Job ID = 6527930 SRX = SRX3293413 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2020-06-29T14:04:52 prefetch.2.10.7: 1) Downloading 'SRR6183241'... 2020-06-29T14:04:52 prefetch.2.10.7: Downloading via HTTPS... 2020-06-29T14:09:10 prefetch.2.10.7: HTTPS download succeed 2020-06-29T14:09:10 prefetch.2.10.7: 1) 'SRR6183241' was downloaded successfully 2020-06-29T14:09:10 prefetch.2.10.7: 'SRR6183241' has 0 unresolved dependencies Read 43978687 spots for SRR6183241/SRR6183241.sra Written 43978687 spots for SRR6183241/SRR6183241.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:07:57 43978687 reads; of these: 43978687 (100.00%) were paired; of these: 7722960 (17.56%) aligned concordantly 0 times 24428214 (55.55%) aligned concordantly exactly 1 time 11827513 (26.89%) aligned concordantly >1 times ---- 7722960 pairs aligned concordantly 0 times; of these: 2051796 (26.57%) aligned discordantly 1 time ---- 5671164 pairs aligned 0 times concordantly or discordantly; of these: 11342328 mates make up the pairs; of these: 5881710 (51.86%) aligned 0 times 2741593 (24.17%) aligned exactly 1 time 2719025 (23.97%) aligned >1 times 93.31% overall alignment rate Time searching: 01:07:57 Overall time: 01:07:57 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 24 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 3345150 / 37793367 = 0.0885 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 30 Jun 2020 00:47:35: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX3293413/SRX3293413.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX3293413/SRX3293413.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX3293413/SRX3293413.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX3293413/SRX3293413.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 30 Jun 2020 00:47:35: #1 read tag files... INFO @ Tue, 30 Jun 2020 00:47:35: #1 read treatment tags... INFO @ Tue, 30 Jun 2020 00:47:39: 1000000 INFO @ Tue, 30 Jun 2020 00:47:44: 2000000 INFO @ Tue, 30 Jun 2020 00:47:48: 3000000 INFO @ Tue, 30 Jun 2020 00:47:52: 4000000 INFO @ Tue, 30 Jun 2020 00:47:57: 5000000 INFO @ Tue, 30 Jun 2020 00:48:01: 6000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 30 Jun 2020 00:48:05: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX3293413/SRX3293413.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX3293413/SRX3293413.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX3293413/SRX3293413.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX3293413/SRX3293413.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 30 Jun 2020 00:48:05: #1 read tag files... INFO @ Tue, 30 Jun 2020 00:48:05: #1 read treatment tags... INFO @ Tue, 30 Jun 2020 00:48:05: 7000000 INFO @ Tue, 30 Jun 2020 00:48:10: 1000000 INFO @ Tue, 30 Jun 2020 00:48:10: 8000000 INFO @ Tue, 30 Jun 2020 00:48:15: 2000000 INFO @ Tue, 30 Jun 2020 00:48:15: 9000000 INFO @ Tue, 30 Jun 2020 00:48:19: 3000000 INFO @ Tue, 30 Jun 2020 00:48:20: 10000000 INFO @ Tue, 30 Jun 2020 00:48:24: 4000000 INFO @ Tue, 30 Jun 2020 00:48:25: 11000000 INFO @ Tue, 30 Jun 2020 00:48:29: 5000000 INFO @ Tue, 30 Jun 2020 00:48:29: 12000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 30 Jun 2020 00:48:34: 6000000 INFO @ Tue, 30 Jun 2020 00:48:34: 13000000 INFO @ Tue, 30 Jun 2020 00:48:35: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX3293413/SRX3293413.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX3293413/SRX3293413.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX3293413/SRX3293413.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX3293413/SRX3293413.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 30 Jun 2020 00:48:35: #1 read tag files... INFO @ Tue, 30 Jun 2020 00:48:35: #1 read treatment tags... INFO @ Tue, 30 Jun 2020 00:48:38: 7000000 INFO @ Tue, 30 Jun 2020 00:48:39: 14000000 INFO @ Tue, 30 Jun 2020 00:48:40: 1000000 INFO @ Tue, 30 Jun 2020 00:48:43: 8000000 INFO @ Tue, 30 Jun 2020 00:48:44: 15000000 INFO @ Tue, 30 Jun 2020 00:48:45: 2000000 INFO @ Tue, 30 Jun 2020 00:48:48: 9000000 INFO @ Tue, 30 Jun 2020 00:48:49: 16000000 INFO @ Tue, 30 Jun 2020 00:48:50: 3000000 INFO @ Tue, 30 Jun 2020 00:48:53: 10000000 INFO @ Tue, 30 Jun 2020 00:48:54: 17000000 INFO @ Tue, 30 Jun 2020 00:48:55: 4000000 INFO @ Tue, 30 Jun 2020 00:48:58: 11000000 INFO @ Tue, 30 Jun 2020 00:48:59: 18000000 INFO @ Tue, 30 Jun 2020 00:49:00: 5000000 INFO @ Tue, 30 Jun 2020 00:49:03: 12000000 INFO @ Tue, 30 Jun 2020 00:49:04: 19000000 INFO @ Tue, 30 Jun 2020 00:49:05: 6000000 INFO @ Tue, 30 Jun 2020 00:49:07: 13000000 INFO @ Tue, 30 Jun 2020 00:49:09: 20000000 INFO @ Tue, 30 Jun 2020 00:49:10: 7000000 INFO @ Tue, 30 Jun 2020 00:49:12: 14000000 INFO @ Tue, 30 Jun 2020 00:49:14: 21000000 INFO @ Tue, 30 Jun 2020 00:49:15: 8000000 INFO @ Tue, 30 Jun 2020 00:49:17: 15000000 INFO @ Tue, 30 Jun 2020 00:49:19: 22000000 INFO @ Tue, 30 Jun 2020 00:49:20: 9000000 INFO @ Tue, 30 Jun 2020 00:49:22: 16000000 INFO @ Tue, 30 Jun 2020 00:49:24: 23000000 INFO @ Tue, 30 Jun 2020 00:49:25: 10000000 INFO @ Tue, 30 Jun 2020 00:49:27: 17000000 INFO @ Tue, 30 Jun 2020 00:49:29: 24000000 INFO @ Tue, 30 Jun 2020 00:49:30: 11000000 INFO @ Tue, 30 Jun 2020 00:49:31: 18000000 INFO @ Tue, 30 Jun 2020 00:49:34: 25000000 INFO @ Tue, 30 Jun 2020 00:49:35: 12000000 INFO @ Tue, 30 Jun 2020 00:49:36: 19000000 INFO @ Tue, 30 Jun 2020 00:49:39: 26000000 INFO @ Tue, 30 Jun 2020 00:49:40: 13000000 INFO @ Tue, 30 Jun 2020 00:49:41: 20000000 INFO @ Tue, 30 Jun 2020 00:49:44: 27000000 INFO @ Tue, 30 