Job ID = 16436265 SRX = SRX12178895 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2022-08-02T02:16:00 prefetch.2.10.7: 1) Downloading 'SRR15888019'... 2022-08-02T02:16:00 prefetch.2.10.7: Downloading via HTTPS... 2022-08-02T02:18:42 prefetch.2.10.7: HTTPS download succeed 2022-08-02T02:18:42 prefetch.2.10.7: 1) 'SRR15888019' was downloaded successfully 2022-08-02T02:18:42 prefetch.2.10.7: 'SRR15888019' has 0 unresolved dependencies Read 50424873 spots for SRR15888019/SRR15888019.sra Written 50424873 spots for SRR15888019/SRR15888019.sra fastq に変換しました。 bowtie でマッピング中... Your job 16437587 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:17:15 50424873 reads; of these: 50424873 (100.00%) were paired; of these: 14923212 (29.59%) aligned concordantly 0 times 28172373 (55.87%) aligned concordantly exactly 1 time 7329288 (14.54%) aligned concordantly >1 times ---- 14923212 pairs aligned concordantly 0 times; of these: 6062091 (40.62%) aligned discordantly 1 time ---- 8861121 pairs aligned 0 times concordantly or discordantly; of these: 17722242 mates make up the pairs; of these: 10110496 (57.05%) aligned 0 times 5224316 (29.48%) aligned exactly 1 time 2387430 (13.47%) aligned >1 times 89.97% overall alignment rate Time searching: 01:17:15 Overall time: 01:17:15 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 40 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 6822398 / 41438681 = 0.1646 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.7/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 02 Aug 2022 13:11:11: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX12178895/SRX12178895.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX12178895/SRX12178895.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX12178895/SRX12178895.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX12178895/SRX12178895.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 02 Aug 2022 13:11:11: #1 read tag files... INFO @ Tue, 02 Aug 2022 13:11:11: #1 read treatment tags... INFO @ Tue, 02 Aug 2022 13:11:19: 1000000 INFO @ Tue, 02 Aug 2022 13:11:28: 2000000 INFO @ Tue, 02 Aug 2022 13:11:37: 3000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.7/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 02 Aug 2022 13:11:40: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX12178895/SRX12178895.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX12178895/SRX12178895.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX12178895/SRX12178895.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX12178895/SRX12178895.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 02 Aug 2022 13:11:40: #1 read tag files... INFO @ Tue, 02 Aug 2022 13:11:40: #1 read treatment tags... INFO @ Tue, 02 Aug 2022 13:11:45: 4000000 INFO @ Tue, 02 Aug 2022 13:11:48: 1000000 INFO @ Tue, 02 Aug 2022 13:11:54: 5000000 INFO @ Tue, 02 Aug 2022 13:11:57: 2000000 INFO @ Tue, 02 Aug 2022 13:12:03: 6000000 INFO @ Tue, 02 Aug 2022 13:12:05: 3000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.7/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 02 Aug 2022 13:12:10: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX12178895/SRX12178895.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX12178895/SRX12178895.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX12178895/SRX12178895.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX12178895/SRX12178895.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 02 Aug 2022 13:12:10: #1 read tag files... INFO @ Tue, 02 Aug 2022 13:12:10: #1 read treatment tags... INFO @ Tue, 02 Aug 2022 13:12:11: 7000000 INFO @ Tue, 02 Aug 2022 13:12:13: 4000000 INFO @ Tue, 02 Aug 2022 13:12:17: 1000000 INFO @ Tue, 02 Aug 2022 13:12:20: 8000000 INFO @ Tue, 02 Aug 2022 13:12:21: 5000000 INFO @ Tue, 02 Aug 2022 13:12:24: 2000000 INFO @ Tue, 02 Aug 2022 13:12:29: 9000000 INFO @ Tue, 02 Aug 2022 13:12:29: 6000000 INFO @ Tue, 02 Aug 2022 13:12:31: 3000000 INFO @ Tue, 02 Aug 2022 13:12:37: 7000000 INFO @ Tue, 02 Aug 2022 13:12:38: 10000000 INFO @ Tue, 02 Aug 2022 13:12:38: 4000000 INFO @ Tue, 02 Aug 2022 13:12:45: 5000000 INFO @ Tue, 02 Aug 2022 13:12:46: 11000000 INFO @ Tue, 02 Aug 2022 13:12:46: 8000000 INFO @ Tue, 02 Aug 2022 13:12:52: 6000000 INFO @ Tue, 02 Aug 2022 13:12:54: 9000000 INFO @ Tue, 02 Aug 2022 13:12:55: 12000000 INFO @ Tue, 02 Aug 2022 13:12:59: 7000000 INFO @ Tue, 02 Aug 2022 13:13:02: 10000000 INFO @ Tue, 02 Aug 2022 13:13:04: 13000000 INFO @ Tue, 02 Aug 2022 13:13:05: 8000000 INFO @ Tue, 02 Aug 2022 13:13:11: 11000000 INFO @ Tue, 02 Aug 2022 13:13:12: 9000000 INFO @ Tue, 02 Aug 2022 13:13:13: 14000000 INFO @ Tue, 02 Aug 2022 13:13:19: 12000000 INFO @ Tue, 02 Aug 2022 13:13:19: 10000000 INFO @ Tue, 02 Aug 2022 13:13:22: 15000000 INFO @ Tue, 02 Aug 2022 13:13:26: 11000000 INFO @ Tue, 02 Aug 2022 13:13:27: 13000000 INFO @ Tue, 02 Aug 2022 13:13:30: 16000000 INFO @ Tue, 02 Aug 2022 13:13:33: 12000000 INFO @ Tue, 02 Aug 2022 13:13:35: 14000000 INFO @ Tue, 02 Aug 2022 13:13:39: 17000000 INFO @ Tue, 02 Aug 2022 13:13:39: 13000000 INFO @ Tue, 02 Aug 2022 13:13:43: 15000000 INFO @ Tue, 02 Aug 2022 13:13:47: 14000000 INFO @ Tue, 02 Aug 2022 13:13:48: 18000000 INFO @ Tue, 02 Aug 2022 13:13:50: 16000000 INFO @ Tue, 02 Aug 2022 13:13:54: 15000000 INFO @ Tue, 02 Aug 2022 13:13:58: 19000000 INFO @ Tue, 02 Aug 2022 13:13:59: 17000000 INFO @ Tue, 02 Aug 2022 13:14:03: 16000000 INFO @ Tue, 02 Aug 2022 13:14:06: 20000000 INFO @ Tue, 02 Aug 2022 13:14:07: 18000000 INFO @ Tue, 02 Aug 2022 13:14:11: 17000000 INFO @ Tue, 02 Aug 2022 13:14:16: 21000000 INFO @ Tue, 02 Aug 2022 13:14:16: 19000000 INFO @ Tue, 02 Aug 2022 13:14:19: 18000000 INFO @ Tue, 02 Aug 2022 13:14:24: 20000000 INFO @ Tue, 02 Aug 2022 13:14:25: 22000000 INFO @ Tue, 02 Aug 2022 13:14:27: 19000000 INFO @ Tue, 02 Aug 2022 13:14:32: 21000000 INFO @ Tue, 02 Aug 2022 13:14:33: 23000000 INFO @ Tue, 02 Aug 2022 13:14:35: 20000000 INFO @ Tue, 02 Aug 2022 13:14:39: 22000000 INFO @ Tue, 02 Aug 2022 13:14:43: 24000000 INFO @ Tue, 02 Aug 2022 13:14:43: 21000000 INFO @ Tue, 02 Aug 2022 13:14:47: 23000000 INFO @ Tue, 02 Aug 2022 13:14:51: 22000000 INFO @ Tue, 02 Aug 2022 13:14:52: 25000000 INFO @ Tue, 02 Aug 2022 13:14:54: 24000000 INFO @ Tue, 02 Aug 2022 13:15:00: 23000000 INFO @ Tue, 02 Aug 2022 13:15:01: 26000000 INFO @ Tue, 02 Aug 2022 13:15:02: 25000000 INFO @ Tue, 02 Aug 2022 13:15:08: 24000000 INFO @ Tue, 02 Aug 2022 13:15:09: 26000000 INFO @ Tue, 02 Aug 2022 13:15:10: 27000000 INFO @ Tue, 02 Aug 2022 13:15:16: 25000000 INFO @ Tue, 02 Aug 2022 13:15:16: 27000000 INFO @ Tue, 02 Aug 2022 13:15:19: 28000000 INFO @ Tue, 02 Aug 2022 13:15:23: 28000000 INFO @ Tue, 02 Aug 2022 13:15:24: 26000000 INFO @ Tue, 02 Aug 2022 13:15:28: 29000000 INFO @ Tue, 02 Aug 2022 13:15:31: 29000000 INFO @ Tue, 02 Aug 2022 13:15:31: 27000000 INFO @ Tue, 02 Aug 2022 13:15:37: 30000000 INFO @ Tue, 02 Aug 2022 13:15:38: 30000000 INFO @ Tue, 02 Aug 2022 13:15:39: 28000000 INFO @ Tue, 02 Aug 2022 13:15:46: 31000000 INFO @ Tue, 02 Aug 2022 13:15:46: 31000000 INFO @ Tue, 02 Aug 2022 13:15:47: 29000000 INFO @ Tue, 02 Aug 2022 13:15:53: 32000000 INFO @ Tue, 02 Aug 2022 13:15:55: 32000000 INFO @ Tue, 02 Aug 2022 13:15:55: 30000000 INFO @ Tue, 02 Aug 2022 13:16:01: 33000000 INFO @ Tue, 02 Aug 2022 13:16:03: 31000000 INFO @ Tue, 02 Aug 2022 13:16:04: 33000000 INFO @ Tue, 02 Aug 2022 13:16:09: 34000000 INFO @ Tue, 02 Aug 2022 13:16:11: 32000000 INFO @ Tue, 02 Aug 2022 13:16:13: 34000000 INFO @ Tue, 02 Aug 2022 13:16:16: 35000000 INFO @ Tue, 02 Aug 2022 13:16:19: 33000000 INFO @ Tue, 02 Aug 2022 13:16:22: 35000000 INFO @ Tue, 02 Aug 2022 13:16:24: 36000000 INFO @ Tue, 02 Aug 2022 13:16:27: 34000000 INFO @ Tue, 02 Aug 2022 13:16:31: 37000000 INFO @ Tue, 02 Aug 2022 13:16:31: 36000000 INFO @ Tue, 02 Aug 2022 13:16:35: 35000000 INFO @ Tue, 02 Aug 2022 13:16:39: 38000000 INFO @ Tue, 02 Aug 2022 13:16:41: 37000000 INFO @ Tue, 02 Aug 2022 13:16:43: 36000000 INFO @ Tue, 02 Aug 2022 13:16:46: 39000000 INFO @ Tue, 02 Aug 2022 13:16:50: 38000000 INFO @ Tue, 02 Aug 2022 13:16:51: 37000000 INFO @ Tue, 02 Aug 2022 13:16:54: 40000000 INFO @ Tue, 02 Aug 2022 13:16:59: 39000000 INFO @ Tue, 02 Aug 2022 13:16:59: 38000000 INFO @ Tue, 02 Aug 2022 13:17:01: 41000000 INFO @ Tue, 02 Aug 2022 13:17:07: 39000000 INFO @ Tue, 02 Aug 2022 13:17:08: 40000000 INFO @ Tue, 02 Aug 2022 13:17:09: 42000000 INFO @ Tue, 02 Aug 2022 13:17:15: 40000000 INFO @ Tue, 02 Aug 2022 13:17:16: 43000000 INFO @ Tue, 02 Aug 2022 13:17:17: 41000000 INFO @ Tue, 02 Aug 2022 13:17:23: 41000000 INFO @ Tue, 02 Aug 2022 13:17:24: 44000000 INFO @ Tue, 02 Aug 2022 13:17:26: 42000000 INFO @ Tue, 02 Aug 2022 13:17:31: 42000000 INFO @ Tue, 02 Aug 2022 13:17:31: 45000000 INFO @ Tue, 02 Aug 2022 13:17:35: 43000000 INFO @ Tue, 02 Aug 2022 13:17:39: 46000000 INFO @ Tue, 02 Aug 2022 13:17:39: 43000000 INFO @ Tue, 02 Aug 2022 13:17:44: 44000000 INFO @ Tue, 02 Aug 2022 13:17:46: 47000000 INFO @ Tue, 02 Aug 2022 13:17:47: 44000000 INFO @ Tue, 02 Aug 2022 13:17:53: 45000000 INFO @ Tue, 02 Aug 2022 13:17:53: 48000000 INFO @ Tue, 02 Aug 2022 13:17:54: 45000000 INFO @ Tue, 02 Aug 2022 13:18:01: 49000000 INFO @ Tue, 02 Aug 2022 13:18:02: 46000000 INFO @ Tue, 02 Aug 2022 13:18:02: 46000000 INFO @ Tue, 02 Aug 2022 13:18:09: 50000000 INFO @ Tue, 02 Aug 2022 13:18:10: 47000000 INFO @ Tue, 02 Aug 2022 13:18:11: 47000000 INFO @ Tue, 02 Aug 2022 13:18:16: 51000000 INFO @ Tue, 02 Aug 2022 13:18:18: 48000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 02 Aug 2022 13:18:20: 48000000 INFO @ Tue, 02 Aug 2022 13:18:24: 52000000 INFO @ Tue, 02 Aug 2022 13:18:26: 49000000 INFO @ Tue, 02 Aug 2022 13:18:29: 49000000 INFO @ Tue, 02 Aug 2022 13:18:31: 53000000 INFO @ Tue, 02 Aug 2022 13:18:34: 50000000 INFO @ Tue, 02 Aug 2022 13:18:38: 50000000 INFO @ Tue, 02 Aug 2022 13:18:39: 54000000 INFO @ Tue, 02 Aug 2022 13:18:41: 51000000 INFO @ Tue, 02 Aug 2022 13:18:46: 55000000 INFO @ Tue, 02 Aug 2022 13:18:46: 51000000 INFO @ Tue, 02 Aug 2022 13:18:49: 52000000 INFO @ Tue, 02 Aug 2022 13:18:53: 56000000 INFO @ Tue, 02 Aug 2022 13:18:55: 52000000 INFO @ Tue, 02 Aug 2022 13:18:57: 53000000 INFO @ Tue, 02 Aug 2022 13:19:01: 57000000 INFO @ Tue, 02 Aug 2022 13:19:04: 53000000 INFO @ Tue, 02 Aug 2022 13:19:05: 54000000 INFO @ Tue, 02 Aug 2022 13:19:08: 58000000 INFO @ Tue, 02 Aug 2022 13:19:13: 55000000 INFO @ Tue, 02 Aug 2022 13:19:13: 54000000 INFO @ Tue, 02 Aug 2022 13:19:16: 59000000 INFO @ Tue, 02 Aug 2022 13:19:20: 56000000 INFO @ Tue, 02 Aug 2022 13:19:22: 55000000 INFO @ Tue, 02 Aug 2022 13:19:23: 60000000 INFO @ Tue, 02 Aug 2022 13:19:28: 57000000 INFO @ Tue, 02 Aug 2022 13:19:31: 56000000 INFO @ Tue, 02 Aug 2022 13:19:31: 61000000 INFO @ Tue, 02 Aug 2022 13:19:37: 58000000 INFO @ Tue, 02 Aug 2022 13:19:38: 62000000 INFO @ Tue, 02 Aug 2022 13:19:40: 57000000 INFO @ Tue, 02 Aug 2022 13:19:45: 59000000 INFO @ Tue, 02 Aug 2022 13:19:46: 63000000 INFO @ Tue, 02 Aug 2022 13:19:48: 58000000 INFO @ Tue, 02 Aug 2022 13:19:53: 60000000 INFO @ Tue, 02 Aug 2022 13:19:54: 64000000 INFO @ Tue, 02 Aug 2022 13:19:57: 59000000 INFO @ Tue, 02 Aug 2022 13:20:01: 65000000 INFO @ Tue, 02 Aug 2022 13:20:02: 61000000 INFO @ Tue, 02 Aug 2022 13:20:06: 60000000 INFO @ Tue, 02 Aug 2022 13:20:08: 66000000 INFO @ Tue, 02 Aug 2022 13:20:10: 62000000 INFO @ Tue, 02 Aug 2022 13:20:15: 61000000 INFO @ Tue, 02 Aug 2022 13:20:15: 67000000 INFO @ Tue, 02 Aug 2022 13:20:18: 63000000 BigWig に変換しました。 INFO @ Tue, 02 Aug 2022 13:20:22: 68000000 INFO @ Tue, 02 Aug 2022 13:20:24: 62000000 INFO @ Tue, 02 Aug 2022 13:20:26: 64000000 INFO @ Tue, 02 Aug 2022 13:20:29: 69000000 INFO @ Tue, 02 Aug 2022 13:20:33: 63000000 INFO @ Tue, 02 Aug 2022 13:20:34: 65000000 INFO @ Tue, 02 Aug 2022 13:20:36: 70000000 INFO @ Tue, 02 Aug 2022 13:20:42: 64000000 INFO @ Tue, 02 Aug 2022 13:20:42: 66000000 INFO @ Tue, 02 Aug 2022 13:20:43: 71000000 INFO @ Tue, 02 Aug 2022 13:20:50: 67000000 INFO @ Tue, 02 Aug 2022 13:20:50: 65000000 INFO @ Tue, 02 Aug 2022 13:20:51: 72000000 INFO @ Tue, 02 Aug 2022 13:20:57: 68000000 INFO @ Tue, 02 Aug 2022 13:20:58: 73000000 INFO @ Tue, 02 Aug 2022 13:20:59: 66000000 INFO @ Tue, 02 Aug 2022 13:21:05: 74000000 INFO @ Tue, 02 Aug 2022 13:21:05: 69000000 INFO @ Tue, 02 Aug 2022 13:21:08: 67000000 INFO @ Tue, 02 Aug 2022 13:21:11: 75000000 INFO @ Tue, 02 Aug 2022 13:21:13: 70000000 INFO @ Tue, 02 Aug 2022 13:21:17: 68000000 INFO @ Tue, 02 Aug 2022 13:21:18: 76000000 INFO @ Tue, 02 Aug 2022 13:21:21: 71000000 INFO @ Tue, 02 Aug 2022 13:21:25: 77000000 INFO @ Tue, 02 Aug 2022 13:21:25: 69000000 INFO @ Tue, 02 Aug 2022 13:21:26: #1 tag size is determined as 50 bps INFO @ Tue, 02 Aug 2022 13:21:26: #1 tag size = 50 INFO @ Tue, 02 Aug 2022 13:21:26: #1 total tags in treatment: 29228055 INFO @ Tue, 02 Aug 2022 13:21:26: #1 user defined the maximum tags... INFO @ Tue, 02 Aug 2022 13:21:26: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 02 Aug 2022 13:21:27: #1 tags after filtering in treatment: 20756918 INFO @ Tue, 02 Aug 2022 13:21:27: #1 Redundant rate of treatment: 0.29 INFO @ Tue, 02 Aug 2022 13:21:27: #1 finished! INFO @ Tue, 02 Aug 2022 13:21:27: #2 Build Peak Model... INFO @ Tue, 02 Aug 2022 13:21:27: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 02 Aug 2022 13:21:28: #2 number of paired peaks: 93 WARNING @ Tue, 02 Aug 2022 13:21:28: Too few paired peaks (93) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 02 Aug 2022 13:21:28: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/dm3/SRX12178895/SRX12178895.10_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX12178895/SRX12178895.10_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX12178895/SRX12178895.10_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX12178895/SRX12178895.10_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Tue, 02 Aug 2022 13:21:29: 72000000 INFO @ Tue, 02 Aug 2022 13:21:34: 70000000 INFO @ Tue, 02 Aug 2022 13:21:36: 73000000 INFO @ Tue, 02 Aug 2022 13:21:43: 71000000 INFO @ Tue, 02 Aug 2022 13:21:44: 74000000 INFO @ Tue, 02 Aug 2022 13:21:51: 75000000 INFO @ Tue, 02 Aug 2022 13:21:52: 72000000 INFO @ Tue, 02 Aug 2022 13:21:59: 76000000 INFO @ Tue, 02 Aug 2022 13:22:00: 73000000 INFO @ Tue, 02 Aug 2022 13:22:07: 77000000 INFO @ Tue, 02 Aug 2022 13:22:07: #1 tag size is determined as 50 bps INFO @ Tue, 02 Aug 2022 13:22:07: #1 tag size = 50 INFO @ Tue, 02 Aug 2022 13:22:07: #1 total tags in treatment: 29228055 INFO @ Tue, 02 Aug 2022 13:22:07: #1 user defined the maximum tags... INFO @ Tue, 02 Aug 2022 13:22:07: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 02 Aug 2022 13:22:08: #1 tags after filtering in treatment: 20756918 INFO @ Tue, 02 Aug 2022 13:22:08: #1 Redundant rate of treatment: 0.29 INFO @ Tue, 02 Aug 2022 13:22:08: #1 finished! INFO @ Tue, 02 Aug 2022 13:22:08: #2 Build Peak Model... INFO @ Tue, 02 Aug 2022 13:22:08: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 02 Aug 2022 13:22:09: 74000000 INFO @ Tue, 02 Aug 2022 13:22:09: #2 number of paired peaks: 93 WARNING @ Tue, 02 Aug 2022 13:22:09: Too few paired peaks (93) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 02 Aug 2022 13:22:09: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/dm3/SRX12178895/SRX12178895.20_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX12178895/SRX12178895.20_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX12178895/SRX12178895.20_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX12178895/SRX12178895.20_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Tue, 02 Aug 2022 13:22:17: 75000000 INFO @ Tue, 02 Aug 2022 13:22:26: 76000000 INFO @ Tue, 02 Aug 2022 13:22:34: 77000000 INFO @ Tue, 02 Aug 2022 13:22:35: #1 tag size is determined as 50 bps INFO @ Tue, 02 Aug 2022 13:22:35: #1 tag size = 50 INFO @ Tue, 02 Aug 2022 13:22:35: #1 total tags in treatment: 29228055 INFO @ Tue, 02 Aug 2022 13:22:35: #1 user defined the maximum tags... INFO @ Tue, 02 Aug 2022 13:22:35: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 02 Aug 2022 13:22:36: #1 tags after filtering in treatment: 20756918 INFO @ Tue, 02 Aug 2022 13:22:36: #1 Redundant rate of treatment: 0.29 INFO @ Tue, 02 Aug 2022 13:22:36: #1 finished! INFO @ Tue, 02 Aug 2022 13:22:36: #2 Build Peak Model... INFO @ Tue, 02 Aug 2022 13:22:36: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 02 Aug 2022 13:22:37: #2 number of paired peaks: 93 WARNING @ Tue, 02 Aug 2022 13:22:37: Too few paired peaks (93) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 02 Aug 2022 13:22:37: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/dm3/SRX12178895/SRX12178895.05_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX12178895/SRX12178895.05_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX12178895/SRX12178895.05_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX12178895/SRX12178895.05_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling