Job ID = 6530845 SRX = SRX4453992 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2020-06-30T00:42:31 prefetch.2.10.7: 1) Downloading 'SRR7588750'... 2020-06-30T00:42:31 prefetch.2.10.7: Downloading via HTTPS... 2020-06-30T01:02:59 prefetch.2.10.7: HTTPS download succeed 2020-06-30T01:02:59 prefetch.2.10.7: 1) 'SRR7588750' was downloaded successfully 2020-06-30T01:02:59 prefetch.2.10.7: 'SRR7588750' has 0 unresolved dependencies Read 53999020 spots for SRR7588750/SRR7588750.sra Written 53999020 spots for SRR7588750/SRR7588750.sra fastq に変換しました。 bowtie でマッピング中... Your job 6531023 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:56:35 53999020 reads; of these: 53999020 (100.00%) were paired; of these: 14389598 (26.65%) aligned concordantly 0 times 25087974 (46.46%) aligned concordantly exactly 1 time 14521448 (26.89%) aligned concordantly >1 times ---- 14389598 pairs aligned concordantly 0 times; of these: 1006512 (6.99%) aligned discordantly 1 time ---- 13383086 pairs aligned 0 times concordantly or discordantly; of these: 26766172 mates make up the pairs; of these: 17838529 (66.65%) aligned 0 times 2330501 (8.71%) aligned exactly 1 time 6597142 (24.65%) aligned >1 times 83.48% overall alignment rate Time searching: 00:56:35 Overall time: 00:56:35 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 80 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 6177436 / 39770452 = 0.1553 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 30 Jun 2020 11:46:11: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX4453992/SRX4453992.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX4453992/SRX4453992.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX4453992/SRX4453992.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX4453992/SRX4453992.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 30 Jun 2020 11:46:11: #1 read tag files... INFO @ Tue, 30 Jun 2020 11:46:11: #1 read treatment tags... INFO @ Tue, 30 Jun 2020 11:46:20: 1000000 INFO @ Tue, 30 Jun 2020 11:46:29: 2000000 INFO @ Tue, 30 Jun 2020 11:46:37: 3000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 30 Jun 2020 11:46:40: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX4453992/SRX4453992.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX4453992/SRX4453992.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX4453992/SRX4453992.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX4453992/SRX4453992.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 30 Jun 2020 11:46:40: #1 read tag files... INFO @ Tue, 30 Jun 2020 11:46:40: #1 read treatment tags... INFO @ Tue, 30 Jun 2020 11:46:48: 4000000 INFO @ Tue, 30 Jun 2020 11:46:53: 1000000 INFO @ Tue, 30 Jun 2020 11:46:59: 5000000 INFO @ Tue, 30 Jun 2020 11:47:05: 2000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 30 Jun 2020 11:47:10: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX4453992/SRX4453992.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX4453992/SRX4453992.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX4453992/SRX4453992.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX4453992/SRX4453992.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 30 Jun 2020 11:47:10: #1 read tag files... INFO @ Tue, 30 Jun 2020 11:47:10: #1 read treatment tags... INFO @ Tue, 30 Jun 2020 11:47:11: 6000000 INFO @ Tue, 30 Jun 2020 11:47:18: 3000000 INFO @ Tue, 30 Jun 2020 11:47:23: 7000000 INFO @ Tue, 30 Jun 2020 11:47:23: 1000000 INFO @ Tue, 30 Jun 2020 11:47:30: 4000000 INFO @ Tue, 30 Jun 2020 11:47:35: 8000000 INFO @ Tue, 30 Jun 2020 11:47:36: 2000000 INFO @ Tue, 30 Jun 2020 11:47:43: 5000000 INFO @ Tue, 30 Jun 2020 11:47:46: 9000000 INFO @ Tue, 30 Jun 2020 11:47:50: 3000000 INFO @ Tue, 30 Jun 2020 11:47:56: 6000000 INFO @ Tue, 30 Jun 2020 11:47:58: 10000000 INFO @ Tue, 30 Jun 2020 11:48:03: 4000000 INFO @ Tue, 30 Jun 2020 11:48:09: 7000000 INFO @ Tue, 30 Jun 2020 11:48:10: 11000000 INFO @ Tue, 30 Jun 2020 11:48:17: 5000000 INFO @ Tue, 30 Jun 2020 11:48:21: 8000000 INFO @ Tue, 30 Jun 2020 11:48:22: 12000000 INFO @ Tue, 30 Jun 2020 11:48:30: 6000000 INFO @ Tue, 30 Jun 2020 11:48:34: 9000000 INFO @ Tue, 30 Jun 2020 11:48:34: 13000000 INFO @ Tue, 30 Jun 2020 11:48:43: 7000000 INFO @ Tue, 30 Jun 2020 11:48:46: 10000000 INFO @ Tue, 30 Jun 2020 11:48:46: 14000000 INFO @ Tue, 30 Jun 2020 11:48:56: 8000000 INFO @ Tue, 30 Jun 2020 11:48:58: 15000000 INFO @ Tue, 30 Jun 2020 11:48:58: 11000000 INFO @ Tue, 30 Jun 2020 11:49:09: 9000000 INFO @ Tue, 30 Jun 2020 11:49:10: 16000000 INFO @ Tue, 30 Jun 2020 11:49:11: 12000000 INFO @ Tue, 30 Jun 2020 11:49:22: 17000000 INFO @ Tue, 30 Jun 2020 11:49:22: 10000000 INFO @ Tue, 30 Jun 2020 11:49:23: 13000000 INFO @ Tue, 30 Jun 2020 11:49:33: 18000000 INFO @ Tue, 30 Jun 2020 11:49:36: 11000000 INFO @ Tue, 30 Jun 2020 11:49:36: 14000000 INFO @ Tue, 30 Jun 2020 11:49:45: 19000000 INFO @ Tue, 30 Jun 2020 11:49:48: 15000000 INFO @ Tue, 30 Jun 2020 11:49:49: 12000000 INFO @ Tue, 30 Jun 2020 11:49:57: 20000000 INFO @ Tue, 30 Jun 2020 11:50:01: 16000000 INFO @ Tue, 30 Jun 2020 11:50:02: 13000000 INFO @ Tue, 30 Jun 2020 11:50:09: 21000000 INFO @ Tue, 30 Jun 2020 11:50:13: 17000000 INFO @ Tue, 30 Jun 2020 11:50:15: 14000000 INFO @ Tue, 30 Jun 2020 11:50:20: 22000000 INFO @ Tue, 30 Jun 2020 11:50:26: 18000000 INFO @ Tue, 30 Jun 2020 11:50:28: 15000000 INFO @ Tue, 30 Jun 2020 11:50:32: 23000000 INFO @ Tue, 30 Jun 2020 11:50:38: 19000000 INFO @ Tue, 30 Jun 2020 11:50:41: 16000000 INFO @ Tue, 30 Jun 2020 11:50:44: 24000000 INFO @ Tue, 30 Jun 2020 11:50:51: 20000000 INFO @ Tue, 30 Jun 2020 11:50:55: 17000000 INFO @ Tue, 30 Jun 2020 11:50:56: 25000000 INFO @ Tue, 30 Jun 2020 11:51:04: 21000000 INFO @ Tue, 30 Jun 2020 11:51:07: 26000000 INFO @ Tue, 30 Jun 2020 11:51:08: 18000000 INFO @ Tue, 30 Jun 2020 11:51:16: 22000000 INFO @ Tue, 30 Jun 2020 11:51:19: 27000000 INFO @ Tue, 30 Jun 2020 11:51:21: 19000000 INFO @ Tue, 30 Jun 2020 11:51:29: 23000000 INFO @ Tue, 30 Jun 2020 11:51:31: 28000000 INFO @ Tue, 30 Jun 2020 11:51:35: 20000000 INFO @ Tue, 30 Jun 2020 11:51:41: 24000000 INFO @ Tue, 30 Jun 2020 11:51:43: 29000000 INFO @ Tue, 30 Jun 2020 11:51:48: 21000000 INFO @ Tue, 30 Jun 2020 11:51:54: 25000000 INFO @ Tue, 30 Jun 2020 11:51:54: 30000000 INFO @ Tue, 30 Jun 2020 11:52:01: 22000000 INFO @ Tue, 30 Jun 2020 11:52:06: 31000000 INFO @ Tue, 30 Jun 2020 11:52:06: 26000000 INFO @ Tue, 30 Jun 2020 11:52:14: 23000000 INFO @ Tue, 30 Jun 2020 11:52:18: 32000000 INFO @ Tue, 30 Jun 2020 11:52:19: 27000000 INFO @ Tue, 30 Jun 2020 11:52:28: 24000000 INFO @ Tue, 30 Jun 2020 11:52:29: 33000000 INFO @ Tue, 30 Jun 2020 11:52:31: 28000000 INFO @ Tue, 30 Jun 2020 11:52:40: 34000000 INFO @ Tue, 30 Jun 2020 11:52:41: 25000000 INFO @ Tue, 30 Jun 2020 11:52:44: 29000000 INFO @ Tue, 30 Jun 2020 11:52:52: 35000000 INFO @ Tue, 30 Jun 2020 11:52:54: 26000000 INFO @ Tue, 30 Jun 2020 11:52:56: 30000000 INFO @ Tue, 30 Jun 2020 11:53:03: 36000000 INFO @ Tue, 30 Jun 2020 11:53:07: 27000000 INFO @ Tue, 30 Jun 2020 11:53:09: 31000000 INFO @ Tue, 30 Jun 2020 11:53:15: 37000000 INFO @ Tue, 30 Jun 2020 11:53:20: 28000000 INFO @ Tue, 30 Jun 2020 11:53:22: 32000000 INFO @ Tue, 30 Jun 2020 11:53:26: 38000000 INFO @ Tue, 30 Jun 2020 11:53:33: 29000000 INFO @ Tue, 30 Jun 2020 11:53:34: 33000000 INFO @ Tue, 30 Jun 2020 11:53:38: 39000000 INFO @ Tue, 30 Jun 2020 11:53:46: 30000000 INFO @ Tue, 30 Jun 2020 11:53:47: 34000000 INFO @ Tue, 30 Jun 2020 11:53:49: 40000000 INFO @ Tue, 30 Jun 2020 11:53:59: 31000000 INFO @ Tue, 30 Jun 2020 11:53:59: 35000000 INFO @ Tue, 30 Jun 2020 11:54:01: 41000000 INFO @ Tue, 30 Jun 2020 11:54:12: 32000000 INFO @ Tue, 30 Jun 2020 11:54:12: 36000000 INFO @ Tue, 30 Jun 2020 11:54:13: 42000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 30 Jun 2020 11:54:24: 33000000 INFO @ Tue, 30 Jun 2020 11:54:24: 43000000 INFO @ Tue, 30 Jun 2020 11:54:24: 37000000 INFO @ Tue, 30 Jun 2020 11:54:36: 44000000 INFO @ Tue, 30 Jun 2020 11:54:37: 34000000 INFO @ Tue, 30 Jun 2020 11:54:37: 38000000 INFO @ Tue, 30 Jun 2020 11:54:47: 45000000 INFO @ Tue, 30 Jun 2020 11:54:49: 35000000 INFO @ Tue, 30 Jun 2020 11:54:49: 39000000 INFO @ Tue, 30 Jun 2020 11:54:59: 46000000 INFO @ Tue, 30 Jun 2020 11:55:02: 36000000 INFO @ Tue, 30 Jun 2020 11:55:02: 40000000 INFO @ Tue, 30 Jun 2020 11:55:10: 47000000 INFO @ Tue, 30 Jun 2020 11:55:14: 41000000 INFO @ Tue, 30 Jun 2020 11:55:15: 37000000 INFO @ Tue, 30 Jun 2020 11:55:22: 48000000 INFO @ Tue, 30 Jun 2020 11:55:27: 42000000 INFO @ Tue, 30 Jun 2020 11:55:28: 38000000 INFO @ Tue, 30 Jun 2020 11:55:33: 49000000 INFO @ Tue, 30 Jun 2020 11:55:39: 43000000 INFO @ Tue, 30 Jun 2020 11:55:41: 39000000 INFO @ Tue, 30 Jun 2020 11:55:45: 50000000 INFO @ Tue, 30 Jun 2020 11:55:52: 44000000 INFO @ Tue, 30 Jun 2020 11:55:54: 40000000 INFO @ Tue, 30 Jun 2020 11:55:56: 51000000 INFO @ Tue, 30 Jun 2020 11:56:04: 45000000 BigWig に変換しました。 INFO @ Tue, 30 Jun 2020 11:56:06: 41000000 INFO @ Tue, 30 Jun 2020 11:56:08: 52000000 INFO @ Tue, 30 Jun 2020 11:56:17: 46000000 INFO @ Tue, 30 Jun 2020 11:56:19: 42000000 INFO @ Tue, 30 Jun 2020 11:56:20: 53000000 INFO @ Tue, 30 Jun 2020 11:56:29: 47000000 INFO @ Tue, 30 Jun 2020 11:56:32: 54000000 INFO @ Tue, 30 Jun 2020 11:56:32: 43000000 INFO @ Tue, 30 Jun 2020 11:56:42: 48000000 INFO @ Tue, 30 Jun 2020 11:56:44: 55000000 INFO @ Tue, 30 Jun 2020 11:56:45: 44000000 INFO @ Tue, 30 Jun 2020 11:56:54: 49000000 INFO @ Tue, 30 Jun 2020 11:56:56: 56000000 INFO @ Tue, 30 Jun 2020 11:56:58: 45000000 INFO @ Tue, 30 Jun 2020 11:57:06: 50000000 INFO @ Tue, 30 Jun 2020 11:57:08: 57000000 INFO @ Tue, 30 Jun 2020 11:57:10: 46000000 INFO @ Tue, 30 Jun 2020 11:57:19: 51000000 INFO @ Tue, 30 Jun 2020 11:57:20: 58000000 INFO @ Tue, 30 Jun 2020 11:57:23: 47000000 INFO @ Tue, 30 Jun 2020 11:57:31: 52000000 INFO @ Tue, 30 Jun 2020 11:57:32: 59000000 INFO @ Tue, 30 Jun 2020 11:57:36: 48000000 INFO @ Tue, 30 Jun 2020 11:57:43: 60000000 INFO @ Tue, 30 Jun 2020 11:57:44: 53000000 INFO @ Tue, 30 Jun 2020 11:57:49: 49000000 INFO @ Tue, 30 Jun 2020 11:57:55: 61000000 INFO @ Tue, 30 Jun 2020 11:57:57: 54000000 INFO @ Tue, 30 Jun 2020 11:58:02: 50000000 INFO @ Tue, 30 Jun 2020 11:58:07: 62000000 INFO @ Tue, 30 Jun 2020 11:58:10: 55000000 INFO @ Tue, 30 Jun 2020 11:58:14: 51000000 INFO @ Tue, 30 Jun 2020 11:58:19: 63000000 INFO @ Tue, 30 Jun 2020 11:58:23: 56000000 INFO @ Tue, 30 Jun 2020 11:58:27: 52000000 INFO @ Tue, 30 Jun 2020 11:58:30: 64000000 INFO @ Tue, 30 Jun 2020 11:58:35: 57000000 INFO @ Tue, 30 Jun 2020 11:58:40: 53000000 INFO @ Tue, 30 Jun 2020 11:58:42: 65000000 INFO @ Tue, 30 Jun 2020 11:58:48: 58000000 INFO @ Tue, 30 Jun 2020 11:58:53: 54000000 INFO @ Tue, 30 Jun 2020 11:58:54: 66000000 INFO @ Tue, 30 Jun 2020 11:59:01: 59000000 INFO @ Tue, 30 Jun 2020 11:59:06: 67000000 INFO @ Tue, 30 Jun 2020 11:59:07: 55000000 INFO @ Tue, 30 Jun 2020 11:59:14: 60000000 INFO @ Tue, 30 Jun 2020 11:59:17: 68000000 INFO @ Tue, 30 Jun 2020 11:59:20: 56000000 INFO @ Tue, 30 Jun 2020 11:59:26: 61000000 INFO @ Tue, 30 Jun 2020 11:59:30: 69000000 INFO @ Tue, 30 Jun 2020 11:59:33: 57000000 INFO @ Tue, 30 Jun 2020 11:59:39: 62000000 INFO @ Tue, 30 Jun 2020 11:59:43: 70000000 INFO @ Tue, 30 Jun 2020 11:59:46: 58000000 INFO @ Tue, 30 Jun 2020 11:59:51: 63000000 INFO @ Tue, 30 Jun 2020 11:59:54: 71000000 INFO @ Tue, 30 Jun 2020 11:59:59: 59000000 INFO @ Tue, 30 Jun 2020 12:00:04: 64000000 INFO @ Tue, 30 Jun 2020 12:00:06: 72000000 INFO @ Tue, 30 Jun 2020 12:00:12: 60000000 INFO @ Tue, 30 Jun 2020 12:00:16: 65000000 INFO @ Tue, 30 Jun 2020 12:00:18: 73000000 INFO @ Tue, 30 Jun 2020 12:00:26: 61000000 INFO @ Tue, 30 Jun 2020 12:00:29: 66000000 INFO @ Tue, 30 Jun 2020 12:00:30: 74000000 INFO @ Tue, 30 Jun 2020 12:00:39: 62000000 INFO @ Tue, 30 Jun 2020 12:00:41: 75000000 INFO @ Tue, 30 Jun 2020 12:00:42: 67000000 INFO @ Tue, 30 Jun 2020 12:00:51: 63000000 INFO @ Tue, 30 Jun 2020 12:00:53: 76000000 INFO @ Tue, 30 Jun 2020 12:00:54: 68000000 INFO @ Tue, 30 Jun 2020 12:01:04: 64000000 INFO @ Tue, 30 Jun 2020 12:01:05: 77000000 INFO @ Tue, 30 Jun 2020 12:01:08: 69000000 INFO @ Tue, 30 Jun 2020 12:01:15: #1 tag size is determined as 141 bps INFO @ Tue, 30 Jun 2020 12:01:15: #1 tag size = 141 INFO @ Tue, 30 Jun 2020 12:01:15: #1 total tags in treatment: 33475716 INFO @ Tue, 30 Jun 2020 12:01:15: #1 user defined the maximum tags... INFO @ Tue, 30 Jun 2020 12:01:15: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 30 Jun 2020 12:01:15: #1 tags after filtering in treatment: 29875513 INFO @ Tue, 30 Jun 2020 12:01:15: #1 Redundant rate of treatment: 0.11 INFO @ Tue, 30 Jun 2020 12:01:15: #1 finished! INFO @ Tue, 30 Jun 2020 12:01:15: #2 Build Peak Model... INFO @ Tue, 30 Jun 2020 12:01:15: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 30 Jun 2020 12:01:17: #2 number of paired peaks: 39 WARNING @ Tue, 30 Jun 2020 12:01:17: Too few paired peaks (39) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 30 Jun 2020 12:01:17: Process for pairing-model is terminated! INFO @ Tue, 30 Jun 2020 12:01:17: 65000000 cut: /home/okishinya/chipatlas/results/dm3/SRX4453992/SRX4453992.05_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX4453992/SRX4453992.05_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX4453992/SRX4453992.05_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX4453992/SRX4453992.05_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Tue, 30 Jun 2020 12:01:21: 70000000 INFO @ Tue, 30 Jun 2020 12:01:30: 66000000 INFO @ Tue, 30 Jun 2020 12:01:34: 71000000 INFO @ Tue, 30 Jun 2020 12:01:43: 67000000 INFO @ Tue, 30 Jun 2020 12:01:46: 72000000 INFO @ Tue, 30 Jun 2020 12:01:56: 68000000 INFO @ Tue, 30 Jun 2020 12:01:59: 73000000 INFO @ Tue, 30 Jun 2020 12:02:09: 69000000 INFO @ Tue, 30 Jun 2020 12:02:11: 74000000 INFO @ Tue, 30 Jun 2020 12:02:23: 70000000 INFO @ Tue, 30 Jun 2020 12:02:23: 75000000 INFO @ Tue, 30 Jun 2020 12:02:36: 71000000 INFO @ Tue, 30 Jun 2020 12:02:36: 76000000 INFO @ Tue, 30 Jun 2020 12:02:48: 77000000 INFO @ Tue, 30 Jun 2020 12:02:48: 72000000 INFO @ Tue, 30 Jun 2020 12:02:58: #1 tag size is determined as 141 bps INFO @ Tue, 30 Jun 2020 12:02:58: #1 tag size = 141 INFO @ Tue, 30 Jun 2020 12:02:58: #1 total tags in treatment: 33475716 INFO @ Tue, 30 Jun 2020 12:02:58: #1 user defined the maximum tags... INFO @ Tue, 30 Jun 2020 12:02:58: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 30 Jun 2020 12:02:59: #1 tags after filtering in treatment: 29875513 INFO @ Tue, 30 Jun 2020 12:02:59: #1 Redundant rate of treatment: 0.11 INFO @ Tue, 30 Jun 2020 12:02:59: #1 finished! INFO @ Tue, 30 Jun 2020 12:02:59: #2 Build Peak Model... INFO @ Tue, 30 Jun 2020 12:02:59: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 30 Jun 2020 12:03:01: #2 number of paired peaks: 39 WARNING @ Tue, 30 Jun 2020 12:03:01: Too few paired peaks (39) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 30 Jun 2020 12:03:01: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/dm3/SRX4453992/SRX4453992.10_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX4453992/SRX4453992.10_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX4453992/SRX4453992.10_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX4453992/SRX4453992.10_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Tue, 30 Jun 2020 12:03:01: 73000000 INFO @ Tue, 30 Jun 2020 12:03:12: 74000000 INFO @ Tue, 30 Jun 2020 12:03:23: 75000000 INFO @ Tue, 30 Jun 2020 12:03:34: 76000000 INFO @ Tue, 30 Jun 2020 12:03:45: 77000000 INFO @ Tue, 30 Jun 2020 12:03:54: #1 tag size is determined as 141 bps INFO @ Tue, 30 Jun 2020 12:03:54: #1 tag size = 141 INFO @ Tue, 30 Jun 2020 12:03:54: #1 total tags in treatment: 33475716 INFO @ Tue, 30 Jun 2020 12:03:54: #1 user defined the maximum tags... INFO @ Tue, 30 Jun 2020 12:03:54: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 30 Jun 2020 12:03:55: #1 tags after filtering in treatment: 29875513 INFO @ Tue, 30 Jun 2020 12:03:55: #1 Redundant rate of treatment: 0.11 INFO @ Tue, 30 Jun 2020 12:03:55: #1 finished! INFO @ Tue, 30 Jun 2020 12:03:55: #2 Build Peak Model... INFO @ Tue, 30 Jun 2020 12:03:55: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 30 Jun 2020 12:03:57: #2 number of paired peaks: 39 WARNING @ Tue, 30 Jun 2020 12:03:57: Too few paired peaks (39) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 30 Jun 2020 12:03:57: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/dm3/SRX4453992/SRX4453992.20_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 0 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX4453992/SRX4453992.20_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX4453992/SRX4453992.20_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX4453992/SRX4453992.20_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling