Job ID = 1299946 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2019-06-03T09:35:58 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-06-03T09:38:10 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-06-03T09:38:10 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-06-03T09:40:40 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-06-03T09:42:04 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-06-03T09:42:04 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-06-03T09:42:04 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-06-03T09:42:54 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-06-03T09:46:31 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-06-03T09:46:31 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-06-03T09:46:49 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-06-03T09:46:49 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-06-03T09:51:12 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-06-03T10:00:11 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-06-03T10:00:11 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) spots read : 22,246,363 reads read : 44,492,726 reads written : 44,492,726 rm: cannot remove ‘[DSE]RR*’: No such file or directory rm: cannot remove ‘fastqDump_tmp*’: No such file or directory fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:04:10 22246363 reads; of these: 22246363 (100.00%) were paired; of these: 1968887 (8.85%) aligned concordantly 0 times 13799712 (62.03%) aligned concordantly exactly 1 time 6477764 (29.12%) aligned concordantly >1 times ---- 1968887 pairs aligned concordantly 0 times; of these: 187940 (9.55%) aligned discordantly 1 time ---- 1780947 pairs aligned 0 times concordantly or discordantly; of these: 3561894 mates make up the pairs; of these: 2822482 (79.24%) aligned 0 times 451690 (12.68%) aligned exactly 1 time 287722 (8.08%) aligned >1 times 93.66% overall alignment rate Time searching: 01:04:10 Overall time: 01:04:10 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 20 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 3628175 / 20424047 = 0.1776 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Mon, 03 Jun 2019 20:19:18: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX474614/SRX474614.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX474614/SRX474614.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX474614/SRX474614.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX474614/SRX474614.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Mon, 03 Jun 2019 20:19:18: #1 read tag files... INFO @ Mon, 03 Jun 2019 20:19:18: #1 read treatment tags... INFO @ Mon, 03 Jun 2019 20:19:18: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX474614/SRX474614.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX474614/SRX474614.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX474614/SRX474614.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX474614/SRX474614.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Mon, 03 Jun 2019 20:19:18: #1 read tag files... INFO @ Mon, 03 Jun 2019 20:19:18: #1 read treatment tags... INFO @ Mon, 03 Jun 2019 20:19:18: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX474614/SRX474614.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX474614/SRX474614.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX474614/SRX474614.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX474614/SRX474614.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Mon, 03 Jun 2019 20:19:18: #1 read tag files... INFO @ Mon, 03 Jun 2019 20:19:18: #1 read treatment tags... INFO @ Mon, 03 Jun 2019 20:19:27: 1000000 INFO @ Mon, 03 Jun 2019 20:19:27: 1000000 INFO @ Mon, 03 Jun 2019 20:19:27: 1000000 INFO @ Mon, 03 Jun 2019 20:19:36: 2000000 INFO @ Mon, 03 Jun 2019 20:19:37: 2000000 INFO @ Mon, 03 Jun 2019 20:19:37: 2000000 INFO @ Mon, 03 Jun 2019 20:19:45: 3000000 INFO @ Mon, 03 Jun 2019 20:19:46: 3000000 INFO @ Mon, 03 Jun 2019 20:19:47: 3000000 INFO @ Mon, 03 Jun 2019 20:19:54: 4000000 INFO @ Mon, 03 Jun 2019 20:19:55: 4000000 INFO @ Mon, 03 Jun 2019 20:19:57: 4000000 INFO @ Mon, 03 Jun 2019 20:20:02: 5000000 INFO @ Mon, 03 Jun 2019 20:20:04: 5000000 INFO @ Mon, 03 Jun 2019 20:20:07: 5000000 INFO @ Mon, 03 Jun 2019 20:20:11: 6000000 INFO @ Mon, 03 Jun 2019 20:20:13: 6000000 INFO @ Mon, 03 Jun 2019 20:20:16: 6000000 INFO @ Mon, 03 Jun 2019 20:20:19: 7000000 INFO @ Mon, 03 Jun 2019 20:20:21: 7000000 INFO @ Mon, 03 Jun 2019 20:20:26: 7000000 INFO @ Mon, 03 Jun 2019 20:20:28: 8000000 INFO @ Mon, 03 Jun 2019 20:20:30: 8000000 INFO @ Mon, 03 Jun 2019 20:20:35: 8000000 INFO @ Mon, 03 Jun 2019 20:20:36: 9000000 INFO @ Mon, 03 Jun 2019 20:20:40: 9000000 INFO @ Mon, 03 Jun 2019 20:20:44: 10000000 INFO @ Mon, 03 Jun 2019 20:20:45: 9000000 INFO @ Mon, 03 Jun 2019 20:20:48: 10000000 INFO @ Mon, 03 Jun 2019 20:20:53: 11000000 INFO @ Mon, 03 Jun 2019 20:20:54: 10000000 INFO @ Mon, 03 Jun 2019 20:20:57: 11000000 INFO @ Mon, 03 Jun 2019 20:21:01: 12000000 INFO @ Mon, 03 Jun 2019 20:21:04: 11000000 INFO @ Mon, 03 Jun 2019 20:21:06: 12000000 INFO @ Mon, 03 Jun 2019 20:21:10: 13000000 INFO @ Mon, 03 Jun 2019 20:21:14: 12000000 INFO @ Mon, 03 Jun 2019 20:21:15: 13000000 INFO @ Mon, 03 Jun 2019 20:21:18: 14000000 INFO @ Mon, 03 Jun 2019 20:21:23: 13000000 INFO @ Mon, 03 Jun 2019 20:21:23: 14000000 INFO @ Mon, 03 Jun 2019 20:21:26: 15000000 INFO @ Mon, 03 Jun 2019 20:21:32: 15000000 INFO @ Mon, 03 Jun 2019 20:21:33: 14000000 INFO @ Mon, 03 Jun 2019 20:21:35: 16000000 INFO @ Mon, 03 Jun 2019 20:21:41: 16000000 INFO @ Mon, 03 Jun 2019 20:21:42: 15000000 INFO @ Mon, 03 Jun 2019 20:21:43: 17000000 INFO @ Mon, 03 Jun 2019 20:21:49: 17000000 INFO @ Mon, 03 Jun 2019 20:21:51: 16000000 INFO @ Mon, 03 Jun 2019 20:21:52: 18000000 INFO @ Mon, 03 Jun 2019 20:21:58: 18000000 INFO @ Mon, 03 Jun 2019 20:22:00: 19000000 INFO @ Mon, 03 Jun 2019 20:22:01: 17000000 INFO @ Mon, 03 Jun 2019 20:22:07: 19000000 INFO @ Mon, 03 Jun 2019 20:22:08: 20000000 INFO @ Mon, 03 Jun 2019 20:22:10: 18000000 INFO @ Mon, 03 Jun 2019 20:22:16: 20000000 INFO @ Mon, 03 Jun 2019 20:22:17: 21000000 INFO @ Mon, 03 Jun 2019 20:22:20: 19000000 INFO @ Mon, 03 Jun 2019 20:22:25: 22000000 INFO @ Mon, 03 Jun 2019 20:22:25: 21000000 INFO @ Mon, 03 Jun 2019 20:22:29: 20000000 INFO @ Mon, 03 Jun 2019 20:22:33: 23000000 INFO @ Mon, 03 Jun 2019 20:22:33: 22000000 INFO @ Mon, 03 Jun 2019 20:22:39: 21000000 INFO @ Mon, 03 Jun 2019 20:22:41: 24000000 INFO @ Mon, 03 Jun 2019 20:22:42: 23000000 INFO @ Mon, 03 Jun 2019 20:22:48: 22000000 INFO @ Mon, 03 Jun 2019 20:22:49: 25000000 INFO @ Mon, 03 Jun 2019 20:22:50: 24000000 INFO @ Mon, 03 Jun 2019 20:22:57: 26000000 INFO @ Mon, 03 Jun 2019 20:22:57: 23000000 INFO @ Mon, 03 Jun 2019 20:22:58: 25000000 INFO @ Mon, 03 Jun 2019 20:23:05: 27000000 INFO @ Mon, 03 Jun 2019 20:23:06: 24000000 INFO @ Mon, 03 Jun 2019 20:23:06: 26000000 INFO @ Mon, 03 Jun 2019 20:23:13: 28000000 INFO @ Mon, 03 Jun 2019 20:23:14: 27000000 INFO @ Mon, 03 Jun 2019 20:23:15: 25000000 INFO @ Mon, 03 Jun 2019 20:23:21: 29000000 INFO @ Mon, 03 Jun 2019 20:23:23: 28000000 INFO @ Mon, 03 Jun 2019 20:23:24: 26000000 INFO @ Mon, 03 Jun 2019 20:23:30: 30000000 INFO @ Mon, 03 Jun 2019 20:23:33: 29000000 INFO @ Mon, 03 Jun 2019 20:23:33: 27000000 INFO @ Mon, 03 Jun 2019 20:23:38: 31000000 INFO @ Mon, 03 Jun 2019 20:23:42: 30000000 INFO @ Mon, 03 Jun 2019 20:23:43: 28000000 INFO @ Mon, 03 Jun 2019 20:23:47: 32000000 INFO @ Mon, 03 Jun 2019 20:23:51: 31000000 INFO @ Mon, 03 Jun 2019 20:23:52: 29000000 INFO @ Mon, 03 Jun 2019 20:23:56: 33000000 INFO @ Mon, 03 Jun 2019 20:24:00: 32000000 INFO @ Mon, 03 Jun 2019 20:24:02: 30000000 INFO @ Mon, 03 Jun 2019 20:24:04: 34000000 INFO @ Mon, 03 Jun 2019 20:24:07: #1 tag size is determined as 50 bps INFO @ Mon, 03 Jun 2019 20:24:07: #1 tag size = 50 INFO @ Mon, 03 Jun 2019 20:24:07: #1 total tags in treatment: 16662708 INFO @ Mon, 03 Jun 2019 20:24:07: #1 user defined the maximum tags... INFO @ Mon, 03 Jun 2019 20:24:07: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Mon, 03 Jun 2019 20:24:08: #1 tags after filtering in treatment: 15321403 INFO @ Mon, 03 Jun 2019 20:24:08: #1 Redundant rate of treatment: 0.08 INFO @ Mon, 03 Jun 2019 20:24:08: #1 finished! INFO @ Mon, 03 Jun 2019 20:24:08: #2 Build Peak Model... INFO @ Mon, 03 Jun 2019 20:24:08: #2 looking for paired plus/minus strand peaks... INFO @ Mon, 03 Jun 2019 20:24:08: 33000000 INFO @ Mon, 03 Jun 2019 20:24:10: #2 number of paired peaks: 289 WARNING @ Mon, 03 Jun 2019 20:24:10: Fewer paired peaks (289) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 289 pairs to build model! INFO @ Mon, 03 Jun 2019 20:24:10: start model_add_line... INFO @ Mon, 03 Jun 2019 20:24:10: start X-correlation... INFO @ Mon, 03 Jun 2019 20:24:10: end of X-cor INFO @ Mon, 03 Jun 2019 20:24:10: #2 finished! INFO @ Mon, 03 Jun 2019 20:24:10: #2 predicted fragment length is 89 bps INFO @ Mon, 03 Jun 2019 20:24:10: #2 alternative fragment length(s) may be 89 bps INFO @ Mon, 03 Jun 2019 20:24:10: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX474614/SRX474614.20_model.r WARNING @ Mon, 03 Jun 2019 20:24:10: #2 Since the d (89) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Mon, 03 Jun 2019 20:24:10: #2 You may need to consider one of the other alternative d(s): 89 WARNING @ Mon, 03 Jun 2019 20:24:10: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Mon, 03 Jun 2019 20:24:10: #3 Call peaks... INFO @ Mon, 03 Jun 2019 20:24:10: #3 Pre-compute pvalue-qvalue table... INFO @ Mon, 03 Jun 2019 20:24:11: 31000000 INFO @ Mon, 03 Jun 2019 20:24:17: 34000000 INFO @ Mon, 03 Jun 2019 20:24:20: #1 tag size is determined as 50 bps INFO @ Mon, 03 Jun 2019 20:24:20: #1 tag size = 50 INFO @ Mon, 03 Jun 2019 20:24:20: #1 total tags in treatment: 16662708 INFO @ Mon, 03 Jun 2019 20:24:20: #1 user defined the maximum tags... INFO @ Mon, 03 Jun 2019 20:24:20: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Mon, 03 Jun 2019 20:24:21: 32000000 INFO @ Mon, 03 Jun 2019 20:24:21: #1 tags after filtering in treatment: 15321403 INFO @ Mon, 03 Jun 2019 20:24:21: #1 Redundant rate of treatment: 0.08 INFO @ Mon, 03 Jun 2019 20:24:21: #1 finished! INFO @ Mon, 03 Jun 2019 20:24:21: #2 Build Peak Model... INFO @ Mon, 03 Jun 2019 20:24:21: #2 looking for paired plus/minus strand peaks... INFO @ Mon, 03 Jun 2019 20:24:23: #2 number of paired peaks: 289 WARNING @ Mon, 03 Jun 2019 20:24:23: Fewer paired peaks (289) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 289 pairs to build model! INFO @ Mon, 03 Jun 2019 20:24:23: start model_add_line... INFO @ Mon, 03 Jun 2019 20:24:23: start X-correlation... INFO @ Mon, 03 Jun 2019 20:24:23: end of X-cor INFO @ Mon, 03 Jun 2019 20:24:23: #2 finished! INFO @ Mon, 03 Jun 2019 20:24:23: #2 predicted fragment length is 89 bps INFO @ Mon, 03 Jun 2019 20:24:23: #2 alternative fragment length(s) may be 89 bps INFO @ Mon, 03 Jun 2019 20:24:23: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX474614/SRX474614.05_model.r WARNING @ Mon, 03 Jun 2019 20:24:23: #2 Since the d (89) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Mon, 03 Jun 2019 20:24:23: #2 You may need to consider one of the other alternative d(s): 89 WARNING @ Mon, 03 Jun 2019 20:24:23: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Mon, 03 Jun 2019 20:24:23: #3 Call peaks... INFO @ Mon, 03 Jun 2019 20:24:23: #3 Pre-compute pvalue-qvalue table... INFO @ Mon, 03 Jun 2019 20:24:30: 33000000 INFO @ Mon, 03 Jun 2019 20:24:39: 34000000 INFO @ Mon, 03 Jun 2019 20:24:42: #1 tag size is determined as 50 bps INFO @ Mon, 03 Jun 2019 20:24:42: #1 tag size = 50 INFO @ Mon, 03 Jun 2019 20:24:42: #1 total tags in treatment: 16662708 INFO @ Mon, 03 Jun 2019 20:24:42: #1 user defined the maximum tags... INFO @ Mon, 03 Jun 2019 20:24:42: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Mon, 03 Jun 2019 20:24:43: #1 tags after filtering in treatment: 15321403 INFO @ Mon, 03 Jun 2019 20:24:43: #1 Redundant rate of treatment: 0.08 INFO @ Mon, 03 Jun 2019 20:24:43: #1 finished! INFO @ Mon, 03 Jun 2019 20:24:43: #2 Build Peak Model... INFO @ Mon, 03 Jun 2019 20:24:43: #2 looking for paired plus/minus strand peaks... INFO @ Mon, 03 Jun 2019 20:24:45: #2 number of paired peaks: 289 WARNING @ Mon, 03 Jun 2019 20:24:45: Fewer paired peaks (289) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 289 pairs to build model! INFO @ Mon, 03 Jun 2019 20:24:45: start model_add_line... INFO @ Mon, 03 Jun 2019 20:24:45: start X-correlation... INFO @ Mon, 03 Jun 2019 20:24:45: end of X-cor INFO @ Mon, 03 Jun 2019 20:24:45: #2 finished! INFO @ Mon, 03 Jun 2019 20:24:45: #2 predicted fragment length is 89 bps INFO @ Mon, 03 Jun 2019 20:24:45: #2 alternative fragment length(s) may be 89 bps INFO @ Mon, 03 Jun 2019 20:24:45: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX474614/SRX474614.10_model.r WARNING @ Mon, 03 Jun 2019 20:24:45: #2 Since the d (89) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Mon, 03 Jun 2019 20:24:45: #2 You may need to consider one of the other alternative d(s): 89 WARNING @ Mon, 03 Jun 2019 20:24:45: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Mon, 03 Jun 2019 20:24:45: #3 Call peaks... INFO @ Mon, 03 Jun 2019 20:24:45: #3 Pre-compute pvalue-qvalue table... INFO @ Mon, 03 Jun 2019 20:24:54: #3 Call peaks for each chromosome... INFO @ Mon, 03 Jun 2019 20:25:07: #3 Call peaks for each chromosome... INFO @ Mon, 03 Jun 2019 20:25:17: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX474614/SRX474614.20_peaks.xls INFO @ Mon, 03 Jun 2019 20:25:17: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX474614/SRX474614.20_peaks.narrowPeak INFO @ Mon, 03 Jun 2019 20:25:17: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX474614/SRX474614.20_summits.bed INFO @ Mon, 03 Jun 2019 20:25:17: Done! pass1 - making usageList (8 chroms): 1 millis pass2 - checking and writing primary data (856 records, 4 fields): 4 millis CompletedMACS2peakCalling INFO @ Mon, 03 Jun 2019 20:25:29: #3 Call peaks for each chromosome... INFO @ Mon, 03 Jun 2019 20:25:30: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX474614/SRX474614.05_peaks.xls INFO @ Mon, 03 Jun 2019 20:25:30: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX474614/SRX474614.05_peaks.narrowPeak INFO @ Mon, 03 Jun 2019 20:25:30: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX474614/SRX474614.05_summits.bed INFO @ Mon, 03 Jun 2019 20:25:30: Done! pass1 - making usageList (14 chroms): 1 millis pass2 - checking and writing primary data (1582 records, 4 fields): 7 millis CompletedMACS2peakCalling INFO @ Mon, 03 Jun 2019 20:25:52: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX474614/SRX474614.10_peaks.xls INFO @ Mon, 03 Jun 2019 20:25:52: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX474614/SRX474614.10_peaks.narrowPeak INFO @ Mon, 03 Jun 2019 20:25:52: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX474614/SRX474614.10_summits.bed INFO @ Mon, 03 Jun 2019 20:25:52: Done! pass1 - making usageList (13 chroms): 1 millis pass2 - checking and writing primary data (1152 records, 4 fields): 5 millis CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。