Job ID = 16440270 SRX = SRX12178844 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2022-08-02T08:42:36 prefetch.2.10.7: 1) Downloading 'SRR15888070'... 2022-08-02T08:42:36 prefetch.2.10.7: Downloading via HTTPS... 2022-08-02T08:44:05 prefetch.2.10.7: HTTPS download succeed 2022-08-02T08:44:05 prefetch.2.10.7: 1) 'SRR15888070' was downloaded successfully 2022-08-02T08:44:05 prefetch.2.10.7: 'SRR15888070' has 0 unresolved dependencies Read 33042374 spots for SRR15888070/SRR15888070.sra Written 33042374 spots for SRR15888070/SRR15888070.sra fastq に変換しました。 bowtie でマッピング中... Your job 16441114 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:48:37 33042374 reads; of these: 33042374 (100.00%) were paired; of these: 9415673 (28.50%) aligned concordantly 0 times 17056997 (51.62%) aligned concordantly exactly 1 time 6569704 (19.88%) aligned concordantly >1 times ---- 9415673 pairs aligned concordantly 0 times; of these: 3306592 (35.12%) aligned discordantly 1 time ---- 6109081 pairs aligned 0 times concordantly or discordantly; of these: 12218162 mates make up the pairs; of these: 7594796 (62.16%) aligned 0 times 2800133 (22.92%) aligned exactly 1 time 1823233 (14.92%) aligned >1 times 88.51% overall alignment rate Time searching: 00:48:37 Overall time: 00:48:37 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 24 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 5567317 / 26820554 = 0.2076 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.7/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 02 Aug 2022 18:54:13: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX12178844/SRX12178844.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX12178844/SRX12178844.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX12178844/SRX12178844.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX12178844/SRX12178844.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 02 Aug 2022 18:54:13: #1 read tag files... INFO @ Tue, 02 Aug 2022 18:54:13: #1 read treatment tags... INFO @ Tue, 02 Aug 2022 18:54:19: 1000000 INFO @ Tue, 02 Aug 2022 18:54:26: 2000000 INFO @ Tue, 02 Aug 2022 18:54:32: 3000000 INFO @ Tue, 02 Aug 2022 18:54:38: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.7/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 02 Aug 2022 18:54:42: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX12178844/SRX12178844.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX12178844/SRX12178844.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX12178844/SRX12178844.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX12178844/SRX12178844.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 02 Aug 2022 18:54:42: #1 read tag files... INFO @ Tue, 02 Aug 2022 18:54:42: #1 read treatment tags... INFO @ Tue, 02 Aug 2022 18:54:45: 5000000 INFO @ Tue, 02 Aug 2022 18:54:50: 1000000 INFO @ Tue, 02 Aug 2022 18:54:51: 6000000 INFO @ Tue, 02 Aug 2022 18:54:57: 2000000 INFO @ Tue, 02 Aug 2022 18:54:58: 7000000 INFO @ Tue, 02 Aug 2022 18:55:04: 3000000 INFO @ Tue, 02 Aug 2022 18:55:04: 8000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.7/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 02 Aug 2022 18:55:11: 9000000 INFO @ Tue, 02 Aug 2022 18:55:11: 4000000 INFO @ Tue, 02 Aug 2022 18:55:12: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX12178844/SRX12178844.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX12178844/SRX12178844.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX12178844/SRX12178844.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX12178844/SRX12178844.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 02 Aug 2022 18:55:12: #1 read tag files... INFO @ Tue, 02 Aug 2022 18:55:12: #1 read treatment tags... INFO @ Tue, 02 Aug 2022 18:55:18: 10000000 INFO @ Tue, 02 Aug 2022 18:55:18: 5000000 INFO @ Tue, 02 Aug 2022 18:55:19: 1000000 INFO @ Tue, 02 Aug 2022 18:55:25: 11000000 INFO @ Tue, 02 Aug 2022 18:55:25: 6000000 INFO @ Tue, 02 Aug 2022 18:55:25: 2000000 INFO @ Tue, 02 Aug 2022 18:55:31: 12000000 INFO @ Tue, 02 Aug 2022 18:55:32: 7000000 INFO @ Tue, 02 Aug 2022 18:55:33: 3000000 INFO @ Tue, 02 Aug 2022 18:55:38: 13000000 INFO @ Tue, 02 Aug 2022 18:55:39: 8000000 INFO @ Tue, 02 Aug 2022 18:55:39: 4000000 INFO @ Tue, 02 Aug 2022 18:55:45: 14000000 INFO @ Tue, 02 Aug 2022 18:55:46: 9000000 INFO @ Tue, 02 Aug 2022 18:55:47: 5000000 INFO @ Tue, 02 Aug 2022 18:55:52: 15000000 INFO @ Tue, 02 Aug 2022 18:55:53: 10000000 INFO @ Tue, 02 Aug 2022 18:55:54: 6000000 INFO @ Tue, 02 Aug 2022 18:55:59: 16000000 INFO @ Tue, 02 Aug 2022 18:56:00: 11000000 INFO @ Tue, 02 Aug 2022 18:56:00: 7000000 INFO @ Tue, 02 Aug 2022 18:56:06: 17000000 INFO @ Tue, 02 Aug 2022 18:56:07: 12000000 INFO @ Tue, 02 Aug 2022 18:56:07: 8000000 INFO @ Tue, 02 Aug 2022 18:56:13: 18000000 INFO @ Tue, 02 Aug 2022 18:56:14: 13000000 INFO @ Tue, 02 Aug 2022 18:56:14: 9000000 INFO @ Tue, 02 Aug 2022 18:56:20: 19000000 INFO @ Tue, 02 Aug 2022 18:56:21: 14000000 INFO @ Tue, 02 Aug 2022 18:56:21: 10000000 INFO @ Tue, 02 Aug 2022 18:56:27: 20000000 INFO @ Tue, 02 Aug 2022 18:56:28: 11000000 INFO @ Tue, 02 Aug 2022 18:56:28: 15000000 INFO @ Tue, 02 Aug 2022 18:56:34: 21000000 INFO @ Tue, 02 Aug 2022 18:56:34: 12000000 INFO @ Tue, 02 Aug 2022 18:56:35: 16000000 INFO @ Tue, 02 Aug 2022 18:56:41: 22000000 INFO @ Tue, 02 Aug 2022 18:56:42: 13000000 INFO @ Tue, 02 Aug 2022 18:56:42: 17000000 INFO @ Tue, 02 Aug 2022 18:56:47: 23000000 INFO @ Tue, 02 Aug 2022 18:56:49: 18000000 INFO @ Tue, 02 Aug 2022 18:56:50: 14000000 INFO @ Tue, 02 Aug 2022 18:56:54: 24000000 INFO @ Tue, 02 Aug 2022 18:56:56: 19000000 INFO @ Tue, 02 Aug 2022 18:56:58: 15000000 INFO @ Tue, 02 Aug 2022 18:57:01: 25000000 INFO @ Tue, 02 Aug 2022 18:57:04: 20000000 INFO @ Tue, 02 Aug 2022 18:57:04: 16000000 INFO @ Tue, 02 Aug 2022 18:57:08: 26000000 INFO @ Tue, 02 Aug 2022 18:57:11: 21000000 INFO @ Tue, 02 Aug 2022 18:57:11: 17000000 INFO @ Tue, 02 Aug 2022 18:57:14: 27000000 INFO @ Tue, 02 Aug 2022 18:57:17: 22000000 INFO @ Tue, 02 Aug 2022 18:57:19: 18000000 INFO @ Tue, 02 Aug 2022 18:57:21: 28000000 INFO @ Tue, 02 Aug 2022 18:57:24: 23000000 INFO @ Tue, 02 Aug 2022 18:57:26: 19000000 INFO @ Tue, 02 Aug 2022 18:57:28: 29000000 INFO @ Tue, 02 Aug 2022 18:57:31: 24000000 INFO @ Tue, 02 Aug 2022 18:57:32: 20000000 INFO @ Tue, 02 Aug 2022 18:57:34: 30000000 INFO @ Tue, 02 Aug 2022 18:57:38: 25000000 INFO @ Tue, 02 Aug 2022 18:57:39: 21000000 INFO @ Tue, 02 Aug 2022 18:57:41: 31000000 INFO @ Tue, 02 Aug 2022 18:57:45: 26000000 INFO @ Tue, 02 Aug 2022 18:57:46: 22000000 INFO @ Tue, 02 Aug 2022 18:57:48: 32000000 INFO @ Tue, 02 Aug 2022 18:57:52: 27000000 INFO @ Tue, 02 Aug 2022 18:57:52: 23000000 INFO @ Tue, 02 Aug 2022 18:57:55: 33000000 INFO @ Tue, 02 Aug 2022 18:57:59: 28000000 INFO @ Tue, 02 Aug 2022 18:57:59: 24000000 INFO @ Tue, 02 Aug 2022 18:58:02: 34000000 INFO @ Tue, 02 Aug 2022 18:58:06: 29000000 INFO @ Tue, 02 Aug 2022 18:58:06: 25000000 INFO @ Tue, 02 Aug 2022 18:58:09: 35000000 INFO @ Tue, 02 Aug 2022 18:58:12: 26000000 INFO @ Tue, 02 Aug 2022 18:58:12: 30000000 INFO @ Tue, 02 Aug 2022 18:58:15: 36000000 INFO @ Tue, 02 Aug 2022 18:58:19: 27000000 INFO @ Tue, 02 Aug 2022 18:58:19: 31000000 INFO @ Tue, 02 Aug 2022 18:58:22: 37000000 INFO @ Tue, 02 Aug 2022 18:58:26: 28000000 INFO @ Tue, 02 Aug 2022 18:58:26: 32000000 INFO @ Tue, 02 Aug 2022 18:58:29: 38000000 INFO @ Tue, 02 Aug 2022 18:58:32: 29000000 INFO @ Tue, 02 Aug 2022 18:58:33: 33000000 INFO @ Tue, 02 Aug 2022 18:58:36: 39000000 INFO @ Tue, 02 Aug 2022 18:58:39: 30000000 INFO @ Tue, 02 Aug 2022 18:58:40: 34000000 INFO @ Tue, 02 Aug 2022 18:58:43: 40000000 INFO @ Tue, 02 Aug 2022 18:58:46: 31000000 INFO @ Tue, 02 Aug 2022 18:58:47: 35000000 INFO @ Tue, 02 Aug 2022 18:58:49: 41000000 INFO @ Tue, 02 Aug 2022 18:58:52: 32000000 INFO @ Tue, 02 Aug 2022 18:58:54: 36000000 INFO @ Tue, 02 Aug 2022 18:58:56: 42000000 INFO @ Tue, 02 Aug 2022 18:58:59: 33000000 INFO @ Tue, 02 Aug 2022 18:59:00: 37000000 INFO @ Tue, 02 Aug 2022 18:59:03: 43000000 INFO @ Tue, 02 Aug 2022 18:59:06: 34000000 INFO @ Tue, 02 Aug 2022 18:59:07: 38000000 INFO @ Tue, 02 Aug 2022 18:59:10: 44000000 INFO @ Tue, 02 Aug 2022 18:59:12: 35000000 INFO @ Tue, 02 Aug 2022 18:59:14: 39000000 INFO @ Tue, 02 Aug 2022 18:59:16: 45000000 INFO @ Tue, 02 Aug 2022 18:59:19: 36000000 INFO @ Tue, 02 Aug 2022 18:59:21: 40000000 INFO @ Tue, 02 Aug 2022 18:59:23: 46000000 INFO @ Tue, 02 Aug 2022 18:59:25: 37000000 INFO @ Tue, 02 Aug 2022 18:59:28: 41000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 02 Aug 2022 18:59:31: 47000000 INFO @ Tue, 02 Aug 2022 18:59:32: 38000000 INFO @ Tue, 02 Aug 2022 18:59:34: #1 tag size is determined as 50 bps INFO @ Tue, 02 Aug 2022 18:59:34: #1 tag size = 50 INFO @ Tue, 02 Aug 2022 18:59:34: #1 total tags in treatment: 18363948 INFO @ Tue, 02 Aug 2022 18:59:34: #1 user defined the maximum tags... INFO @ Tue, 02 Aug 2022 18:59:34: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 02 Aug 2022 18:59:34: #1 tags after filtering in treatment: 13562713 INFO @ Tue, 02 Aug 2022 18:59:34: #1 Redundant rate of treatment: 0.26 INFO @ Tue, 02 Aug 2022 18:59:34: #1 finished! INFO @ Tue, 02 Aug 2022 18:59:34: #2 Build Peak Model... INFO @ Tue, 02 Aug 2022 18:59:34: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 02 Aug 2022 18:59:35: 42000000 INFO @ Tue, 02 Aug 2022 18:59:35: #2 number of paired peaks: 372 WARNING @ Tue, 02 Aug 2022 18:59:35: Fewer paired peaks (372) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 372 pairs to build model! INFO @ Tue, 02 Aug 2022 18:59:35: start model_add_line... INFO @ Tue, 02 Aug 2022 18:59:35: start X-correlation... INFO @ Tue, 02 Aug 2022 18:59:36: end of X-cor INFO @ Tue, 02 Aug 2022 18:59:36: #2 finished! INFO @ Tue, 02 Aug 2022 18:59:36: #2 predicted fragment length is 107 bps INFO @ Tue, 02 Aug 2022 18:59:36: #2 alternative fragment length(s) may be 107 bps INFO @ Tue, 02 Aug 2022 18:59:36: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX12178844/SRX12178844.05_model.r INFO @ Tue, 02 Aug 2022 18:59:36: #3 Call peaks... INFO @ Tue, 02 Aug 2022 18:59:36: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 02 Aug 2022 18:59:38: 39000000 INFO @ Tue, 02 Aug 2022 18:59:42: 43000000 INFO @ Tue, 02 Aug 2022 18:59:45: 40000000 INFO @ Tue, 02 Aug 2022 18:59:49: 44000000 INFO @ Tue, 02 Aug 2022 18:59:51: 41000000 INFO @ Tue, 02 Aug 2022 18:59:55: 45000000 INFO @ Tue, 02 Aug 2022 18:59:58: 42000000 INFO @ Tue, 02 Aug 2022 19:00:02: #3 Call peaks for each chromosome... INFO @ Tue, 02 Aug 2022 19:00:02: 46000000 INFO @ Tue, 02 Aug 2022 19:00:04: 43000000 INFO @ Tue, 02 Aug 2022 19:00:09: 47000000 INFO @ Tue, 02 Aug 2022 19:00:10: 44000000 INFO @ Tue, 02 Aug 2022 19:00:12: #1 tag size is determined as 50 bps INFO @ Tue, 02 Aug 2022 19:00:12: #1 tag size = 50 INFO @ Tue, 02 Aug 2022 19:00:12: #1 total tags in treatment: 18363948 INFO @ Tue, 02 Aug 2022 19:00:12: #1 user defined the maximum tags... INFO @ Tue, 02 Aug 2022 19:00:12: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 02 Aug 2022 19:00:12: #1 tags after filtering in treatment: 13562713 INFO @ Tue, 02 Aug 2022 19:00:12: #1 Redundant rate of treatment: 0.26 INFO @ Tue, 02 Aug 2022 19:00:12: #1 finished! INFO @ Tue, 02 Aug 2022 19:00:12: #2 Build Peak Model... INFO @ Tue, 02 Aug 2022 19:00:12: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 02 Aug 2022 19:00:13: #2 number of paired peaks: 372 WARNING @ Tue, 02 Aug 2022 19:00:13: Fewer paired peaks (372) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 372 pairs to build model! INFO @ Tue, 02 Aug 2022 19:00:13: start model_add_line... INFO @ Tue, 02 Aug 2022 19:00:13: start X-correlation... INFO @ Tue, 02 Aug 2022 19:00:13: end of X-cor INFO @ Tue, 02 Aug 2022 19:00:13: #2 finished! INFO @ Tue, 02 Aug 2022 19:00:13: #2 predicted fragment length is 107 bps INFO @ Tue, 02 Aug 2022 19:00:13: #2 alternative fragment length(s) may be 107 bps INFO @ Tue, 02 Aug 2022 19:00:13: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX12178844/SRX12178844.10_model.r INFO @ Tue, 02 Aug 2022 19:00:13: #3 Call peaks... INFO @ Tue, 02 Aug 2022 19:00:13: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 02 Aug 2022 19:00:17: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX12178844/SRX12178844.05_peaks.xls INFO @ Tue, 02 Aug 2022 19:00:17: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX12178844/SRX12178844.05_peaks.narrowPeak INFO @ Tue, 02 Aug 2022 19:00:17: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX12178844/SRX12178844.05_summits.bed INFO @ Tue, 02 Aug 2022 19:00:17: Done! INFO @ Tue, 02 Aug 2022 19:00:17: 45000000 pass1 - making usageList (15 chroms): 2 millis pass2 - checking and writing primary data (10564 records, 4 fields): 15 millis CompletedMACS2peakCalling INFO @ Tue, 02 Aug 2022 19:00:23: 46000000 INFO @ Tue, 02 Aug 2022 19:00:30: 47000000 INFO @ Tue, 02 Aug 2022 19:00:32: #1 tag size is determined as 50 bps INFO @ Tue, 02 Aug 2022 19:00:32: #1 tag size = 50 INFO @ Tue, 02 Aug 2022 19:00:32: #1 total tags in treatment: 18363948 INFO @ Tue, 02 Aug 2022 19:00:32: #1 user defined the maximum tags... INFO @ Tue, 02 Aug 2022 19:00:32: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 02 Aug 2022 19:00:33: #1 tags after filtering in treatment: 13562713 INFO @ Tue, 02 Aug 2022 19:00:33: #1 Redundant rate of treatment: 0.26 INFO @ Tue, 02 Aug 2022 19:00:33: #1 finished! INFO @ Tue, 02 Aug 2022 19:00:33: #2 Build Peak Model... INFO @ Tue, 02 Aug 2022 19:00:33: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 02 Aug 2022 19:00:34: #2 number of paired peaks: 372 WARNING @ Tue, 02 Aug 2022 19:00:34: Fewer paired peaks (372) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 372 pairs to build model! INFO @ Tue, 02 Aug 2022 19:00:34: start model_add_line... INFO @ Tue, 02 Aug 2022 19:00:34: start X-correlation... INFO @ Tue, 02 Aug 2022 19:00:34: end of X-cor INFO @ Tue, 02 Aug 2022 19:00:34: #2 finished! INFO @ Tue, 02 Aug 2022 19:00:34: #2 predicted fragment length is 107 bps INFO @ Tue, 02 Aug 2022 19:00:34: #2 alternative fragment length(s) may be 107 bps INFO @ Tue, 02 Aug 2022 19:00:34: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX12178844/SRX12178844.20_model.r INFO @ Tue, 02 Aug 2022 19:00:34: #3 Call peaks... INFO @ Tue, 02 Aug 2022 19:00:34: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 02 Aug 2022 19:00:40: #3 Call peaks for each chromosome... INFO @ Tue, 02 Aug 2022 19:00:54: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX12178844/SRX12178844.10_peaks.xls INFO @ Tue, 02 Aug 2022 19:00:54: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX12178844/SRX12178844.10_peaks.narrowPeak INFO @ Tue, 02 Aug 2022 19:00:54: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX12178844/SRX12178844.10_summits.bed INFO @ Tue, 02 Aug 2022 19:00:54: Done! pass1 - making usageList (15 chroms): 2 millis pass2 - checking and writing primary data (5753 records, 4 fields): 9 millis CompletedMACS2peakCalling BigWig に変換しました。 INFO @ Tue, 02 Aug 2022 19:01:00: #3 Call peaks for each chromosome... INFO @ Tue, 02 Aug 2022 19:01:14: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX12178844/SRX12178844.20_peaks.xls INFO @ Tue, 02 Aug 2022 19:01:14: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX12178844/SRX12178844.20_peaks.narrowPeak INFO @ Tue, 02 Aug 2022 19:01:14: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX12178844/SRX12178844.20_summits.bed INFO @ Tue, 02 Aug 2022 19:01:14: Done! pass1 - making usageList (13 chroms): 0 millis pass2 - checking and writing primary data (1559 records, 4 fields): 5 millis CompletedMACS2peakCalling