Job ID = 12265185 SRX = SRX3282118 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 43706348 spots for SRR6171269/SRR6171269.sra Written 43706348 spots for SRR6171269/SRR6171269.sra fastq に変換しました。 bowtie でマッピング中... Your job 12265919 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:41:27 43706348 reads; of these: 43706348 (100.00%) were paired; of these: 13957783 (31.94%) aligned concordantly 0 times 14085501 (32.23%) aligned concordantly exactly 1 time 15663064 (35.84%) aligned concordantly >1 times ---- 13957783 pairs aligned concordantly 0 times; of these: 2480051 (17.77%) aligned discordantly 1 time ---- 11477732 pairs aligned 0 times concordantly or discordantly; of these: 22955464 mates make up the pairs; of these: 17987393 (78.36%) aligned 0 times 758910 (3.31%) aligned exactly 1 time 4209161 (18.34%) aligned >1 times 79.42% overall alignment rate Time searching: 01:41:27 Overall time: 01:41:27 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 32 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 13364181 / 32028039 = 0.4173 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 08:53:56: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX3282118/SRX3282118.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX3282118/SRX3282118.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX3282118/SRX3282118.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX3282118/SRX3282118.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 08:53:56: #1 read tag files... INFO @ Sat, 03 Apr 2021 08:53:56: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 08:54:06: 1000000 INFO @ Sat, 03 Apr 2021 08:54:15: 2000000 WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 08:54:25: 3000000 INFO @ Sat, 03 Apr 2021 08:54:26: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX3282118/SRX3282118.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX3282118/SRX3282118.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX3282118/SRX3282118.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX3282118/SRX3282118.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 08:54:26: #1 read tag files... INFO @ Sat, 03 Apr 2021 08:54:26: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 08:54:35: 4000000 INFO @ Sat, 03 Apr 2021 08:54:38: 1000000 INFO @ Sat, 03 Apr 2021 08:54:44: 5000000 INFO @ Sat, 03 Apr 2021 08:54:49: 2000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 08:54:54: 6000000 INFO @ Sat, 03 Apr 2021 08:54:56: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX3282118/SRX3282118.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX3282118/SRX3282118.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX3282118/SRX3282118.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX3282118/SRX3282118.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 08:54:56: #1 read tag files... INFO @ Sat, 03 Apr 2021 08:54:56: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 08:55:01: 3000000 INFO @ Sat, 03 Apr 2021 08:55:04: 7000000 INFO @ Sat, 03 Apr 2021 08:55:08: 1000000 INFO @ Sat, 03 Apr 2021 08:55:13: 4000000 INFO @ Sat, 03 Apr 2021 08:55:14: 8000000 INFO @ Sat, 03 Apr 2021 08:55:20: 2000000 INFO @ Sat, 03 Apr 2021 08:55:24: 9000000 INFO @ Sat, 03 Apr 2021 08:55:25: 5000000 INFO @ Sat, 03 Apr 2021 08:55:32: 3000000 INFO @ Sat, 03 Apr 2021 08:55:33: 10000000 INFO @ Sat, 03 Apr 2021 08:55:37: 6000000 INFO @ Sat, 03 Apr 2021 08:55:43: 11000000 INFO @ Sat, 03 Apr 2021 08:55:44: 4000000 INFO @ Sat, 03 Apr 2021 08:55:49: 7000000 INFO @ Sat, 03 Apr 2021 08:55:53: 12000000 INFO @ Sat, 03 Apr 2021 08:55:55: 5000000 INFO @ Sat, 03 Apr 2021 08:56:01: 8000000 INFO @ Sat, 03 Apr 2021 08:56:03: 13000000 INFO @ Sat, 03 Apr 2021 08:56:07: 6000000 INFO @ Sat, 03 Apr 2021 08:56:12: 9000000 INFO @ Sat, 03 Apr 2021 08:56:13: 14000000 INFO @ Sat, 03 Apr 2021 08:56:19: 7000000 INFO @ Sat, 03 Apr 2021 08:56:22: 15000000 INFO @ Sat, 03 Apr 2021 08:56:24: 10000000 INFO @ Sat, 03 Apr 2021 08:56:31: 8000000 INFO @ Sat, 03 Apr 2021 08:56:32: 16000000 INFO @ Sat, 03 Apr 2021 08:56:36: 11000000 INFO @ Sat, 03 Apr 2021 08:56:42: 17000000 INFO @ Sat, 03 Apr 2021 08:56:43: 9000000 INFO @ Sat, 03 Apr 2021 08:56:47: 12000000 INFO @ Sat, 03 Apr 2021 08:56:52: 18000000 INFO @ Sat, 03 Apr 2021 08:56:55: 10000000 INFO @ Sat, 03 Apr 2021 08:56:59: 13000000 INFO @ Sat, 03 Apr 2021 08:57:02: 19000000 INFO @ Sat, 03 Apr 2021 08:57:06: 11000000 INFO @ Sat, 03 Apr 2021 08:57:12: 14000000 INFO @ Sat, 03 Apr 2021 08:57:12: 20000000 INFO @ Sat, 03 Apr 2021 08:57:18: 12000000 INFO @ Sat, 03 Apr 2021 08:57:22: 21000000 INFO @ Sat, 03 Apr 2021 08:57:24: 15000000 INFO @ Sat, 03 Apr 2021 08:57:30: 13000000 INFO @ Sat, 03 Apr 2021 08:57:32: 22000000 INFO @ Sat, 03 Apr 2021 08:57:36: 16000000 INFO @ Sat, 03 Apr 2021 08:57:42: 14000000 INFO @ Sat, 03 Apr 2021 08:57:42: 23000000 INFO @ Sat, 03 Apr 2021 08:57:48: 17000000 INFO @ Sat, 03 Apr 2021 08:57:52: 24000000 INFO @ Sat, 03 Apr 2021 08:57:53: 15000000 INFO @ Sat, 03 Apr 2021 08:58:01: 18000000 INFO @ Sat, 03 Apr 2021 08:58:02: 25000000 INFO @ Sat, 03 Apr 2021 08:58:05: 16000000 INFO @ Sat, 03 Apr 2021 08:58:12: 26000000 INFO @ Sat, 03 Apr 2021 08:58:13: 19000000 INFO @ Sat, 03 Apr 2021 08:58:17: 17000000 INFO @ Sat, 03 Apr 2021 08:58:22: 27000000 INFO @ Sat, 03 Apr 2021 08:58:26: 20000000 INFO @ Sat, 03 Apr 2021 08:58:28: 18000000 INFO @ Sat, 03 Apr 2021 08:58:31: 28000000 INFO @ Sat, 03 Apr 2021 08:58:39: 21000000 INFO @ Sat, 03 Apr 2021 08:58:40: 19000000 INFO @ Sat, 03 Apr 2021 08:58:40: 29000000 INFO @ Sat, 03 Apr 2021 08:58:50: 30000000 INFO @ Sat, 03 Apr 2021 08:58:52: 22000000 INFO @ Sat, 03 Apr 2021 08:58:52: 20000000 INFO @ Sat, 03 Apr 2021 08:59:00: 31000000 INFO @ Sat, 03 Apr 2021 08:59:05: 21000000 INFO @ Sat, 03 Apr 2021 08:59:05: 23000000 INFO @ Sat, 03 Apr 2021 08:59:09: 32000000 INFO @ Sat, 03 Apr 2021 08:59:17: 22000000 INFO @ Sat, 03 Apr 2021 08:59:17: 33000000 INFO @ Sat, 03 Apr 2021 08:59:18: 24000000 INFO @ Sat, 03 Apr 2021 08:59:27: 34000000 INFO @ Sat, 03 Apr 2021 08:59:29: 23000000 INFO @ Sat, 03 Apr 2021 08:59:30: 25000000 INFO @ Sat, 03 Apr 2021 08:59:36: 35000000 INFO @ Sat, 03 Apr 2021 08:59:42: 24000000 INFO @ Sat, 03 Apr 2021 08:59:42: 26000000 INFO @ Sat, 03 Apr 2021 08:59:46: 36000000 INFO @ Sat, 03 Apr 2021 08:59:54: 25000000 INFO @ Sat, 03 Apr 2021 08:59:54: 27000000 INFO @ Sat, 03 Apr 2021 08:59:55: 37000000 INFO @ Sat, 03 Apr 2021 09:00:05: 38000000 INFO @ Sat, 03 Apr 2021 09:00:05: 28000000 INFO @ Sat, 03 Apr 2021 09:00:06: 26000000 INFO @ Sat, 03 Apr 2021 09:00:14: 39000000 INFO @ Sat, 03 Apr 2021 09:00:17: 29000000 INFO @ Sat, 03 Apr 2021 09:00:17: 27000000 INFO @ Sat, 03 Apr 2021 09:00:24: 40000000 INFO @ Sat, 03 Apr 2021 09:00:28: 30000000 INFO @ Sat, 03 Apr 2021 09:00:29: 28000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sat, 03 Apr 2021 09:00:33: 41000000 INFO @ Sat, 03 Apr 2021 09:00:40: 31000000 INFO @ Sat, 03 Apr 2021 09:00:40: 29000000 INFO @ Sat, 03 Apr 2021 09:00:43: 42000000 INFO @ Sat, 03 Apr 2021 09:00:50: #1 tag size is determined as 100 bps INFO @ Sat, 03 Apr 2021 09:00:50: #1 tag size = 100 INFO @ Sat, 03 Apr 2021 09:00:50: #1 total tags in treatment: 16634828 INFO @ Sat, 03 Apr 2021 09:00:50: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 09:00:50: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 09:00:50: 32000000 INFO @ Sat, 03 Apr 2021 09:00:50: #1 tags after filtering in treatment: 11935862 INFO @ Sat, 03 Apr 2021 09:00:50: #1 Redundant rate of treatment: 0.28 INFO @ Sat, 03 Apr 2021 