Jun 2020 00:49:45: 14000000 INFO @ Tue, 30 Jun 2020 00:49:46: 21000000 INFO @ Tue, 30 Jun 2020 00:49:49: 28000000 INFO @ Tue, 30 Jun 2020 00:49:50: 15000000 INFO @ Tue, 30 Jun 2020 00:49:51: 22000000 INFO @ Tue, 30 Jun 2020 00:49:54: 29000000 INFO @ Tue, 30 Jun 2020 00:49:55: 16000000 INFO @ Tue, 30 Jun 2020 00:49:55: 23000000 INFO @ Tue, 30 Jun 2020 00:49:59: 30000000 INFO @ Tue, 30 Jun 2020 00:50:00: 17000000 INFO @ Tue, 30 Jun 2020 00:50:00: 24000000 INFO @ Tue, 30 Jun 2020 00:50:04: 31000000 INFO @ Tue, 30 Jun 2020 00:50:05: 18000000 INFO @ Tue, 30 Jun 2020 00:50:05: 25000000 INFO @ Tue, 30 Jun 2020 00:50:09: 32000000 INFO @ Tue, 30 Jun 2020 00:50:10: 19000000 INFO @ Tue, 30 Jun 2020 00:50:10: 26000000 INFO @ Tue, 30 Jun 2020 00:50:14: 33000000 INFO @ Tue, 30 Jun 2020 00:50:15: 20000000 INFO @ Tue, 30 Jun 2020 00:50:15: 27000000 INFO @ Tue, 30 Jun 2020 00:50:19: 34000000 INFO @ Tue, 30 Jun 2020 00:50:19: 28000000 INFO @ Tue, 30 Jun 2020 00:50:20: 21000000 INFO @ Tue, 30 Jun 2020 00:50:24: 35000000 INFO @ Tue, 30 Jun 2020 00:50:24: 29000000 INFO @ Tue, 30 Jun 2020 00:50:24: 22000000 INFO @ Tue, 30 Jun 2020 00:50:29: 36000000 INFO @ Tue, 30 Jun 2020 00:50:29: 30000000 INFO @ Tue, 30 Jun 2020 00:50:29: 23000000 INFO @ Tue, 30 Jun 2020 00:50:34: 37000000 INFO @ Tue, 30 Jun 2020 00:50:34: 31000000 INFO @ Tue, 30 Jun 2020 00:50:34: 24000000 INFO @ Tue, 30 Jun 2020 00:50:39: 38000000 INFO @ Tue, 30 Jun 2020 00:50:39: 32000000 INFO @ Tue, 30 Jun 2020 00:50:39: 25000000 INFO @ Tue, 30 Jun 2020 00:50:43: 33000000 INFO @ Tue, 30 Jun 2020 00:50:44: 39000000 INFO @ Tue, 30 Jun 2020 00:50:44: 26000000 INFO @ Tue, 30 Jun 2020 00:50:48: 34000000 INFO @ Tue, 30 Jun 2020 00:50:48: 40000000 INFO @ Tue, 30 Jun 2020 00:50:49: 27000000 INFO @ Tue, 30 Jun 2020 00:50:53: 35000000 INFO @ Tue, 30 Jun 2020 00:50:53: 41000000 INFO @ Tue, 30 Jun 2020 00:50:54: 28000000 INFO @ Tue, 30 Jun 2020 00:50:58: 36000000 INFO @ Tue, 30 Jun 2020 00:50:58: 42000000 INFO @ Tue, 30 Jun 2020 00:50:59: 29000000 INFO @ Tue, 30 Jun 2020 00:51:02: 37000000 INFO @ Tue, 30 Jun 2020 00:51:03: 43000000 INFO @ Tue, 30 Jun 2020 00:51:04: 30000000 INFO @ Tue, 30 Jun 2020 00:51:07: 38000000 INFO @ Tue, 30 Jun 2020 00:51:08: 44000000 INFO @ Tue, 30 Jun 2020 00:51:09: 31000000 INFO @ Tue, 30 Jun 2020 00:51:12: 39000000 INFO @ Tue, 30 Jun 2020 00:51:13: 45000000 INFO @ Tue, 30 Jun 2020 00:51:14: 32000000 INFO @ Tue, 30 Jun 2020 00:51:17: 40000000 INFO @ Tue, 30 Jun 2020 00:51:18: 46000000 INFO @ Tue, 30 Jun 2020 00:51:19: 33000000 INFO @ Tue, 30 Jun 2020 00:51:22: 41000000 INFO @ Tue, 30 Jun 2020 00:51:23: 47000000 INFO @ Tue, 30 Jun 2020 00:51:24: 34000000 INFO @ Tue, 30 Jun 2020 00:51:26: 42000000 INFO @ Tue, 30 Jun 2020 00:51:28: 48000000 INFO @ Tue, 30 Jun 2020 00:51:29: 35000000 INFO @ Tue, 30 Jun 2020 00:51:31: 43000000 INFO @ Tue, 30 Jun 2020 00:51:33: 49000000 INFO @ Tue, 30 Jun 2020 00:51:34: 36000000 INFO @ Tue, 30 Jun 2020 00:51:36: 44000000 INFO @ Tue, 30 Jun 2020 00:51:38: 50000000 INFO @ Tue, 30 Jun 2020 00:51:39: 37000000 INFO @ Tue, 30 Jun 2020 00:51:41: 45000000 INFO @ Tue, 30 Jun 2020 00:51:43: 51000000 INFO @ Tue, 30 Jun 2020 00:51:44: 38000000 INFO @ Tue, 30 Jun 2020 00:51:45: 46000000 INFO @ Tue, 30 Jun 2020 00:51:48: 52000000 INFO @ Tue, 30 Jun 2020 00:51:49: 39000000 INFO @ Tue, 30 Jun 2020 00:51:50: 47000000 INFO @ Tue, 30 Jun 2020 00:51:53: 53000000 INFO @ Tue, 30 Jun 2020 00:51:54: 40000000 INFO @ Tue, 30 Jun 2020 00:51:55: 48000000 INFO @ Tue, 30 Jun 2020 00:51:58: 54000000 INFO @ Tue, 30 Jun 2020 00:51:59: 41000000 INFO @ Tue, 30 Jun 2020 00:52:00: 49000000 INFO @ Tue, 30 Jun 2020 00:52:03: 55000000 INFO @ Tue, 30 Jun 2020 00:52:03: 42000000 INFO @ Tue, 30 Jun 2020 00:52:05: 50000000 INFO @ Tue, 30 Jun 2020 00:52:07: 56000000 INFO @ Tue, 30 Jun 2020 00:52:08: 43000000 INFO @ Tue, 30 Jun 2020 00:52:09: 51000000 INFO @ Tue, 30 Jun 2020 00:52:12: 57000000 INFO @ Tue, 30 Jun 2020 00:52:13: 44000000 INFO @ Tue, 30 Jun 2020 00:52:14: 52000000 INFO @ Tue, 30 Jun 2020 00:52:17: 58000000 INFO @ Tue, 30 Jun 2020 00:52:18: 45000000 INFO @ Tue, 30 Jun 2020 00:52:19: 53000000 INFO @ Tue, 30 Jun 2020 00:52:22: 59000000 INFO @ Tue, 30 Jun 2020 00:52:23: 46000000 INFO @ Tue, 30 Jun 2020 00:52:24: 54000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 30 Jun 2020 00:52:27: 60000000 INFO @ Tue, 30 Jun 2020 00:52:28: 47000000 INFO @ Tue, 30 Jun 2020 00:52:28: 55000000 INFO @ Tue, 30 Jun 2020 00:52:32: 61000000 INFO @ Tue, 30 Jun 2020 00:52:33: 48000000 INFO @ Tue, 30 Jun 2020 00:52:33: 56000000 INFO @ Tue, 30 Jun 2020 00:52:37: 62000000 INFO @ Tue, 30 Jun 2020 00:52:38: 49000000 INFO @ Tue, 30 Jun 2020 00:52:38: 57000000 INFO @ Tue, 30 Jun 2020 00:52:42: 63000000 INFO @ Tue, 30 Jun 2020 00:52:42: 50000000 INFO @ Tue, 30 Jun 2020 00:52:43: 58000000 INFO @ Tue, 30 Jun 2020 00:52:47: 64000000 INFO @ Tue, 30 Jun 2020 00:52:47: 51000000 INFO @ Tue, 30 Jun 2020 00:52:48: 59000000 INFO @ Tue, 30 Jun 2020 00:52:51: 65000000 INFO @ Tue, 30 Jun 2020 00:52:52: 52000000 INFO @ Tue, 30 Jun 2020 00:52:52: 60000000 INFO @ Tue, 30 Jun 2020 00:52:56: 66000000 INFO @ Tue, 30 Jun 2020 00:52:57: 53000000 INFO @ Tue, 30 Jun 2020 00:52:57: 61000000 INFO @ Tue, 30 Jun 2020 00:53:01: 67000000 INFO @ Tue, 30 Jun 2020 00:53:02: 54000000 INFO @ Tue, 30 Jun 2020 00:53:02: 62000000 INFO @ Tue, 30 Jun 2020 00:53:06: 68000000 INFO @ Tue, 30 Jun 2020 00:53:06: 55000000 INFO @ Tue, 30 Jun 2020 00:53:07: 63000000 INFO @ Tue, 30 Jun 2020 00:53:10: 69000000 INFO @ Tue, 30 Jun 2020 00:53:11: 56000000 INFO @ Tue, 30 Jun 2020 00:53:11: 64000000 INFO @ Tue, 30 Jun 2020 00:53:15: 70000000 INFO @ Tue, 30 Jun 2020 00:53:16: 65000000 INFO @ Tue, 30 Jun 2020 00:53:16: 57000000 INFO @ Tue, 30 Jun 2020 00:53:20: 71000000 INFO @ Tue, 30 Jun 2020 00:53:21: 66000000 INFO @ Tue, 30 Jun 2020 00:53:21: 58000000 INFO @ Tue, 30 Jun 2020 00:53:25: 72000000 INFO @ Tue, 30 Jun 2020 00:53:26: 67000000 INFO @ Tue, 30 Jun 2020 00:53:26: 59000000 INFO @ Tue, 30 Jun 2020 00:53:29: 73000000 INFO @ Tue, 30 Jun 2020 00:53:30: 68000000 INFO @ Tue, 30 Jun 2020 00:53:31: 60000000 INFO @ Tue, 30 Jun 2020 00:53:34: 74000000 INFO @ Tue, 30 Jun 2020 00:53:35: 69000000 INFO @ Tue, 30 Jun 2020 00:53:36: 61000000 INFO @ Tue, 30 Jun 2020 00:53:39: 75000000 INFO @ Tue, 30 Jun 2020 00:53:40: 70000000 INFO @ Tue, 30 Jun 2020 00:53:41: 62000000 INFO @ Tue, 30 Jun 2020 00:53:41: #1 tag size is determined as 25 bps INFO @ Tue, 30 Jun 2020 00:53:41: #1 tag size = 25 INFO @ Tue, 30 Jun 2020 00:53:41: #1 total tags in treatment: 32921653 INFO @ Tue, 30 Jun 2020 00:53:41: #1 user defined the maximum tags... INFO @ Tue, 30 Jun 2020 00:53:41: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 30 Jun 2020 00:53:41: #1 tags after filtering in treatment: 24079318 INFO @ Tue, 30 Jun 2020 00:53:41: #1 Redundant rate of treatment: 0.27 INFO @ Tue, 30 Jun 2020 00:53:41: #1 finished! INFO @ Tue, 30 Jun 2020 00:53:41: #2 Build Peak Model... INFO @ Tue, 30 Jun 2020 00:53:41: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 30 Jun 2020 00:53:43: #2 number of paired peaks: 9 WARNING @ Tue, 30 Jun 2020 00:53:43: Too few paired peaks (9) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 30 Jun 2020 00:53:43: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/dm3/SRX3293413/SRX3293413.05_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 0 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX3293413/SRX3293413.05_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX3293413/SRX3293413.05_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX3293413/SRX3293413.05_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Tue, 30 Jun 2020 00:53:45: 71000000 INFO @ Tue, 30 Jun 2020 00:53:45: 63000000 INFO @ Tue, 30 Jun 2020 00:53:49: 72000000 INFO @ Tue, 30 Jun 2020 00:53:50: 64000000 INFO @ Tue, 30 Jun 2020 00:53:54: 73000000 INFO @ Tue, 30 Jun 2020 00:53:55: 65000000 BigWig に変換しました。 INFO @ Tue, 30 Jun 2020 00:53:59: 74000000 INFO @ Tue, 30 Jun 2020 00:54:00: 66000000 INFO @ Tue, 30 Jun 2020 00:54:03: 75000000 INFO @ Tue, 30 Jun 2020 00:54:05: 67000000 INFO @ Tue, 30 Jun 2020 00:54:06: #1 tag size is determined as 25 bps INFO @ Tue, 30 Jun 2020 00:54:06: #1 tag size = 25 INFO @ Tue, 30 Jun 2020 00:54:06: #1 total tags in treatment: 32921653 INFO @ Tue, 30 Jun 2020 00:54:06: #1 user defined the maximum tags... INFO @ Tue, 30 Jun 2020 00:54:06: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 30 Jun 2020 00:54:06: #1 tags after filtering in treatment: 24079318 INFO @ Tue, 30 Jun 2020 00:54:06: #1 Redundant rate of treatment: 0.27 INFO @ Tue, 30 Jun 2020 00:54:06: #1 finished! INFO @ Tue, 30 Jun 2020 00:54:06: #2 Build Peak Model... INFO @ Tue, 30 Jun 2020 00:54:06: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 30 Jun 2020 00:54:08: #2 number of paired peaks: 9 WARNING @ Tue, 30 Jun 2020 00:54:08: Too few paired peaks (9) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 30 Jun 2020 00:54:08: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/dm3/SRX3293413/SRX3293413.10_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 0 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX3293413/SRX3293413.10_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX3293413/SRX3293413.10_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX3293413/SRX3293413.10_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Tue, 30 Jun 2020 00:54:09: 68000000 INFO @ Tue, 30 Jun 2020 00:54:14: 69000000 INFO @ Tue, 30 Jun 2020 00:54:18: 70000000 INFO @ Tue, 30 Jun 2020 00:54:23: 71000000 INFO @ Tue, 30 Jun 2020 00:54:27: 72000000 INFO @ Tue, 30 Jun 2020 00:54:32: 73000000 INFO @ Tue, 30 Jun 2020 00:54:36: 74000000 INFO @ Tue, 30 Jun 2020 00:54:40: 75000000 INFO @ Tue, 30 Jun 2020 00:54:42: #1 tag size is determined as 25 bps INFO @ Tue, 30 Jun 2020 00:54:42: #1 tag size = 25 INFO @ Tue, 30 Jun 2020 00:54:42: #1 total tags in treatment: 32921653 INFO @ Tue, 30 Jun 2020 00:54:42: #1 user defined the maximum tags... INFO @ Tue, 30 Jun 2020 00:54:42: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 30 Jun 2020 00:54:43: #1 tags after filtering in treatment: 24079318 INFO @ Tue, 30 Jun 2020 00:54:43: #1 Redundant rate of treatment: 0.27 INFO @ Tue, 30 Jun 2020 00:54:43: #1 finished! INFO @ Tue, 30 Jun 2020 00:54:43: #2 Build Peak Model... INFO @ Tue, 30 Jun 2020 00:54:43: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 30 Jun 2020 00:54:44: #2 number of paired peaks: 9 WARNING @ Tue, 30 Jun 2020 00:54:44: Too few paired peaks (9) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 30 Jun 2020 00:54:44: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/dm3/SRX3293413/SRX3293413.20_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 0 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX3293413/SRX3293413.20_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX3293413/SRX3293413.20_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX3293413/SRX3293413.20_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling