Job ID = 11171248 sra ファイルのダウンロード中... Completed: 2168995K bytes transferred in 86 seconds (205721K bits/sec), in 1 file. sra ファイルのダウンロードが完了しました。 Read layout: PAIRED fastq に変換中... Read 42117945 spots for /home/okishinya/chipatlas/results/dm3/SRX2659839/SRR5364412.sra Written 42117945 spots for /home/okishinya/chipatlas/results/dm3/SRX2659839/SRR5364412.sra rm: cannot remove `[DSE]RX*': そのようなファイルやディレクトリはありません rm: cannot remove `[DSE]RR*.fastq': そのようなファイルやディレクトリはありません fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:04:44 42117945 reads; of these: 42117945 (100.00%) were paired; of these: 11473753 (27.24%) aligned concordantly 0 times 27451977 (65.18%) aligned concordantly exactly 1 time 3192215 (7.58%) aligned concordantly >1 times ---- 11473753 pairs aligned concordantly 0 times; of these: 1587098 (13.83%) aligned discordantly 1 time ---- 9886655 pairs aligned 0 times concordantly or discordantly; of these: 19773310 mates make up the pairs; of these: 17629520 (89.16%) aligned 0 times 1600688 (8.10%) aligned exactly 1 time 543102 (2.75%) aligned >1 times 79.07% overall alignment rate Time searching: 01:04:45 Overall time: 01:04:45 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 28 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 6162199 / 31829443 = 0.1936 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Sat, 08 Sep 2018 14:45:17: # Command line: callpeak -t SRX2659839.bam -f BAM -g dm -n SRX2659839.20 -q 1e-20 # ARGUMENTS LIST: # name = SRX2659839.20 # format = BAM # ChIP-seq file = ['SRX2659839.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 08 Sep 2018 14:45:17: #1 read tag files... INFO @ Sat, 08 Sep 2018 14:45:17: #1 read treatment tags... INFO @ Sat, 08 Sep 2018 14:45:17: # Command line: callpeak -t SRX2659839.bam -f BAM -g dm -n SRX2659839.05 -q 1e-05 # ARGUMENTS LIST: # name = SRX2659839.05 # format = BAM # ChIP-seq file = ['SRX2659839.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 08 Sep 2018 14:45:17: #1 read tag files... INFO @ Sat, 08 Sep 2018 14:45:17: #1 read treatment tags... INFO @ Sat, 08 Sep 2018 14:45:17: # Command line: callpeak -t SRX2659839.bam -f BAM -g dm -n SRX2659839.10 -q 1e-10 # ARGUMENTS LIST: # name = SRX2659839.10 # format = BAM # ChIP-seq file = ['SRX2659839.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 08 Sep 2018 14:45:17: #1 read tag files... INFO @ Sat, 08 Sep 2018 14:45:17: #1 read treatment tags... INFO @ Sat, 08 Sep 2018 14:45:23: 1000000 INFO @ Sat, 08 Sep 2018 14:45:23: 1000000 INFO @ Sat, 08 Sep 2018 14:45:23: 1000000 INFO @ Sat, 08 Sep 2018 14:45:29: 2000000 INFO @ Sat, 08 Sep 2018 14:45:29: 2000000 INFO @ Sat, 08 Sep 2018 14:45:29: 2000000 INFO @ Sat, 08 Sep 2018 14:45:35: 3000000 INFO @ Sat, 08 Sep 2018 14:45:35: 3000000 INFO @ Sat, 08 Sep 2018 14:45:35: 3000000 INFO @ Sat, 08 Sep 2018 14:45:41: 4000000 INFO @ Sat, 08 Sep 2018 14:45:42: 4000000 INFO @ Sat, 08 Sep 2018 14:45:42: 4000000 INFO @ Sat, 08 Sep 2018 14:45:47: 5000000 INFO @ Sat, 08 Sep 2018 14:45:48: 5000000 INFO @ Sat, 08 Sep 2018 14:45:48: 5000000 INFO @ Sat, 08 Sep 2018 14:45:53: 6000000 INFO @ Sat, 08 Sep 2018 14:45:54: 6000000 INFO @ Sat, 08 Sep 2018 14:45:54: 6000000 INFO @ Sat, 08 Sep 2018 14:45:59: 7000000 INFO @ Sat, 08 Sep 2018 14:46:00: 7000000 INFO @ Sat, 08 Sep 2018 14:46:00: 7000000 INFO @ Sat, 08 Sep 2018 14:46:05: 8000000 INFO @ Sat, 08 Sep 2018 14:46:06: 8000000 INFO @ Sat, 08 Sep 2018 14:46:06: 8000000 INFO @ Sat, 08 Sep 2018 14:46:11: 9000000 INFO @ Sat, 08 Sep 2018 14:46:12: 9000000 INFO @ Sat, 08 Sep 2018 14:46:12: 9000000 INFO @ Sat, 08 Sep 2018 14:46:17: 10000000 INFO @ Sat, 08 Sep 2018 14:46:18: 10000000 INFO @ Sat, 08 Sep 2018 14:46:19: 10000000 INFO @ Sat, 08 Sep 2018 14:46:23: 11000000 INFO @ Sat, 08 Sep 2018 14:46:24: 11000000 INFO @ Sat, 08 Sep 2018 14:46:25: 11000000 INFO @ Sat, 08 Sep 2018 14:46:28: 12000000 INFO @ Sat, 08 Sep 2018 14:46:30: 12000000 INFO @ Sat, 08 Sep 2018 14:46:31: 12000000 INFO @ Sat, 08 Sep 2018 14:46:34: 13000000 INFO @ Sat, 08 Sep 2018 14:46:37: 13000000 INFO @ Sat, 08 Sep 2018 14:46:38: 13000000 INFO @ Sat, 08 Sep 2018 14:46:40: 14000000 INFO @ Sat, 08 Sep 2018 14:46:43: 14000000 INFO @ Sat, 08 Sep 2018 14:46:44: 14000000 INFO @ Sat, 08 Sep 2018 14:46:46: 15000000 INFO @ Sat, 08 Sep 2018 14:46:49: 15000000 INFO @ Sat, 08 Sep 2018 14:46:50: 15000000 INFO @ Sat, 08 Sep 2018 14:46:52: 16000000 INFO @ Sat, 08 Sep 2018 14:46:55: 16000000 INFO @ Sat, 08 Sep 2018 14:46:57: 16000000 INFO @ Sat, 08 Sep 2018 14:46:58: 17000000 INFO @ Sat, 08 Sep 2018 14:47:01: 17000000 INFO @ Sat, 08 Sep 2018 14:47:03: 17000000 INFO @ Sat, 08 Sep 2018 14:47:04: 18000000 INFO @ Sat, 08 Sep 2018 14:47:07: 18000000 INFO @ Sat, 08 Sep 2018 14:47:09: 18000000 INFO @ Sat, 08 Sep 2018 14:47:10: 19000000 INFO @ Sat, 08 Sep 2018 14:47:13: 19000000 INFO @ Sat, 08 Sep 2018 14:47:16: 19000000 INFO @ Sat, 08 Sep 2018 14:47:16: 20000000 INFO @ Sat, 08 Sep 2018 14:47:20: 20000000 INFO @ Sat, 08 Sep 2018 14:47:22: 21000000 INFO @ Sat, 08 Sep 2018 14:47:22: 20000000 INFO @ Sat, 08 Sep 2018 14:47:26: 21000000 INFO @ Sat, 08 Sep 2018 14:47:28: 22000000 INFO @ Sat, 08 Sep 2018 14:47:28: 21000000 INFO @ Sat, 08 Sep 2018 14:47:32: 22000000 INFO @ Sat, 08 Sep 2018 14:47:34: 23000000 INFO @ Sat, 08 Sep 2018 14:47:35: 22000000 INFO @ Sat, 08 Sep 2018 14:47:38: 23000000 INFO @ Sat, 08 Sep 2018 14:47:40: 24000000 INFO @ Sat, 08 Sep 2018 14:47:41: 23000000 INFO @ Sat, 08 Sep 2018 14:47:45: 24000000 INFO @ Sat, 08 Sep 2018 14:47:46: 25000000 INFO @ Sat, 08 Sep 2018 14:47:47: 24000000 INFO @ Sat, 08 Sep 2018 14:47:51: 25000000 INFO @ Sat, 08 Sep 2018 14:47:52: 26000000 INFO @ Sat, 08 Sep 2018 14:47:53: 25000000 INFO @ Sat, 08 Sep 2018 14:47:58: 26000000 INFO @ Sat, 08 Sep 2018 14:47:58: 27000000 INFO @ Sat, 08 Sep 2018 14:47:59: 26000000 INFO @ Sat, 08 Sep 2018 14:48:04: 27000000 INFO @ Sat, 08 Sep 2018 14:48:04: 28000000 INFO @ Sat, 08 Sep 2018 14:48:06: 27000000 INFO @ Sat, 08 Sep 2018 14:48:10: 28000000 INFO @ Sat, 08 Sep 2018 14:48:11: 29000000 INFO @ Sat, 08 Sep 2018 14:48:12: 28000000 INFO @ Sat, 08 Sep 2018 14:48:16: 29000000 INFO @ Sat, 08 Sep 2018 14:48:17: 30000000 INFO @ Sat, 08 Sep 2018 14:48:18: 29000000 INFO @ Sat, 08 Sep 2018 14:48:22: 30000000 INFO @ Sat, 08 Sep 2018 14:48:23: 31000000 INFO @ Sat, 08 Sep 2018 14:48:25: 30000000 INFO @ Sat, 08 Sep 2018 14:48:28: 31000000 INFO @ Sat, 08 Sep 2018 14:48:29: 32000000 INFO @ Sat, 08 Sep 2018 14:48:31: 31000000 INFO @ Sat, 08 Sep 2018 14:48:34: 32000000 INFO @ Sat, 08 Sep 2018 14:48:35: 33000000 INFO @ Sat, 08 Sep 2018 14:48:37: 32000000 INFO @ Sat, 08 Sep 2018 14:48:40: 33000000 INFO @ Sat, 08 Sep 2018 14:48:41: 34000000 INFO @ Sat, 08 Sep 2018 14:48:43: 33000000 INFO @ Sat, 08 Sep 2018 14:48:46: 34000000 INFO @ Sat, 08 Sep 2018 14:48:48: 35000000 INFO @ Sat, 08 Sep 2018 14:48:50: 34000000 INFO @ Sat, 08 Sep 2018 14:48:52: 35000000 INFO @ Sat, 08 Sep 2018 14:48:54: 36000000 INFO @ Sat, 08 Sep 2018 14:48:57: 35000000 INFO @ Sat, 08 Sep 2018 14:48:59: 36000000 INFO @ Sat, 08 Sep 2018 14:49:00: 37000000 INFO @ Sat, 08 Sep 2018 14:49:04: 36000000 INFO @ Sat, 08 Sep 2018 14:49:05: 37000000 INFO @ Sat, 08 Sep 2018 14:49:07: 38000000 INFO @ Sat, 08 Sep 2018 14:49:11: 37000000 INFO @ Sat, 08 Sep 2018 14:49:12: 38000000 INFO @ Sat, 08 Sep 2018 14:49:13: 39000000 INFO @ Sat, 08 Sep 2018 14:49:17: 38000000 INFO @ Sat, 08 Sep 2018 14:49:18: 39000000 INFO @ Sat, 08 Sep 2018 14:49:19: 40000000 INFO @ Sat, 08 Sep 2018 14:49:23: 39000000 INFO @ Sat, 08 Sep 2018 14:49:24: 40000000 INFO @ Sat, 08 Sep 2018 14:49:25: 41000000 INFO @ Sat, 08 Sep 2018 14:49:28: 40000000 INFO @ Sat, 08 Sep 2018 14:49:30: 41000000 INFO @ Sat, 08 Sep 2018 14:49:31: 42000000 INFO @ Sat, 08 Sep 2018 14:49:34: 41000000 INFO @ Sat, 08 Sep 2018 14:49:36: 42000000 INFO @ Sat, 08 Sep 2018 14:49:37: 43000000 INFO @ Sat, 08 Sep 2018 14:49:40: 42000000 INFO @ Sat, 08 Sep 2018 14:49:42: 43000000 INFO @ Sat, 08 Sep 2018 14:49:43: 44000000 INFO @ Sat, 08 Sep 2018 14:49:46: 43000000 INFO @ Sat, 08 Sep 2018 14:49:49: 44000000 INFO @ Sat, 08 Sep 2018 14:49:49: 45000000 INFO @ Sat, 08 Sep 2018 14:49:52: 44000000 INFO @ Sat, 08 Sep 2018 14:49:55: 45000000 INFO @ Sat, 08 Sep 2018 14:49:55: 46000000 INFO @ Sat, 08 Sep 2018 14:49:58: 45000000 INFO @ Sat, 08 Sep 2018 14:50:01: 46000000 INFO @ Sat, 08 Sep 2018 14:50:01: 47000000 INFO @ Sat, 08 Sep 2018 14:50:04: 46000000 INFO @ Sat, 08 Sep 2018 14:50:07: 47000000 INFO @ Sat, 08 Sep 2018 14:50:07: 48000000 INFO @ Sat, 08 Sep 2018 14:50:10: 47000000 INFO @ Sat, 08 Sep 2018 14:50:13: 48000000 INFO @ Sat, 08 Sep 2018 14:50:13: 49000000 INFO @ Sat, 08 Sep 2018 14:50:16: 48000000 INFO @ Sat, 08 Sep 2018 14:50:20: 50000000 INFO @ Sat, 08 Sep 2018 14:50:20: 49000000 INFO @ Sat, 08 Sep 2018 14:50:22: 49000000 INFO @ Sat, 08 Sep 2018 14:50:26: 51000000 INFO @ Sat, 08 Sep 2018 14:50:26: 50000000 INFO @ Sat, 08 Sep 2018 14:50:28: 50000000 INFO @ Sat, 08 Sep 2018 14:50:31: 52000000 INFO @ Sat, 08 Sep 2018 14:50:32: 51000000 INFO @ Sat, 08 Sep 2018 14:50:34: 51000000 INFO @ Sat, 08 Sep 2018 14:50:37: 53000000 INFO @ Sat, 08 Sep 2018 14:50:38: 52000000 INFO @ Sat, 08 Sep 2018 14:50:40: 52000000 INFO @ Sat, 08 Sep 2018 14:50:44: 54000000 INFO @ Sat, 08 Sep 2018 14:50:45: 53000000 INFO @ Sat, 08 Sep 2018 14:50:46: #1 tag size is determined as 76 bps INFO @ Sat, 08 Sep 2018 14:50:46: #1 tag size = 76 INFO @ Sat, 08 Sep 2018 14:50:46: #1 total tags in treatment: 24829068 INFO @ Sat, 08 Sep 2018 14:50:46: #1 user defined the maximum tags... INFO @ Sat, 08 Sep 2018 14:50:46: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 08 Sep 2018 14:50:47: #1 tags after filtering in treatment: 18978475 INFO @ Sat, 08 Sep 2018 14:50:47: #1 Redundant rate of treatment: 0.24 INFO @ Sat, 08 Sep 2018 14:50:47: #1 finished! INFO @ Sat, 08 Sep 2018 14:50:47: #2 Build Peak Model... INFO @ Sat, 08 Sep 2018 14:50:47: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 08 Sep 2018 14:50:47: 53000000 INFO @ Sat, 08 Sep 2018 14:50:48: #2 number of paired peaks: 2921 INFO @ Sat, 08 Sep 2018 14:50:48: start model_add_line... INFO @ Sat, 08 Sep 2018 14:50:49: start X-correlation... INFO @ Sat, 08 Sep 2018 14:50:49: end of X-cor INFO @ Sat, 08 Sep 2018 14:50:49: #2 finished! INFO @ Sat, 08 Sep 2018 14:50:49: #2 predicted fragment length is 90 bps INFO @ Sat, 08 Sep 2018 14:50:49: #2 alternative fragment length(s) may be 90 bps INFO @ Sat, 08 Sep 2018 14:50:49: #2.2 Generate R script for model : SRX2659839.20_model.r WARNING @ Sat, 08 Sep 2018 14:50:49: #2 Since the d (90) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 08 Sep 2018 14:50:49: #2 You may need to consider one of the other alternative d(s): 90 WARNING @ Sat, 08 Sep 2018 14:50:49: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 08 Sep 2018 14:50:49: #3 Call peaks... INFO @ Sat, 08 Sep 2018 14:50:49: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 08 Sep 2018 14:50:51: 54000000 INFO @ Sat, 08 Sep 2018 14:50:53: #1 tag size is determined as 76 bps INFO @ Sat, 08 Sep 2018 14:50:53: #1 tag size = 76 INFO @ Sat, 08 Sep 2018 14:50:53: #1 total tags in treatment: 24829068 INFO @ Sat, 08 Sep 2018 14:50:53: #1 user defined the maximum tags... INFO @ Sat, 08 Sep 2018 14:50:53: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 08 Sep 2018 14:50:54: 54000000 INFO @ Sat, 08 Sep 2018 14:50:54: #1 tags after filtering in treatment: 18978475 INFO @ Sat, 08 Sep 2018 14:50:54: #1 Redundant rate of treatment: 0.24 INFO @ Sat, 08 Sep 2018 14:50:54: #1 finished! INFO @ Sat, 08 Sep 2018 14:50:54: #2 Build Peak Model... INFO @ Sat, 08 Sep 2018 14:50:54: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 08 Sep 2018 14:50:55: #2 number of paired peaks: 2921 INFO @ Sat, 08 Sep 2018 14:50:55: start model_add_line... INFO @ Sat, 08 Sep 2018 14:50:56: #1 tag size is determined as 76 bps INFO @ Sat, 08 Sep 2018 14:50:56: #1 tag size = 76 INFO @ Sat, 08 Sep 2018 14:50:56: #1 total tags in treatment: 24829068 INFO @ Sat, 08 Sep 2018 14:50:56: #1 user defined the maximum tags... INFO @ Sat, 08 Sep 2018 14:50:56: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 08 Sep 2018 14:50:56: start X-correlation... INFO @ Sat, 08 Sep 2018 14:50:56: end of X-cor INFO @ Sat, 08 Sep 2018 14:50:56: #2 finished! INFO @ Sat, 08 Sep 2018 14:50:56: #2 predicted fragment length is 90 bps INFO @ Sat, 08 Sep 2018 14:50:56: #2 alternative fragment length(s) may be 90 bps INFO @ Sat, 08 Sep 2018 14:50:56: #2.2 Generate R script for model : SRX2659839.05_model.r WARNING @ Sat, 08 Sep 2018 14:50:56: #2 Since the d (90) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 08 Sep 2018 14:50:56: #2 You may need to consider one of the other alternative d(s): 90 WARNING @ Sat, 08 Sep 2018 14:50:56: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 08 Sep 2018 14:50:56: #3 Call peaks... INFO @ Sat, 08 Sep 2018 14:50:56: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 08 Sep 2018 14:50:56: #1 tags after filtering in treatment: 18978475 INFO @ Sat, 08 Sep 2018 14:50:56: #1 Redundant rate of treatment: 0.24 INFO @ Sat, 08 Sep 2018 14:50:56: #1 finished! INFO @ Sat, 08 Sep 2018 14:50:56: #2 Build Peak Model... INFO @ Sat, 08 Sep 2018 14:50:56: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 08 Sep 2018 14:50:58: #2 number of paired peaks: 2921 INFO @ Sat, 08 Sep 2018 14:50:58: start model_add_line... INFO @ Sat, 08 Sep 2018 14:50:58: start X-correlation... INFO @ Sat, 08 Sep 2018 14:50:58: end of X-cor INFO @ Sat, 08 Sep 2018 14:50:58: #2 finished! INFO @ Sat, 08 Sep 2018 14:50:58: #2 predicted fragment length is 90 bps INFO @ Sat, 08 Sep 2018 14:50:58: #2 alternative fragment length(s) may be 90 bps INFO @ Sat, 08 Sep 2018 14:50:58: #2.2 Generate R script for model : SRX2659839.10_model.r WARNING @ Sat, 08 Sep 2018 14:50:58: #2 Since the d (90) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 08 Sep 2018 14:50:58: #2 You may need to consider one of the other alternative d(s): 90 WARNING @ Sat, 08 Sep 2018 14:50:58: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 08 Sep 2018 14:50:58: #3 Call peaks... INFO @ Sat, 08 Sep 2018 14:50:58: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 08 Sep 2018 14:51:32: #3 Call peaks for each chromosome... INFO @ Sat, 08 Sep 2018 14:51:41: #3 Call peaks for each chromosome... INFO @ Sat, 08 Sep 2018 14:51:42: #3 Call peaks for each chromosome... INFO @ Sat, 08 Sep 2018 14:51:57: #4 Write output xls file... SRX2659839.20_peaks.xls INFO @ Sat, 08 Sep 2018 14:51:57: #4 Write peak in narrowPeak format file... SRX2659839.20_peaks.narrowPeak INFO @ Sat, 08 Sep 2018 14:51:57: #4 Write summits bed file... SRX2659839.20_summits.bed INFO @ Sat, 08 Sep 2018 14:51:57: Done! pass1 - making usageList (13 chroms): 2 millis pass2 - checking and writing primary data (10003 records, 4 fields): 13 millis CompletedMACS2peakCalling INFO @ Sat, 08 Sep 2018 14:52:07: #4 Write output xls file... SRX2659839.05_peaks.xls INFO @ Sat, 08 Sep 2018 14:52:08: #4 Write peak in narrowPeak format file... SRX2659839.05_peaks.narrowPeak INFO @ Sat, 08 Sep 2018 14:52:08: #4 Write output xls file... SRX2659839.10_peaks.xls INFO @ Sat, 08 Sep 2018 14:52:08: #4 Write summits bed file... SRX2659839.05_summits.bed INFO @ Sat, 08 Sep 2018 14:52:08: #4 Write peak in narrowPeak format file... SRX2659839.10_peaks.narrowPeak INFO @ Sat, 08 Sep 2018 14:52:08: Done! INFO @ Sat, 08 Sep 2018 14:52:08: #4 Write summits bed file... SRX2659839.10_summits.bed INFO @ Sat, 08 Sep 2018 14:52:08: Done! pass1 - making usageList (14 chroms): 4 millis pass2 - checking and writing primary data (20719 records, 4 fields): 25 millis pass1 - making usageList (13 chroms): 4 millis CompletedMACS2peakCalling pass2 - checking and writing primary data (15963 records, 4 fields): 19 millis CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。