Job ID = 14172026 SRX = SRX10089739 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 41628722 spots for SRR13700626/SRR13700626.sra Written 41628722 spots for SRR13700626/SRR13700626.sra fastq に変換しました。 bowtie でマッピング中... Your job 14172542 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:01 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:23:43 41628722 reads; of these: 41628722 (100.00%) were paired; of these: 18026860 (43.30%) aligned concordantly 0 times 16411144 (39.42%) aligned concordantly exactly 1 time 7190718 (17.27%) aligned concordantly >1 times ---- 18026860 pairs aligned concordantly 0 times; of these: 61855 (0.34%) aligned discordantly 1 time ---- 17965005 pairs aligned 0 times concordantly or discordantly; of these: 35930010 mates make up the pairs; of these: 26147421 (72.77%) aligned 0 times 7745189 (21.56%) aligned exactly 1 time 2037400 (5.67%) aligned >1 times 68.59% overall alignment rate Time searching: 00:23:44 Overall time: 00:23:44 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 16 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 6163895 / 23231732 = 0.2653 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 11 Dec 2021 14:24:14: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX10089739/SRX10089739.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX10089739/SRX10089739.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX10089739/SRX10089739.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX10089739/SRX10089739.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 11 Dec 2021 14:24:14: #1 read tag files... INFO @ Sat, 11 Dec 2021 14:24:14: #1 read treatment tags... INFO @ Sat, 11 Dec 2021 14:24:19: 1000000 INFO @ Sat, 11 Dec 2021 14:24:25: 2000000 INFO @ Sat, 11 Dec 2021 14:24:31: 3000000 INFO @ Sat, 11 Dec 2021 14:24:36: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 11 Dec 2021 14:24:42: 5000000 INFO @ Sat, 11 Dec 2021 14:24:44: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX10089739/SRX10089739.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX10089739/SRX10089739.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX10089739/SRX10089739.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX10089739/SRX10089739.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 11 Dec 2021 14:24:44: #1 read tag files... INFO @ Sat, 11 Dec 2021 14:24:44: #1 read treatment tags... INFO @ Sat, 11 Dec 2021 14:24:48: 6000000 INFO @ Sat, 11 Dec 2021 14:24:49: 1000000 INFO @ Sat, 11 Dec 2021 14:24:54: 7000000 INFO @ Sat, 11 Dec 2021 14:24:55: 2000000 INFO @ Sat, 11 Dec 2021 14:25:00: 8000000 INFO @ Sat, 11 Dec 2021 14:25:00: 3000000 INFO @ Sat, 11 Dec 2021 14:25:06: 4000000 INFO @ Sat, 11 Dec 2021 14:25:06: 9000000 INFO @ Sat, 11 Dec 2021 14:25:11: 5000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 11 Dec 2021 14:25:12: 10000000 INFO @ Sat, 11 Dec 2021 14:25:14: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX10089739/SRX10089739.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX10089739/SRX10089739.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX10089739/SRX10089739.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX10089739/SRX10089739.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 11 Dec 2021 14:25:14: #1 read tag files... INFO @ Sat, 11 Dec 2021 14:25:14: #1 read treatment tags... INFO @ Sat, 11 Dec 2021 14:25:17: 6000000 INFO @ Sat, 11 Dec 2021 14:25:18: 11000000 INFO @ Sat, 11 Dec 2021 14:25:19: 1000000 INFO @ Sat, 11 Dec 2021 14:25:23: 7000000 INFO @ Sat, 11 Dec 2021 14:25:24: 12000000 INFO @ Sat, 11 Dec 2021 14:25:25: 2000000 INFO @ Sat, 11 Dec 2021 14:25:28: 8000000 INFO @ Sat, 11 Dec 2021 14:25:30: 13000000 INFO @ Sat, 11 Dec 2021 14:25:30: 3000000 INFO @ Sat, 11 Dec 2021 14:25:34: 9000000 INFO @ Sat, 11 Dec 2021 14:25:36: 4000000 INFO @ Sat, 11 Dec 2021 14:25:36: 14000000 INFO @ Sat, 11 Dec 2021 14:25:39: 10000000 INFO @ Sat, 11 Dec 2021 14:25:42: 5000000 INFO @ Sat, 11 Dec 2021 14:25:42: 15000000 INFO @ Sat, 11 Dec 2021 14:25:45: 11000000 INFO @ Sat, 11 Dec 2021 14:25:47: 6000000 INFO @ Sat, 11 Dec 2021 14:25:48: 16000000 INFO @ Sat, 11 Dec 2021 14:25:51: 12000000 INFO @ Sat, 11 Dec 2021 14:25:53: 7000000 INFO @ Sat, 11 Dec 2021 14:25:54: 17000000 INFO @ Sat, 11 Dec 2021 14:25:56: 13000000 INFO @ Sat, 11 Dec 2021 14:25:59: 8000000 INFO @ Sat, 11 Dec 2021 14:26:00: 18000000 INFO @ Sat, 11 Dec 2021 14:26:02: 14000000 INFO @ Sat, 11 Dec 2021 14:26:04: 9000000 INFO @ Sat, 11 Dec 2021 14:26:06: 19000000 INFO @ Sat, 11 Dec 2021 14:26:08: 15000000 INFO @ Sat, 11 Dec 2021 14:26:10: 10000000 INFO @ Sat, 11 Dec 2021 14:26:12: 20000000 INFO @ Sat, 11 Dec 2021 14:26:13: 16000000 INFO @ Sat, 11 Dec 2021 14:26:15: 11000000 INFO @ Sat, 11 Dec 2021 14:26:19: 21000000 INFO @ Sat, 11 Dec 2021 14:26:19: 17000000 INFO @ Sat, 11 Dec 2021 14:26:21: 12000000 INFO @ Sat, 11 Dec 2021 14:26:24: 18000000 INFO @ Sat, 11 Dec 2021 14:26:25: 22000000 INFO @ Sat, 11 Dec 2021 14:26:27: 13000000 INFO @ Sat, 11 Dec 2021 14:26:30: 19000000 INFO @ Sat, 11 Dec 2021 14:26:31: 23000000 INFO @ Sat, 11 Dec 2021 14:26:32: 14000000 INFO @ Sat, 11 Dec 2021 14:26:36: 20000000 INFO @ Sat, 11 Dec 2021 14:26:37: 24000000 INFO @ Sat, 11 Dec 2021 14:26:38: 15000000 INFO @ Sat, 11 Dec 2021 14:26:41: 21000000 INFO @ Sat, 11 Dec 2021 14:26:43: 25000000 INFO @ Sat, 11 Dec 2021 14:26:43: 16000000 INFO @ Sat, 11 Dec 2021 14:26:47: 22000000 INFO @ Sat, 11 Dec 2021 14:26:49: 17000000 INFO @ Sat, 11 Dec 2021 14:26:49: 26000000 INFO @ Sat, 11 Dec 2021 14:26:52: 23000000 INFO @ Sat, 11 Dec 2021 14:26:54: 18000000 INFO @ Sat, 11 Dec 2021 14:26:55: 27000000 INFO @ Sat, 11 Dec 2021 14:26:58: 24000000 INFO @ Sat, 11 Dec 2021 14:27:00: 19000000 INFO @ Sat, 11 Dec 2021 14:27:02: 28000000 INFO @ Sat, 11 Dec 2021 14:27:03: 25000000 INFO @ Sat, 11 Dec 2021 14:27:05: 20000000 INFO @ Sat, 11 Dec 2021 14:27:08: 29000000 INFO @ Sat, 11 Dec 2021 14:27:09: 26000000 INFO @ Sat, 11 Dec 2021 14:27:11: 21000000 INFO @ Sat, 11 Dec 2021 14:27:14: 30000000 INFO @ Sat, 11 Dec 2021 14:27:15: 27000000 INFO @ Sat, 11 Dec 2021 14:27:16: 22000000 INFO @ Sat, 11 Dec 2021 14:27:20: 28000000 INFO @ Sat, 11 Dec 2021 14:27:20: 31000000 INFO @ Sat, 11 Dec 2021 14:27:22: 23000000 INFO @ Sat, 11 Dec 2021 14:27:26: 29000000 INFO @ Sat, 11 Dec 2021 14:27:26: 32000000 INFO @ Sat, 11 Dec 2021 14:27:28: 24000000 INFO @ Sat, 11 Dec 2021 14:27:31: 30000000 INFO @ Sat, 11 Dec 2021 14:27:33: 33000000 INFO @ Sat, 11 Dec 2021 14:27:33: 25000000 INFO @ Sat, 11 Dec 2021 14:27:37: 31000000 INFO @ Sat, 11 Dec 2021 14:27:39: 26000000 INFO @ Sat, 11 Dec 2021 14:27:39: 34000000 INFO @ Sat, 11 Dec 2021 14:27:42: 32000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sat, 11 Dec 2021 14:27:44: 27000000 INFO @ Sat, 11 Dec 2021 14:27:45: 35000000 INFO @ Sat, 11 Dec 2021 14:27:48: 33000000 INFO @ Sat, 11 Dec 2021 14:27:50: 28000000 INFO @ Sat, 11 Dec 2021 14:27:51: 36000000 INFO @ Sat, 11 Dec 2021 14:27:53: 34000000 INFO @ Sat, 11 Dec 2021 14:27:55: 29000000 INFO @ Sat, 11 Dec 2021 14:27:57: 37000000 INFO @ Sat, 11 Dec 2021 14:27:59: 35000000 INFO @ Sat, 11 Dec 2021 14:28:01: 30000000 INFO @ Sat, 11 Dec 2021 14:28:03: 38000000 INFO @ Sat, 11 Dec 2021 14:28:04: 36000000 INFO @ Sat, 11 Dec 2021 14:28:06: 31000000 INFO @ Sat, 11 Dec 2021 14:28:09: 39000000 INFO @ Sat, 11 Dec 2021 14:28:10: 37000000 INFO @ Sat, 11 Dec 2021 14:28:12: 32000000 INFO @ Sat, 11 Dec 2021 14:28:15: 38000000 INFO @ Sat, 11 Dec 2021 14:28:16: 40000000 INFO @ Sat, 11 Dec 2021 14:28:17: 33000000 INFO @ Sat, 11 Dec 2021 14:28:21: 39000000 INFO @ Sat, 11 Dec 2021 14:28:22: 41000000 INFO @ Sat, 11 Dec 2021 14:28:22: 34000000 INFO @ Sat, 11 Dec 2021 14:28:27: 40000000 INFO @ Sat, 11 Dec 2021 14:28:28: 35000000 INFO @ Sat, 11 Dec 2021 14:28:28: 42000000 INFO @ Sat, 11 Dec 2021 14:28:32: 41000000 INFO @ Sat, 11 Dec 2021 14:28:33: 36000000 INFO @ Sat, 11 Dec 2021 14:28:34: 43000000 BigWig に変換しました。 INFO @ Sat, 11 Dec 2021 14:28:38: 42000000 INFO @ Sat, 11 Dec 2021 14:28:39: 37000000 INFO @ Sat, 11 Dec 2021 14:28:40: 44000000 INFO @ Sat, 11 Dec 2021 14:28:43: 43000000 INFO @ Sat, 11 Dec 2021 14:28:44: 38000000 INFO @ Sat, 11 Dec 2021 14:28:45: #1 tag size is determined as 36 bps INFO @ Sat, 11 Dec 2021 14:28:45: #1 tag size = 36 INFO @ Sat, 11 Dec 2021 14:28:45: #1 total tags in treatment: 17439527 INFO @ Sat, 11 Dec 2021 14:28:45: #1 user defined the maximum tags... INFO @ Sat, 11 Dec 2021 14:28:45: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 11 Dec 2021 14:28:46: #1 tags after filtering in treatment: 11971994 INFO @ Sat, 11 Dec 2021 14:28:46: #1 Redundant rate of treatment: 0.31 INFO @ Sat, 11 Dec 2021 14:28:46: #1 finished! INFO @ Sat, 11 Dec 2021 14:28:46: #2 Build Peak Model... INFO @ Sat, 11 Dec 2021 14:28:46: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 11 Dec 2021 14:28:47: #2 number of paired peaks: 1392 INFO @ Sat, 11 Dec 2021 14:28:47: start model_add_line... INFO @ Sat, 11 Dec 2021 14:28:47: start X-correlation... INFO @ Sat, 11 Dec 2021 14:28:47: end of X-cor INFO @ Sat, 11 Dec 2021 14:28:47: #2 finished! INFO @ Sat, 11 Dec 2021 14:28:47: #2 predicted fragment length is 67 bps INFO @ Sat, 11 Dec 2021 14:28:47: #2 alternative fragment length(s) may be 67 bps INFO @ Sat, 11 Dec 2021 14:28:47: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX10089739/SRX10089739.05_model.r WARNING @ Sat, 11 Dec 2021 14:28:47: #2 Since the d (67) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 11 Dec 2021 14:28:47: #2 You may need to consider one of the other alternative d(s): 67 WARNING @ Sat, 11 Dec 2021 14:28:47: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 11 Dec 2021 14:28:47: #3 Call peaks... INFO @ Sat, 11 Dec 2021 14:28:47: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 11 Dec 2021 14:28:49: 44000000 INFO @ Sat, 11 Dec 2021 14:28:50: 39000000 INFO @ Sat, 11 Dec 2021 14:28:53: #1 tag size is determined as 36 bps INFO @ Sat, 11 Dec 2021 14:28:53: #1 tag size = 36 INFO @ Sat, 11 Dec 2021 14:28:53: #1 total tags in treatment: 17439527 INFO @ Sat, 11 Dec 2021 14:28:53: #1 user defined the maximum tags... INFO @ Sat, 11 Dec 2021 14:28:53: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 11 Dec 2021 14:28:53: #1 tags after filtering in treatment: 11971994 INFO @ Sat, 11 Dec 2021 14:28:53: #1 Redundant rate of treatment: 0.31 INFO @ Sat, 11 Dec 2021 14:28:53: #1 finished! INFO @ Sat, 11 Dec 2021 14:28:53: #2 Build Peak Model... INFO @ Sat, 11 Dec 2021 14:28:53: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 11 Dec 2021 14:28:54: #2 number of paired peaks: 1392 INFO @ Sat, 11 Dec 2021 14:28:54: start model_add_line... INFO @ Sat, 11 Dec 2021 14:28:54: start X-correlation... INFO @ Sat, 11 Dec 2021 14:28:54: end of X-cor INFO @ Sat, 11 Dec 2021 14:28:54: #2 finished! INFO @ Sat, 11 Dec 2021 14:28:54: #2 predicted fragment length is 67 bps INFO @ Sat, 11 Dec 2021 14:28:54: #2 alternative fragment length(s) may be 67 bps INFO @ Sat, 11 Dec 2021 14:28:54: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX10089739/SRX10089739.10_model.r WARNING @ Sat, 11 Dec 2021 14:28:54: #2 Since the d (67) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 11 Dec 2021 14:28:54: #2 You may need to consider one of the other alternative d(s): 67 WARNING @ Sat, 11 Dec 2021 14:28:54: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 11 Dec 2021 14:28:54: #3 Call peaks... INFO @ Sat, 11 Dec 2021 14:28:54: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 11 Dec 2021 14:28:55: 40000000 INFO @ Sat, 11 Dec 2021 14:29:00: 41000000 INFO @ Sat, 11 Dec 2021 14:29:05: 42000000 INFO @ Sat, 11 Dec 2021 14:29:10: 43000000 INFO @ Sat, 11 Dec 2021 14:29:10: #3 Call peaks for each chromosome... INFO @ Sat, 11 Dec 2021 14:29:15: 44000000 INFO @ Sat, 11 Dec 2021 14:29:17: #3 Call peaks for each chromosome... INFO @ Sat, 11 Dec 2021 14:29:19: #1 tag size is determined as 36 bps INFO @ Sat, 11 Dec 2021 14:29:19: #1 tag size = 36 INFO @ Sat, 11 Dec 2021 14:29:19: #1 total tags in treatment: 17439527 INFO @ Sat, 11 Dec 2021 14:29:19: #1 user defined the maximum tags... INFO @ Sat, 11 Dec 2021 14:29:19: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 11 Dec 2021 14:29:19: #1 tags after filtering in treatment: 11971994 INFO @ Sat, 11 Dec 2021 14:29:19: #1 Redundant rate of treatment: 0.31 INFO @ Sat, 11 Dec 2021 14:29:19: #1 finished! INFO @ Sat, 11 Dec 2021 14:29:19: #2 Build Peak Model... INFO @ Sat, 11 Dec 2021 14:29:19: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 11 Dec 2021 14:29:20: #2 number of paired peaks: 1392 INFO @ Sat, 11 Dec 2021 14:29:20: start model_add_line... INFO @ Sat, 11 Dec 2021 14:29:20: start X-correlation... INFO @ Sat, 11 Dec 2021 14:29:20: end of X-cor INFO @ Sat, 11 Dec 2021 14:29:20: #2 finished! INFO @ Sat, 11 Dec 2021 14:29:20: #2 predicted fragment length is 67 bps INFO @ Sat, 11 Dec 2021 14:29:20: #2 alternative fragment length(s) may be 67 bps INFO @ Sat, 11 Dec 2021 14:29:20: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX10089739/SRX10089739.20_model.r WARNING @ Sat, 11 Dec 2021 14:29:20: #2 Since the d (67) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 11 Dec 2021 14:29:20: #2 You may need to consider one of the other alternative d(s): 67 WARNING @ Sat, 11 Dec 2021 14:29:20: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 11 Dec 2021 14:29:20: #3 Call peaks... INFO @ Sat, 11 Dec 2021 14:29:20: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 11 Dec 2021 14:29:22: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX10089739/SRX10089739.05_peaks.xls INFO @ Sat, 11 Dec 2021 14:29:22: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX10089739/SRX10089739.05_peaks.narrowPeak INFO @ Sat, 11 Dec 2021 14:29:23: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX10089739/SRX10089739.05_summits.bed INFO @ Sat, 11 Dec 2021 14:29:23: Done! pass1 - making usageList (15 chroms): 3 millis pass2 - checking and writing primary data (18736 records, 4 fields): 18 millis CompletedMACS2peakCalling INFO @ Sat, 11 Dec 2021 14:29:29: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX10089739/SRX10089739.10_peaks.xls INFO @ Sat, 11 Dec 2021 14:29:29: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX10089739/SRX10089739.10_peaks.narrowPeak INFO @ Sat, 11 Dec 2021 14:29:29: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX10089739/SRX10089739.10_summits.bed INFO @ Sat, 11 Dec 2021 14:29:29: Done! pass1 - making usageList (15 chroms): 1 millis pass2 - checking and writing primary data (9721 records, 4 fields): 10 millis CompletedMACS2peakCalling INFO @ Sat, 11 Dec 2021 14:29:43: #3 Call peaks for each chromosome... INFO @ Sat, 11 Dec 2021 14:29:55: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX10089739/SRX10089739.20_peaks.xls INFO @ Sat, 11 Dec 2021 14:29:55: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX10089739/SRX10089739.20_peaks.narrowPeak INFO @ Sat, 11 Dec 2021 14:29:55: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX10089739/SRX10089739.20_summits.bed INFO @ Sat, 11 Dec 2021 14:29:55: Done! pass1 - making usageList (13 chroms): 1 millis pass2 - checking and writing primary data (2377 records, 4 fields): 4 millis CompletedMACS2peakCalling