Job ID = 16440062 SRX = SRX10855776 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 26185460 spots for SRR14509963/SRR14509963.sra Written 26185460 spots for SRR14509963/SRR14509963.sra fastq に変換しました。 bowtie でマッピング中... Your job 16440850 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:03:17 26185460 reads; of these: 26185460 (100.00%) were paired; of these: 2297341 (8.77%) aligned concordantly 0 times 17615888 (67.27%) aligned concordantly exactly 1 time 6272231 (23.95%) aligned concordantly >1 times ---- 2297341 pairs aligned concordantly 0 times; of these: 484273 (21.08%) aligned discordantly 1 time ---- 1813068 pairs aligned 0 times concordantly or discordantly; of these: 3626136 mates make up the pairs; of these: 2134880 (58.87%) aligned 0 times 1023660 (28.23%) aligned exactly 1 time 467596 (12.90%) aligned >1 times 95.92% overall alignment rate Time searching: 01:03:17 Overall time: 01:03:17 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 24 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 2818818 / 24309154 = 0.1160 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.7/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 02 Aug 2022 18:13:37: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX10855776/SRX10855776.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX10855776/SRX10855776.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX10855776/SRX10855776.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX10855776/SRX10855776.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 02 Aug 2022 18:13:37: #1 read tag files... INFO @ Tue, 02 Aug 2022 18:13:37: #1 read treatment tags... INFO @ Tue, 02 Aug 2022 18:13:44: 1000000 INFO @ Tue, 02 Aug 2022 18:13:50: 2000000 INFO @ Tue, 02 Aug 2022 18:13:57: 3000000 INFO @ Tue, 02 Aug 2022 18:14:03: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.7/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 02 Aug 2022 18:14:07: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX10855776/SRX10855776.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX10855776/SRX10855776.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX10855776/SRX10855776.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX10855776/SRX10855776.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 02 Aug 2022 18:14:07: #1 read tag files... INFO @ Tue, 02 Aug 2022 18:14:07: #1 read treatment tags... INFO @ Tue, 02 Aug 2022 18:14:11: 5000000 INFO @ Tue, 02 Aug 2022 18:14:16: 1000000 INFO @ Tue, 02 Aug 2022 18:14:19: 6000000 INFO @ Tue, 02 Aug 2022 18:14:25: 2000000 INFO @ Tue, 02 Aug 2022 18:14:28: 7000000 INFO @ Tue, 02 Aug 2022 18:14:34: 3000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.7/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 02 Aug 2022 18:14:36: 8000000 INFO @ Tue, 02 Aug 2022 18:14:37: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX10855776/SRX10855776.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX10855776/SRX10855776.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX10855776/SRX10855776.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX10855776/SRX10855776.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 02 Aug 2022 18:14:37: #1 read tag files... INFO @ Tue, 02 Aug 2022 18:14:37: #1 read treatment tags... INFO @ Tue, 02 Aug 2022 18:14:43: 4000000 INFO @ Tue, 02 Aug 2022 18:14:44: 9000000 INFO @ Tue, 02 Aug 2022 18:14:46: 1000000 INFO @ Tue, 02 Aug 2022 18:14:52: 5000000 INFO @ Tue, 02 Aug 2022 18:14:53: 10000000 INFO @ Tue, 02 Aug 2022 18:14:55: 2000000 INFO @ Tue, 02 Aug 2022 18:15:02: 11000000 INFO @ Tue, 02 Aug 2022 18:15:02: 6000000 INFO @ Tue, 02 Aug 2022 18:15:04: 3000000 INFO @ Tue, 02 Aug 2022 18:15:10: 12000000 INFO @ Tue, 02 Aug 2022 18:15:11: 7000000 INFO @ Tue, 02 Aug 2022 18:15:13: 4000000 INFO @ Tue, 02 Aug 2022 18:15:19: 13000000 INFO @ Tue, 02 Aug 2022 18:15:21: 8000000 INFO @ Tue, 02 Aug 2022 18:15:23: 5000000 INFO @ Tue, 02 Aug 2022 18:15:27: 14000000 INFO @ Tue, 02 Aug 2022 18:15:31: 9000000 INFO @ Tue, 02 Aug 2022 18:15:32: 6000000 INFO @ Tue, 02 Aug 2022 18:15:36: 15000000 INFO @ Tue, 02 Aug 2022 18:15:40: 10000000 INFO @ Tue, 02 Aug 2022 18:15:41: 7000000 INFO @ Tue, 02 Aug 2022 18:15:45: 16000000 INFO @ Tue, 02 Aug 2022 18:15:50: 11000000 INFO @ Tue, 02 Aug 2022 18:15:51: 8000000 INFO @ Tue, 02 Aug 2022 18:15:53: 17000000 INFO @ Tue, 02 Aug 2022 18:16:00: 12000000 INFO @ Tue, 02 Aug 2022 18:16:00: 9000000 INFO @ Tue, 02 Aug 2022 18:16:02: 18000000 INFO @ Tue, 02 Aug 2022 18:16:10: 13000000 INFO @ Tue, 02 Aug 2022 18:16:10: 10000000 INFO @ Tue, 02 Aug 2022 18:16:11: 19000000 INFO @ Tue, 02 Aug 2022 18:16:19: 11000000 INFO @ Tue, 02 Aug 2022 18:16:19: 20000000 INFO @ Tue, 02 Aug 2022 18:16:19: 14000000 INFO @ Tue, 02 Aug 2022 18:16:28: 21000000 INFO @ Tue, 02 Aug 2022 18:16:28: 12000000 INFO @ Tue, 02 Aug 2022 18:16:29: 15000000 INFO @ Tue, 02 Aug 2022 18:16:36: 22000000 INFO @ Tue, 02 Aug 2022 18:16:37: 13000000 INFO @ Tue, 02 Aug 2022 18:16:38: 16000000 INFO @ Tue, 02 Aug 2022 18:16:44: 23000000 INFO @ Tue, 02 Aug 2022 18:16:46: 14000000 INFO @ Tue, 02 Aug 2022 18:16:48: 17000000 INFO @ Tue, 02 Aug 2022 18:16:53: 24000000 INFO @ Tue, 02 Aug 2022 18:16:55: 15000000 INFO @ Tue, 02 Aug 2022 18:16:57: 18000000 INFO @ Tue, 02 Aug 2022 18:17:01: 25000000 INFO @ Tue, 02 Aug 2022 18:17:04: 16000000 INFO @ Tue, 02 Aug 2022 18:17:06: 19000000 INFO @ Tue, 02 Aug 2022 18:17:09: 26000000 INFO @ Tue, 02 Aug 2022 18:17:13: 17000000 INFO @ Tue, 02 Aug 2022 18:17:15: 20000000 INFO @ Tue, 02 Aug 2022 18:17:18: 27000000 INFO @ Tue, 02 Aug 2022 18:17:22: 18000000 INFO @ Tue, 02 Aug 2022 18:17:24: 21000000 INFO @ Tue, 02 Aug 2022 18:17:26: 28000000 INFO @ Tue, 02 Aug 2022 18:17:31: 19000000 INFO @ Tue, 02 Aug 2022 18:17:33: 22000000 INFO @ Tue, 02 Aug 2022 18:17:35: 29000000 INFO @ Tue, 02 Aug 2022 18:17:40: 20000000 INFO @ Tue, 02 Aug 2022 18:17:42: 23000000 INFO @ Tue, 02 Aug 2022 18:17:43: 30000000 INFO @ Tue, 02 Aug 2022 18:17:49: 21000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 02 Aug 2022 18:17:51: 24000000 INFO @ Tue, 02 Aug 2022 18:17:52: 31000000 INFO @ Tue, 02 Aug 2022 18:17:58: 22000000 INFO @ Tue, 02 Aug 2022 18:18:00: 32000000 INFO @ Tue, 02 Aug 2022 18:18:00: 25000000 INFO @ Tue, 02 Aug 2022 18:18:07: 23000000 INFO @ Tue, 02 Aug 2022 18:18:09: 33000000 INFO @ Tue, 02 Aug 2022 18:18:10: 26000000 INFO @ Tue, 02 Aug 2022 18:18:16: 24000000 INFO @ Tue, 02 Aug 2022 18:18:18: 34000000 INFO @ Tue, 02 Aug 2022 18:18:19: 27000000 INFO @ Tue, 02 Aug 2022 18:18:24: 25000000 INFO @ Tue, 02 Aug 2022 18:18:27: 35000000 INFO @ Tue, 02 Aug 2022 18:18:28: 28000000 INFO @ Tue, 02 Aug 2022 18:18:33: 26000000 INFO @ Tue, 02 Aug 2022 18:18:35: 36000000 INFO @ Tue, 02 Aug 2022 18:18:37: 29000000 INFO @ Tue, 02 Aug 2022 18:18:42: 27000000 INFO @ Tue, 02 Aug 2022 18:18:44: 37000000 INFO @ Tue, 02 Aug 2022 18:18:46: 30000000 INFO @ Tue, 02 Aug 2022 18:18:51: 28000000 BigWig に変換しました。 INFO @ Tue, 02 Aug 2022 18:18:53: 38000000 INFO @ Tue, 02 Aug 2022 18:18:55: 31000000 INFO @ Tue, 02 Aug 2022 18:19:00: 29000000 INFO @ Tue, 02 Aug 2022 18:19:01: 39000000 INFO @ Tue, 02 Aug 2022 18:19:05: 32000000 INFO @ Tue, 02 Aug 2022 18:19:09: 30000000 INFO @ Tue, 02 Aug 2022 18:19:10: 40000000 INFO @ Tue, 02 Aug 2022 18:19:14: 33000000 INFO @ Tue, 02 Aug 2022 18:19:18: 31000000 INFO @ Tue, 02 Aug 2022 18:19:19: 41000000 INFO @ Tue, 02 Aug 2022 18:19:23: 34000000 INFO @ Tue, 02 Aug 2022 18:19:27: 32000000 INFO @ Tue, 02 Aug 2022 18:19:27: 42000000 INFO @ Tue, 02 Aug 2022 18:19:32: 35000000 INFO @ Tue, 02 Aug 2022 18:19:36: 43000000 INFO @ Tue, 02 Aug 2022 18:19:36: 33000000 INFO @ Tue, 02 Aug 2022 18:19:42: 36000000 INFO @ Tue, 02 Aug 2022 18:19:45: 44000000 INFO @ Tue, 02 Aug 2022 18:19:46: 34000000 INFO @ Tue, 02 Aug 2022 18:19:50: #1 tag size is determined as 100 bps INFO @ Tue, 02 Aug 2022 18:19:50: #1 tag size = 100 INFO @ Tue, 02 Aug 2022 18:19:50: #1 total tags in treatment: 21086216 INFO @ Tue, 02 Aug 2022 18:19:50: #1 user defined the maximum tags... INFO @ Tue, 02 Aug 2022 18:19:50: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 02 Aug 2022 18:19:51: #1 tags after filtering in treatment: 15656397 INFO @ Tue, 02 Aug 2022 18:19:51: #1 Redundant rate of treatment: 0.26 INFO @ Tue, 02 Aug 2022 18:19:51: #1 finished! INFO @ Tue, 02 Aug 2022 18:19:51: #2 Build Peak Model... INFO @ Tue, 02 Aug 2022 18:19:51: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 02 Aug 2022 18:19:51: 37000000 INFO @ Tue, 02 Aug 2022 18:19:52: #2 number of paired peaks: 565 WARNING @ Tue, 02 Aug 2022 18:19:52: Fewer paired peaks (565) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 565 pairs to build model! INFO @ Tue, 02 Aug 2022 18:19:52: start model_add_line... INFO @ Tue, 02 Aug 2022 18:19:52: start X-correlation... INFO @ Tue, 02 Aug 2022 18:19:52: end of X-cor INFO @ Tue, 02 Aug 2022 18:19:52: #2 finished! INFO @ Tue, 02 Aug 2022 18:19:52: #2 predicted fragment length is 171 bps INFO @ Tue, 02 Aug 2022 18:19:52: #2 alternative fragment length(s) may be 1,56,93,95,122,139,171 bps INFO @ Tue, 02 Aug 2022 18:19:52: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX10855776/SRX10855776.05_model.r WARNING @ Tue, 02 Aug 2022 18:19:52: #2 Since the d (171) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 02 Aug 2022 18:19:52: #2 You may need to consider one of the other alternative d(s): 1,56,93,95,122,139,171 WARNING @ Tue, 02 Aug 2022 18:19:52: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 02 Aug 2022 18:19:52: #3 Call peaks... INFO @ Tue, 02 Aug 2022 18:19:52: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 02 Aug 2022 18:19:55: 35000000 INFO @ Tue, 02 Aug 2022 18:19:59: 38000000 INFO @ Tue, 02 Aug 2022 18:20:03: 36000000 INFO @ Tue, 02 Aug 2022 18:20:08: 39000000 INFO @ Tue, 02 Aug 2022 18:20:12: 37000000 INFO @ Tue, 02 Aug 2022 18:20:17: 40000000 INFO @ Tue, 02 Aug 2022 18:20:20: 38000000 INFO @ Tue, 02 Aug 2022 18:20:22: #3 Call peaks for each chromosome... INFO @ Tue, 02 Aug 2022 18:20:26: 41000000 INFO @ Tue, 02 Aug 2022 18:20:29: 39000000 INFO @ Tue, 02 Aug 2022 18:20:35: 42000000 INFO @ Tue, 02 Aug 2022 18:20:37: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX10855776/SRX10855776.05_peaks.xls INFO @ Tue, 02 Aug 2022 18:20:37: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX10855776/SRX10855776.05_peaks.narrowPeak INFO @ Tue, 02 Aug 2022 18:20:37: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX10855776/SRX10855776.05_summits.bed INFO @ Tue, 02 Aug 2022 18:20:37: Done! pass1 - making usageList (13 chroms): 0 millis pass2 - checking and writing primary data (2421 records, 4 fields): 50 millis CompletedMACS2peakCalling INFO @ Tue, 02 Aug 2022 18:20:37: 40000000 INFO @ Tue, 02 Aug 2022 18:20:44: 43000000 INFO @ Tue, 02 Aug 2022 18:20:46: 41000000 INFO @ Tue, 02 Aug 2022 18:20:53: 44000000 INFO @ Tue, 02 Aug 2022 18:20:54: 42000000 INFO @ Tue, 02 Aug 2022 18:20:58: #1 tag size is determined as 100 bps INFO @ Tue, 02 Aug 2022 18:20:58: #1 tag size = 100 INFO @ Tue, 02 Aug 2022 18:20:58: #1 total tags in treatment: 21086216 INFO @ Tue, 02 Aug 2022 18:20:58: #1 user defined the maximum tags... INFO @ Tue, 02 Aug 2022 18:20:58: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 02 Aug 2022 18:20:59: #1 tags after filtering in treatment: 15656397 INFO @ Tue, 02 Aug 2022 18:20:59: #1 Redundant rate of treatment: 0.26 INFO @ Tue, 02 Aug 2022 18:20:59: #1 finished! INFO @ Tue, 02 Aug 2022 18:20:59: #2 Build Peak Model... INFO @ Tue, 02 Aug 2022 18:20:59: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 02 Aug 2022 18:21:00: #2 number of paired peaks: 565 WARNING @ Tue, 02 Aug 2022 18:21:00: Fewer paired peaks (565) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 565 pairs to build model! INFO @ Tue, 02 Aug 2022 18:21:00: start model_add_line... INFO @ Tue, 02 Aug 2022 18:21:00: start X-correlation... INFO @ Tue, 02 Aug 2022 18:21:00: end of X-cor INFO @ Tue, 02 Aug 2022 18:21:00: #2 finished! INFO @ Tue, 02 Aug 2022 18:21:00: #2 predicted fragment length is 171 bps INFO @ Tue, 02 Aug 2022 18:21:00: #2 alternative fragment length(s) may be 1,56,93,95,122,139,171 bps INFO @ Tue, 02 Aug 2022 18:21:00: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX10855776/SRX10855776.10_model.r WARNING @ Tue, 02 Aug 2022 18:21:00: #2 Since the d (171) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 02 Aug 2022 18:21:00: #2 You may need to consider one of the other alternative d(s): 1,56,93,95,122,139,171 WARNING @ Tue, 02 Aug 2022 18:21:00: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 02 Aug 2022 18:21:00: #3 Call peaks... INFO @ Tue, 02 Aug 2022 18:21:00: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 02 Aug 2022 18:21:03: 43000000 INFO @ Tue, 02 Aug 2022 18:21:11: 44000000 INFO @ Tue, 02 Aug 2022 18:21:16: #1 tag size is determined as 100 bps INFO @ Tue, 02 Aug 2022 18:21:16: #1 tag size = 100 INFO @ Tue, 02 Aug 2022 18:21:16: #1 total tags in treatment: 21086216 INFO @ Tue, 02 Aug 2022 18:21:16: #1 user defined the maximum tags... INFO @ Tue, 02 Aug 2022 18:21:16: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 02 Aug 2022 18:21:16: #1 tags after filtering in treatment: 15656397 INFO @ Tue, 02 Aug 2022 18:21:16: #1 Redundant rate of treatment: 0.26 INFO @ Tue, 02 Aug 2022 18:21:16: #1 finished! INFO @ Tue, 02 Aug 2022 18:21:16: #2 Build Peak Model... INFO @ Tue, 02 Aug 2022 18:21:16: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 02 Aug 2022 18:21:18: #2 number of paired peaks: 565 WARNING @ Tue, 02 Aug 2022 18:21:18: Fewer paired peaks (565) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 565 pairs to build model! INFO @ Tue, 02 Aug 2022 18:21:18: start model_add_line... INFO @ Tue, 02 Aug 2022 18:21:18: start X-correlation... INFO @ Tue, 02 Aug 2022 18:21:18: end of X-cor INFO @ Tue, 02 Aug 2022 18:21:18: #2 finished! INFO @ Tue, 02 Aug 2022 18:21:18: #2 predicted fragment length is 171 bps INFO @ Tue, 02 Aug 2022 18:21:18: #2 alternative fragment length(s) may be 1,56,93,95,122,139,171 bps INFO @ Tue, 02 Aug 2022 18:21:18: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX10855776/SRX10855776.20_model.r WARNING @ Tue, 02 Aug 2022 18:21:18: #2 Since the d (171) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 02 Aug 2022 18:21:18: #2 You may need to consider one of the other alternative d(s): 1,56,93,95,122,139,171 WARNING @ Tue, 02 Aug 2022 18:21:18: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 02 Aug 2022 18:21:18: #3 Call peaks... INFO @ Tue, 02 Aug 2022 18:21:18: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 02 Aug 2022 18:21:31: #3 Call peaks for each chromosome... INFO @ Tue, 02 Aug 2022 18:21:46: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX10855776/SRX10855776.10_peaks.xls INFO @ Tue, 02 Aug 2022 18:21:46: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX10855776/SRX10855776.10_peaks.narrowPeak INFO @ Tue, 02 Aug 2022 18:21:46: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX10855776/SRX10855776.10_summits.bed INFO @ Tue, 02 Aug 2022 18:21:46: Done! pass1 - making usageList (10 chroms): 1 millis pass2 - checking and writing primary data (943 records, 4 fields): 14 millis CompletedMACS2peakCalling INFO @ Tue, 02 Aug 2022 18:21:47: #3 Call peaks for each chromosome... INFO @ Tue, 02 Aug 2022 18:22:01: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX10855776/SRX10855776.20_peaks.xls INFO @ Tue, 02 Aug 2022 18:22:02: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX10855776/SRX10855776.20_peaks.narrowPeak INFO @ Tue, 02 Aug 2022 18:22:02: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX10855776/SRX10855776.20_summits.bed INFO @ Tue, 02 Aug 2022 18:22:02: Done! pass1 - making usageList (9 chroms): 0 millis pass2 - checking and writing primary data (306 records, 4 fields): 35 millis CompletedMACS2peakCalling