Job ID = 16437577 SRX = ERX5847875 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2022-08-02T03:46:06 prefetch.2.10.7: 1) Downloading 'ERR6212885'... 2022-08-02T03:46:06 prefetch.2.10.7: Downloading via HTTPS... 2022-08-02T03:47:31 prefetch.2.10.7: HTTPS download succeed 2022-08-02T03:47:31 prefetch.2.10.7: 1) 'ERR6212885' was downloaded successfully 2022-08-02T03:47:31 prefetch.2.10.7: 'ERR6212885' has 0 unresolved dependencies Read 34071532 spots for ERR6212885/ERR6212885.sra Written 34071532 spots for ERR6212885/ERR6212885.sra fastq に変換しました。 bowtie でマッピング中... Your job 16438036 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:01 Multiseed full-index search: 00:23:12 34071532 reads; of these: 34071532 (100.00%) were paired; of these: 3414076 (10.02%) aligned concordantly 0 times 29449635 (86.43%) aligned concordantly exactly 1 time 1207821 (3.54%) aligned concordantly >1 times ---- 3414076 pairs aligned concordantly 0 times; of these: 439313 (12.87%) aligned discordantly 1 time ---- 2974763 pairs aligned 0 times concordantly or discordantly; of these: 5949526 mates make up the pairs; of these: 3935251 (66.14%) aligned 0 times 1833971 (30.83%) aligned exactly 1 time 180304 (3.03%) aligned >1 times 94.23% overall alignment rate Time searching: 00:23:13 Overall time: 00:23:13 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 28 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 4649410 / 31086452 = 0.1496 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.7/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 02 Aug 2022 13:26:37: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/ERX5847875/ERX5847875.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/ERX5847875/ERX5847875.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/ERX5847875/ERX5847875.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/ERX5847875/ERX5847875.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 02 Aug 2022 13:26:37: #1 read tag files... INFO @ Tue, 02 Aug 2022 13:26:37: #1 read treatment tags... INFO @ Tue, 02 Aug 2022 13:26:42: 1000000 INFO @ Tue, 02 Aug 2022 13:26:48: 2000000 INFO @ Tue, 02 Aug 2022 13:26:53: 3000000 INFO @ Tue, 02 Aug 2022 13:26:59: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.7/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 02 Aug 2022 13:27:04: 5000000 INFO @ Tue, 02 Aug 2022 13:27:06: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/ERX5847875/ERX5847875.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/ERX5847875/ERX5847875.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/ERX5847875/ERX5847875.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/ERX5847875/ERX5847875.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 02 Aug 2022 13:27:06: #1 read tag files... INFO @ Tue, 02 Aug 2022 13:27:06: #1 read treatment tags... INFO @ Tue, 02 Aug 2022 13:27:10: 6000000 INFO @ Tue, 02 Aug 2022 13:27:12: 1000000 INFO @ Tue, 02 Aug 2022 13:27:16: 7000000 INFO @ Tue, 02 Aug 2022 13:27:17: 2000000 INFO @ Tue, 02 Aug 2022 13:27:22: 3000000 INFO @ Tue, 02 Aug 2022 13:27:22: 8000000 INFO @ Tue, 02 Aug 2022 13:27:27: 4000000 INFO @ Tue, 02 Aug 2022 13:27:28: 9000000 INFO @ Tue, 02 Aug 2022 13:27:31: 5000000 INFO @ Tue, 02 Aug 2022 13:27:34: 10000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.7/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 02 Aug 2022 13:27:36: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/ERX5847875/ERX5847875.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/ERX5847875/ERX5847875.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/ERX5847875/ERX5847875.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/ERX5847875/ERX5847875.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 02 Aug 2022 13:27:36: #1 read tag files... INFO @ Tue, 02 Aug 2022 13:27:36: #1 read treatment tags... INFO @ Tue, 02 Aug 2022 13:27:36: 6000000 INFO @ Tue, 02 Aug 2022 13:27:40: 11000000 INFO @ Tue, 02 Aug 2022 13:27:41: 7000000 INFO @ Tue, 02 Aug 2022 13:27:42: 1000000 INFO @ Tue, 02 Aug 2022 13:27:45: 12000000 INFO @ Tue, 02 Aug 2022 13:27:47: 8000000 INFO @ Tue, 02 Aug 2022 13:27:48: 2000000 INFO @ Tue, 02 Aug 2022 13:27:51: 13000000 INFO @ Tue, 02 Aug 2022 13:27:52: 9000000 INFO @ Tue, 02 Aug 2022 13:27:54: 3000000 INFO @ Tue, 02 Aug 2022 13:27:57: 10000000 INFO @ Tue, 02 Aug 2022 13:27:57: 14000000 INFO @ Tue, 02 Aug 2022 13:27:59: 4000000 INFO @ Tue, 02 Aug 2022 13:28:02: 11000000 INFO @ Tue, 02 Aug 2022 13:28:03: 15000000 INFO @ Tue, 02 Aug 2022 13:28:05: 5000000 INFO @ Tue, 02 Aug 2022 13:28:07: 12000000 INFO @ Tue, 02 Aug 2022 13:28:08: 16000000 INFO @ Tue, 02 Aug 2022 13:28:10: 6000000 INFO @ Tue, 02 Aug 2022 13:28:12: 13000000 INFO @ Tue, 02 Aug 2022 13:28:13: 17000000 INFO @ Tue, 02 Aug 2022 13:28:15: 7000000 INFO @ Tue, 02 Aug 2022 13:28:17: 14000000 INFO @ Tue, 02 Aug 2022 13:28:18: 18000000 INFO @ Tue, 02 Aug 2022 13:28:21: 8000000 INFO @ Tue, 02 Aug 2022 13:28:22: 15000000 INFO @ Tue, 02 Aug 2022 13:28:23: 19000000 INFO @ Tue, 02 Aug 2022 13:28:26: 9000000 INFO @ Tue, 02 Aug 2022 13:28:27: 16000000 INFO @ Tue, 02 Aug 2022 13:28:28: 20000000 INFO @ Tue, 02 Aug 2022 13:28:31: 10000000 INFO @ Tue, 02 Aug 2022 13:28:32: 17000000 INFO @ Tue, 02 Aug 2022 13:28:33: 21000000 INFO @ Tue, 02 Aug 2022 13:28:36: 11000000 INFO @ Tue, 02 Aug 2022 13:28:37: 18000000 INFO @ Tue, 02 Aug 2022 13:28:38: 22000000 INFO @ Tue, 02 Aug 2022 13:28:41: 12000000 INFO @ Tue, 02 Aug 2022 13:28:42: 19000000 INFO @ Tue, 02 Aug 2022 13:28:43: 23000000 INFO @ Tue, 02 Aug 2022 13:28:46: 13000000 INFO @ Tue, 02 Aug 2022 13:28:47: 20000000 INFO @ Tue, 02 Aug 2022 13:28:48: 24000000 INFO @ Tue, 02 Aug 2022 13:28:52: 14000000 INFO @ Tue, 02 Aug 2022 13:28:52: 21000000 INFO @ Tue, 02 Aug 2022 13:28:53: 25000000 INFO @ Tue, 02 Aug 2022 13:28:57: 15000000 INFO @ Tue, 02 Aug 2022 13:28:57: 22000000 INFO @ Tue, 02 Aug 2022 13:28:58: 26000000 INFO @ Tue, 02 Aug 2022 13:29:02: 16000000 INFO @ Tue, 02 Aug 2022 13:29:02: 23000000 INFO @ Tue, 02 Aug 2022 13:29:03: 27000000 INFO @ Tue, 02 Aug 2022 13:29:07: 24000000 INFO @ Tue, 02 Aug 2022 13:29:07: 17000000 INFO @ Tue, 02 Aug 2022 13:29:08: 28000000 INFO @ Tue, 02 Aug 2022 13:29:12: 18000000 INFO @ Tue, 02 Aug 2022 13:29:12: 25000000 INFO @ Tue, 02 Aug 2022 13:29:13: 29000000 INFO @ Tue, 02 Aug 2022 13:29:17: 19000000 INFO @ Tue, 02 Aug 2022 13:29:17: 26000000 INFO @ Tue, 02 Aug 2022 13:29:18: 30000000 INFO @ Tue, 02 Aug 2022 13:29:22: 20000000 INFO @ Tue, 02 Aug 2022 13:29:22: 27000000 INFO @ Tue, 02 Aug 2022 13:29:23: 31000000 INFO @ Tue, 02 Aug 2022 13:29:27: 28000000 INFO @ Tue, 02 Aug 2022 13:29:27: 21000000 INFO @ Tue, 02 Aug 2022 13:29:28: 32000000 INFO @ Tue, 02 Aug 2022 13:29:32: 29000000 INFO @ Tue, 02 Aug 2022 13:29:32: 22000000 INFO @ Tue, 02 Aug 2022 13:29:33: 33000000 INFO @ Tue, 02 Aug 2022 13:29:37: 30000000 INFO @ Tue, 02 Aug 2022 13:29:37: 23000000 INFO @ Tue, 02 Aug 2022 13:29:38: 34000000 INFO @ Tue, 02 Aug 2022 13:29:42: 31000000 INFO @ Tue, 02 Aug 2022 13:29:42: 24000000 INFO @ Tue, 02 Aug 2022 13:29:43: 35000000 INFO @ Tue, 02 Aug 2022 13:29:47: 32000000 INFO @ Tue, 02 Aug 2022 13:29:47: 25000000 INFO @ Tue, 02 Aug 2022 13:29:48: 36000000 INFO @ Tue, 02 Aug 2022 13:29:52: 33000000 INFO @ Tue, 02 Aug 2022 13:29:52: 26000000 INFO @ Tue, 02 Aug 2022 13:29:53: 37000000 INFO @ Tue, 02 Aug 2022 13:29:57: 34000000 INFO @ Tue, 02 Aug 2022 13:29:57: 27000000 INFO @ Tue, 02 Aug 2022 13:29:58: 38000000 INFO @ Tue, 02 Aug 2022 13:30:02: 35000000 INFO @ Tue, 02 Aug 2022 13:30:02: 28000000 INFO @ Tue, 02 Aug 2022 13:30:03: 39000000 INFO @ Tue, 02 Aug 2022 13:30:07: 36000000 INFO @ Tue, 02 Aug 2022 13:30:07: 29000000 INFO @ Tue, 02 Aug 2022 13:30:07: 40000000 INFO @ Tue, 02 Aug 2022 13:30:12: 37000000 INFO @ Tue, 02 Aug 2022 13:30:12: 41000000 INFO @ Tue, 02 Aug 2022 13:30:12: 30000000 INFO @ Tue, 02 Aug 2022 13:30:17: 38000000 INFO @ Tue, 02 Aug 2022 13:30:17: 42000000 INFO @ Tue, 02 Aug 2022 13:30:18: 31000000 INFO @ Tue, 02 Aug 2022 13:30:22: 39000000 INFO @ Tue, 02 Aug 2022 13:30:22: 43000000 INFO @ Tue, 02 Aug 2022 13:30:23: 32000000 INFO @ Tue, 02 Aug 2022 13:30:27: 40000000 INFO @ Tue, 02 Aug 2022 13:30:27: 44000000 INFO @ Tue, 02 Aug 2022 13:30:28: 33000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 02 Aug 2022 13:30:32: 41000000 INFO @ Tue, 02 Aug 2022 13:30:32: 45000000 INFO @ Tue, 02 Aug 2022 13:30:33: 34000000 INFO @ Tue, 02 Aug 2022 13:30:37: 42000000 INFO @ Tue, 02 Aug 2022 13:30:37: 46000000 INFO @ Tue, 02 Aug 2022 13:30:37: 35000000 INFO @ Tue, 02 Aug 2022 13:30:42: 43000000 INFO @ Tue, 02 Aug 2022 13:30:42: 47000000 INFO @ Tue, 02 Aug 2022 13:30:42: 36000000 INFO @ Tue, 02 Aug 2022 13:30:47: 44000000 INFO @ Tue, 02 Aug 2022 13:30:47: 48000000 INFO @ Tue, 02 Aug 2022 13:30:47: 37000000 INFO @ Tue, 02 Aug 2022 13:30:52: 45000000 INFO @ Tue, 02 Aug 2022 13:30:52: 38000000 INFO @ Tue, 02 Aug 2022 13:30:52: 49000000 INFO @ Tue, 02 Aug 2022 13:30:57: 39000000 INFO @ Tue, 02 Aug 2022 13:30:57: 46000000 INFO @ Tue, 02 Aug 2022 13:30:57: 50000000 INFO @ Tue, 02 Aug 2022 13:31:02: 40000000 INFO @ Tue, 02 Aug 2022 13:31:02: 47000000 INFO @ Tue, 02 Aug 2022 13:31:02: 51000000 INFO @ Tue, 02 Aug 2022 13:31:07: 41000000 INFO @ Tue, 02 Aug 2022 13:31:07: 48000000 INFO @ Tue, 02 Aug 2022 13:31:07: 52000000 INFO @ Tue, 02 Aug 2022 13:31:11: 42000000 INFO @ Tue, 02 Aug 2022 13:31:11: 49000000 INFO @ Tue, 02 Aug 2022 13:31:12: 53000000 INFO @ Tue, 02 Aug 2022 13:31:16: 43000000 INFO @ Tue, 02 Aug 2022 13:31:16: 50000000 INFO @ Tue, 02 Aug 2022 13:31:17: 54000000 BigWig に変換しました。 INFO @ Tue, 02 Aug 2022 13:31:21: 44000000 INFO @ Tue, 02 Aug 2022 13:31:21: 51000000 INFO @ Tue, 02 Aug 2022 13:31:21: #1 tag size is determined as 51 bps INFO @ Tue, 02 Aug 2022 13:31:21: #1 tag size = 51 INFO @ Tue, 02 Aug 2022 13:31:21: #1 total tags in treatment: 26024138 INFO @ Tue, 02 Aug 2022 13:31:21: #1 user defined the maximum tags... INFO @ Tue, 02 Aug 2022 13:31:21: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 02 Aug 2022 13:31:22: #1 tags after filtering in treatment: 16505514 INFO @ Tue, 02 Aug 2022 13:31:22: #1 Redundant rate of treatment: 0.37 INFO @ Tue, 02 Aug 2022 13:31:22: #1 finished! INFO @ Tue, 02 Aug 2022 13:31:22: #2 Build Peak Model... INFO @ Tue, 02 Aug 2022 13:31:22: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 02 Aug 2022 13:31:24: #2 number of paired peaks: 11837 INFO @ Tue, 02 Aug 2022 13:31:24: start model_add_line... INFO @ Tue, 02 Aug 2022 13:31:24: start X-correlation... INFO @ Tue, 02 Aug 2022 13:31:24: end of X-cor INFO @ Tue, 02 Aug 2022 13:31:24: #2 finished! INFO @ Tue, 02 Aug 2022 13:31:24: #2 predicted fragment length is 203 bps INFO @ Tue, 02 Aug 2022 13:31:24: #2 alternative fragment length(s) may be 203 bps INFO @ Tue, 02 Aug 2022 13:31:24: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/ERX5847875/ERX5847875.05_model.r INFO @ Tue, 02 Aug 2022 13:31:24: #3 Call peaks... INFO @ Tue, 02 Aug 2022 13:31:24: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 02 Aug 2022 13:31:26: 45000000 INFO @ Tue, 02 Aug 2022 13:31:26: 52000000 INFO @ Tue, 02 Aug 2022 13:31:31: 46000000 INFO @ Tue, 02 Aug 2022 13:31:31: 53000000 INFO @ Tue, 02 Aug 2022 13:31:35: 47000000 INFO @ Tue, 02 Aug 2022 13:31:36: 54000000 INFO @ Tue, 02 Aug 2022 13:31:40: 48000000 INFO @ Tue, 02 Aug 2022 13:31:41: #1 tag size is determined as 51 bps INFO @ Tue, 02 Aug 2022 13:31:41: #1 tag size = 51 INFO @ Tue, 02 Aug 2022 13:31:41: #1 total tags in treatment: 26024138 INFO @ Tue, 02 Aug 2022 13:31:41: #1 user defined the maximum tags... INFO @ Tue, 02 Aug 2022 13:31:41: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 02 Aug 2022 13:31:41: #1 tags after filtering in treatment: 16505514 INFO @ Tue, 02 Aug 2022 13:31:41: #1 Redundant rate of treatment: 0.37 INFO @ Tue, 02 Aug 2022 13:31:41: #1 finished! INFO @ Tue, 02 Aug 2022 13:31:41: #2 Build Peak Model... INFO @ Tue, 02 Aug 2022 13:31:41: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 02 Aug 2022 13:31:43: #2 number of paired peaks: 11837 INFO @ Tue, 02 Aug 2022 13:31:43: start model_add_line... INFO @ Tue, 02 Aug 2022 13:31:43: start X-correlation... INFO @ Tue, 02 Aug 2022 13:31:43: end of X-cor INFO @ Tue, 02 Aug 2022 13:31:43: #2 finished! INFO @ Tue, 02 Aug 2022 13:31:43: #2 predicted fragment length is 203 bps INFO @ Tue, 02 Aug 2022 13:31:43: #2 alternative fragment length(s) may be 203 bps INFO @ Tue, 02 Aug 2022 13:31:43: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/ERX5847875/ERX5847875.10_model.r INFO @ Tue, 02 Aug 2022 13:31:44: #3 Call peaks... INFO @ Tue, 02 Aug 2022 13:31:44: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 02 Aug 2022 13:31:45: 49000000 INFO @ Tue, 02 Aug 2022 13:31:49: 50000000 INFO @ Tue, 02 Aug 2022 13:31:54: 51000000 INFO @ Tue, 02 Aug 2022 13:31:59: 52000000 INFO @ Tue, 02 Aug 2022 13:32:03: 53000000 INFO @ Tue, 02 Aug 2022 13:32:08: 54000000 INFO @ Tue, 02 Aug 2022 13:32:12: #1 tag size is determined as 51 bps INFO @ Tue, 02 Aug 2022 13:32:12: #1 tag size = 51 INFO @ Tue, 02 Aug 2022 13:32:12: #1 total tags in treatment: 26024138 INFO @ Tue, 02 Aug 2022 13:32:12: #1 user defined the maximum tags... INFO @ Tue, 02 Aug 2022 13:32:12: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 02 Aug 2022 13:32:13: #1 tags after filtering in treatment: 16505514 INFO @ Tue, 02 Aug 2022 13:32:13: #1 Redundant rate of treatment: 0.37 INFO @ Tue, 02 Aug 2022 13:32:13: #1 finished! INFO @ Tue, 02 Aug 2022 13:32:13: #2 Build Peak Model... INFO @ Tue, 02 Aug 2022 13:32:13: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 02 Aug 2022 13:32:15: #2 number of paired peaks: 11837 INFO @ Tue, 02 Aug 2022 13:32:15: start model_add_line... INFO @ Tue, 02 Aug 2022 13:32:15: start X-correlation... INFO @ Tue, 02 Aug 2022 13:32:15: end of X-cor INFO @ Tue, 02 Aug 2022 13:32:15: #2 finished! INFO @ Tue, 02 Aug 2022 13:32:15: #2 predicted fragment length is 203 bps INFO @ Tue, 02 Aug 2022 13:32:15: #2 alternative fragment length(s) may be 203 bps INFO @ Tue, 02 Aug 2022 13:32:15: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/ERX5847875/ERX5847875.20_model.r INFO @ Tue, 02 Aug 2022 13:32:15: #3 Call peaks... INFO @ Tue, 02 Aug 2022 13:32:15: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 02 Aug 2022 13:32:16: #3 Call peaks for each chromosome... INFO @ Tue, 02 Aug 2022 13:32:34: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/ERX5847875/ERX5847875.05_peaks.xls INFO @ Tue, 02 Aug 2022 13:32:34: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/ERX5847875/ERX5847875.05_peaks.narrowPeak INFO @ Tue, 02 Aug 2022 13:32:34: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/ERX5847875/ERX5847875.05_summits.bed INFO @ Tue, 02 Aug 2022 13:32:34: Done! pass1 - making usageList (13 chroms): 2 millis pass2 - checking and writing primary data (9963 records, 4 fields): 133 millis CompletedMACS2peakCalling INFO @ Tue, 02 Aug 2022 13:32:35: #3 Call peaks for each chromosome... INFO @ Tue, 02 Aug 2022 13:32:53: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/ERX5847875/ERX5847875.10_peaks.xls INFO @ Tue, 02 Aug 2022 13:32:53: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/ERX5847875/ERX5847875.10_peaks.narrowPeak INFO @ Tue, 02 Aug 2022 13:32:54: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/ERX5847875/ERX5847875.10_summits.bed INFO @ Tue, 02 Aug 2022 13:32:54: Done! pass1 - making usageList (13 chroms): 1 millis pass2 - checking and writing primary data (9241 records, 4 fields): 30 millis CompletedMACS2peakCalling INFO @ Tue, 02 Aug 2022 13:33:08: #3 Call peaks for each chromosome... INFO @ Tue, 02 Aug 2022 13:33:25: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/ERX5847875/ERX5847875.20_peaks.xls INFO @ Tue, 02 Aug 2022 13:33:25: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/ERX5847875/ERX5847875.20_peaks.narrowPeak INFO @ Tue, 02 Aug 2022 13:33:25: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/ERX5847875/ERX5847875.20_summits.bed INFO @ Tue, 02 Aug 2022 13:33:25: Done! pass1 - making usageList (13 chroms): 2 millis pass2 - checking and writing primary data (7918 records, 4 fields): 20 millis CompletedMACS2peakCalling