Job ID = 16439418 SRX = SRX11245079 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2022-08-02T06:06:23 prefetch.2.10.7: 1) Downloading 'SRR14932344'... 2022-08-02T06:06:23 prefetch.2.10.7: Downloading via HTTPS... 2022-08-02T06:07:33 prefetch.2.10.7: HTTPS download succeed 2022-08-02T06:07:33 prefetch.2.10.7: 1) 'SRR14932344' was downloaded successfully 2022-08-02T06:07:33 prefetch.2.10.7: 'SRR14932344' has 0 unresolved dependencies Read 31322020 spots for SRR14932344/SRR14932344.sra Written 31322020 spots for SRR14932344/SRR14932344.sra fastq に変換しました。 bowtie でマッピング中... Your job 16441192 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 03:38:04 31322020 reads; of these: 31322020 (100.00%) were paired; of these: 8698298 (27.77%) aligned concordantly 0 times 16377600 (52.29%) aligned concordantly exactly 1 time 6246122 (19.94%) aligned concordantly >1 times ---- 8698298 pairs aligned concordantly 0 times; of these: 3256246 (37.44%) aligned discordantly 1 time ---- 5442052 pairs aligned 0 times concordantly or discordantly; of these: 10884104 mates make up the pairs; of these: 7563996 (69.50%) aligned 0 times 902252 (8.29%) aligned exactly 1 time 2417856 (22.21%) aligned >1 times 87.93% overall alignment rate Time searching: 03:38:04 Overall time: 03:38:04 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 40 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 8811976 / 25783330 = 0.3418 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.7/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 02 Aug 2022 19:18:48: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX11245079/SRX11245079.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX11245079/SRX11245079.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX11245079/SRX11245079.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX11245079/SRX11245079.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 02 Aug 2022 19:18:48: #1 read tag files... INFO @ Tue, 02 Aug 2022 19:18:48: #1 read treatment tags... INFO @ Tue, 02 Aug 2022 19:19:06: 1000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.7/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 02 Aug 2022 19:19:18: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX11245079/SRX11245079.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX11245079/SRX11245079.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX11245079/SRX11245079.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX11245079/SRX11245079.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 02 Aug 2022 19:19:18: #1 read tag files... INFO @ Tue, 02 Aug 2022 19:19:18: #1 read treatment tags... INFO @ Tue, 02 Aug 2022 19:19:24: 2000000 INFO @ Tue, 02 Aug 2022 19:19:37: 1000000 INFO @ Tue, 02 Aug 2022 19:19:42: 3000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.7/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 02 Aug 2022 19:19:48: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX11245079/SRX11245079.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX11245079/SRX11245079.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX11245079/SRX11245079.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX11245079/SRX11245079.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 02 Aug 2022 19:19:48: #1 read tag files... INFO @ Tue, 02 Aug 2022 19:19:48: #1 read treatment tags... INFO @ Tue, 02 Aug 2022 19:19:56: 2000000 INFO @ Tue, 02 Aug 2022 19:20:01: 4000000 INFO @ Tue, 02 Aug 2022 19:20:07: 1000000 INFO @ Tue, 02 Aug 2022 19:20:16: 3000000 INFO @ Tue, 02 Aug 2022 19:20:19: 5000000 INFO @ Tue, 02 Aug 2022 19:20:25: 2000000 INFO @ Tue, 02 Aug 2022 19:20:35: 4000000 INFO @ Tue, 02 Aug 2022 19:20:37: 6000000 INFO @ Tue, 02 Aug 2022 19:20:42: 3000000 INFO @ Tue, 02 Aug 2022 19:20:54: 5000000 INFO @ Tue, 02 Aug 2022 19:20:54: 7000000 INFO @ Tue, 02 Aug 2022 19:21:00: 4000000 INFO @ Tue, 02 Aug 2022 19:21:12: 8000000 INFO @ Tue, 02 Aug 2022 19:21:13: 6000000 INFO @ Tue, 02 Aug 2022 19:21:18: 5000000 INFO @ Tue, 02 Aug 2022 19:21:30: 9000000 INFO @ Tue, 02 Aug 2022 19:21:32: 7000000 INFO @ Tue, 02 Aug 2022 19:21:36: 6000000 INFO @ Tue, 02 Aug 2022 19:21:49: 10000000 INFO @ Tue, 02 Aug 2022 19:21:50: 8000000 INFO @ Tue, 02 Aug 2022 19:21:53: 7000000 INFO @ Tue, 02 Aug 2022 19:22:07: 11000000 INFO @ Tue, 02 Aug 2022 19:22:08: 9000000 INFO @ Tue, 02 Aug 2022 19:22:09: 8000000 INFO @ Tue, 02 Aug 2022 19:22:24: 12000000 INFO @ Tue, 02 Aug 2022 19:22:24: 9000000 INFO @ Tue, 02 Aug 2022 19:22:27: 10000000 INFO @ Tue, 02 Aug 2022 19:22:41: 13000000 INFO @ Tue, 02 Aug 2022 19:22:42: 10000000 INFO @ Tue, 02 Aug 2022 19:22:45: 11000000 INFO @ Tue, 02 Aug 2022 19:22:59: 14000000 INFO @ Tue, 02 Aug 2022 19:22:59: 11000000 INFO @ Tue, 02 Aug 2022 19:23:03: 12000000 INFO @ Tue, 02 Aug 2022 19:23:16: 12000000 INFO @ Tue, 02 Aug 2022 19:23:16: 15000000 INFO @ Tue, 02 Aug 2022 19:23:20: 13000000 INFO @ Tue, 02 Aug 2022 19:23:32: 13000000 INFO @ Tue, 02 Aug 2022 19:23:32: 16000000 INFO @ Tue, 02 Aug 2022 19:23:38: 14000000 INFO @ Tue, 02 Aug 2022 19:23:49: 14000000 INFO @ Tue, 02 Aug 2022 19:23:50: 17000000 INFO @ Tue, 02 Aug 2022 19:23:55: 15000000 INFO @ Tue, 02 Aug 2022 19:24:06: 15000000 INFO @ Tue, 02 Aug 2022 19:24:07: 18000000 INFO @ Tue, 02 Aug 2022 19:24:13: 16000000 INFO @ Tue, 02 Aug 2022 19:24:22: 16000000 INFO @ Tue, 02 Aug 2022 19:24:23: 19000000 INFO @ Tue, 02 Aug 2022 19:24:31: 17000000 INFO @ Tue, 02 Aug 2022 19:24:39: 17000000 INFO @ Tue, 02 Aug 2022 19:24:40: 20000000 INFO @ Tue, 02 Aug 2022 19:24:48: 18000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 02 Aug 2022 19:24:55: 18000000 INFO @ Tue, 02 Aug 2022 19:24:57: 21000000 INFO @ Tue, 02 Aug 2022 19:25:06: 19000000 INFO @ Tue, 02 Aug 2022 19:25:12: 19000000 INFO @ Tue, 02 Aug 2022 19:25:14: 22000000 INFO @ Tue, 02 Aug 2022 19:25:23: 20000000 INFO @ Tue, 02 Aug 2022 19:25:28: 20000000 INFO @ Tue, 02 Aug 2022 19:25:30: 23000000 INFO @ Tue, 02 Aug 2022 19:25:40: 21000000 INFO @ Tue, 02 Aug 2022 19:25:43: 21000000 INFO @ Tue, 02 Aug 2022 19:25:47: 24000000 INFO @ Tue, 02 Aug 2022 19:25:58: 22000000 INFO @ Tue, 02 Aug 2022 19:26:00: 22000000 INFO @ Tue, 02 Aug 2022 19:26:05: 25000000 INFO @ Tue, 02 Aug 2022 19:26:16: 23000000 INFO @ Tue, 02 Aug 2022 19:26:16: 23000000 INFO @ Tue, 02 Aug 2022 19:26:23: 26000000 INFO @ Tue, 02 Aug 2022 19:26:33: 24000000 INFO @ Tue, 02 Aug 2022 19:26:34: 24000000 INFO @ Tue, 02 Aug 2022 19:26:42: 27000000 BigWig に変換しました。 INFO @ Tue, 02 Aug 2022 19:26:51: 25000000 INFO @ Tue, 02 Aug 2022 19:26:53: 25000000 INFO @ Tue, 02 Aug 2022 19:27:00: 28000000 INFO @ Tue, 02 Aug 2022 19:27:09: 26000000 INFO @ Tue, 02 Aug 2022 19:27:12: 26000000 INFO @ Tue, 02 Aug 2022 19:27:17: 29000000 INFO @ Tue, 02 Aug 2022 19:27:27: 27000000 INFO @ Tue, 02 Aug 2022 19:27:31: 27000000 INFO @ Tue, 02 Aug 2022 19:27:34: 30000000 INFO @ Tue, 02 Aug 2022 19:27:45: 28000000 INFO @ Tue, 02 Aug 2022 19:27:50: 28000000 INFO @ Tue, 02 Aug 2022 19:27:52: 31000000 INFO @ Tue, 02 Aug 2022 19:28:02: 29000000 INFO @ Tue, 02 Aug 2022 19:28:09: 29000000 INFO @ Tue, 02 Aug 2022 19:28:13: 32000000 INFO @ Tue, 02 Aug 2022 19:28:22: 30000000 INFO @ Tue, 02 Aug 2022 19:28:27: 30000000 INFO @ Tue, 02 Aug 2022 19:28:34: 33000000 INFO @ Tue, 02 Aug 2022 19:28:41: 31000000 INFO @ Tue, 02 Aug 2022 19:28:44: 31000000 INFO @ Tue, 02 Aug 2022 19:28:57: 34000000 INFO @ Tue, 02 Aug 2022 19:29:02: 32000000 INFO @ Tue, 02 Aug 2022 19:29:04: 32000000 INFO @ Tue, 02 Aug 2022 19:29:17: 35000000 INFO @ Tue, 02 Aug 2022 19:29:19: 33000000 INFO @ Tue, 02 Aug 2022 19:29:25: 33000000 INFO @ Tue, 02 Aug 2022 19:29:34: 36000000 INFO @ Tue, 02 Aug 2022 19:29:35: 34000000 INFO @ Tue, 02 Aug 2022 19:29:45: 34000000 INFO @ Tue, 02 Aug 2022 19:29:51: 35000000 INFO @ Tue, 02 Aug 2022 19:29:51: 37000000 INFO @ Tue, 02 Aug 2022 19:29:59: #1 tag size is determined as 150 bps INFO @ Tue, 02 Aug 2022 19:29:59: #1 tag size = 150 INFO @ Tue, 02 Aug 2022 19:29:59: #1 total tags in treatment: 14992329 INFO @ Tue, 02 Aug 2022 19:29:59: #1 user defined the maximum tags... INFO @ Tue, 02 Aug 2022 19:29:59: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 02 Aug 2022 19:29:59: #1 tags after filtering in treatment: 13883292 INFO @ Tue, 02 Aug 2022 19:29:59: #1 Redundant rate of treatment: 0.07 INFO @ Tue, 02 Aug 2022 19:29:59: #1 finished! INFO @ Tue, 02 Aug 2022 19:29:59: #2 Build Peak Model... INFO @ Tue, 02 Aug 2022 19:29:59: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 02 Aug 2022 19:30:01: #2 number of paired peaks: 179 WARNING @ Tue, 02 Aug 2022 19:30:01: Fewer paired peaks (179) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 179 pairs to build model! INFO @ Tue, 02 Aug 2022 19:30:01: start model_add_line... INFO @ Tue, 02 Aug 2022 19:30:01: start X-correlation... INFO @ Tue, 02 Aug 2022 19:30:01: end of X-cor INFO @ Tue, 02 Aug 2022 19:30:01: #2 finished! INFO @ Tue, 02 Aug 2022 19:30:01: #2 predicted fragment length is 190 bps INFO @ Tue, 02 Aug 2022 19:30:01: #2 alternative fragment length(s) may be 190 bps INFO @ Tue, 02 Aug 2022 19:30:01: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX11245079/SRX11245079.05_model.r WARNING @ Tue, 02 Aug 2022 19:30:01: #2 Since the d (190) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 02 Aug 2022 19:30:01: #2 You may need to consider one of the other alternative d(s): 190 WARNING @ Tue, 02 Aug 2022 19:30:01: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 02 Aug 2022 19:30:01: #3 Call peaks... INFO @ Tue, 02 Aug 2022 19:30:01: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 02 Aug 2022 19:30:03: 35000000 INFO @ Tue, 02 Aug 2022 19:30:05: 36000000 INFO @ Tue, 02 Aug 2022 19:30:20: 36000000 INFO @ Tue, 02 Aug 2022 19:30:20: 37000000 INFO @ Tue, 02 Aug 2022 19:30:27: #1 tag size is determined as 150 bps INFO @ Tue, 02 Aug 2022 19:30:27: #1 tag size = 150 INFO @ Tue, 02 Aug 2022 19:30:27: #1 total tags in treatment: 14992329 INFO @ Tue, 02 Aug 2022 19:30:27: #1 user defined the maximum tags... INFO @ Tue, 02 Aug 2022 19:30:27: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 02 Aug 2022 19:30:27: #1 tags after filtering in treatment: 13883292 INFO @ Tue, 02 Aug 2022 19:30:27: #1 Redundant rate of treatment: 0.07 INFO @ Tue, 02 Aug 2022 19:30:27: #1 finished! INFO @ Tue, 02 Aug 2022 19:30:27: #2 Build Peak Model... INFO @ Tue, 02 Aug 2022 19:30:27: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 02 Aug 2022 19:30:28: #2 number of paired peaks: 179 WARNING @ Tue, 02 Aug 2022 19:30:28: Fewer paired peaks (179) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 179 pairs to build model! INFO @ Tue, 02 Aug 2022 19:30:28: start model_add_line... INFO @ Tue, 02 Aug 2022 19:30:29: start X-correlation... INFO @ Tue, 02 Aug 2022 19:30:29: end of X-cor INFO @ Tue, 02 Aug 2022 19:30:29: #2 finished! INFO @ Tue, 02 Aug 2022 19:30:29: #2 predicted fragment length is 190 bps INFO @ Tue, 02 Aug 2022 19:30:29: #2 alternative fragment length(s) may be 190 bps INFO @ Tue, 02 Aug 2022 19:30:29: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX11245079/SRX11245079.10_model.r WARNING @ Tue, 02 Aug 2022 19:30:29: #2 Since the d (190) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 02 Aug 2022 19:30:29: #2 You may need to consider one of the other alternative d(s): 190 WARNING @ Tue, 02 Aug 2022 19:30:29: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 02 Aug 2022 19:30:29: #3 Call peaks... INFO @ Tue, 02 Aug 2022 19:30:29: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 02 Aug 2022 19:30:35: 37000000 INFO @ Tue, 02 Aug 2022 19:30:40: #3 Call peaks for each chromosome... INFO @ Tue, 02 Aug 2022 19:30:42: #1 tag size is determined as 150 bps INFO @ Tue, 02 Aug 2022 19:30:42: #1 tag size = 150 INFO @ Tue, 02 Aug 2022 19:30:42: #1 total tags in treatment: 14992329 INFO @ Tue, 02 Aug 2022 19:30:42: #1 user defined the maximum tags... INFO @ Tue, 02 Aug 2022 19:30:42: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 02 Aug 2022 19:30:43: #1 tags after filtering in treatment: 13883292 INFO @ Tue, 02 Aug 2022 19:30:43: #1 Redundant rate of treatment: 0.07 INFO @ Tue, 02 Aug 2022 19:30:43: #1 finished! INFO @ Tue, 02 Aug 2022 19:30:43: #2 Build Peak Model... INFO @ Tue, 02 Aug 2022 19:30:43: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 02 Aug 2022 19:30:44: #2 number of paired peaks: 179 WARNING @ Tue, 02 Aug 2022 19:30:44: Fewer paired peaks (179) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 179 pairs to build model! INFO @ Tue, 02 Aug 2022 19:30:44: start model_add_line... INFO @ Tue, 02 Aug 2022 19:30:44: start X-correlation... INFO @ Tue, 02 Aug 2022 19:30:44: end of X-cor INFO @ Tue, 02 Aug 2022 19:30:44: #2 finished! INFO @ Tue, 02 Aug 2022 19:30:44: #2 predicted fragment length is 190 bps INFO @ Tue, 02 Aug 2022 19:30:44: #2 alternative fragment length(s) may be 190 bps INFO @ Tue, 02 Aug 2022 19:30:44: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX11245079/SRX11245079.20_model.r WARNING @ Tue, 02 Aug 2022 19:30:44: #2 Since the d (190) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 02 Aug 2022 19:30:44: #2 You may need to consider one of the other alternative d(s): 190 WARNING @ Tue, 02 Aug 2022 19:30:44: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 02 Aug 2022 19:30:44: #3 Call peaks... INFO @ Tue, 02 Aug 2022 19:30:44: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 02 Aug 2022 19:31:03: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX11245079/SRX11245079.05_peaks.xls INFO @ Tue, 02 Aug 2022 19:31:03: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX11245079/SRX11245079.05_peaks.narrowPeak INFO @ Tue, 02 Aug 2022 19:31:03: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX11245079/SRX11245079.05_summits.bed INFO @ Tue, 02 Aug 2022 19:31:03: Done! pass1 - making usageList (14 chroms): 2 millis pass2 - checking and writing primary data (5789 records, 4 fields): 12 millis CompletedMACS2peakCalling INFO @ Tue, 02 Aug 2022 19:31:08: #3 Call peaks for each chromosome... INFO @ Tue, 02 Aug 2022 19:31:24: #3 Call peaks for each chromosome... INFO @ Tue, 02 Aug 2022 19:31:30: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX11245079/SRX11245079.10_peaks.xls INFO @ Tue, 02 Aug 2022 19:31:30: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX11245079/SRX11245079.10_peaks.narrowPeak INFO @ Tue, 02 Aug 2022 19:31:30: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX11245079/SRX11245079.10_summits.bed INFO @ Tue, 02 Aug 2022 19:31:30: Done! pass1 - making usageList (14 chroms): 1 millis pass2 - checking and writing primary data (3053 records, 4 fields): 15 millis CompletedMACS2peakCalling INFO @ Tue, 02 Aug 2022 19:31:46: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX11245079/SRX11245079.20_peaks.xls INFO @ Tue, 02 Aug 2022 19:31:46: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX11245079/SRX11245079.20_peaks.narrowPeak INFO @ Tue, 02 Aug 2022 19:31:46: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX11245079/SRX11245079.20_summits.bed INFO @ Tue, 02 Aug 2022 19:31:46: Done! pass1 - making usageList (14 chroms): 1 millis pass2 - checking and writing primary data (1265 records, 4 fields): 4 millis CompletedMACS2peakCalling