Job ID = 6527596 SRX = SRX127432 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2020-06-29T13:12:03 prefetch.2.10.7: 1) Downloading 'SRR438679'... 2020-06-29T13:12:03 prefetch.2.10.7: Downloading via HTTPS... 2020-06-29T13:22:39 prefetch.2.10.7: HTTPS download succeed 2020-06-29T13:22:39 prefetch.2.10.7: 1) 'SRR438679' was downloaded successfully Read 45270926 spots for SRR438679/SRR438679.sra Written 45270926 spots for SRR438679/SRR438679.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:01:37 45270926 reads; of these: 45270926 (100.00%) were paired; of these: 8612351 (19.02%) aligned concordantly 0 times 26498093 (58.53%) aligned concordantly exactly 1 time 10160482 (22.44%) aligned concordantly >1 times ---- 8612351 pairs aligned concordantly 0 times; of these: 490678 (5.70%) aligned discordantly 1 time ---- 8121673 pairs aligned 0 times concordantly or discordantly; of these: 16243346 mates make up the pairs; of these: 14356680 (88.38%) aligned 0 times 1053856 (6.49%) aligned exactly 1 time 832810 (5.13%) aligned >1 times 84.14% overall alignment rate Time searching: 01:01:37 Overall time: 01:01:37 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 24 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 1202305 / 36848935 = 0.0326 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 30 Jun 2020 00:02:50: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX127432/SRX127432.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX127432/SRX127432.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX127432/SRX127432.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX127432/SRX127432.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 30 Jun 2020 00:02:50: #1 read tag files... INFO @ Tue, 30 Jun 2020 00:02:50: #1 read treatment tags... INFO @ Tue, 30 Jun 2020 00:02:55: 1000000 INFO @ Tue, 30 Jun 2020 00:02:59: 2000000 INFO @ Tue, 30 Jun 2020 00:03:04: 3000000 INFO @ Tue, 30 Jun 2020 00:03:09: 4000000 INFO @ Tue, 30 Jun 2020 00:03:14: 5000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 30 Jun 2020 00:03:18: 6000000 INFO @ Tue, 30 Jun 2020 00:03:20: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX127432/SRX127432.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX127432/SRX127432.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX127432/SRX127432.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX127432/SRX127432.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 30 Jun 2020 00:03:20: #1 read tag files... INFO @ Tue, 30 Jun 2020 00:03:20: #1 read treatment tags... INFO @ Tue, 30 Jun 2020 00:03:23: 7000000 INFO @ Tue, 30 Jun 2020 00:03:25: 1000000 INFO @ Tue, 30 Jun 2020 00:03:29: 8000000 INFO @ Tue, 30 Jun 2020 00:03:30: 2000000 INFO @ Tue, 30 Jun 2020 00:03:34: 9000000 INFO @ Tue, 30 Jun 2020 00:03:35: 3000000 INFO @ Tue, 30 Jun 2020 00:03:39: 10000000 INFO @ Tue, 30 Jun 2020 00:03:40: 4000000 INFO @ Tue, 30 Jun 2020 00:03:44: 11000000 INFO @ Tue, 30 Jun 2020 00:03:45: 5000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 30 Jun 2020 00:03:49: 12000000 INFO @ Tue, 30 Jun 2020 00:03:50: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX127432/SRX127432.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX127432/SRX127432.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX127432/SRX127432.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX127432/SRX127432.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 30 Jun 2020 00:03:50: #1 read tag files... INFO @ Tue, 30 Jun 2020 00:03:50: #1 read treatment tags... INFO @ Tue, 30 Jun 2020 00:03:50: 6000000 INFO @ Tue, 30 Jun 2020 00:03:54: 13000000 INFO @ Tue, 30 Jun 2020 00:03:55: 1000000 INFO @ Tue, 30 Jun 2020 00:03:56: 7000000 INFO @ Tue, 30 Jun 2020 00:04:00: 14000000 INFO @ Tue, 30 Jun 2020 00:04:01: 2000000 INFO @ Tue, 30 Jun 2020 00:04:01: 8000000 INFO @ Tue, 30 Jun 2020 00:04:05: 15000000 INFO @ Tue, 30 Jun 2020 00:04:06: 9000000 INFO @ Tue, 30 Jun 2020 00:04:07: 3000000 INFO @ Tue, 30 Jun 2020 00:04:11: 16000000 INFO @ Tue, 30 Jun 2020 00:04:12: 10000000 INFO @ Tue, 30 Jun 2020 00:04:12: 4000000 INFO @ Tue, 30 Jun 2020 00:04:16: 17000000 INFO @ Tue, 30 Jun 2020 00:04:17: 11000000 INFO @ Tue, 30 Jun 2020 00:04:18: 5000000 INFO @ Tue, 30 Jun 2020 00:04:21: 18000000 INFO @ Tue, 30 Jun 2020 00:04:23: 12000000 INFO @ Tue, 30 Jun 2020 00:04:23: 6000000 INFO @ Tue, 30 Jun 2020 00:04:27: 19000000 INFO @ Tue, 30 Jun 2020 00:04:28: 13000000 INFO @ Tue, 30 Jun 2020 00:04:29: 7000000 INFO @ Tue, 30 Jun 2020 00:04:32: 20000000 INFO @ Tue, 30 Jun 2020 00:04:34: 14000000 INFO @ Tue, 30 Jun 2020 00:04:34: 8000000 INFO @ Tue, 30 Jun 2020 00:04:37: 21000000 INFO @ Tue, 30 Jun 2020 00:04:39: 15000000 INFO @ Tue, 30 Jun 2020 00:04:40: 9000000 INFO @ Tue, 30 Jun 2020 00:04:43: 22000000 INFO @ Tue, 30 Jun 2020 00:04:44: 16000000 INFO @ Tue, 30 Jun 2020 00:04:45: 10000000 INFO @ Tue, 30 Jun 2020 00:04:48: 23000000 INFO @ Tue, 30 Jun 2020 00:04:50: 17000000 INFO @ Tue, 30 Jun 2020 00:04:50: 11000000 INFO @ Tue, 30 Jun 2020 00:04:53: 24000000 INFO @ Tue, 30 Jun 2020 00:04:55: 18000000 INFO @ Tue, 30 Jun 2020 00:04:56: 12000000 INFO @ Tue, 30 Jun 2020 00:04:59: 25000000 INFO @ Tue, 30 Jun 2020 00:05:00: 19000000 INFO @ Tue, 30 Jun 2020 00:05:01: 13000000 INFO @ Tue, 30 Jun 2020 00:05:04: 26000000 INFO @ Tue, 30 Jun 2020 00:05:06: 20000000 INFO @ Tue, 30 Jun 2020 00:05:06: 14000000 INFO @ Tue, 30 Jun 2020 00:05:09: 27000000 INFO @ Tue, 30 Jun 2020 00:05:11: 21000000 INFO @ Tue, 30 Jun 2020 00:05:12: 15000000 INFO @ Tue, 30 Jun 2020 00:05:14: 28000000 INFO @ Tue, 30 Jun 2020 00:05:16: 22000000 INFO @ Tue, 30 Jun 2020 00:05:17: 16000000 INFO @ Tue, 30 Jun 2020 00:05:20: 29000000 INFO @ Tue, 30 Jun 2020 00:05:22: 23000000 INFO @ Tue, 30 Jun 2020 00:05:23: 17000000 INFO @ Tue, 30 Jun 2020 00:05:25: 30000000 INFO @ Tue, 30 Jun 2020 00:05:27: 24000000 INFO @ Tue, 30 Jun 2020 00:05:28: 18000000 INFO @ Tue, 30 Jun 2020 00:05:30: 31000000 INFO @ Tue, 30 Jun 2020 00:05:32: 25000000 INFO @ Tue, 30 Jun 2020 00:05:33: 19000000 INFO @ Tue, 30 Jun 2020 00:05:36: 32000000 INFO @ Tue, 30 Jun 2020 00:05:38: 26000000 INFO @ Tue, 30 Jun 2020 00:05:39: 20000000 INFO @ Tue, 30 Jun 2020 00:05:41: 33000000 INFO @ Tue, 30 Jun 2020 00:05:43: 27000000 INFO @ Tue, 30 Jun 2020 00:05:44: 21000000 INFO @ Tue, 30 Jun 2020 00:05:47: 34000000 INFO @ Tue, 30 Jun 2020 00:05:48: 28000000 INFO @ Tue, 30 Jun 2020 00:05:51: 22000000 INFO @ Tue, 30 Jun 2020 00:05:52: 35000000 INFO @ Tue, 30 Jun 2020 00:05:54: 29000000 INFO @ Tue, 30 Jun 2020 00:05:56: 23000000 INFO @ Tue, 30 Jun 2020 00:05:58: 36000000 INFO @ Tue, 30 Jun 2020 00:05:59: 30000000 INFO @ Tue, 30 Jun 2020 00:06:02: 24000000 INFO @ Tue, 30 Jun 2020 00:06:03: 37000000 INFO @ Tue, 30 Jun 2020 00:06:04: 31000000 INFO @ Tue, 30 Jun 2020 00:06:07: 25000000 INFO @ Tue, 30 Jun 2020 00:06:09: 38000000 INFO @ Tue, 30 Jun 2020 00:06:10: 32000000 INFO @ Tue, 30 Jun 2020 00:06:13: 26000000 INFO @ Tue, 30 Jun 2020 00:06:14: 39000000 INFO @ Tue, 30 Jun 2020 00:06:15: 33000000 INFO @ Tue, 30 Jun 2020 00:06:18: 27000000 INFO @ Tue, 30 Jun 2020 00:06:20: 40000000 INFO @ Tue, 30 Jun 2020 00:06:20: 34000000 INFO @ Tue, 30 Jun 2020 00:06:23: 28000000 INFO @ Tue, 30 Jun 2020 00:06:25: 41000000 INFO @ Tue, 30 Jun 2020 00:06:26: 35000000 INFO @ Tue, 30 Jun 2020 00:06:29: 29000000 INFO @ Tue, 30 Jun 2020 00:06:31: 42000000 INFO @ Tue, 30 Jun 2020 00:06:31: 36000000 INFO @ Tue, 30 Jun 2020 00:06:35: 30000000 INFO @ Tue, 30 Jun 2020 00:06:36: 43000000 INFO @ Tue, 30 Jun 2020 00:06:36: 37000000 INFO @ Tue, 30 Jun 2020 00:06:40: 31000000 INFO @ Tue, 30 Jun 2020 00:06:42: 44000000 INFO @ Tue, 30 Jun 2020 00:06:42: 38000000 INFO @ Tue, 30 Jun 2020 00:06:46: 32000000 INFO @ Tue, 30 Jun 2020 00:06:47: 39000000 INFO @ Tue, 30 Jun 2020 00:06:47: 45000000 INFO @ Tue, 30 Jun 2020 00:06:51: 33000000 INFO @ Tue, 30 Jun 2020 00:06:52: 40000000 INFO @ Tue, 30 Jun 2020 00:06:52: 46000000 INFO @ Tue, 30 Jun 2020 00:06:58: 34000000 INFO @ Tue, 30 Jun 2020 00:06:58: 41000000 INFO @ Tue, 30 Jun 2020 00:06:58: 47000000 INFO @ Tue, 30 Jun 2020 00:07:03: 42000000 INFO @ Tue, 30 Jun 2020 00:07:03: 48000000 INFO @ Tue, 30 Jun 2020 00:07:04: 35000000 INFO @ Tue, 30 Jun 2020 00:07:09: 43000000 INFO @ Tue, 30 Jun 2020 00:07:09: 49000000 INFO @ Tue, 30 Jun 2020 00:07:10: 36000000 INFO @ Tue, 30 Jun 2020 00:07:14: 44000000 INFO @ Tue, 30 Jun 2020 00:07:14: 50000000 INFO @ Tue, 30 Jun 2020 00:07:16: 37000000 INFO @ Tue, 30 Jun 2020 00:07:19: 45000000 INFO @ Tue, 30 Jun 2020 00:07:20: 51000000 INFO @ Tue, 30 Jun 2020 00:07:22: 38000000 INFO @ Tue, 30 Jun 2020 00:07:25: 46000000 INFO @ Tue, 30 Jun 2020 00:07:25: 52000000 INFO @ Tue, 30 Jun 2020 00:07:28: 39000000 INFO @ Tue, 30 Jun 2020 00:07:30: 47000000 INFO @ Tue, 30 Jun 2020 00:07:31: 53000000 INFO @ Tue, 30 Jun 2020 00:07:35: 40000000 INFO @ Tue, 30 Jun 2020 00:07:36: 48000000 INFO @ Tue, 30 Jun 2020 00:07:36: 54000000 INFO @ Tue, 30 Jun 2020 00:07:41: 41000000 INFO @ Tue, 30 Jun 2020 00:07:41: 49000000 INFO @ Tue, 30 Jun 2020 00:07:42: 55000000 INFO @ Tue, 30 Jun 2020 00:07:46: 50000000 INFO @ Tue, 30 Jun 2020 00:07:47: 42000000 INFO @ Tue, 30 Jun 2020 00:07:47: 56000000 INFO @ Tue, 30 Jun 2020 00:07:52: 51000000 INFO @ Tue, 30 Jun 2020 00:07:53: 57000000 INFO @ Tue, 30 Jun 2020 00:07:53: 43000000 INFO @ Tue, 30 Jun 2020 00:07:57: 52000000 INFO @ Tue, 30 Jun 2020 00:07:58: 58000000 INFO @ Tue, 30 Jun 2020 00:07:59: 44000000 INFO @ Tue, 30 Jun 2020 00:08:03: 53000000 INFO @ Tue, 30 Jun 2020 00:08:04: 59000000 INFO @ Tue, 30 Jun 2020 00:08:05: 45000000 INFO @ Tue, 30 Jun 2020 00:08:08: 54000000 INFO @ Tue, 30 Jun 2020 00:08:09: 60000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 30 Jun 2020 00:08:11: 46000000 INFO @ Tue, 30 Jun 2020 00:08:14: 55000000 INFO @ Tue, 30 Jun 2020 00:08:15: 61000000 INFO @ Tue, 30 Jun 2020 00:08:16: 47000000 INFO @ Tue, 30 Jun 2020 00:08:19: 56000000 INFO @ Tue, 30 Jun 2020 00:08:20: 62000000 INFO @ Tue, 30 Jun 2020 00:08:22: 48000000 INFO @ Tue, 30 Jun 2020 00:08:25: 57000000 INFO @ Tue, 30 Jun 2020 00:08:26: 63000000 INFO @ Tue, 30 Jun 2020 00:08:28: 49000000 INFO @ Tue, 30 Jun 2020 00:08:30: 58000000 INFO @ Tue, 30 Jun 2020 00:08:31: 64000000 INFO @ Tue, 30 Jun 2020 00:08:34: 50000000 INFO @ Tue, 30 Jun 2020 00:08:36: 59000000 INFO @ Tue, 30 Jun 2020 00:08:37: 65000000 INFO @ Tue, 30 Jun 2020 00:08:40: 51000000 INFO @ Tue, 30 Jun 2020 00:08:41: 60000000 INFO @ Tue, 30 Jun 2020 00:08:42: 66000000 INFO @ Tue, 30 Jun 2020 00:08:45: 52000000 INFO @ Tue, 30 Jun 2020 00:08:47: 61000000 INFO @ Tue, 30 Jun 2020 00:08:48: 67000000 INFO @ Tue, 30 Jun 2020 00:08:51: 53000000 INFO @ Tue, 30 Jun 2020 00:08:52: 62000000 INFO @ Tue, 30 Jun 2020 00:08:53: 68000000 INFO @ Tue, 30 Jun 2020 00:08:57: 54000000 INFO @ Tue, 30 Jun 2020 00:08:58: 63000000 INFO @ Tue, 30 Jun 2020 00:08:58: 69000000 INFO @ Tue, 30 Jun 2020 00:09:03: 64000000 INFO @ Tue, 30 Jun 2020 00:09:03: 55000000 INFO @ Tue, 30 Jun 2020 00:09:04: 70000000 INFO @ Tue, 30 Jun 2020 00:09:09: 65000000 INFO @ Tue, 30 Jun 2020 00:09:09: 71000000 INFO @ Tue, 30 Jun 2020 00:09:10: 56000000 INFO @ Tue, 30 Jun 2020 00:09:14: 66000000 INFO @ Tue, 30 Jun 2020 00:09:15: 72000000 INFO @ Tue, 30 Jun 2020 00:09:16: 57000000 INFO @ Tue, 30 Jun 2020 00:09:19: 67000000 INFO @ Tue, 30 Jun 2020 00:09:20: 73000000 INFO @ Tue, 30 Jun 2020 00:09:22: 58000000 INFO @ Tue, 30 Jun 2020 00:09:25: #1 tag size is determined as 40 bps INFO @ Tue, 30 Jun 2020 00:09:25: #1 tag size = 40 INFO @ Tue, 30 Jun 2020 00:09:25: #1 total tags in treatment: 35461248 INFO @ Tue, 30 Jun 2020 00:09:25: #1 user defined the maximum tags... INFO @ Tue, 30 Jun 2020 00:09:25: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 30 Jun 2020 00:09:25: 68000000 INFO @ Tue, 30 Jun 2020 00:09:25: #1 tags after filtering in treatment: 30688363 INFO @ Tue, 30 Jun 2020 00:09:25: #1 Redundant rate of treatment: 0.13 INFO @ Tue, 30 Jun 2020 00:09:25: #1 finished! INFO @ Tue, 30 Jun 2020 00:09:25: #2 Build Peak Model... INFO @ Tue, 30 Jun 2020 00:09:25: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 30 Jun 2020 00:09:27: #2 number of paired peaks: 51 WARNING @ Tue, 30 Jun 2020 00:09:27: Too few paired peaks (51) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 30 Jun 2020 00:09:27: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/dm3/SRX127432/SRX127432.05_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX127432/SRX127432.05_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX127432/SRX127432.05_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX127432/SRX127432.05_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Tue, 30 Jun 2020 00:09:28: 59000000 INFO @ Tue, 30 Jun 2020 00:09:30: 69000000 INFO @ Tue, 30 Jun 2020 00:09:34: 60000000 INFO @ Tue, 30 Jun 2020 00:09:36: 70000000 INFO @ Tue, 30 Jun 2020 00:09:41: 61000000 INFO @ Tue, 30 Jun 2020 00:09:41: 71000000 INFO @ Tue, 30 Jun 2020 00:09:47: 72000000 INFO @ Tue, 30 Jun 2020 00:09:47: 62000000 INFO @ Tue, 30 Jun 2020 00:09:52: 73000000 INFO @ Tue, 30 Jun 2020 00:09:53: 63000000 BigWig に変換しました。 INFO @ Tue, 30 Jun 2020 00:09:56: #1 tag size is determined as 40 bps INFO @ Tue, 30 Jun 2020 00:09:56: #1 tag size = 40 INFO @ Tue, 30 Jun 2020 00:09:56: #1 total tags in treatment: 35461248 INFO @ Tue, 30 Jun 2020 00:09:56: #1 user defined the maximum tags... INFO @ Tue, 30 Jun 2020 00:09:56: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 30 Jun 2020 00:09:57: #1 tags after filtering in treatment: 30688363 INFO @ Tue, 30 Jun 2020 00:09:57: #1 Redundant rate of treatment: 0.13 INFO @ Tue, 30 Jun 2020 00:09:57: #1 finished! INFO @ Tue, 30 Jun 2020 00:09:57: #2 Build Peak Model... INFO @ Tue, 30 Jun 2020 00:09:57: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 30 Jun 2020 00:09:59: #2 number of paired peaks: 51 WARNING @ Tue, 30 Jun 2020 00:09:59: Too few paired peaks (51) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 30 Jun 2020 00:09:59: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/dm3/SRX127432/SRX127432.10_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX127432/SRX127432.10_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX127432/SRX127432.10_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX127432/SRX127432.10_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Tue, 30 Jun 2020 00:09:59: 64000000 INFO @ Tue, 30 Jun 2020 00:10:05: 65000000 INFO @ Tue, 30 Jun 2020 00:10:11: 66000000 INFO @ Tue, 30 Jun 2020 00:10:17: 67000000 INFO @ Tue, 30 Jun 2020 00:10:22: 68000000 INFO @ Tue, 30 Jun 2020 00:10:28: 69000000 INFO @ Tue, 30 Jun 2020 00:10:34: 70000000 INFO @ Tue, 30 Jun 2020 00:10:40: 71000000 INFO @ Tue, 30 Jun 2020 00:10:46: 72000000 INFO @ Tue, 30 Jun 2020 00:10:51: 73000000 INFO @ Tue, 30 Jun 2020 00:10:56: #1 tag size is determined as 40 bps INFO @ Tue, 30 Jun 2020 00:10:56: #1 tag size = 40 INFO @ Tue, 30 Jun 2020 00:10:56: #1 total tags in treatment: 35461248 INFO @ Tue, 30 Jun 2020 00:10:56: #1 user defined the maximum tags... INFO @ Tue, 30 Jun 2020 00:10:56: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 30 Jun 2020 00:10:57: #1 tags after filtering in treatment: 30688363 INFO @ Tue, 30 Jun 2020 00:10:57: #1 Redundant rate of treatment: 0.13 INFO @ Tue, 30 Jun 2020 00:10:57: #1 finished! INFO @ Tue, 30 Jun 2020 00:10:57: #2 Build Peak Model... INFO @ Tue, 30 Jun 2020 00:10:57: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 30 Jun 2020 00:10:59: #2 number of paired peaks: 51 WARNING @ Tue, 30 Jun 2020 00:10:59: Too few paired peaks (51) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 30 Jun 2020 00:10:59: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/dm3/SRX127432/SRX127432.20_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 0 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX127432/SRX127432.20_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX127432/SRX127432.20_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX127432/SRX127432.20_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling