Job ID = 16439688 SRX = SRX11499359 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 11174997 spots for SRR15192708/SRR15192708.sra Written 11174997 spots for SRR15192708/SRR15192708.sra Read 16009386 spots for SRR15192709/SRR15192709.sra Written 16009386 spots for SRR15192709/SRR15192709.sra fastq に変換しました。 bowtie でマッピング中... Your job 16440520 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:01 Multiseed full-index search: 01:38:07 27184383 reads; of these: 27184383 (100.00%) were paired; of these: 4189938 (15.41%) aligned concordantly 0 times 17729169 (65.22%) aligned concordantly exactly 1 time 5265276 (19.37%) aligned concordantly >1 times ---- 4189938 pairs aligned concordantly 0 times; of these: 1997211 (47.67%) aligned discordantly 1 time ---- 2192727 pairs aligned 0 times concordantly or discordantly; of these: 4385454 mates make up the pairs; of these: 1978973 (45.13%) aligned 0 times 1086399 (24.77%) aligned exactly 1 time 1320082 (30.10%) aligned >1 times 96.36% overall alignment rate Time searching: 01:38:08 Overall time: 01:38:08 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 40 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 2953783 / 22857442 = 0.1292 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.7/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 02 Aug 2022 18:02:46: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX11499359/SRX11499359.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX11499359/SRX11499359.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX11499359/SRX11499359.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX11499359/SRX11499359.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 02 Aug 2022 18:02:46: #1 read tag files... INFO @ Tue, 02 Aug 2022 18:02:46: #1 read treatment tags... INFO @ Tue, 02 Aug 2022 18:02:55: 1000000 INFO @ Tue, 02 Aug 2022 18:03:03: 2000000 INFO @ Tue, 02 Aug 2022 18:03:11: 3000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.7/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 02 Aug 2022 18:03:15: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX11499359/SRX11499359.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX11499359/SRX11499359.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX11499359/SRX11499359.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX11499359/SRX11499359.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 02 Aug 2022 18:03:15: #1 read tag files... INFO @ Tue, 02 Aug 2022 18:03:15: #1 read treatment tags... INFO @ Tue, 02 Aug 2022 18:03:19: 4000000 INFO @ Tue, 02 Aug 2022 18:03:25: 1000000 INFO @ Tue, 02 Aug 2022 18:03:28: 5000000 INFO @ Tue, 02 Aug 2022 18:03:36: 2000000 INFO @ Tue, 02 Aug 2022 18:03:36: 6000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.7/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 02 Aug 2022 18:03:45: 7000000 INFO @ Tue, 02 Aug 2022 18:03:45: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX11499359/SRX11499359.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX11499359/SRX11499359.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX11499359/SRX11499359.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX11499359/SRX11499359.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 02 Aug 2022 18:03:45: #1 read tag files... INFO @ Tue, 02 Aug 2022 18:03:45: #1 read treatment tags... INFO @ Tue, 02 Aug 2022 18:03:46: 3000000 INFO @ Tue, 02 Aug 2022 18:03:54: 8000000 INFO @ Tue, 02 Aug 2022 18:03:55: 1000000 INFO @ Tue, 02 Aug 2022 18:03:56: 4000000 INFO @ Tue, 02 Aug 2022 18:04:02: 9000000 INFO @ Tue, 02 Aug 2022 18:04:05: 2000000 INFO @ Tue, 02 Aug 2022 18:04:06: 5000000 INFO @ Tue, 02 Aug 2022 18:04:11: 10000000 INFO @ Tue, 02 Aug 2022 18:04:15: 3000000 INFO @ Tue, 02 Aug 2022 18:04:17: 6000000 INFO @ Tue, 02 Aug 2022 18:04:19: 11000000 INFO @ Tue, 02 Aug 2022 18:04:26: 4000000 INFO @ Tue, 02 Aug 2022 18:04:27: 7000000 INFO @ Tue, 02 Aug 2022 18:04:28: 12000000 INFO @ Tue, 02 Aug 2022 18:04:36: 5000000 INFO @ Tue, 02 Aug 2022 18:04:36: 13000000 INFO @ Tue, 02 Aug 2022 18:04:37: 8000000 INFO @ Tue, 02 Aug 2022 18:04:45: 14000000 INFO @ Tue, 02 Aug 2022 18:04:46: 6000000 INFO @ Tue, 02 Aug 2022 18:04:47: 9000000 INFO @ Tue, 02 Aug 2022 18:04:53: 15000000 INFO @ Tue, 02 Aug 2022 18:04:55: 7000000 INFO @ Tue, 02 Aug 2022 18:04:58: 10000000 INFO @ Tue, 02 Aug 2022 18:05:02: 16000000 INFO @ Tue, 02 Aug 2022 18:05:05: 8000000 INFO @ Tue, 02 Aug 2022 18:05:08: 11000000 INFO @ Tue, 02 Aug 2022 18:05:10: 17000000 INFO @ Tue, 02 Aug 2022 18:05:15: 9000000 INFO @ Tue, 02 Aug 2022 18:05:18: 12000000 INFO @ Tue, 02 Aug 2022 18:05:19: 18000000 INFO @ Tue, 02 Aug 2022 18:05:25: 10000000 INFO @ Tue, 02 Aug 2022 18:05:27: 19000000 INFO @ Tue, 02 Aug 2022 18:05:28: 13000000 INFO @ Tue, 02 Aug 2022 18:05:35: 11000000 INFO @ Tue, 02 Aug 2022 18:05:36: 20000000 INFO @ Tue, 02 Aug 2022 18:05:38: 14000000 INFO @ Tue, 02 Aug 2022 18:05:44: 21000000 INFO @ Tue, 02 Aug 2022 18:05:45: 12000000 INFO @ Tue, 02 Aug 2022 18:05:49: 15000000 INFO @ Tue, 02 Aug 2022 18:05:53: 22000000 INFO @ Tue, 02 Aug 2022 18:05:55: 13000000 INFO @ Tue, 02 Aug 2022 18:05:59: 16000000 INFO @ Tue, 02 Aug 2022 18:06:01: 23000000 INFO @ Tue, 02 Aug 2022 18:06:05: 14000000 INFO @ Tue, 02 Aug 2022 18:06:09: 17000000 INFO @ Tue, 02 Aug 2022 18:06:09: 24000000 INFO @ Tue, 02 Aug 2022 18:06:14: 15000000 INFO @ Tue, 02 Aug 2022 18:06:18: 25000000 INFO @ Tue, 02 Aug 2022 18:06:19: 18000000 INFO @ Tue, 02 Aug 2022 18:06:24: 16000000 INFO @ Tue, 02 Aug 2022 18:06:26: 26000000 INFO @ Tue, 02 Aug 2022 18:06:29: 19000000 INFO @ Tue, 02 Aug 2022 18:06:34: 17000000 INFO @ Tue, 02 Aug 2022 18:06:35: 27000000 INFO @ Tue, 02 Aug 2022 18:06:39: 20000000 INFO @ Tue, 02 Aug 2022 18:06:43: 28000000 INFO @ Tue, 02 Aug 2022 18:06:44: 18000000 INFO @ Tue, 02 Aug 2022 18:06:50: 21000000 INFO @ Tue, 02 Aug 2022 18:06:52: 29000000 INFO @ Tue, 02 Aug 2022 18:06:54: 19000000 INFO @ Tue, 02 Aug 2022 18:07:00: 22000000 INFO @ Tue, 02 Aug 2022 18:07:00: 30000000 INFO @ Tue, 02 Aug 2022 18:07:04: 20000000 INFO @ Tue, 02 Aug 2022 18:07:09: 31000000 INFO @ Tue, 02 Aug 2022 18:07:10: 23000000 INFO @ Tue, 02 Aug 2022 18:07:14: 21000000 INFO @ Tue, 02 Aug 2022 18:07:17: 32000000 INFO @ Tue, 02 Aug 2022 18:07:20: 24000000 INFO @ Tue, 02 Aug 2022 18:07:24: 22000000 INFO @ Tue, 02 Aug 2022 18:07:26: 33000000 INFO @ Tue, 02 Aug 2022 18:07:30: 25000000 INFO @ Tue, 02 Aug 2022 18:07:34: 34000000 INFO @ Tue, 02 Aug 2022 18:07:34: 23000000 INFO @ Tue, 02 Aug 2022 18:07:40: 26000000 INFO @ Tue, 02 Aug 2022 18:07:43: 35000000 INFO @ Tue, 02 Aug 2022 18:07:44: 24000000 INFO @ Tue, 02 Aug 2022 18:07:50: 27000000 INFO @ Tue, 02 Aug 2022 18:07:51: 36000000 INFO @ Tue, 02 Aug 2022 18:07:54: 25000000 INFO @ Tue, 02 Aug 2022 18:08:00: 37000000 INFO @ Tue, 02 Aug 2022 18:08:01: 28000000 INFO @ Tue, 02 Aug 2022 18:08:04: 26000000 INFO @ Tue, 02 Aug 2022 18:08:08: 38000000 INFO @ Tue, 02 Aug 2022 18:08:11: 29000000 INFO @ Tue, 02 Aug 2022 18:08:14: 27000000 INFO @ Tue, 02 Aug 2022 18:08:17: 39000000 INFO @ Tue, 02 Aug 2022 18:08:21: 30000000 INFO @ Tue, 02 Aug 2022 18:08:25: 28000000 INFO @ Tue, 02 Aug 2022 18:08:26: 40000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 02 Aug 2022 18:08:31: 31000000 INFO @ Tue, 02 Aug 2022 18:08:35: 41000000 INFO @ Tue, 02 Aug 2022 18:08:38: 29000000 INFO @ Tue, 02 Aug 2022 18:08:42: 32000000 INFO @ Tue, 02 Aug 2022 18:08:44: 42000000 INFO @ Tue, 02 Aug 2022 18:08:49: 30000000 INFO @ Tue, 02 Aug 2022 18:08:52: 33000000 INFO @ Tue, 02 Aug 2022 18:08:53: 43000000 INFO @ Tue, 02 Aug 2022 18:08:59: 31000000 INFO @ Tue, 02 Aug 2022 18:09:02: 44000000 INFO @ Tue, 02 Aug 2022 18:09:02: 34000000 INFO @ Tue, 02 Aug 2022 18:09:10: 32000000 INFO @ Tue, 02 Aug 2022 18:09:11: 45000000 INFO @ Tue, 02 Aug 2022 18:09:13: 35000000 INFO @ Tue, 02 Aug 2022 18:09:20: 46000000 INFO @ Tue, 02 Aug 2022 18:09:21: 33000000 INFO @ Tue, 02 Aug 2022 18:09:24: 36000000 INFO @ Tue, 02 Aug 2022 18:09:24: #1 tag size is determined as 124 bps INFO @ Tue, 02 Aug 2022 18:09:24: #1 tag size = 124 INFO @ Tue, 02 Aug 2022 18:09:24: #1 total tags in treatment: 20170845 INFO @ Tue, 02 Aug 2022 18:09:24: #1 user defined the maximum tags... INFO @ Tue, 02 Aug 2022 18:09:24: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 02 Aug 2022 18:09:25: #1 tags after filtering in treatment: 18535886 INFO @ Tue, 02 Aug 2022 18:09:25: #1 Redundant rate of treatment: 0.08 INFO @ Tue, 02 Aug 2022 18:09:25: #1 finished! INFO @ Tue, 02 Aug 2022 18:09:25: #2 Build Peak Model... INFO @ Tue, 02 Aug 2022 18:09:25: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 02 Aug 2022 18:09:26: #2 number of paired peaks: 366 WARNING @ Tue, 02 Aug 2022 18:09:26: Fewer paired peaks (366) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 366 pairs to build model! INFO @ Tue, 02 Aug 2022 18:09:26: start model_add_line... INFO @ Tue, 02 Aug 2022 18:09:26: start X-correlation... INFO @ Tue, 02 Aug 2022 18:09:26: end of X-cor INFO @ Tue, 02 Aug 2022 18:09:26: #2 finished! INFO @ Tue, 02 Aug 2022 18:09:26: #2 predicted fragment length is 250 bps INFO @ Tue, 02 Aug 2022 18:09:26: #2 alternative fragment length(s) may be 250 bps INFO @ Tue, 02 Aug 2022 18:09:26: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX11499359/SRX11499359.05_model.r INFO @ Tue, 02 Aug 2022 18:09:26: #3 Call peaks... INFO @ Tue, 02 Aug 2022 18:09:26: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 02 Aug 2022 18:09:31: 34000000 INFO @ Tue, 02 Aug 2022 18:09:36: 37000000 INFO @ Tue, 02 Aug 2022 18:09:41: 35000000 INFO @ Tue, 02 Aug 2022 18:09:46: 38000000 INFO @ Tue, 02 Aug 2022 18:09:51: 36000000 INFO @ Tue, 02 Aug 2022 18:09:56: 39000000 INFO @ Tue, 02 Aug 2022 18:10:01: 37000000 INFO @ Tue, 02 Aug 2022 18:10:02: #3 Call peaks for each chromosome... INFO @ Tue, 02 Aug 2022 18:10:05: 40000000 BigWig に変換しました。 INFO @ Tue, 02 Aug 2022 18:10:11: 38000000 INFO @ Tue, 02 Aug 2022 18:10:15: 41000000 INFO @ Tue, 02 Aug 2022 18:10:20: 39000000 INFO @ Tue, 02 Aug 2022 18:10:21: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX11499359/SRX11499359.05_peaks.xls INFO @ Tue, 02 Aug 2022 18:10:21: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX11499359/SRX11499359.05_peaks.narrowPeak INFO @ Tue, 02 Aug 2022 18:10:21: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX11499359/SRX11499359.05_summits.bed INFO @ Tue, 02 Aug 2022 18:10:21: Done! pass1 - making usageList (15 chroms): 2 millis pass2 - checking and writing primary data (5207 records, 4 fields): 22 millis CompletedMACS2peakCalling INFO @ Tue, 02 Aug 2022 18:10:24: 42000000 INFO @ Tue, 02 Aug 2022 18:10:30: 40000000 INFO @ Tue, 02 Aug 2022 18:10:34: 43000000 INFO @ Tue, 02 Aug 2022 18:10:40: 41000000 INFO @ Tue, 02 Aug 2022 18:10:43: 44000000 INFO @ Tue, 02 Aug 2022 18:10:50: 42000000 INFO @ Tue, 02 Aug 2022 18:10:53: 45000000 INFO @ Tue, 02 Aug 2022 18:11:00: 43000000 INFO @ Tue, 02 Aug 2022 18:11:02: 46000000 INFO @ Tue, 02 Aug 2022 18:11:06: #1 tag size is determined as 124 bps INFO @ Tue, 02 Aug 2022 18:11:06: #1 tag size = 124 INFO @ Tue, 02 Aug 2022 18:11:06: #1 total tags in treatment: 20170845 INFO @ Tue, 02 Aug 2022 18:11:06: #1 user defined the maximum tags... INFO @ Tue, 02 Aug 2022 18:11:06: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 02 Aug 2022 18:11:07: #1 tags after filtering in treatment: 18535886 INFO @ Tue, 02 Aug 2022 18:11:07: #1 Redundant rate of treatment: 0.08 INFO @ Tue, 02 Aug 2022 18:11:07: #1 finished! INFO @ Tue, 02 Aug 2022 18:11:07: #2 Build Peak Model... INFO @ Tue, 02 Aug 2022 18:11:07: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 02 Aug 2022 18:11:08: #2 number of paired peaks: 366 WARNING @ Tue, 02 Aug 2022 18:11:08: Fewer paired peaks (366) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 366 pairs to build model! INFO @ Tue, 02 Aug 2022 18:11:08: start model_add_line... INFO @ Tue, 02 Aug 2022 18:11:08: start X-correlation... INFO @ Tue, 02 Aug 2022 18:11:08: end of X-cor INFO @ Tue, 02 Aug 2022 18:11:08: #2 finished! INFO @ Tue, 02 Aug 2022 18:11:08: #2 predicted fragment length is 250 bps INFO @ Tue, 02 Aug 2022 18:11:08: #2 alternative fragment length(s) may be 250 bps INFO @ Tue, 02 Aug 2022 18:11:08: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX11499359/SRX11499359.10_model.r INFO @ Tue, 02 Aug 2022 18:11:08: #3 Call peaks... INFO @ Tue, 02 Aug 2022 18:11:08: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 02 Aug 2022 18:11:10: 44000000 INFO @ Tue, 02 Aug 2022 18:11:20: 45000000 INFO @ Tue, 02 Aug 2022 18:11:29: 46000000 INFO @ Tue, 02 Aug 2022 18:11:34: #1 tag size is determined as 124 bps INFO @ Tue, 02 Aug 2022 18:11:34: #1 tag size = 124 INFO @ Tue, 02 Aug 2022 18:11:34: #1 total tags in treatment: 20170845 INFO @ Tue, 02 Aug 2022 18:11:34: #1 user defined the maximum tags... INFO @ Tue, 02 Aug 2022 18:11:34: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 02 Aug 2022 18:11:35: #1 tags after filtering in treatment: 18535886 INFO @ Tue, 02 Aug 2022 18:11:35: #1 Redundant rate of treatment: 0.08 INFO @ Tue, 02 Aug 2022 18:11:35: #1 finished! INFO @ Tue, 02 Aug 2022 18:11:35: #2 Build Peak Model... INFO @ Tue, 02 Aug 2022 18:11:35: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 02 Aug 2022 18:11:36: #2 number of paired peaks: 366 WARNING @ Tue, 02 Aug 2022 18:11:36: Fewer paired peaks (366) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 366 pairs to build model! INFO @ Tue, 02 Aug 2022 18:11:36: start model_add_line... INFO @ Tue, 02 Aug 2022 18:11:36: start X-correlation... INFO @ Tue, 02 Aug 2022 18:11:36: end of X-cor INFO @ Tue, 02 Aug 2022 18:11:36: #2 finished! INFO @ Tue, 02 Aug 2022 18:11:36: #2 predicted fragment length is 250 bps INFO @ Tue, 02 Aug 2022 18:11:36: #2 alternative fragment length(s) may be 250 bps INFO @ Tue, 02 Aug 2022 18:11:36: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX11499359/SRX11499359.20_model.r INFO @ Tue, 02 Aug 2022 18:11:36: #3 Call peaks... INFO @ Tue, 02 Aug 2022 18:11:36: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 02 Aug 2022 18:11:51: #3 Call peaks for each chromosome... INFO @ Tue, 02 Aug 2022 18:12:14: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX11499359/SRX11499359.10_peaks.xls INFO @ Tue, 02 Aug 2022 18:12:14: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX11499359/SRX11499359.10_peaks.narrowPeak INFO @ Tue, 02 Aug 2022 18:12:14: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX11499359/SRX11499359.10_summits.bed INFO @ Tue, 02 Aug 2022 18:12:14: Done! pass1 - making usageList (15 chroms): 1 millis pass2 - checking and writing primary data (3199 records, 4 fields): 17 millis CompletedMACS2peakCalling INFO @ Tue, 02 Aug 2022 18:12:19: #3 Call peaks for each chromosome... INFO @ Tue, 02 Aug 2022 18:12:42: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX11499359/SRX11499359.20_peaks.xls INFO @ Tue, 02 Aug 2022 18:12:42: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX11499359/SRX11499359.20_peaks.narrowPeak INFO @ Tue, 02 Aug 2022 18:12:42: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX11499359/SRX11499359.20_summits.bed INFO @ Tue, 02 Aug 2022 18:12:42: Done! pass1 - making usageList (15 chroms): 1 millis pass2 - checking and writing primary data (1785 records, 4 fields): 19 millis CompletedMACS2peakCalling