Job ID = 16439687 SRX = SRX11499358 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 9968531 spots for SRR15192706/SRR15192706.sra Written 9968531 spots for SRR15192706/SRR15192706.sra Read 15400859 spots for SRR15192707/SRR15192707.sra Written 15400859 spots for SRR15192707/SRR15192707.sra fastq に変換しました。 bowtie でマッピング中... Your job 16440201 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:26:30 25369390 reads; of these: 25369390 (100.00%) were paired; of these: 4264521 (16.81%) aligned concordantly 0 times 15768772 (62.16%) aligned concordantly exactly 1 time 5336097 (21.03%) aligned concordantly >1 times ---- 4264521 pairs aligned concordantly 0 times; of these: 2047300 (48.01%) aligned discordantly 1 time ---- 2217221 pairs aligned 0 times concordantly or discordantly; of these: 4434442 mates make up the pairs; of these: 2018886 (45.53%) aligned 0 times 1046566 (23.60%) aligned exactly 1 time 1368990 (30.87%) aligned >1 times 96.02% overall alignment rate Time searching: 01:26:30 Overall time: 01:26:30 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 36 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 2932152 / 21431617 = 0.1368 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.7/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 02 Aug 2022 17:46:33: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX11499358/SRX11499358.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX11499358/SRX11499358.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX11499358/SRX11499358.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX11499358/SRX11499358.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 02 Aug 2022 17:46:33: #1 read tag files... INFO @ Tue, 02 Aug 2022 17:46:33: #1 read treatment tags... INFO @ Tue, 02 Aug 2022 17:46:41: 1000000 INFO @ Tue, 02 Aug 2022 17:46:49: 2000000 INFO @ Tue, 02 Aug 2022 17:46:57: 3000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.7/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 02 Aug 2022 17:47:02: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX11499358/SRX11499358.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX11499358/SRX11499358.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX11499358/SRX11499358.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX11499358/SRX11499358.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 02 Aug 2022 17:47:02: #1 read tag files... INFO @ Tue, 02 Aug 2022 17:47:02: #1 read treatment tags... INFO @ Tue, 02 Aug 2022 17:47:05: 4000000 INFO @ Tue, 02 Aug 2022 17:47:13: 1000000 INFO @ Tue, 02 Aug 2022 17:47:14: 5000000 INFO @ Tue, 02 Aug 2022 17:47:24: 2000000 INFO @ Tue, 02 Aug 2022 17:47:24: 6000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.7/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 02 Aug 2022 17:47:32: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX11499358/SRX11499358.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX11499358/SRX11499358.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX11499358/SRX11499358.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX11499358/SRX11499358.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 02 Aug 2022 17:47:32: #1 read tag files... INFO @ Tue, 02 Aug 2022 17:47:32: #1 read treatment tags... INFO @ Tue, 02 Aug 2022 17:47:33: 7000000 INFO @ Tue, 02 Aug 2022 17:47:35: 3000000 INFO @ Tue, 02 Aug 2022 17:47:42: 1000000 INFO @ Tue, 02 Aug 2022 17:47:43: 8000000 INFO @ Tue, 02 Aug 2022 17:47:45: 4000000 INFO @ Tue, 02 Aug 2022 17:47:51: 2000000 INFO @ Tue, 02 Aug 2022 17:47:53: 9000000 INFO @ Tue, 02 Aug 2022 17:47:56: 5000000 INFO @ Tue, 02 Aug 2022 17:48:01: 3000000 INFO @ Tue, 02 Aug 2022 17:48:02: 10000000 INFO @ Tue, 02 Aug 2022 17:48:07: 6000000 INFO @ Tue, 02 Aug 2022 17:48:11: 4000000 INFO @ Tue, 02 Aug 2022 17:48:12: 11000000 INFO @ Tue, 02 Aug 2022 17:48:18: 7000000 INFO @ Tue, 02 Aug 2022 17:48:20: 5000000 INFO @ Tue, 02 Aug 2022 17:48:22: 12000000 INFO @ Tue, 02 Aug 2022 17:48:29: 8000000 INFO @ Tue, 02 Aug 2022 17:48:30: 6000000 INFO @ Tue, 02 Aug 2022 17:48:31: 13000000 INFO @ Tue, 02 Aug 2022 17:48:39: 7000000 INFO @ Tue, 02 Aug 2022 17:48:40: 9000000 INFO @ Tue, 02 Aug 2022 17:48:41: 14000000 INFO @ Tue, 02 Aug 2022 17:48:49: 8000000 INFO @ Tue, 02 Aug 2022 17:48:51: 10000000 INFO @ Tue, 02 Aug 2022 17:48:51: 15000000 INFO @ Tue, 02 Aug 2022 17:48:58: 9000000 INFO @ Tue, 02 Aug 2022 17:49:00: 16000000 INFO @ Tue, 02 Aug 2022 17:49:01: 11000000 INFO @ Tue, 02 Aug 2022 17:49:08: 10000000 INFO @ Tue, 02 Aug 2022 17:49:10: 17000000 INFO @ Tue, 02 Aug 2022 17:49:12: 12000000 INFO @ Tue, 02 Aug 2022 17:49:17: 11000000 INFO @ Tue, 02 Aug 2022 17:49:19: 18000000 INFO @ Tue, 02 Aug 2022 17:49:23: 13000000 INFO @ Tue, 02 Aug 2022 17:49:27: 12000000 INFO @ Tue, 02 Aug 2022 17:49:29: 19000000 INFO @ Tue, 02 Aug 2022 17:49:34: 14000000 INFO @ Tue, 02 Aug 2022 17:49:36: 13000000 INFO @ Tue, 02 Aug 2022 17:49:38: 20000000 INFO @ Tue, 02 Aug 2022 17:49:45: 15000000 INFO @ Tue, 02 Aug 2022 17:49:46: 14000000 INFO @ Tue, 02 Aug 2022 17:49:48: 21000000 INFO @ Tue, 02 Aug 2022 17:49:55: 15000000 INFO @ Tue, 02 Aug 2022 17:49:56: 16000000 INFO @ Tue, 02 Aug 2022 17:49:57: 22000000 INFO @ Tue, 02 Aug 2022 17:50:05: 16000000 INFO @ Tue, 02 Aug 2022 17:50:06: 23000000 INFO @ Tue, 02 Aug 2022 17:50:07: 17000000 INFO @ Tue, 02 Aug 2022 17:50:14: 17000000 INFO @ Tue, 02 Aug 2022 17:50:16: 24000000 INFO @ Tue, 02 Aug 2022 17:50:17: 18000000 INFO @ Tue, 02 Aug 2022 17:50:24: 18000000 INFO @ Tue, 02 Aug 2022 17:50:25: 25000000 INFO @ Tue, 02 Aug 2022 17:50:27: 19000000 INFO @ Tue, 02 Aug 2022 17:50:33: 19000000 INFO @ Tue, 02 Aug 2022 17:50:35: 26000000 INFO @ Tue, 02 Aug 2022 17:50:37: 20000000 INFO @ Tue, 02 Aug 2022 17:50:43: 20000000 INFO @ Tue, 02 Aug 2022 17:50:45: 27000000 INFO @ Tue, 02 Aug 2022 17:50:48: 21000000 INFO @ Tue, 02 Aug 2022 17:50:53: 21000000 INFO @ Tue, 02 Aug 2022 17:50:54: 28000000 INFO @ Tue, 02 Aug 2022 17:50:58: 22000000 INFO @ Tue, 02 Aug 2022 17:51:02: 22000000 INFO @ Tue, 02 Aug 2022 17:51:04: 29000000 INFO @ Tue, 02 Aug 2022 17:51:08: 23000000 INFO @ Tue, 02 Aug 2022 17:51:12: 23000000 INFO @ Tue, 02 Aug 2022 17:51:13: 30000000 INFO @ Tue, 02 Aug 2022 17:51:19: 24000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 02 Aug 2022 17:51:21: 24000000 INFO @ Tue, 02 Aug 2022 17:51:23: 31000000 INFO @ Tue, 02 Aug 2022 17:51:29: 25000000 INFO @ Tue, 02 Aug 2022 17:51:31: 25000000 INFO @ Tue, 02 Aug 2022 17:51:32: 32000000 INFO @ Tue, 02 Aug 2022 17:51:40: 26000000 INFO @ Tue, 02 Aug 2022 17:51:41: 26000000 INFO @ Tue, 02 Aug 2022 17:51:41: 33000000 INFO @ Tue, 02 Aug 2022 17:51:51: 34000000 INFO @ Tue, 02 Aug 2022 17:51:52: 27000000 INFO @ Tue, 02 Aug 2022 17:51:52: 27000000 INFO @ Tue, 02 Aug 2022 17:52:00: 35000000 INFO @ Tue, 02 Aug 2022 17:52:03: 28000000 INFO @ Tue, 02 Aug 2022 17:52:03: 28000000 INFO @ Tue, 02 Aug 2022 17:52:09: 36000000 INFO @ Tue, 02 Aug 2022 17:52:14: 29000000 INFO @ Tue, 02 Aug 2022 17:52:14: 29000000 INFO @ Tue, 02 Aug 2022 17:52:18: 37000000 INFO @ Tue, 02 Aug 2022 17:52:25: 30000000 INFO @ Tue, 02 Aug 2022 17:52:26: 30000000 INFO @ Tue, 02 Aug 2022 17:52:28: 38000000 INFO @ Tue, 02 Aug 2022 17:52:36: 31000000 INFO @ Tue, 02 Aug 2022 17:52:37: 31000000 INFO @ Tue, 02 Aug 2022 17:52:37: 39000000 BigWig に変換しました。 INFO @ Tue, 02 Aug 2022 17:52:47: 40000000 INFO @ Tue, 02 Aug 2022 17:52:47: 32000000 INFO @ Tue, 02 Aug 2022 17:52:48: 32000000 INFO @ Tue, 02 Aug 2022 17:52:56: 41000000 INFO @ Tue, 02 Aug 2022 17:52:58: 33000000 INFO @ Tue, 02 Aug 2022 17:52:59: 33000000 INFO @ Tue, 02 Aug 2022 17:53:05: 42000000 INFO @ Tue, 02 Aug 2022 17:53:09: 34000000 INFO @ Tue, 02 Aug 2022 17:53:10: 34000000 INFO @ Tue, 02 Aug 2022 17:53:14: #1 tag size is determined as 144 bps INFO @ Tue, 02 Aug 2022 17:53:14: #1 tag size = 144 INFO @ Tue, 02 Aug 2022 17:53:14: #1 total tags in treatment: 18295902 INFO @ Tue, 02 Aug 2022 17:53:14: #1 user defined the maximum tags... INFO @ Tue, 02 Aug 2022 17:53:14: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 02 Aug 2022 17:53:14: #1 tags after filtering in treatment: 16739354 INFO @ Tue, 02 Aug 2022 17:53:14: #1 Redundant rate of treatment: 0.09 INFO @ Tue, 02 Aug 2022 17:53:14: #1 finished! INFO @ Tue, 02 Aug 2022 17:53:14: #2 Build Peak Model... INFO @ Tue, 02 Aug 2022 17:53:14: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 02 Aug 2022 17:53:15: #2 number of paired peaks: 532 WARNING @ Tue, 02 Aug 2022 17:53:15: Fewer paired peaks (532) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 532 pairs to build model! INFO @ Tue, 02 Aug 2022 17:53:15: start model_add_line... INFO @ Tue, 02 Aug 2022 17:53:15: start X-correlation... INFO @ Tue, 02 Aug 2022 17:53:15: end of X-cor INFO @ Tue, 02 Aug 2022 17:53:15: #2 finished! INFO @ Tue, 02 Aug 2022 17:53:15: #2 predicted fragment length is 250 bps INFO @ Tue, 02 Aug 2022 17:53:15: #2 alternative fragment length(s) may be 250 bps INFO @ Tue, 02 Aug 2022 17:53:15: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX11499358/SRX11499358.05_model.r WARNING @ Tue, 02 Aug 2022 17:53:15: #2 Since the d (250) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 02 Aug 2022 17:53:15: #2 You may need to consider one of the other alternative d(s): 250 WARNING @ Tue, 02 Aug 2022 17:53:15: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 02 Aug 2022 17:53:15: #3 Call peaks... INFO @ Tue, 02 Aug 2022 17:53:15: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 02 Aug 2022 17:53:20: 35000000 INFO @ Tue, 02 Aug 2022 17:53:21: 35000000 INFO @ Tue, 02 Aug 2022 17:53:31: 36000000 INFO @ Tue, 02 Aug 2022 17:53:31: 36000000 INFO @ Tue, 02 Aug 2022 17:53:42: 37000000 INFO @ Tue, 02 Aug 2022 17:53:42: 37000000 INFO @ Tue, 02 Aug 2022 17:53:47: #3 Call peaks for each chromosome... INFO @ Tue, 02 Aug 2022 17:53:53: 38000000 INFO @ Tue, 02 Aug 2022 17:53:53: 38000000 INFO @ Tue, 02 Aug 2022 17:54:04: 39000000 INFO @ Tue, 02 Aug 2022 17:54:04: 39000000 INFO @ Tue, 02 Aug 2022 17:54:04: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX11499358/SRX11499358.05_peaks.xls INFO @ Tue, 02 Aug 2022 17:54:05: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX11499358/SRX11499358.05_peaks.narrowPeak INFO @ Tue, 02 Aug 2022 17:54:05: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX11499358/SRX11499358.05_summits.bed INFO @ Tue, 02 Aug 2022 17:54:05: Done! pass1 - making usageList (15 chroms): 2 millis pass2 - checking and writing primary data (5867 records, 4 fields): 33 millis CompletedMACS2peakCalling INFO @ Tue, 02 Aug 2022 17:54:15: 40000000 INFO @ Tue, 02 Aug 2022 17:54:15: 40000000 INFO @ Tue, 02 Aug 2022 17:54:26: 41000000 INFO @ Tue, 02 Aug 2022 17:54:26: 41000000 INFO @ Tue, 02 Aug 2022 17:54:37: 42000000 INFO @ Tue, 02 Aug 2022 17:54:37: 42000000 INFO @ Tue, 02 Aug 2022 17:54:46: #1 tag size is determined as 144 bps INFO @ Tue, 02 Aug 2022 17:54:46: #1 tag size = 144 INFO @ Tue, 02 Aug 2022 17:54:46: #1 total tags in treatment: 18295902 INFO @ Tue, 02 Aug 2022 17:54:46: #1 user defined the maximum tags... INFO @ Tue, 02 Aug 2022 17:54:46: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 02 Aug 2022 17:54:47: #1 tags after filtering in treatment: 16739354 INFO @ Tue, 02 Aug 2022 17:54:47: #1 Redundant rate of treatment: 0.09 INFO @ Tue, 02 Aug 2022 17:54:47: #1 finished! INFO @ Tue, 02 Aug 2022 17:54:47: #2 Build Peak Model... INFO @ Tue, 02 Aug 2022 17:54:47: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 02 Aug 2022 17:54:47: #1 tag size is determined as 144 bps INFO @ Tue, 02 Aug 2022 17:54:47: #1 tag size = 144 INFO @ Tue, 02 Aug 2022 17:54:47: #1 total tags in treatment: 18295902 INFO @ Tue, 02 Aug 2022 17:54:47: #1 user defined the maximum tags... INFO @ Tue, 02 Aug 2022 17:54:47: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 02 Aug 2022 17:54:47: #1 tags after filtering in treatment: 16739354 INFO @ Tue, 02 Aug 2022 17:54:47: #1 Redundant rate of treatment: 0.09 INFO @ Tue, 02 Aug 2022 17:54:47: #1 finished! INFO @ Tue, 02 Aug 2022 17:54:47: #2 Build Peak Model... INFO @ Tue, 02 Aug 2022 17:54:47: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 02 Aug 2022 17:54:48: #2 number of paired peaks: 532 WARNING @ Tue, 02 Aug 2022 17:54:48: Fewer paired peaks (532) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 532 pairs to build model! INFO @ Tue, 02 Aug 2022 17:54:48: start model_add_line... INFO @ Tue, 02 Aug 2022 17:54:48: start X-correlation... INFO @ Tue, 02 Aug 2022 17:54:48: end of X-cor INFO @ Tue, 02 Aug 2022 17:54:48: #2 finished! INFO @ Tue, 02 Aug 2022 17:54:48: #2 predicted fragment length is 250 bps INFO @ Tue, 02 Aug 2022 17:54:48: #2 alternative fragment length(s) may be 250 bps INFO @ Tue, 02 Aug 2022 17:54:48: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX11499358/SRX11499358.10_model.r WARNING @ Tue, 02 Aug 2022 17:54:48: #2 Since the d (250) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 02 Aug 2022 17:54:48: #2 You may need to consider one of the other alternative d(s): 250 WARNING @ Tue, 02 Aug 2022 17:54:48: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 02 Aug 2022 17:54:48: #3 Call peaks... INFO @ Tue, 02 Aug 2022 17:54:48: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 02 Aug 2022 17:54:48: #2 number of paired peaks: 532 WARNING @ Tue, 02 Aug 2022 17:54:48: Fewer paired peaks (532) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 532 pairs to build model! INFO @ Tue, 02 Aug 2022 17:54:48: start model_add_line... INFO @ Tue, 02 Aug 2022 17:54:48: start X-correlation... INFO @ Tue, 02 Aug 2022 17:54:48: end of X-cor INFO @ Tue, 02 Aug 2022 17:54:48: #2 finished! INFO @ Tue, 02 Aug 2022 17:54:48: #2 predicted fragment length is 250 bps INFO @ Tue, 02 Aug 2022 17:54:48: #2 alternative fragment length(s) may be 250 bps INFO @ Tue, 02 Aug 2022 17:54:48: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX11499358/SRX11499358.20_model.r WARNING @ Tue, 02 Aug 2022 17:54:49: #2 Since the d (250) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 02 Aug 2022 17:54:49: #2 You may need to consider one of the other alternative d(s): 250 WARNING @ Tue, 02 Aug 2022 17:54:49: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 02 Aug 2022 17:54:49: #3 Call peaks... INFO @ Tue, 02 Aug 2022 17:54:49: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 02 Aug 2022 17:55:21: #3 Call peaks for each chromosome... INFO @ Tue, 02 Aug 2022 17:55:21: #3 Call peaks for each chromosome... INFO @ Tue, 02 Aug 2022 17:55:37: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX11499358/SRX11499358.10_peaks.xls INFO @ Tue, 02 Aug 2022 17:55:37: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX11499358/SRX11499358.10_peaks.narrowPeak INFO @ Tue, 02 Aug 2022 17:55:37: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX11499358/SRX11499358.10_summits.bed INFO @ Tue, 02 Aug 2022 17:55:37: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX11499358/SRX11499358.20_peaks.xls INFO @ Tue, 02 Aug 2022 17:55:37: Done! INFO @ Tue, 02 Aug 2022 17:55:37: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX11499358/SRX11499358.20_peaks.narrowPeak INFO @ Tue, 02 Aug 2022 17:55:38: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX11499358/SRX11499358.20_summits.bed INFO @ Tue, 02 Aug 2022 17:55:38: Done! pass1 - making usageList (15 chroms): 1 millis pass2 - checking and writing primary data (3782 records, 4 fields): 33 millis CompletedMACS2peakCalling pass1 - making usageList (15 chroms): 1 millis pass2 - checking and writing primary data (2125 records, 4 fields): 17 millis CompletedMACS2peakCalling