Job ID = 14168661 SRX = ERX3978874 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 30449620 spots for ERR3975943/ERR3975943.sra Written 30449620 spots for ERR3975943/ERR3975943.sra fastq に変換しました。 bowtie でマッピング中... Your job 14170069 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:01 Multiseed full-index search: 03:50:33 30449620 reads; of these: 30449620 (100.00%) were paired; of these: 5439011 (17.86%) aligned concordantly 0 times 14179700 (46.57%) aligned concordantly exactly 1 time 10830909 (35.57%) aligned concordantly >1 times ---- 5439011 pairs aligned concordantly 0 times; of these: 551072 (10.13%) aligned discordantly 1 time ---- 4887939 pairs aligned 0 times concordantly or discordantly; of these: 9775878 mates make up the pairs; of these: 4684864 (47.92%) aligned 0 times 1566843 (16.03%) aligned exactly 1 time 3524171 (36.05%) aligned >1 times 92.31% overall alignment rate Time searching: 03:50:34 Overall time: 03:50:34 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 24 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 8289710 / 25296408 = 0.3277 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 10 Dec 2021 23:35:30: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/ERX3978874/ERX3978874.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/ERX3978874/ERX3978874.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/ERX3978874/ERX3978874.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/ERX3978874/ERX3978874.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 10 Dec 2021 23:35:30: #1 read tag files... INFO @ Fri, 10 Dec 2021 23:35:30: #1 read treatment tags... INFO @ Fri, 10 Dec 2021 23:35:39: 1000000 INFO @ Fri, 10 Dec 2021 23:35:47: 2000000 INFO @ Fri, 10 Dec 2021 23:35:56: 3000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 10 Dec 2021 23:35:59: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/ERX3978874/ERX3978874.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/ERX3978874/ERX3978874.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/ERX3978874/ERX3978874.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/ERX3978874/ERX3978874.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 10 Dec 2021 23:35:59: #1 read tag files... INFO @ Fri, 10 Dec 2021 23:35:59: #1 read treatment tags... INFO @ Fri, 10 Dec 2021 23:36:04: 4000000 INFO @ Fri, 10 Dec 2021 23:36:08: 1000000 INFO @ Fri, 10 Dec 2021 23:36:13: 5000000 INFO @ Fri, 10 Dec 2021 23:36:17: 2000000 INFO @ Fri, 10 Dec 2021 23:36:22: 6000000 INFO @ Fri, 10 Dec 2021 23:36:26: 3000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 10 Dec 2021 23:36:29: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/ERX3978874/ERX3978874.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/ERX3978874/ERX3978874.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/ERX3978874/ERX3978874.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/ERX3978874/ERX3978874.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 10 Dec 2021 23:36:29: #1 read tag files... INFO @ Fri, 10 Dec 2021 23:36:29: #1 read treatment tags... INFO @ Fri, 10 Dec 2021 23:36:31: 7000000 INFO @ Fri, 10 Dec 2021 23:36:35: 4000000 INFO @ Fri, 10 Dec 2021 23:36:38: 1000000 INFO @ Fri, 10 Dec 2021 23:36:40: 8000000 INFO @ Fri, 10 Dec 2021 23:36:44: 5000000 INFO @ Fri, 10 Dec 2021 23:36:48: 2000000 INFO @ Fri, 10 Dec 2021 23:36:49: 9000000 INFO @ Fri, 10 Dec 2021 23:36:53: 6000000 INFO @ Fri, 10 Dec 2021 23:36:57: 3000000 INFO @ Fri, 10 Dec 2021 23:36:58: 10000000 INFO @ Fri, 10 Dec 2021 23:37:02: 7000000 INFO @ Fri, 10 Dec 2021 23:37:07: 4000000 INFO @ Fri, 10 Dec 2021 23:37:07: 11000000 INFO @ Fri, 10 Dec 2021 23:37:11: 8000000 INFO @ Fri, 10 Dec 2021 23:37:15: 12000000 INFO @ Fri, 10 Dec 2021 23:37:16: 5000000 INFO @ Fri, 10 Dec 2021 23:37:20: 9000000 INFO @ Fri, 10 Dec 2021 23:37:24: 13000000 INFO @ Fri, 10 Dec 2021 23:37:26: 6000000 INFO @ Fri, 10 Dec 2021 23:37:29: 10000000 INFO @ Fri, 10 Dec 2021 23:37:33: 14000000 INFO @ Fri, 10 Dec 2021 23:37:35: 7000000 INFO @ Fri, 10 Dec 2021 23:37:38: 11000000 INFO @ Fri, 10 Dec 2021 23:37:42: 15000000 INFO @ Fri, 10 Dec 2021 23:37:45: 8000000 INFO @ Fri, 10 Dec 2021 23:37:48: 12000000 INFO @ Fri, 10 Dec 2021 23:37:51: 16000000 INFO @ Fri, 10 Dec 2021 23:37:54: 9000000 INFO @ Fri, 10 Dec 2021 23:37:57: 13000000 INFO @ Fri, 10 Dec 2021 23:38:00: 17000000 INFO @ Fri, 10 Dec 2021 23:38:04: 10000000 INFO @ Fri, 10 Dec 2021 23:38:06: 14000000 INFO @ Fri, 10 Dec 2021 23:38:09: 18000000 INFO @ Fri, 10 Dec 2021 23:38:14: 11000000 INFO @ Fri, 10 Dec 2021 23:38:15: 15000000 INFO @ Fri, 10 Dec 2021 23:38:18: 19000000 INFO @ Fri, 10 Dec 2021 23:38:23: 12000000 INFO @ Fri, 10 Dec 2021 23:38:24: 16000000 INFO @ Fri, 10 Dec 2021 23:38:27: 20000000 INFO @ Fri, 10 Dec 2021 23:38:33: 13000000 INFO @ Fri, 10 Dec 2021 23:38:33: 17000000 INFO @ Fri, 10 Dec 2021 23:38:36: 21000000 INFO @ Fri, 10 Dec 2021 23:38:42: 18000000 INFO @ Fri, 10 Dec 2021 23:38:43: 14000000 INFO @ Fri, 10 Dec 2021 23:38:45: 22000000 INFO @ Fri, 10 Dec 2021 23:38:52: 19000000 INFO @ Fri, 10 Dec 2021 23:38:52: 15000000 INFO @ Fri, 10 Dec 2021 23:38:54: 23000000 INFO @ Fri, 10 Dec 2021 23:39:01: 20000000 INFO @ Fri, 10 Dec 2021 23:39:01: 16000000 INFO @ Fri, 10 Dec 2021 23:39:03: 24000000 INFO @ Fri, 10 Dec 2021 23:39:09: 21000000 INFO @ Fri, 10 Dec 2021 23:39:11: 17000000 INFO @ Fri, 10 Dec 2021 23:39:11: 25000000 INFO @ Fri, 10 Dec 2021 23:39:19: 22000000 INFO @ Fri, 10 Dec 2021 23:39:20: 18000000 INFO @ Fri, 10 Dec 2021 23:39:20: 26000000 INFO @ Fri, 10 Dec 2021 23:39:28: 23000000 INFO @ Fri, 10 Dec 2021 23:39:29: 19000000 INFO @ Fri, 10 Dec 2021 23:39:29: 27000000 INFO @ Fri, 10 Dec 2021 23:39:37: 24000000 INFO @ Fri, 10 Dec 2021 23:39:38: 28000000 INFO @ Fri, 10 Dec 2021 23:39:39: 20000000 INFO @ Fri, 10 Dec 2021 23:39:46: 25000000 INFO @ Fri, 10 Dec 2021 23:39:47: 29000000 INFO @ Fri, 10 Dec 2021 23:39:48: 21000000 INFO @ Fri, 10 Dec 2021 23:39:55: 26000000 INFO @ Fri, 10 Dec 2021 23:39:56: 30000000 INFO @ Fri, 10 Dec 2021 23:39:57: 22000000 INFO @ Fri, 10 Dec 2021 23:40:04: 27000000 INFO @ Fri, 10 Dec 2021 23:40:05: 31000000 INFO @ Fri, 10 Dec 2021 23:40:07: 23000000 INFO @ Fri, 10 Dec 2021 23:40:13: 28000000 INFO @ Fri, 10 Dec 2021 23:40:14: 32000000 INFO @ Fri, 10 Dec 2021 23:40:16: 24000000 INFO @ Fri, 10 Dec 2021 23:40:22: 29000000 INFO @ Fri, 10 Dec 2021 23:40:23: 33000000 INFO @ Fri, 10 Dec 2021 23:40:26: 25000000 INFO @ Fri, 10 Dec 2021 23:40:31: 30000000 INFO @ Fri, 10 Dec 2021 23:40:31: 34000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Fri, 10 Dec 2021 23:40:35: 26000000 INFO @ Fri, 10 Dec 2021 23:40:40: 35000000 INFO @ Fri, 10 Dec 2021 23:40:40: 31000000 INFO @ Fri, 10 Dec 2021 23:40:44: 27000000 INFO @ Fri, 10 Dec 2021 23:40:49: 32000000 INFO @ Fri, 10 Dec 2021 23:40:49: 36000000 INFO @ Fri, 10 Dec 2021 23:40:54: 28000000 INFO @ Fri, 10 Dec 2021 23:40:57: 33000000 INFO @ Fri, 10 Dec 2021 23:40:58: 37000000 INFO @ Fri, 10 Dec 2021 23:41:04: 29000000 INFO @ Fri, 10 Dec 2021 23:41:06: 34000000 INFO @ Fri, 10 Dec 2021 23:41:07: 38000000 INFO @ Fri, 10 Dec 2021 23:41:13: 30000000 INFO @ Fri, 10 Dec 2021 23:41:14: 35000000 INFO @ Fri, 10 Dec 2021 23:41:15: 39000000 INFO @ Fri, 10 Dec 2021 23:41:22: #1 tag size is determined as 80 bps INFO @ Fri, 10 Dec 2021 23:41:22: #1 tag size = 80 INFO @ Fri, 10 Dec 2021 23:41:22: #1 total tags in treatment: 16803450 INFO @ Fri, 10 Dec 2021 23:41:22: #1 user defined the maximum tags... INFO @ Fri, 10 Dec 2021 23:41:22: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 10 Dec 2021 23:41:22: #1 tags after filtering in treatment: 14604034 INFO @ Fri, 10 Dec 2021 23:41:22: #1 Redundant rate of treatment: 0.13 INFO @ Fri, 10 Dec 2021 23:41:22: #1 finished! INFO @ Fri, 10 Dec 2021 23:41:22: #2 Build Peak Model... INFO @ Fri, 10 Dec 2021 23:41:22: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 10 Dec 2021 23:41:22: 31000000 INFO @ Fri, 10 Dec 2021 23:41:23: 36000000 INFO @ Fri, 10 Dec 2021 23:41:23: #2 number of paired peaks: 354 WARNING @ Fri, 10 Dec 2021 23:41:23: Fewer paired peaks (354) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 354 pairs to build model! INFO @ Fri, 10 Dec 2021 23:41:23: start model_add_line... INFO @ Fri, 10 Dec 2021 23:41:23: start X-correlation... INFO @ Fri, 10 Dec 2021 23:41:23: end of X-cor INFO @ Fri, 10 Dec 2021 23:41:23: #2 finished! INFO @ Fri, 10 Dec 2021 23:41:23: #2 predicted fragment length is 121 bps INFO @ Fri, 10 Dec 2021 23:41:23: #2 alternative fragment length(s) may be 121 bps INFO @ Fri, 10 Dec 2021 23:41:23: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/ERX3978874/ERX3978874.05_model.r WARNING @ Fri, 10 Dec 2021 23:41:23: #2 Since the d (121) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 10 Dec 2021 23:41:23: #2 You may need to consider one of the other alternative d(s): 121 WARNING @ Fri, 10 Dec 2021 23:41:23: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 10 Dec 2021 23:41:23: #3 Call peaks... INFO @ Fri, 10 Dec 2021 23:41:23: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 10 Dec 2021 23:41:31: 37000000 INFO @ Fri, 10 Dec 2021 23:41:31: 32000000 INFO @ Fri, 10 Dec 2021 23:41:39: 38000000 INFO @ Fri, 10 Dec 2021 23:41:40: 33000000 INFO @ Fri, 10 Dec 2021 23:41:47: 39000000 INFO @ Fri, 10 Dec 2021 23:41:49: 34000000 INFO @ Fri, 10 Dec 2021 23:41:53: #1 tag size is determined as 80 bps INFO @ Fri, 10 Dec 2021 23:41:53: #1 tag size = 80 INFO @ Fri, 10 Dec 2021 23:41:53: #1 total tags in treatment: 16803450 INFO @ Fri, 10 Dec 2021 23:41:53: #1 user defined the maximum tags... INFO @ Fri, 10 Dec 2021 23:41:53: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 10 Dec 2021 23:41:53: #1 tags after filtering in treatment: 14604034 INFO @ Fri, 10 Dec 2021 23:41:53: #1 Redundant rate of treatment: 0.13 INFO @ Fri, 10 Dec 2021 23:41:53: #1 finished! INFO @ Fri, 10 Dec 2021 23:41:53: #2 Build Peak Model... INFO @ Fri, 10 Dec 2021 23:41:53: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 10 Dec 2021 23:41:54: #2 number of paired peaks: 354 WARNING @ Fri, 10 Dec 2021 23:41:55: Fewer paired peaks (354) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 354 pairs to build model! INFO @ Fri, 10 Dec 2021 23:41:55: start model_add_line... INFO @ Fri, 10 Dec 2021 23:41:55: start X-correlation... INFO @ Fri, 10 Dec 2021 23:41:55: end of X-cor INFO @ Fri, 10 Dec 2021 23:41:55: #2 finished! INFO @ Fri, 10 Dec 2021 23:41:55: #2 predicted fragment length is 121 bps INFO @ Fri, 10 Dec 2021 23:41:55: #2 alternative fragment length(s) may be 121 bps INFO @ Fri, 10 Dec 2021 23:41:55: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/ERX3978874/ERX3978874.10_model.r WARNING @ Fri, 10 Dec 2021 23:41:55: #2 Since the d (121) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 10 Dec 2021 23:41:55: #2 You may need to consider one of the other alternative d(s): 121 WARNING @ Fri, 10 Dec 2021 23:41:55: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 10 Dec 2021 23:41:55: #3 Call peaks... INFO @ Fri, 10 Dec 2021 23:41:55: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 10 Dec 2021 23:41:58: 35000000 INFO @ Fri, 10 Dec 2021 23:42:03: #3 Call peaks for each chromosome... INFO @ Fri, 10 Dec 2021 23:42:07: 36000000 BigWig に変換しました。 INFO @ Fri, 10 Dec 2021 23:42:15: 37000000 INFO @ Fri, 10 Dec 2021 23:42:23: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/ERX3978874/ERX3978874.05_peaks.xls INFO @ Fri, 10 Dec 2021 23:42:23: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/ERX3978874/ERX3978874.05_peaks.narrowPeak INFO @ Fri, 10 Dec 2021 23:42:23: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/ERX3978874/ERX3978874.05_summits.bed INFO @ Fri, 10 Dec 2021 23:42:24: Done! pass1 - making usageList (15 chroms): 2 millis pass2 - checking and writing primary data (6859 records, 4 fields): 10 millis CompletedMACS2peakCalling INFO @ Fri, 10 Dec 2021 23:42:24: 38000000 INFO @ Fri, 10 Dec 2021 23:42:33: 39000000 INFO @ Fri, 10 Dec 2021 23:42:35: #3 Call peaks for each chromosome... INFO @ Fri, 10 Dec 2021 23:42:39: #1 tag size is determined as 80 bps INFO @ Fri, 10 Dec 2021 23:42:39: #1 tag size = 80 INFO @ Fri, 10 Dec 2021 23:42:39: #1 total tags in treatment: 16803450 INFO @ Fri, 10 Dec 2021 23:42:39: #1 user defined the maximum tags... INFO @ Fri, 10 Dec 2021 23:42:39: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 10 Dec 2021 23:42:39: #1 tags after filtering in treatment: 14604034 INFO @ Fri, 10 Dec 2021 23:42:39: #1 Redundant rate of treatment: 0.13 INFO @ Fri, 10 Dec 2021 23:42:39: #1 finished! INFO @ Fri, 10 Dec 2021 23:42:39: #2 Build Peak Model... INFO @ Fri, 10 Dec 2021 23:42:39: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 10 Dec 2021 23:42:40: #2 number of paired peaks: 354 WARNING @ Fri, 10 Dec 2021 23:42:40: Fewer paired peaks (354) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 354 pairs to build model! INFO @ Fri, 10 Dec 2021 23:42:40: start model_add_line... INFO @ Fri, 10 Dec 2021 23:42:41: start X-correlation... INFO @ Fri, 10 Dec 2021 23:42:41: end of X-cor INFO @ Fri, 10 Dec 2021 23:42:41: #2 finished! INFO @ Fri, 10 Dec 2021 23:42:41: #2 predicted fragment length is 121 bps INFO @ Fri, 10 Dec 2021 23:42:41: #2 alternative fragment length(s) may be 121 bps INFO @ Fri, 10 Dec 2021 23:42:41: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/ERX3978874/ERX3978874.20_model.r WARNING @ Fri, 10 Dec 2021 23:42:41: #2 Since the d (121) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 10 Dec 2021 23:42:41: #2 You may need to consider one of the other alternative d(s): 121 WARNING @ Fri, 10 Dec 2021 23:42:41: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 10 Dec 2021 23:42:41: #3 Call peaks... INFO @ Fri, 10 Dec 2021 23:42:41: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 10 Dec 2021 23:42:55: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/ERX3978874/ERX3978874.10_peaks.xls INFO @ Fri, 10 Dec 2021 23:42:55: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/ERX3978874/ERX3978874.10_peaks.narrowPeak INFO @ Fri, 10 Dec 2021 23:42:55: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/ERX3978874/ERX3978874.10_summits.bed INFO @ Fri, 10 Dec 2021 23:42:55: Done! pass1 - making usageList (15 chroms): 1 millis pass2 - checking and writing primary data (3696 records, 4 fields): 7 millis CompletedMACS2peakCalling INFO @ Fri, 10 Dec 2021 23:43:21: #3 Call peaks for each chromosome... INFO @ Fri, 10 Dec 2021 23:43:41: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/ERX3978874/ERX3978874.20_peaks.xls INFO @ Fri, 10 Dec 2021 23:43:41: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/ERX3978874/ERX3978874.20_peaks.narrowPeak INFO @ Fri, 10 Dec 2021 23:43:41: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/ERX3978874/ERX3978874.20_summits.bed INFO @ Fri, 10 Dec 2021 23:43:41: Done! pass1 - making usageList (15 chroms): 2 millis pass2 - checking and writing primary data (1544 records, 4 fields): 4 millis CompletedMACS2peakCalling