09:00:50: #1 finished! INFO @ Sat, 03 Apr 2021 09:00:50: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 09:00:50: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 09:00:51: 30000000 INFO @ Sat, 03 Apr 2021 09:00:52: #2 number of paired peaks: 993 WARNING @ Sat, 03 Apr 2021 09:00:52: Fewer paired peaks (993) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 993 pairs to build model! INFO @ Sat, 03 Apr 2021 09:00:52: start model_add_line... INFO @ Sat, 03 Apr 2021 09:00:52: start X-correlation... INFO @ Sat, 03 Apr 2021 09:00:52: end of X-cor INFO @ Sat, 03 Apr 2021 09:00:52: #2 finished! INFO @ Sat, 03 Apr 2021 09:00:52: #2 predicted fragment length is 121 bps INFO @ Sat, 03 Apr 2021 09:00:52: #2 alternative fragment length(s) may be 121 bps INFO @ Sat, 03 Apr 2021 09:00:52: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX3282118/SRX3282118.05_model.r WARNING @ Sat, 03 Apr 2021 09:00:52: #2 Since the d (121) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 09:00:52: #2 You may need to consider one of the other alternative d(s): 121 WARNING @ Sat, 03 Apr 2021 09:00:52: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 09:00:52: #3 Call peaks... INFO @ Sat, 03 Apr 2021 09:00:52: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 09:01:01: 33000000 INFO @ Sat, 03 Apr 2021 09:01:02: 31000000 INFO @ Sat, 03 Apr 2021 09:01:12: 34000000 INFO @ Sat, 03 Apr 2021 09:01:13: 32000000 INFO @ Sat, 03 Apr 2021 09:01:23: 35000000 INFO @ Sat, 03 Apr 2021 09:01:23: 33000000 INFO @ Sat, 03 Apr 2021 09:01:25: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 09:01:34: 36000000 INFO @ Sat, 03 Apr 2021 09:01:34: 34000000 INFO @ Sat, 03 Apr 2021 09:01:43: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX3282118/SRX3282118.05_peaks.xls INFO @ Sat, 03 Apr 2021 09:01:44: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX3282118/SRX3282118.05_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 09:01:44: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX3282118/SRX3282118.05_summits.bed INFO @ Sat, 03 Apr 2021 09:01:44: Done! pass1 - making usageList (15 chroms): 3 millis pass2 - checking and writing primary data (7903 records, 4 fields): 12 millis CompletedMACS2peakCalling INFO @ Sat, 03 Apr 2021 09:01:45: 37000000 INFO @ Sat, 03 Apr 2021 09:01:45: 35000000 BigWig に変換しました。 INFO @ Sat, 03 Apr 2021 09:01:56: 38000000 INFO @ Sat, 03 Apr 2021 09:01:56: 36000000 INFO @ Sat, 03 Apr 2021 09:02:07: 39000000 INFO @ Sat, 03 Apr 2021 09:02:08: 37000000 INFO @ Sat, 03 Apr 2021 09:02:18: 40000000 INFO @ Sat, 03 Apr 2021 09:02:19: 38000000 INFO @ Sat, 03 Apr 2021 09:02:29: 41000000 INFO @ Sat, 03 Apr 2021 09:02:30: 39000000 INFO @ Sat, 03 Apr 2021 09:02:40: 42000000 INFO @ Sat, 03 Apr 2021 09:02:41: 40000000 INFO @ Sat, 03 Apr 2021 09:02:48: #1 tag size is determined as 100 bps INFO @ Sat, 03 Apr 2021 09:02:48: #1 tag size = 100 INFO @ Sat, 03 Apr 2021 09:02:48: #1 total tags in treatment: 16634828 INFO @ Sat, 03 Apr 2021 09:02:48: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 09:02:48: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 09:02:48: #1 tags after filtering in treatment: 11935862 INFO @ Sat, 03 Apr 2021 09:02:48: #1 Redundant rate of treatment: 0.28 INFO @ Sat, 03 Apr 2021 09:02:48: #1 finished! INFO @ Sat, 03 Apr 2021 09:02:48: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 09:02:48: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 09:02:50: #2 number of paired peaks: 993 WARNING @ Sat, 03 Apr 2021 09:02:50: Fewer paired peaks (993) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 993 pairs to build model! INFO @ Sat, 03 Apr 2021 09:02:50: start model_add_line... INFO @ Sat, 03 Apr 2021 09:02:50: start X-correlation... INFO @ Sat, 03 Apr 2021 09:02:50: end of X-cor INFO @ Sat, 03 Apr 2021 09:02:50: #2 finished! INFO @ Sat, 03 Apr 2021 09:02:50: #2 predicted fragment length is 121 bps INFO @ Sat, 03 Apr 2021 09:02:50: #2 alternative fragment length(s) may be 121 bps INFO @ Sat, 03 Apr 2021 09:02:50: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX3282118/SRX3282118.10_model.r WARNING @ Sat, 03 Apr 2021 09:02:50: #2 Since the d (121) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 09:02:50: #2 You may need to consider one of the other alternative d(s): 121 WARNING @ Sat, 03 Apr 2021 09:02:50: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 09:02:50: #3 Call peaks... INFO @ Sat, 03 Apr 2021 09:02:50: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 09:02:52: 41000000 INFO @ Sat, 03 Apr 2021 09:03:03: 42000000 INFO @ Sat, 03 Apr 2021 09:03:10: #1 tag size is determined as 100 bps INFO @ Sat, 03 Apr 2021 09:03:10: #1 tag size = 100 INFO @ Sat, 03 Apr 2021 09:03:10: #1 total tags in treatment: 16634828 INFO @ Sat, 03 Apr 2021 09:03:10: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 09:03:10: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 09:03:11: #1 tags after filtering in treatment: 11935862 INFO @ Sat, 03 Apr 2021 09:03:11: #1 Redundant rate of treatment: 0.28 INFO @ Sat, 03 Apr 2021 09:03:11: #1 finished! INFO @ Sat, 03 Apr 2021 09:03:11: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 09:03:11: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 09:03:12: #2 number of paired peaks: 993 WARNING @ Sat, 03 Apr 2021 09:03:12: Fewer paired peaks (993) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 993 pairs to build model! INFO @ Sat, 03 Apr 2021 09:03:12: start model_add_line... INFO @ Sat, 03 Apr 2021 09:03:12: start X-correlation... INFO @ Sat, 03 Apr 2021 09:03:12: end of X-cor INFO @ Sat, 03 Apr 2021 09:03:12: #2 finished! INFO @ Sat, 03 Apr 2021 09:03:12: #2 predicted fragment length is 121 bps INFO @ Sat, 03 Apr 2021 09:03:12: #2 alternative fragment length(s) may be 121 bps INFO @ Sat, 03 Apr 2021 09:03:12: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX3282118/SRX3282118.20_model.r WARNING @ Sat, 03 Apr 2021 09:03:12: #2 Since the d (121) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 09:03:12: #2 You may need to consider one of the other alternative d(s): 121 WARNING @ Sat, 03 Apr 2021 09:03:12: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 09:03:12: #3 Call peaks... INFO @ Sat, 03 Apr 2021 09:03:12: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 09:03:23: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 09:03:42: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX3282118/SRX3282118.10_peaks.xls INFO @ Sat, 03 Apr 2021 09:03:42: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX3282118/SRX3282118.10_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 09:03:42: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX3282118/SRX3282118.10_summits.bed INFO @ Sat, 03 Apr 2021 09:03:42: Done! pass1 - making usageList (15 chroms): 2 millis pass2 - checking and writing primary data (4554 records, 4 fields): 7 millis CompletedMACS2peakCalling INFO @ Sat, 03 Apr 2021 09:03:46: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 09:04:04: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX3282118/SRX3282118.20_peaks.xls INFO @ Sat, 03 Apr 2021 09:04:04: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX3282118/SRX3282118.20_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 09:04:04: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX3282118/SRX3282118.20_summits.bed INFO @ Sat, 03 Apr 2021 09:04:04: Done! pass1 - making usageList (13 chroms): 2 millis pass2 - checking and writing primary data (1753 records, 4 fields): 6 millis CompletedMACS2peakCalling