:46: end of X-cor INFO @ Tue, 30 Jun 2020 02:52:46: #2 finished! INFO @ Tue, 30 Jun 2020 02:52:46: #2 predicted fragment length is 136 bps INFO @ Tue, 30 Jun 2020 02:52:46: #2 alternative fragment length(s) may be 1,47,136,153,216,245,259,550 bps INFO @ Tue, 30 Jun 2020 02:52:46: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX5416198/SRX5416198.05_model.r INFO @ Tue, 30 Jun 2020 02:52:46: #3 Call peaks... INFO @ Tue, 30 Jun 2020 02:52:46: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 30 Jun 2020 02:52:49: 116000000 INFO @ Tue, 30 Jun 2020 02:52:50: 110000000 INFO @ Tue, 30 Jun 2020 02:52:54: 117000000 INFO @ Tue, 30 Jun 2020 02:52:54: 111000000 INFO @ Tue, 30 Jun 2020 02:52:58: 118000000 INFO @ Tue, 30 Jun 2020 02:52:59: 112000000 INFO @ Tue, 30 Jun 2020 02:53:03: 119000000 INFO @ Tue, 30 Jun 2020 02:53:04: 113000000 INFO @ Tue, 30 Jun 2020 02:53:07: 120000000 INFO @ Tue, 30 Jun 2020 02:53:08: 114000000 INFO @ Tue, 30 Jun 2020 02:53:12: 121000000 INFO @ Tue, 30 Jun 2020 02:53:13: 115000000 INFO @ Tue, 30 Jun 2020 02:53:15: #1 tag size is determined as 49 bps INFO @ Tue, 30 Jun 2020 02:53:16: #1 tag size = 49 INFO @ Tue, 30 Jun 2020 02:53:16: #1 total tags in treatment: 59660446 INFO @ Tue, 30 Jun 2020 02:53:16: #1 user defined the maximum tags... INFO @ Tue, 30 Jun 2020 02:53:16: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 30 Jun 2020 02:53:17: #1 tags after filtering in treatment: 42621427 INFO @ Tue, 30 Jun 2020 02:53:17: #1 Redundant rate of treatment: 0.29 INFO @ Tue, 30 Jun 2020 02:53:17: #1 finished! INFO @ Tue, 30 Jun 2020 02:53:17: #2 Build Peak Model... INFO @ Tue, 30 Jun 2020 02:53:17: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 30 Jun 2020 02:53:18: 116000000 INFO @ Tue, 30 Jun 2020 02:53:19: #2 number of paired peaks: 114 WARNING @ Tue, 30 Jun 2020 02:53:19: Fewer paired peaks (114) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 114 pairs to build model! INFO @ Tue, 30 Jun 2020 02:53:19: start model_add_line... INFO @ Tue, 30 Jun 2020 02:53:19: start X-correlation... INFO @ Tue, 30 Jun 2020 02:53:19: end of X-cor INFO @ Tue, 30 Jun 2020 02:53:19: #2 finished! INFO @ Tue, 30 Jun 2020 02:53:19: #2 predicted fragment length is 136 bps INFO @ Tue, 30 Jun 2020 02:53:19: #2 alternative fragment length(s) may be 1,47,136,153,216,245,259,550 bps INFO @ Tue, 30 Jun 2020 02:53:19: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX5416198/SRX5416198.10_model.r INFO @ Tue, 30 Jun 2020 02:53:19: #3 Call peaks... INFO @ Tue, 30 Jun 2020 02:53:19: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 30 Jun 2020 02:53:22: 117000000 INFO @ Tue, 30 Jun 2020 02:53:27: 118000000 INFO @ Tue, 30 Jun 2020 02:53:31: 119000000 INFO @ Tue, 30 Jun 2020 02:53:36: 120000000 INFO @ Tue, 30 Jun 2020 02:53:40: 121000000 INFO @ Tue, 30 Jun 2020 02:53:44: #1 tag size is determined as 49 bps INFO @ Tue, 30 Jun 2020 02:53:44: #1 tag size = 49 INFO @ Tue, 30 Jun 2020 02:53:44: #1 total tags in treatment: 59660446 INFO @ Tue, 30 Jun 2020 02:53:44: #1 user defined the maximum tags... INFO @ Tue, 30 Jun 2020 02:53:44: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 30 Jun 2020 02:53:45: #1 tags after filtering in treatment: 42621427 INFO @ Tue, 30 Jun 2020 02:53:45: #1 Redundant rate of treatment: 0.29 INFO @ Tue, 30 Jun 2020 02:53:45: #1 finished! INFO @ Tue, 30 Jun 2020 02:53:45: #2 Build Peak Model... INFO @ Tue, 30 Jun 2020 02:53:45: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 30 Jun 2020 02:53:47: #2 number of paired peaks: 114 WARNING @ Tue, 30 Jun 2020 02:53:47: Fewer paired peaks (114) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 114 pairs to build model! INFO @ Tue, 30 Jun 2020 02:53:47: start model_add_line... INFO @ Tue, 30 Jun 2020 02:53:47: start X-correlation... INFO @ Tue, 30 Jun 2020 02:53:47: end of X-cor INFO @ Tue, 30 Jun 2020 02:53:47: #2 finished! INFO @ Tue, 30 Jun 2020 02:53:47: #2 predicted fragment length is 136 bps INFO @ Tue, 30 Jun 2020 02:53:47: #2 alternative fragment length(s) may be 1,47,136,153,216,245,259,550 bps INFO @ Tue, 30 Jun 2020 02:53:47: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX5416198/SRX5416198.20_model.r INFO @ Tue, 30 Jun 2020 02:53:47: #3 Call peaks... INFO @ Tue, 30 Jun 2020 02:53:47: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 30 Jun 2020 02:54:03: #3 Call peaks for each chromosome... INFO @ Tue, 30 Jun 2020 02:54:37: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX5416198/SRX5416198.05_peaks.xls INFO @ Tue, 30 Jun 2020 02:54:37: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX5416198/SRX5416198.05_peaks.narrowPeak INFO @ Tue, 30 Jun 2020 02:54:37: #3 Call peaks for each chromosome... INFO @ Tue, 30 Jun 2020 02:54:37: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX5416198/SRX5416198.05_summits.bed INFO @ Tue, 30 Jun 2020 02:54:37: Done! pass1 - making usageList (15 chroms): 2 millis pass2 - checking and writing primary data (10435 records, 4 fields): 10 millis CompletedMACS2peakCalling INFO @ Tue, 30 Jun 2020 02:55:04: #3 Call peaks for each chromosome... INFO @ Tue, 30 Jun 2020 02:55:11: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX5416198/SRX5416198.10_peaks.xls INFO @ Tue, 30 Jun 2020 02:55:11: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX5416198/SRX5416198.10_peaks.narrowPeak INFO @ Tue, 30 Jun 2020 02:55:11: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX5416198/SRX5416198.10_summits.bed INFO @ Tue, 30 Jun 2020 02:55:11: Done! pass1 - making usageList (15 chroms): 1 millis pass2 - checking and writing primary data (6679 records, 4 fields): 8 millis CompletedMACS2peakCalling INFO @ Tue, 30 Jun 2020 02:55:38: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX5416198/SRX5416198.20_peaks.xls INFO @ Tue, 30 Jun 2020 02:55:38: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX5416198/SRX5416198.20_peaks.narrowPeak INFO @ Tue, 30 Jun 2020 02:55:38: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX5416198/SRX5416198.20_summits.bed INFO @ Tue, 30 Jun 2020 02:55:38: Done! pass1 - making usageList (15 chroms): 1 millis pass2 - checking and writing primary data (2657 records, 4 fields): 4 millis CompletedMACS2peakCalling