Job ID = 6527919 SRX = SRX326989 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2020-06-29T14:18:51 prefetch.2.10.7: 1) Downloading 'SRR942048'... 2020-06-29T14:18:51 prefetch.2.10.7: Downloading via HTTPS... 2020-06-29T14:25:47 prefetch.2.10.7: HTTPS download succeed 2020-06-29T14:25:47 prefetch.2.10.7: 1) 'SRR942048' was downloaded successfully Read 26941331 spots for SRR942048/SRR942048.sra Written 26941331 spots for SRR942048/SRR942048.sra 2020-06-29T14:28:43 prefetch.2.10.7: 1) Downloading 'SRR942049'... 2020-06-29T14:28:43 prefetch.2.10.7: Downloading via HTTPS... 2020-06-29T14:36:40 prefetch.2.10.7: HTTPS download succeed 2020-06-29T14:36:40 prefetch.2.10.7: 1) 'SRR942049' was downloaded successfully Read 19089965 spots for SRR942049/SRR942049.sra Written 19089965 spots for SRR942049/SRR942049.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:31:01 46031296 reads; of these: 46031296 (100.00%) were paired; of these: 8260924 (17.95%) aligned concordantly 0 times 27246292 (59.19%) aligned concordantly exactly 1 time 10524080 (22.86%) aligned concordantly >1 times ---- 8260924 pairs aligned concordantly 0 times; of these: 532081 (6.44%) aligned discordantly 1 time ---- 7728843 pairs aligned 0 times concordantly or discordantly; of these: 15457686 mates make up the pairs; of these: 11696714 (75.67%) aligned 0 times 2359536 (15.26%) aligned exactly 1 time 1401436 (9.07%) aligned >1 times 87.29% overall alignment rate Time searching: 01:31:01 Overall time: 01:31:01 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 36 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 3124290 / 38078175 = 0.0820 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 30 Jun 2020 02:05:03: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX326989/SRX326989.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX326989/SRX326989.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX326989/SRX326989.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX326989/SRX326989.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 30 Jun 2020 02:05:03: #1 read tag files... INFO @ Tue, 30 Jun 2020 02:05:03: #1 read treatment tags... INFO @ Tue, 30 Jun 2020 02:05:11: 1000000 INFO @ Tue, 30 Jun 2020 02:05:18: 2000000 INFO @ Tue, 30 Jun 2020 02:05:26: 3000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 30 Jun 2020 02:05:33: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX326989/SRX326989.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX326989/SRX326989.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX326989/SRX326989.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX326989/SRX326989.