Job ID = 12265254 SRX = SRX4664633 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 37093494 spots for SRR7813060/SRR7813060.sra Written 37093494 spots for SRR7813060/SRR7813060.sra fastq に変換しました。 bowtie でマッピング中... Your job 12265671 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:13:51 37093494 reads; of these: 37093494 (100.00%) were paired; of these: 10498162 (28.30%) aligned concordantly 0 times 11627786 (31.35%) aligned concordantly exactly 1 time 14967546 (40.35%) aligned concordantly >1 times ---- 10498162 pairs aligned concordantly 0 times; of these: 3211231 (30.59%) aligned discordantly 1 time ---- 7286931 pairs aligned 0 times concordantly or discordantly; of these: 14573862 mates make up the pairs; of these: 8844380 (60.69%) aligned 0 times 1196087 (8.21%) aligned exactly 1 time 4533395 (31.11%) aligned >1 times 88.08% overall alignment rate Time searching: 01:13:51 Overall time: 01:13:51 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 28 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 10903144 / 29327263 = 0.3718 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 07:52:41: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX4664633/SRX4664633.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX4664633/SRX4664633.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX4664633/SRX4664633.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX4664633/SRX4664633.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 07:52:41: #1 read tag files... INFO @ Sat, 03 Apr 2021 07:52:41: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 07:52:47: 1000000 INFO @ Sat, 03 Apr 2021 07:52:54: 2000000 INFO @ Sat, 03 Apr 2021 07:53:00: 3000000 INFO @ Sat, 03 Apr 2021 07:53:07: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 07:53:11: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX4664633/SRX4664633.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX4664633/SRX4664633.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX4664633/SRX4664633.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX4664633/SRX4664633.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 07:53:11: #1 read tag files... INFO @ Sat, 03 Apr 2021 07:53:11: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 07:53:13: 5000000 INFO @ Sat, 03 Apr 2021 07:53:18: 1000000 INFO @ Sat, 03 Apr 2021 07:53:21: 6000000 INFO @ Sat, 03 Apr 2021 07:53:25: 2000000 INFO @ Sat, 03 Apr 2021 07:53:28: 7000000 INFO @ Sat, 03 Apr 2021 07:53:32: 3000000 INFO @ Sat, 03 Apr 2021 07:53:35: 8000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 07:53:39: 4000000 INFO @ Sat, 03 Apr 2021 07:53:41: 9000000 INFO @ Sat, 03 Apr 2021 07:53:42: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX4664633/SRX4664633.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX4664633/SRX4664633.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX4664633/SRX4664633.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX4664633/SRX4664633.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 07:53:42: #1 read tag files... INFO @ Sat, 03 Apr 2021 07:53:42: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 07:53:46: 5000000 INFO @ Sat, 03 Apr 2021 07:53:48: 10000000 INFO @ Sat, 03 Apr 2021 07:53:49: 1000000 INFO @ Sat, 03 Apr 2021 07:53:52: 6000000 INFO @ Sat, 03 Apr 2021 07:53:54: 11000000 INFO @ Sat, 03 Apr 2021 07:53:56: 2000000 INFO @ Sat, 03 Apr 2021 07:53:59: 7000000 INFO @ Sat, 03 Apr 2021 07:54:01: 12000000 INFO @ Sat, 03 Apr 2021 07:54:02: 3000000 INFO @ Sat, 03 Apr 2021 07:54:06: 8000000 INFO @ Sat, 03 Apr 2021 07:54:07: 13000000 INFO @ Sat, 03 Apr 2021 07:54:09: 4000000 INFO @ Sat, 03 Apr 2021 07:54:12: 9000000 INFO @ Sat, 03 Apr 2021 07:54:13: 14000000 INFO @ Sat, 03 Apr 2021 07:54:16: 5000000 INFO @ Sat, 03 Apr 2021 07:54:19: 10000000 INFO @ Sat, 03 Apr 2021 07:54:20: 15000000 INFO @ Sat, 03 Apr 2021 07:54:22: 6000000 INFO @ Sat, 03 Apr 2021 07:54:25: 11000000 INFO @ Sat, 03 Apr 2021 07:54:26: 16000000 INFO @ Sat, 03 Apr 2021 07:54:29: 7000000 INFO @ Sat, 03 Apr 2021 07:54:31: 12000000 INFO @ Sat, 03 Apr 2021 07:54:32: 17000000 INFO @ Sat, 03 Apr 2021 07:54:35: 8000000 INFO @ Sat, 03 Apr 2021 07:54:38: 13000000 INFO @ Sat, 03 Apr 2021 07:54:39: 18000000 INFO @ Sat, 03 Apr 2021 07:54:42: 9000000 INFO @ Sat, 03 Apr 2021 07:54:44: 14000000 INFO @ Sat, 03 Apr 2021 07:54:45: 19000000 INFO @ Sat, 03 Apr 2021 07:54:49: 10000000 INFO @ Sat, 03 Apr 2021 07:54:51: 15000000 INFO @ Sat, 03 Apr 2021 07:54:52: 20000000 INFO @ Sat, 03 Apr 2021 07:54:55: 11000000 INFO @ Sat, 03 Apr 2021 07:54:57: 16000000 INFO @ Sat, 03 Apr 2021 07:54:58: 21000000 INFO @ Sat, 03 Apr 2021 07:55:02: 12000000 INFO @ Sat, 03 Apr 2021 07:55:04: 17000000 INFO @ Sat, 03 Apr 2021 07:55:05: 22000000 INFO @ Sat, 03 Apr 2021 07:55:09: 13000000 INFO @ Sat, 03 Apr 2021 07:55:10: 18000000 INFO @ Sat, 03 Apr 2021 07:55:11: 23000000 INFO @ Sat, 03 Apr 2021 07:55:15: 14000000 INFO @ Sat, 03 Apr 2021 07:55:17: 19000000 INFO @ Sat, 03 Apr 2021 07:55:18: 24000000 INFO @ Sat, 03 Apr 2021 07:55:22: 15000000 INFO @ Sat, 03 Apr 2021 07:55:23: 20000000 INFO @ Sat, 03 Apr 2021 07:55:24: 25000000 INFO @ Sat, 03 Apr 2021 07:55:28: 16000000 INFO @ Sat, 03 Apr 2021 07:55:30: 21000000 INFO @ Sat, 03 Apr 2021 07:55:31: 26000000 INFO @ Sat, 03 Apr 2021 07:55:35: 17000000 INFO @ Sat, 03 Apr 2021 07:55:36: 22000000 INFO @ Sat, 03 Apr 2021 07:55:37: 27000000 INFO @ Sat, 03 Apr 2021 07:55:41: 18000000 INFO @ Sat, 03 Apr 2021 07:55:43: 23000000 INFO @ Sat, 03 Apr 2021 07:55:44: 28000000 INFO @ Sat, 03 Apr 2021 07:55:48: 19000000 INFO @ Sat, 03 Apr 2021 07:55:49: 24000000 INFO @ Sat, 03 Apr 2021 07:55:50: 29000000 INFO @ Sat, 03 Apr 2021 07:55:54: 20000000 INFO @ Sat, 03 Apr 2021 07:55:56: 25000000 INFO @ Sat, 03 Apr 2021 07:55:56: 30000000 INFO @ Sat, 03 Apr 2021 07:56:01: 21000000 INFO @ Sat, 03 Apr 2021 07:56:02: 31000000 INFO @ Sat, 03 Apr 2021 07:56:02: 26000000 INFO @ Sat, 03 Apr 2021 07:56:08: 22000000 INFO @ Sat, 03 Apr 2021 07:56:08: 32000000 INFO @ Sat, 03 Apr 2021 07:56:09: 27000000 INFO @ Sat, 03 Apr 2021 07:56:14: 33000000 INFO @ Sat, 03 Apr 2021 07:56:14: 23000000 INFO @ Sat, 03 Apr 2021 07:56:16: 28000000 INFO @ Sat, 03 Apr 2021 07:56:20: 34000000 INFO @ Sat, 03 Apr 2021 07:56:21: 24000000 INFO @ Sat, 03 Apr 2021 07:56:23: 29000000 INFO @ Sat, 03 Apr 2021 07:56:27: 35000000 INFO @ Sat, 03 Apr 2021 07:56:28: 25000000 INFO @ Sat, 03 Apr 2021 07:56:29: 30000000 INFO @ Sat, 03 Apr 2021 07:56:33: 36000000 INFO @ Sat, 03 Apr 2021 07:56:34: 26000000 INFO @ Sat, 03 Apr 2021 07:56:36: 31000000 INFO @ Sat, 03 Apr 2021 07:56:40: 37000000 INFO @ Sat, 03 Apr 2021 07:56:42: 32000000 INFO @ Sat, 03 Apr 2021 07:56:42: 27000000 INFO @ Sat, 03 Apr 2021 07:56:46: 38000000 INFO @ Sat, 03 Apr 2021 07:56:48: 33000000 INFO @ Sat, 03 Apr 2021 07:56:49: 28000000 INFO @ Sat, 03 Apr 2021 07:56:53: 39000000 INFO @ Sat, 03 Apr 2021 07:56:54: 34000000 INFO @ Sat, 03 Apr 2021 07:56:55: 29000000 INFO @ Sat, 03 Apr 2021 07:56:59: 40000000 INFO @ Sat, 03 Apr 2021 07:57:01: 35000000 INFO @ Sat, 03 Apr 2021 07:57:02: 30000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sat, 03 Apr 2021 07:57:06: 41000000 INFO @ Sat, 03 Apr 2021 07:57:07: 36000000 INFO @ Sat, 03 Apr 2021 07:57:08: 31000000 INFO @ Sat, 03 Apr 2021 07:57:12: 42000000 INFO @ Sat, 03 Apr 2021 07:57:14: 37000000 INFO @ Sat, 03 Apr 2021 07:57:14: 32000000 INFO @ Sat, 03 Apr 2021 07:57:18: 43000000 INFO @ Sat, 03 Apr 2021 07:57:20: 33000000 INFO @ Sat, 03 Apr 2021 07:57:20: 38000000 INFO @ Sat, 03 Apr 2021 07:57:22: #1 tag size is determined as 50 bps INFO @ Sat, 03 Apr 2021 07:57:22: #1 tag size = 50 INFO @ Sat, 03 Apr 2021 07:57:22: #1 total tags in treatment: 16280162 INFO @ Sat, 03 Apr 2021 07:57:22: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 07:57:22: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 07:57:22: #1 tags after filtering in treatment: 12100421 INFO @ Sat, 03 Apr 2021 07:57:22: #1 Redundant rate of treatment: 0.26 INFO @ Sat, 03 Apr 2021 07:57:22: #1 finished! INFO @ Sat, 03 Apr 2021 07:57:22: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 07:57:22: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 07:57:23: #2 number of paired peaks: 756 WARNING @ Sat, 03 Apr 2021 07:57:23: Fewer paired peaks (756) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 756 pairs to build model! INFO @ Sat, 03 Apr 2021 07:57:23: start model_add_line... INFO @ Sat, 03 Apr 2021 07:57:23: start X-correlation... INFO @ Sat, 03 Apr 2021 07:57:23: end of X-cor INFO @ Sat, 03 Apr 2021 07:57:23: #2 finished! INFO @ Sat, 03 Apr 2021 07:57:23: #2 predicted fragment length is 63 bps INFO @ Sat, 03 Apr 2021 07:57:23: #2 alternative fragment length(s) may be 4,63 bps INFO @ Sat, 03 Apr 2021 07:57:23: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX4664633/SRX4664633.05_model.r WARNING @ Sat, 03 Apr 2021 07:57:23: #2 Since the d (63) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 07:57:23: #2 You may need to consider one of the other alternative d(s): 4,63 WARNING @ Sat, 03 Apr 2021 07:57:23: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 07:57:23: #3 Call peaks... INFO @ Sat, 03 Apr 2021 07:57:23: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 07:57:26: 34000000 INFO @ Sat, 03 Apr 2021 07:57:26: 39000000 INFO @ Sat, 03 Apr 2021 07:57:32: 35000000 INFO @ Sat, 03 Apr 2021 07:57:32: 40000000 INFO @ Sat, 03 Apr 2021 07:57:37: 36000000 INFO @ Sat, 03 Apr 2021 07:57:38: 41000000 INFO @ Sat, 03 Apr 2021 07:57:43: 37000000 INFO @ Sat, 03 Apr 2021 07:57:44: 42000000 INFO @ Sat, 03 Apr 2021 07:57:47: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 07:57:49: 38000000 INFO @ Sat, 03 Apr 2021 07:57:49: 43000000 INFO @ Sat, 03 Apr 2021 07:57:53: #1 tag size is determined as 50 bps INFO @ Sat, 03 Apr 2021 07:57:53: #1 tag size = 50 INFO @ Sat, 03 Apr 2021 07:57:53: #1 total tags in treatment: 16280162 INFO @ Sat, 03 Apr 2021 07:57:53: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 07:57:53: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 07:57:53: #1 tags after filtering in treatment: 12100421 INFO @ Sat, 03 Apr 2021 07:57:53: #1 Redundant rate of treatment: 0.26 INFO @ Sat, 03 Apr 2021 07:57:53: #1 finished! INFO @ Sat, 03 Apr 2021 07:57:53: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 07:57:53: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 07:57:54: #2 number of paired peaks: 756 WARNING @ Sat, 03 Apr 2021 07:57:54: Fewer paired peaks (756) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 756 pairs to build model! INFO @ Sat, 03 Apr 2021 07:57:54: start model_add_line... INFO @ Sat, 03 Apr 2021 07:57:54: start X-correlation... INFO @ Sat, 03 Apr 2021 07:57:54: end of X-cor INFO @ Sat, 03 Apr 2021 07:57:54: #2 finished! INFO @ Sat, 03 Apr 2021 07:57:54: #2 predicted fragment length is 63 bps INFO @ Sat, 03 Apr 2021 07:57:54: #2 alternative fragment length(s) may be 4,63 bps INFO @ Sat, 03 Apr 2021 07:57:54: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX4664633/SRX4664633.10_model.r WARNING @ Sat, 03 Apr 2021 07:57:54: #2 Since the d (63) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 07:57:54: #2 You may need to consider one of the other alternative d(s): 4,63 WARNING @ Sat, 03 Apr 2021 07:57:54: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 07:57:54: #3 Call peaks... INFO @ Sat, 03 Apr 2021 07:57:54: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 07:57:55: 39000000 INFO @ Sat, 03 Apr 2021 07:57:59: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX4664633/SRX4664633.05_peaks.xls INFO @ Sat, 03 Apr 2021 07:57:59: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX4664633/SRX4664633.05_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 07:57:59: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX4664633/SRX4664633.05_summits.bed INFO @ Sat, 03 Apr 2021 07:57:59: Done! pass1 - making usageList (15 chroms): 2 millis pass2 - checking and writing primary data (7149 records, 4 fields): 10 millis CompletedMACS2peakCalling INFO @ Sat, 03 Apr 2021 07:58:01: 40000000 INFO @ Sat, 03 Apr 2021 07:58:07: 41000000 INFO @ Sat, 03 Apr 2021 07:58:13: 42000000 INFO @ Sat, 03 Apr 2021 07:58:19: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 07:58:20: 43000000 INFO @ Sat, 03 Apr 2021 07:58:23: #1 tag size is determined as 50 bps INFO @ Sat, 03 Apr 2021 07:58:23: #1 tag size = 50 INFO @ Sat, 03 Apr 2021 07:58:23: #1 total tags in treatment: 16280162 INFO @ Sat, 03 Apr 2021 07:58:23: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 07:58:23: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 07:58:24: #1 tags after filtering in treatment: 12100421 INFO @ Sat, 03 Apr 2021 07:58:24: #1 Redundant rate of treatment: 0.26 INFO @ Sat, 03 Apr 2021 07:58:24: #1 finished! INFO @ Sat, 03 Apr 2021 07:58:24: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 07:58:24: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 07:58:25: #2 number of paired peaks: 756 WARNING @ Sat, 03 Apr 2021 07:58:25: Fewer paired peaks (756) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 756 pairs to build model! INFO @ Sat, 03 Apr 2021 07:58:25: start model_add_line... INFO @ Sat, 03 Apr 2021 07:58:25: start X-correlation... INFO @ Sat, 03 Apr 2021 07:58:25: end of X-cor INFO @ Sat, 03 Apr 2021 07:58:25: #2 finished! INFO @ Sat, 03 Apr 2021 07:58:25: #2 predicted fragment length is 63 bps INFO @ Sat, 03 Apr 2021 07:58:25: #2 alternative fragment length(s) may be 4,63 bps INFO @ Sat, 03 Apr 2021 07:58:25: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX4664633/SRX4664633.20_model.r WARNING @ Sat, 03 Apr 2021 07:58:25: #2 Since the d (63) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 07:58:25: #2 You may need to consider one of the other alternative d(s): 4,63 WARNING @ Sat, 03 Apr 2021 07:58:25: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 07:58:25: #3 Call peaks... INFO @ Sat, 03 Apr 2021 07:58:25: #3 Pre-compute pvalue-qvalue table... BigWig に変換しました。 INFO @ Sat, 03 Apr 2021 07:58:33: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX4664633/SRX4664633.10_peaks.xls INFO @ Sat, 03 Apr 2021 07:58:33: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX4664633/SRX4664633.10_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 07:58:33: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX4664633/SRX4664633.10_summits.bed INFO @ Sat, 03 Apr 2021 07:58:33: Done! pass1 - making usageList (14 chroms): 5 millis pass2 - checking and writing primary data (3011 records, 4 fields): 10 millis CompletedMACS2peakCalling INFO @ Sat, 03 Apr 2021 07:58:50: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 07:59:03: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX4664633/SRX4664633.20_peaks.xls INFO @ Sat, 03 Apr 2021 07:59:03: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX4664633/SRX4664633.20_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 07:59:03: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX4664633/SRX4664633.20_summits.bed INFO @ Sat, 03 Apr 2021 07:59:03: Done! pass1 - making usageList (13 chroms): 1 millis pass2 - checking and writing primary data (884 records, 4 fields): 4 millis CompletedMACS2peakCalling