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 30 Jun 2020 02:05:33: #1 read tag files... INFO @ Tue, 30 Jun 2020 02:05:33: #1 read treatment tags... INFO @ Tue, 30 Jun 2020 02:05:34: 4000000 INFO @ Tue, 30 Jun 2020 02:05:43: 5000000 INFO @ Tue, 30 Jun 2020 02:05:43: 1000000 INFO @ Tue, 30 Jun 2020 02:05:51: 6000000 INFO @ Tue, 30 Jun 2020 02:05:53: 2000000 INFO @ Tue, 30 Jun 2020 02:05:59: 7000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 30 Jun 2020 02:06:02: 3000000 INFO @ Tue, 30 Jun 2020 02:06:03: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX326989/SRX326989.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX326989/SRX326989.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX326989/SRX326989.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX326989/SRX326989.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 30 Jun 2020 02:06:03: #1 read tag files... INFO @ Tue, 30 Jun 2020 02:06:03: #1 read treatment tags... INFO @ Tue, 30 Jun 2020 02:06:08: 8000000 INFO @ Tue, 30 Jun 2020 02:06:11: 4000000 INFO @ Tue, 30 Jun 2020 02:06:12: 1000000 INFO @ Tue, 30 Jun 2020 02:06:17: 9000000 INFO @ Tue, 30 Jun 2020 02:06:21: 2000000 INFO @ Tue, 30 Jun 2020 02:06:21: 5000000 INFO @ Tue, 30 Jun 2020 02:06:26: 10000000 INFO @ Tue, 30 Jun 2020 02:06:29: 3000000 INFO @ Tue, 30 Jun 2020 02:06:30: 6000000 INFO @ Tue, 30 Jun 2020 02:06:35: 11000000 INFO @ Tue, 30 Jun 2020 02:06:37: 4000000 INFO @ Tue, 30 Jun 2020 02:06:39: 7000000 INFO @ Tue, 30 Jun 2020 02:06:43: 12000000 INFO @ Tue, 30 Jun 2020 02:06:46: 5000000 INFO @ Tue, 30 Jun 2020 02:06:48: 8000000 INFO @ Tue, 30 Jun 2020 02:06:52: 13000000 INFO @ Tue, 30 Jun 2020 02:06:54: 6000000 INFO @ Tue, 30 Jun 2020 02:06:58: 9000000 INFO @ Tue, 30 Jun 2020 02:07:00: 14000000 INFO @ Tue, 30 Jun 2020 02:07:02: 7000000 INFO @ Tue, 30 Jun 2020 02:07:07: 10000000 INFO @ Tue, 30 Jun 2020 02:07:08: 15000000 INFO @ Tue, 30 Jun 2020 02:07:10: 8000000 INFO @ Tue, 30 Jun 2020 02:07:16: 16000000 INFO @ Tue, 30 Jun 2020 02:07:16: 11000000 INFO @ Tue, 30 Jun 2020 02:07:18: 9000000 INFO @ Tue, 30 Jun 2020 02:07:24: 17000000 INFO @ Tue, 30 Jun 2020 02:07:25: 12000000 INFO @ Tue, 30 Jun 2020 02:07:26: 10000000 INFO @ Tue, 30 Jun 2020 02:07:31: 18000000 INFO @ Tue, 30 Jun 2020 02:07:34: 11000000 INFO @ Tue, 30 Jun 2020 02:07:34: 13000000 INFO @ Tue, 30 Jun 2020 02:07:39: 19000000 INFO @ Tue, 30 Jun 2020 02:07:42: 12000000 INFO @ Tue, 30 Jun 2020 02:07:43: 14000000 INFO @ Tue, 30 Jun 2020 02:07:47: 20000000 INFO @ Tue, 30 Jun 2020 02:07:50: 13000000 INFO @ Tue, 30 Jun 2020 02:07:52: 15000000 INFO @ Tue, 30 Jun 2020 02:07:55: 21000000 INFO @ Tue, 30 Jun 2020 02:07:58: 14000000 INFO @ Tue, 30 Jun 2020 02:08:01: 16000000 INFO @ Tue, 30 Jun 2020 02:08:03: 22000000 INFO @ Tue, 30 Jun 2020 02:08:05: 15000000 INFO @ Tue, 30 Jun 2020 02:08:09: 17000000 INFO @ Tue, 30 Jun 2020 02:08:11: 23000000 INFO @ Tue, 30 Jun 2020 02:08:13: 16000000 INFO @ Tue, 30 Jun 2020 02:08:18: 18000000 INFO @ Tue, 30 Jun 2020 02:08:19: 24000000 INFO @ Tue, 30 Jun 2020 02:08:20: 17000000 INFO @ Tue, 30 Jun 2020 02:08:26: 19000000 INFO @ Tue, 30 Jun 2020 02:08:27: 25000000 INFO @ Tue, 30 Jun 2020 02:08:28: 18000000 INFO @ Tue, 30 Jun 2020 02:08:34: 20000000 INFO @ Tue, 30 Jun 2020 02:08:35: 26000000 INFO @ Tue, 30 Jun 2020 02:08:35: 19000000 INFO @ Tue, 30 Jun 2020 02:08:41: 21000000 INFO @ Tue, 30 Jun 2020 02:08:43: 27000000 INFO @ Tue, 30 Jun 2020 02:08:43: 20000000 INFO @ Tue, 30 Jun 2020 02:08:49: 22000000 INFO @ Tue, 30 Jun 2020 02:08:51: 28000000 INFO @ Tue, 30 Jun 2020 02:08:51: 21000000 INFO @ Tue, 30 Jun 2020 02:08:56: 23000000 INFO @ Tue, 30 Jun 2020 02:08:58: 29000000 INFO @ Tue, 30 Jun 2020 02:08:58: 22000000 INFO @ Tue, 30 Jun 2020 02:09:04: 24000000 INFO @ Tue, 30 Jun 2020 02:09:05: 30000000 INFO @ Tue, 30 Jun 2020 02:09:06: 23000000 INFO @ Tue, 30 Jun 2020 02:09:12: 25000000 INFO @ Tue, 30 Jun 2020 02:09:13: 31000000 INFO @ Tue, 30 Jun 2020 02:09:13: 24000000 INFO @ Tue, 30 Jun 2020 02:09:19: 26000000 INFO @ Tue, 30 Jun 2020 02:09:20: 32000000 INFO @ Tue, 30 Jun 2020 02:09:21: 25000000 INFO @ Tue, 30 Jun 2020 02:09:25: 27000000 INFO @ Tue, 30 Jun 2020 02:09:28: 33000000 INFO @ Tue, 30 Jun 2020 02:09:28: 26000000 INFO @ Tue, 30 Jun 2020 02:09:32: 28000000 INFO @ Tue, 30 Jun 2020 02:09:35: 34000000 INFO @ Tue, 30 Jun 2020 02:09:36: 27000000 INFO @ Tue, 30 Jun 2020 02:09:38: 29000000 INFO @ Tue, 30 Jun 2020 02:09:43: 35000000 INFO @ Tue, 30 Jun 2020 02:09:44: 28000000 INFO @ Tue, 30 Jun 2020 02:09:45: 30000000 INFO @ Tue, 30 Jun 2020 02:09:50: 36000000 INFO @ Tue, 30 Jun 2020 02:09:51: 31000000 INFO @ Tue, 30 Jun 2020 02:09:51: 29000000 INFO @ Tue, 30 Jun 2020 02:09:57: 32000000 INFO @ Tue, 30 Jun 2020 02:09:58: 37000000 INFO @ Tue, 30 Jun 2020 02:09:59: 30000000 INFO @ Tue, 30 Jun 2020 02:10:04: 33000000 INFO @ Tue, 30 Jun 2020 02:10:05: 38000000 INFO @ Tue, 30 Jun 2020 02:10:06: 31000000 INFO @ Tue, 30 Jun 2020 02:10:10: 34000000 INFO @ Tue, 30 Jun 2020 02:10:13: 39000000 INFO @ Tue, 30 Jun 2020 02:10:14: 32000000 INFO @ Tue, 30 Jun 2020 02:10:17: 35000000 INFO @ Tue, 30 Jun 2020 02:10:21: 40000000 INFO @ Tue, 30 Jun 2020 02:10:21: 33000000 INFO @ Tue, 30 Jun 2020 02:10:23: 36000000 INFO @ Tue, 30 Jun 2020 02:10:29: 41000000 INFO @ Tue, 30 Jun 2020 02:10:29: 34000000 INFO @ Tue, 30 Jun 2020 02:10:29: 37000000 INFO @ Tue, 30 Jun 2020 02:10:36: 38000000 INFO @ Tue, 30 Jun 2020 02:10:36: 42000000 INFO @ Tue, 30 Jun 2020 02:10:36: 35000000 INFO @ Tue, 30 Jun 2020 02:10:42: 39000000 INFO @ Tue, 30 Jun 2020 02:10:44: 43000000 INFO @ Tue, 30 Jun 2020 02:10:44: 36000000 INFO @ Tue, 30 Jun 2020 02:10:48: 40000000 INFO @ Tue, 30 Jun 2020 02:10:51: 44000000 INFO @ Tue, 30 Jun 2020 02:10:52: 37000000 INFO @ Tue, 30 Jun 2020 02:10:54: 41000000 INFO @ Tue, 30 Jun 2020 02:10:59: 45000000 INFO @ Tue, 30 Jun 2020 02:10:59: 38000000 INFO @ Tue, 30 Jun 2020 02:11:00: 42000000 INFO @ Tue, 30 Jun 2020 02:11:06: 43000000 INFO @ Tue, 30 Jun 2020 02:11:06: 46000000 INFO @ Tue, 30 Jun 2020 02:11:07: 39000000 INFO @ Tue, 30 Jun 2020 02:11:13: 44000000 INFO @ Tue, 30 Jun 2020 02:11:14: 47000000 INFO @ Tue, 30 Jun 2020 02:11:14: 40000000 INFO @ Tue, 30 Jun 2020 02:11:19: 45000000 INFO @ Tue, 30 Jun 2020 02:11:22: 48000000 INFO @ Tue, 30 Jun 2020 02:11:22: 41000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 30 Jun 2020 02:11:25: 46000000 INFO @ Tue, 30 Jun 2020 02:11:29: 49000000 INFO @ Tue, 30 Jun 2020 02:11:29: 42000000 INFO @ Tue, 30 Jun 2020 02:11:31: 47000000 INFO @ Tue, 30 Jun 2020 02:11:37: 50000000 INFO @ Tue, 30 Jun 2020 02:11:37: 43000000 INFO @ Tue, 30 Jun 2020 02:11:38: 48000000 INFO @ Tue, 30 Jun 2020 02:11:44: 49000000 INFO @ Tue, 30 Jun 2020 02:11:44: 51000000 INFO @ Tue, 30 Jun 2020 02:11:44: 44000000 INFO @ Tue, 30 Jun 2020 02:11:50: 50000000 INFO @ Tue, 30 Jun 2020 02:11:52: 52000000 INFO @ Tue, 30 Jun 2020 02:11:52: 45000000 INFO @ Tue, 30 Jun 2020 02:11:57: 51000000 INFO @ Tue, 30 Jun 2020 02:12:00: 53000000 INFO @ Tue, 30 Jun 2020 02:12:00: 46000000 INFO @ Tue, 30 Jun 2020 02:12:03: 52000000 INFO @ Tue, 30 Jun 2020 02:12:07: 54000000 INFO @ Tue, 30 Jun 2020 02:12:07: 47000000 INFO @ Tue, 30 Jun 2020 02:12:09: 53000000 INFO @ Tue, 30 Jun 2020 02:12:15: 55000000 INFO @ Tue, 30 Jun 2020 02:12:15: 48000000 INFO @ Tue, 30 Jun 2020 02:12:15: 54000000 INFO @ Tue, 30 Jun 2020 02:12:22: 55000000 INFO @ Tue, 30 Jun 2020 02:12:22: 56000000 INFO @ Tue, 30 Jun 2020 02:12:23: 49000000 INFO @ Tue, 30 Jun 2020 02:12:28: 56000000 INFO @ Tue, 30 Jun 2020 02:12:30: 50000000 INFO @ Tue, 30 Jun 2020 02:12:30: 57000000 INFO @ Tue, 30 Jun 2020 02:12:35: 57000000 INFO @ Tue, 30 Jun 2020 02:12:37: 51000000 INFO @ Tue, 30 Jun 2020 02:12:38: 58000000 INFO @ Tue, 30 Jun 2020 02:12:41: 58000000 INFO @ Tue, 30 Jun 2020 02:12:44: 52000000 INFO @ Tue, 30 Jun 2020 02:12:45: 59000000 INFO @ Tue, 30 Jun 2020 02:12:48: 59000000 INFO @ Tue, 30 Jun 2020 02:12:51: 53000000 INFO @ Tue, 30 Jun 2020 02:12:52: 60000000 INFO @ Tue, 30 Jun 2020 02:12:54: 60000000 INFO @ Tue, 30 Jun 2020 02:12:58: 54000000 INFO @ Tue, 30 Jun 2020 02:13:00: 61000000 INFO @ Tue, 30 Jun 2020 02:13:00: 61000000 INFO @ Tue, 30 Jun 2020 02:13:05: 55000000 INFO @ Tue, 30 Jun 2020 02:13:07: 62000000 INFO @ Tue, 30 Jun 2020 02:13:07: 62000000 INFO @ Tue, 30 Jun 2020 02:13:12: 56000000 INFO @ Tue, 30 Jun 2020 02:13:14: 63000000 INFO @ Tue, 30 Jun 2020 02:13:15: 63000000 BigWig に変換しました。 INFO @ Tue, 30 Jun 2020 02:13:20: 57000000 INFO @ Tue, 30 Jun 2020 02:13:20: 64000000 INFO @ Tue, 30 Jun 2020 02:13:23: 64000000 INFO @ Tue, 30 Jun 2020 02:13:27: 65000000 INFO @ Tue, 30 Jun 2020 02:13:28: 58000000 INFO @ Tue, 30 Jun 2020 02:13:30: 65000000 INFO @ Tue, 30 Jun 2020 02:13:33: 66000000 INFO @ Tue, 30 Jun 2020 02:13:35: 59000000 INFO @ Tue, 30 Jun 2020 02:13:38: 66000000 INFO @ Tue, 30 Jun 2020 02:13:40: 67000000 INFO @ Tue, 30 Jun 2020 02:13:43: 60000000 INFO @ Tue, 30 Jun 2020 02:13:45: 67000000 INFO @ Tue, 30 Jun 2020 02:13:46: 68000000 INFO @ Tue, 30 Jun 2020 02:13:50: 61000000 INFO @ Tue, 30 Jun 2020 02:13:53: 68000000 INFO @ Tue, 30 Jun 2020 02:13:53: 69000000 INFO @ Tue, 30 Jun 2020 02:13:57: 62000000 INFO @ Tue, 30 Jun 2020 02:14:00: 70000000 INFO @ Tue, 30 Jun 2020 02:14:00: 69000000 INFO @ Tue, 30 Jun 2020 02:14:05: 63000000 INFO @ Tue, 30 Jun 2020 02:14:06: 71000000 INFO @ Tue, 30 Jun 2020 02:14:08: 70000000 INFO @ Tue, 30 Jun 2020 02:14:12: 64000000 INFO @ Tue, 30 Jun 2020 02:14:13: 72000000 INFO @ Tue, 30 Jun 2020 02:14:15: 71000000 INFO @ Tue, 30 Jun 2020 02:14:19: 65000000 INFO @ Tue, 30 Jun 2020 02:14:20: 73000000 INFO @ Tue, 30 Jun 2020 02:14:23: 72000000 INFO @ Tue, 30 Jun 2020 02:14:27: 74000000 INFO @ Tue, 30 Jun 2020 02:14:27: 66000000 INFO @ Tue, 30 Jun 2020 02:14:28: #1 tag size is determined as 49 bps INFO @ Tue, 30 Jun 2020 02:14:28: #1 tag size = 49 INFO @ Tue, 30 Jun 2020 02:14:28: #1 total tags in treatment: 34650641 INFO @ Tue, 30 Jun 2020 02:14:28: #1 user defined the maximum tags... INFO @ Tue, 30 Jun 2020 02:14:28: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 30 Jun 2020 02:14:29: #1 tags after filtering in treatment: 25198571 INFO @ Tue, 30 Jun 2020 02:14:29: #1 Redundant rate of treatment: 0.27 INFO @ Tue, 30 Jun 2020 02:14:29: #1 finished! INFO @ Tue, 30 Jun 2020 02:14:29: #2 Build Peak Model... INFO @ Tue, 30 Jun 2020 02:14:29: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 30 Jun 2020 02:14:30: #2 number of paired peaks: 53 WARNING @ Tue, 30 Jun 2020 02:14:30: Too few paired peaks (53) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 30 Jun 2020 02:14:30: Process for pairing-model is terminated! INFO @ Tue, 30 Jun 2020 02:14:30: 73000000 cut: /home/okishinya/chipatlas/results/dm3/SRX326989/SRX326989.10_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX326989/SRX326989.10_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX326989/SRX326989.10_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX326989/SRX326989.10_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Tue, 30 Jun 2020 02:14:34: 67000000 INFO @ Tue, 30 Jun 2020 02:14:37: 74000000 INFO @ Tue, 30 Jun 2020 02:14:38: #1 tag size is determined as 49 bps INFO @ Tue, 30 Jun 2020 02:14:38: #1 tag size = 49 INFO @ Tue, 30 Jun 2020 02:14:38: #1 total tags in treatment: 34650641 INFO @ Tue, 30 Jun 2020 02:14:38: #1 user defined the maximum tags... INFO @ Tue, 30 Jun 2020 02:14:38: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 30 Jun 2020 02:14:39: #1 tags after filtering in treatment: 25198571 INFO @ Tue, 30 Jun 2020 02:14:39: #1 Redundant rate of treatment: 0.27 INFO @ Tue, 30 Jun 2020 02:14:39: #1 finished! INFO @ Tue, 30 Jun 2020 02:14:39: #2 Build Peak Model... INFO @ Tue, 30 Jun 2020 02:14:39: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 30 Jun 2020 02:14:40: 68000000 INFO @ Tue, 30 Jun 2020 02:14:41: #2 number of paired peaks: 53 WARNING @ Tue, 30 Jun 2020 02:14:41: Too few paired peaks (53) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 30 Jun 2020 02:14:41: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/dm3/SRX326989/SRX326989.05_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX326989/SRX326989.05_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX326989/SRX326989.05_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX326989/SRX326989.05_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Tue, 30 Jun 2020 02:14:47: 69000000 INFO @ Tue, 30 Jun 2020 02:14:53: 70000000 INFO @ Tue, 30 Jun 2020 02:14:59: 71000000 INFO @ Tue, 30 Jun 2020 02:15:06: 72000000 INFO @ Tue, 30 Jun 2020 02:15:13: 73000000 INFO @ Tue, 30 Jun 2020 02:15:20: 74000000 INFO @ Tue, 30 Jun 2020 02:15:21: #1 tag size is determined as 49 bps INFO @ Tue, 30 Jun 2020 02:15:21: #1 tag size = 49 INFO @ Tue, 30 Jun 2020 02:15:21: #1 total tags in treatment: 34650641 INFO @ Tue, 30 Jun 2020 02:15:21: #1 user defined the maximum tags... INFO @ Tue, 30 Jun 2020 02:15:21: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 30 Jun 2020 02:15:22: #1 tags after filtering in treatment: 25198571 INFO @ Tue, 30 Jun 2020 02:15:22: #1 Redundant rate of treatment: 0.27 INFO @ Tue, 30 Jun 2020 02:15:22: #1 finished! INFO @ Tue, 30 Jun 2020 02:15:22: #2 Build Peak Model... INFO @ Tue, 30 Jun 2020 02:15:22: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 30 Jun 2020 02:15:24: #2 number of paired peaks: 53 WARNING @ Tue, 30 Jun 2020 02:15:24: Too few paired peaks (53) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 30 Jun 2020 02:15:24: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/dm3/SRX326989/SRX326989.20_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 0 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX326989/SRX326989.20_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX326989/SRX326989.20_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX326989/SRX326989.20_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling