Job ID = 14168020 SRX = ERX3978811 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 26156455 spots for ERR3975853/ERR3975853.sra Written 26156455 spots for ERR3975853/ERR3975853.sra Read 25848084 spots for ERR3975855/ERR3975855.sra Written 25848084 spots for ERR3975855/ERR3975855.sra fastq に変換しました。 bowtie でマッピング中... Your job 14169002 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:33:43 52004539 reads; of these: 52004539 (100.00%) were paired; of these: 10090695 (19.40%) aligned concordantly 0 times 9617686 (18.49%) aligned concordantly exactly 1 time 32296158 (62.10%) aligned concordantly >1 times ---- 10090695 pairs aligned concordantly 0 times; of these: 1255573 (12.44%) aligned discordantly 1 time ---- 8835122 pairs aligned 0 times concordantly or discordantly; of these: 17670244 mates make up the pairs; of these: 4516617 (25.56%) aligned 0 times 480501 (2.72%) aligned exactly 1 time 12673126 (71.72%) aligned >1 times 95.66% overall alignment rate Time searching: 01:33:43 Overall time: 01:33:43 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 64 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 26732596 / 42665219 = 0.6266 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 10 Dec 2021 16:28:54: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/ERX3978811/ERX3978811.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/ERX3978811/ERX3978811.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/ERX3978811/ERX3978811.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/ERX3978811/ERX3978811.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 10 Dec 2021 16:28:54: #1 read tag files... INFO @ Fri, 10 Dec 2021 16:28:54: #1 read treatment tags... INFO @ Fri, 10 Dec 2021 16:28:59: 1000000 INFO @ Fri, 10 Dec 2021 16:29:05: 2000000 INFO @ Fri, 10 Dec 2021 16:29:10: 3000000 INFO @ Fri, 10 Dec 2021 16:29:16: 4000000 INFO @ Fri, 10 Dec 2021 16:29:21: 5000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 10 Dec 2021 16:29:24: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/ERX3978811/ERX3978811.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/ERX3978811/ERX3978811.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/ERX3978811/ERX3978811.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/ERX3978811/ERX3978811.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 10 Dec 2021 16:29:24: #1 read tag files... INFO @ Fri, 10 Dec 2021 16:29:24: #1 read treatment tags... INFO @ Fri, 10 Dec 2021 16:29:26: 6000000 INFO @ Fri, 10 Dec 2021 16:29:31: 1000000 INFO @ Fri, 10 Dec 2021 16:29:32: 7000000 INFO @ Fri, 10 Dec 2021 16:29:37: 8000000 INFO @ Fri, 10 Dec 2021 16:29:38: 2000000 INFO @ Fri, 10 Dec 2021 16:29:43: 9000000 INFO @ Fri, 10 Dec 2021 16:29:45: 3000000 INFO @ Fri, 10 Dec 2021 16:29:48: 10000000 INFO @ Fri, 10 Dec 2021 16:29:52: 4000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 10 Dec 2021 16:29:54: 11000000 INFO @ Fri, 10 Dec 2021 16:29:54: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/ERX3978811/ERX3978811.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/ERX3978811/ERX3978811.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/ERX3978811/ERX3978811.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/ERX3978811/ERX3978811.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 10 Dec 2021 16:29:54: #1 read tag files... INFO @ Fri, 10 Dec 2021 16:29:54: #1 read treatment tags... INFO @ Fri, 10 Dec 2021 16:29:59: 5000000 INFO @ Fri, 10 Dec 2021 16:30:00: 12000000 INFO @ Fri, 10 Dec 2021 16:30:00: 1000000 INFO @ Fri, 10 Dec 2021 16:30:05: 13000000 INFO @ Fri, 10 Dec 2021 16:30:05: 2000000 INFO @ Fri, 10 Dec 2021 16:30:06: 6000000 INFO @ Fri, 10 Dec 2021 16:30:10: 14000000 INFO @ Fri, 10 Dec 2021 16:30:11: 3000000 INFO @ Fri, 10 Dec 2021 16:30:13: 7000000 INFO @ Fri, 10 Dec 2021 16:30:16: 15000000 INFO @ Fri, 10 Dec 2021 16:30:16: 4000000 INFO @ Fri, 10 Dec 2021 16:30:20: 8000000 INFO @ Fri, 10 Dec 2021 16:30:22: 16000000 INFO @ Fri, 10 Dec 2021 16:30:22: 5000000 INFO @ Fri, 10 Dec 2021 16:30:27: 9000000 INFO @ Fri, 10 Dec 2021 16:30:27: 17000000 INFO @ Fri, 10 Dec 2021 16:30:27: 6000000 INFO @ Fri, 10 Dec 2021 16:30:33: 18000000 INFO @ Fri, 10 Dec 2021 16:30:33: 7000000 INFO @ Fri, 10 Dec 2021 16:30:34: 10000000 INFO @ Fri, 10 Dec 2021 16:30:38: 19000000 INFO @ Fri, 10 Dec 2021 16:30:39: 8000000 INFO @ Fri, 10 Dec 2021 16:30:41: 11000000 INFO @ Fri, 10 Dec 2021 16:30:44: 20000000 INFO @ Fri, 10 Dec 2021 16:30:44: 9000000 INFO @ Fri, 10 Dec 2021 16:30:48: 12000000 INFO @ Fri, 10 Dec 2021 16:30:49: 21000000 INFO @ Fri, 10 Dec 2021 16:30:50: 10000000 INFO @ Fri, 10 Dec 2021 16:30:54: 22000000 INFO @ Fri, 10 Dec 2021 16:30:55: 13000000 INFO @ Fri, 10 Dec 2021 16:30:55: 11000000 INFO @ Fri, 10 Dec 2021 16:30:59: 23000000 INFO @ Fri, 10 Dec 2021 16:31:01: 12000000 INFO @ Fri, 10 Dec 2021 16:31:02: 14000000 INFO @ Fri, 10 Dec 2021 16:31:04: 24000000 INFO @ Fri, 10 Dec 2021 16:31:06: 13000000 INFO @ Fri, 10 Dec 2021 16:31:09: 15000000 INFO @ Fri, 10 Dec 2021 16:31:09: 25000000 INFO @ Fri, 10 Dec 2021 16:31:12: 14000000 INFO @ Fri, 10 Dec 2021 16:31:14: 26000000 INFO @ Fri, 10 Dec 2021 16:31:16: 16000000 INFO @ Fri, 10 Dec 2021 16:31:17: 15000000 INFO @ Fri, 10 Dec 2021 16:31:19: 27000000 INFO @ Fri, 10 Dec 2021 16:31:23: 17000000 INFO @ Fri, 10 Dec 2021 16:31:23: 16000000 INFO @ Fri, 10 Dec 2021 16:31:24: 28000000 INFO @ Fri, 10 Dec 2021 16:31:28: 17000000 INFO @ Fri, 10 Dec 2021 16:31:30: 18000000 INFO @ Fri, 10 Dec 2021 16:31:30: 29000000 INFO @ Fri, 10 Dec 2021 16:31:34: 18000000 INFO @ Fri, 10 Dec 2021 16:31:35: 30000000 INFO @ Fri, 10 Dec 2021 16:31:37: 19000000 INFO @ Fri, 10 Dec 2021 16:31:40: 19000000 INFO @ Fri, 10 Dec 2021 16:31:40: 31000000 INFO @ Fri, 10 Dec 2021 16:31:43: 20000000 INFO @ Fri, 10 Dec 2021 16:31:45: 32000000 INFO @ Fri, 10 Dec 2021 16:31:46: 20000000 INFO @ Fri, 10 Dec 2021 16:31:50: 21000000 INFO @ Fri, 10 Dec 2021 16:31:50: 33000000 INFO @ Fri, 10 Dec 2021 16:31:52: 21000000 INFO @ Fri, 10 Dec 2021 16:31:56: 34000000 INFO @ Fri, 10 Dec 2021 16:31:57: 22000000 INFO @ Fri, 10 Dec 2021 16:31:58: 22000000 INFO @ Fri, 10 Dec 2021 16:32:01: 35000000 INFO @ Fri, 10 Dec 2021 16:32:03: 23000000 INFO @ Fri, 10 Dec 2021 16:32:05: 23000000 INFO @ Fri, 10 Dec 2021 16:32:06: 36000000 INFO @ Fri, 10 Dec 2021 16:32:10: 24000000 INFO @ Fri, 10 Dec 2021 16:32:11: 24000000 INFO @ Fri, 10 Dec 2021 16:32:11: 37000000 INFO @ Fri, 10 Dec 2021 16:32:17: 25000000 INFO @ Fri, 10 Dec 2021 16:32:17: 38000000 INFO @ Fri, 10 Dec 2021 16:32:18: 25000000 INFO @ Fri, 10 Dec 2021 16:32:22: 39000000 INFO @ Fri, 10 Dec 2021 16:32:23: 26000000 INFO @ Fri, 10 Dec 2021 16:32:24: 26000000 INFO @ Fri, 10 Dec 2021 16:32:28: 40000000 INFO @ Fri, 10 Dec 2021 16:32:30: 27000000 INFO @ Fri, 10 Dec 2021 16:32:31: 27000000 INFO @ Fri, 10 Dec 2021 16:32:33: 41000000 INFO @ Fri, 10 Dec 2021 16:32:37: 28000000 INFO @ Fri, 10 Dec 2021 16:32:38: 28000000 INFO @ Fri, 10 Dec 2021 16:32:39: 42000000 INFO @ Fri, 10 Dec 2021 16:32:43: 29000000 INFO @ Fri, 10 Dec 2021 16:32:44: 29000000 INFO @ Fri, 10 Dec 2021 16:32:45: 43000000 INFO @ Fri, 10 Dec 2021 16:32:50: 30000000 INFO @ Fri, 10 Dec 2021 16:32:50: 44000000 INFO @ Fri, 10 Dec 2021 16:32:51: 30000000 INFO @ Fri, 10 Dec 2021 16:32:56: 45000000 INFO @ Fri, 10 Dec 2021 16:32:57: 31000000 INFO @ Fri, 10 Dec 2021 16:32:58: 31000000 INFO @ Fri, 10 Dec 2021 16:33:01: 46000000 INFO @ Fri, 10 Dec 2021 16:33:01: #1 tag size is determined as 121 bps INFO @ Fri, 10 Dec 2021 16:33:01: #1 tag size = 121 INFO @ Fri, 10 Dec 2021 16:33:01: #1 total tags in treatment: 15275935 INFO @ Fri, 10 Dec 2021 16:33:01: #1 user defined the maximum tags... INFO @ Fri, 10 Dec 2021 16:33:01: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 10 Dec 2021 16:33:02: #1 tags after filtering in treatment: 10770516 INFO @ Fri, 10 Dec 2021 16:33:02: #1 Redundant rate of treatment: 0.29 INFO @ Fri, 10 Dec 2021 16:33:02: #1 finished! INFO @ Fri, 10 Dec 2021 16:33:02: #2 Build Peak Model... INFO @ Fri, 10 Dec 2021 16:33:02: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 10 Dec 2021 16:33:02: #2 number of paired peaks: 933 WARNING @ Fri, 10 Dec 2021 16:33:02: Fewer paired peaks (933) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 933 pairs to build model! INFO @ Fri, 10 Dec 2021 16:33:02: start model_add_line... INFO @ Fri, 10 Dec 2021 16:33:03: start X-correlation... INFO @ Fri, 10 Dec 2021 16:33:03: end of X-cor INFO @ Fri, 10 Dec 2021 16:33:03: #2 finished! INFO @ Fri, 10 Dec 2021 16:33:03: #2 predicted fragment length is 146 bps INFO @ Fri, 10 Dec 2021 16:33:03: #2 alternative fragment length(s) may be 146 bps INFO @ Fri, 10 Dec 2021 16:33:03: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/ERX3978811/ERX3978811.05_model.r WARNING @ Fri, 10 Dec 2021 16:33:03: #2 Since the d (146) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 10 Dec 2021 16:33:03: #2 You may need to consider one of the other alternative d(s): 146 WARNING @ Fri, 10 Dec 2021 16:33:03: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 10 Dec 2021 16:33:03: #3 Call peaks... INFO @ Fri, 10 Dec 2021 16:33:03: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 10 Dec 2021 16:33:04: 32000000 INFO @ Fri, 10 Dec 2021 16:33:04: 32000000 INFO @ Fri, 10 Dec 2021 16:33:10: 33000000 INFO @ Fri, 10 Dec 2021 16:33:11: 33000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Fri, 10 Dec 2021 16:33:17: 34000000 INFO @ Fri, 10 Dec 2021 16:33:18: 34000000 INFO @ Fri, 10 Dec 2021 16:33:23: 35000000 INFO @ Fri, 10 Dec 2021 16:33:23: #3 Call peaks for each chromosome... INFO @ Fri, 10 Dec 2021 16:33:24: 35000000 INFO @ Fri, 10 Dec 2021 16:33:30: 36000000 INFO @ Fri, 10 Dec 2021 16:33:31: 36000000 INFO @ Fri, 10 Dec 2021 16:33:34: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/ERX3978811/ERX3978811.05_peaks.xls INFO @ Fri, 10 Dec 2021 16:33:34: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/ERX3978811/ERX3978811.05_peaks.narrowPeak INFO @ Fri, 10 Dec 2021 16:33:34: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/ERX3978811/ERX3978811.05_summits.bed INFO @ Fri, 10 Dec 2021 16:33:34: Done! pass1 - making usageList (15 chroms): 2 millis pass2 - checking and writing primary data (10475 records, 4 fields): 10 millis CompletedMACS2peakCalling INFO @ Fri, 10 Dec 2021 16:33:37: 37000000 INFO @ Fri, 10 Dec 2021 16:33:38: 37000000 INFO @ Fri, 10 Dec 2021 16:33:43: 38000000 INFO @ Fri, 10 Dec 2021 16:33:44: 38000000 INFO @ Fri, 10 Dec 2021 16:33:50: 39000000 INFO @ Fri, 10 Dec 2021 16:33:51: 39000000 INFO @ Fri, 10 Dec 2021 16:33:57: 40000000 INFO @ Fri, 10 Dec 2021 16:33:58: 40000000 INFO @ Fri, 10 Dec 2021 16:34:04: 41000000 INFO @ Fri, 10 Dec 2021 16:34:05: 41000000 BigWig に変換しました。 INFO @ Fri, 10 Dec 2021 16:34:11: 42000000 INFO @ Fri, 10 Dec 2021 16:34:12: 42000000 INFO @ Fri, 10 Dec 2021 16:34:18: 43000000 INFO @ Fri, 10 Dec 2021 16:34:19: 43000000 INFO @ Fri, 10 Dec 2021 16:34:25: 44000000 INFO @ Fri, 10 Dec 2021 16:34:26: 44000000 INFO @ Fri, 10 Dec 2021 16:34:32: 45000000 INFO @ Fri, 10 Dec 2021 16:34:32: 45000000 INFO @ Fri, 10 Dec 2021 16:34:38: 46000000 INFO @ Fri, 10 Dec 2021 16:34:39: #1 tag size is determined as 121 bps INFO @ Fri, 10 Dec 2021 16:34:39: #1 tag size = 121 INFO @ Fri, 10 Dec 2021 16:34:39: #1 total tags in treatment: 15275935 INFO @ Fri, 10 Dec 2021 16:34:39: #1 user defined the maximum tags... INFO @ Fri, 10 Dec 2021 16:34:39: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 10 Dec 2021 16:34:39: 46000000 INFO @ Fri, 10 Dec 2021 16:34:39: #1 tags after filtering in treatment: 10770516 INFO @ Fri, 10 Dec 2021 16:34:39: #1 Redundant rate of treatment: 0.29 INFO @ Fri, 10 Dec 2021 16:34:39: #1 finished! INFO @ Fri, 10 Dec 2021 16:34:39: #2 Build Peak Model... INFO @ Fri, 10 Dec 2021 16:34:39: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 10 Dec 2021 16:34:39: #1 tag size is determined as 121 bps INFO @ Fri, 10 Dec 2021 16:34:39: #1 tag size = 121 INFO @ Fri, 10 Dec 2021 16:34:39: #1 total tags in treatment: 15275935 INFO @ Fri, 10 Dec 2021 16:34:39: #1 user defined the maximum tags... INFO @ Fri, 10 Dec 2021 16:34:39: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 10 Dec 2021 16:34:39: #1 tags after filtering in treatment: 10770516 INFO @ Fri, 10 Dec 2021 16:34:39: #1 Redundant rate of treatment: 0.29 INFO @ Fri, 10 Dec 2021 16:34:39: #1 finished! INFO @ Fri, 10 Dec 2021 16:34:39: #2 Build Peak Model... INFO @ Fri, 10 Dec 2021 16:34:39: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 10 Dec 2021 16:34:40: #2 number of paired peaks: 933 WARNING @ Fri, 10 Dec 2021 16:34:40: Fewer paired peaks (933) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 933 pairs to build model! INFO @ Fri, 10 Dec 2021 16:34:40: start model_add_line... INFO @ Fri, 10 Dec 2021 16:34:40: start X-correlation... INFO @ Fri, 10 Dec 2021 16:34:40: end of X-cor INFO @ Fri, 10 Dec 2021 16:34:40: #2 finished! INFO @ Fri, 10 Dec 2021 16:34:40: #2 predicted fragment length is 146 bps INFO @ Fri, 10 Dec 2021 16:34:40: #2 alternative fragment length(s) may be 146 bps INFO @ Fri, 10 Dec 2021 16:34:40: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/ERX3978811/ERX3978811.10_model.r WARNING @ Fri, 10 Dec 2021 16:34:40: #2 Since the d (146) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 10 Dec 2021 16:34:40: #2 You may need to consider one of the other alternative d(s): 146 WARNING @ Fri, 10 Dec 2021 16:34:40: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 10 Dec 2021 16:34:40: #3 Call peaks... INFO @ Fri, 10 Dec 2021 16:34:40: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 10 Dec 2021 16:34:40: #2 number of paired peaks: 933 WARNING @ Fri, 10 Dec 2021 16:34:40: Fewer paired peaks (933) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 933 pairs to build model! INFO @ Fri, 10 Dec 2021 16:34:40: start model_add_line... INFO @ Fri, 10 Dec 2021 16:34:40: start X-correlation... INFO @ Fri, 10 Dec 2021 16:34:40: end of X-cor INFO @ Fri, 10 Dec 2021 16:34:40: #2 finished! INFO @ Fri, 10 Dec 2021 16:34:40: #2 predicted fragment length is 146 bps INFO @ Fri, 10 Dec 2021 16:34:40: #2 alternative fragment length(s) may be 146 bps INFO @ Fri, 10 Dec 2021 16:34:40: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/ERX3978811/ERX3978811.20_model.r WARNING @ Fri, 10 Dec 2021 16:34:40: #2 Since the d (146) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 10 Dec 2021 16:34:40: #2 You may need to consider one of the other alternative d(s): 146 WARNING @ Fri, 10 Dec 2021 16:34:40: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 10 Dec 2021 16:34:40: #3 Call peaks... INFO @ Fri, 10 Dec 2021 16:34:40: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 10 Dec 2021 16:35:02: #3 Call peaks for each chromosome... INFO @ Fri, 10 Dec 2021 16:35:02: #3 Call peaks for each chromosome... INFO @ Fri, 10 Dec 2021 16:35:12: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/ERX3978811/ERX3978811.10_peaks.xls INFO @ Fri, 10 Dec 2021 16:35:12: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/ERX3978811/ERX3978811.10_peaks.narrowPeak INFO @ Fri, 10 Dec 2021 16:35:12: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/ERX3978811/ERX3978811.10_summits.bed INFO @ Fri, 10 Dec 2021 16:35:12: Done! pass1 - making usageList (15 chroms): 1 millis pass2 - checking and writing primary data (6395 records, 4 fields): 7 millis CompletedMACS2peakCalling INFO @ Fri, 10 Dec 2021 16:35:13: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/ERX3978811/ERX3978811.20_peaks.xls INFO @ Fri, 10 Dec 2021 16:35:13: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/ERX3978811/ERX3978811.20_peaks.narrowPeak INFO @ Fri, 10 Dec 2021 16:35:13: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/ERX3978811/ERX3978811.20_summits.bed INFO @ Fri, 10 Dec 2021 16:35:13: Done! pass1 - making usageList (15 chroms): 1 millis pass2 - checking and writing primary data (2674 records, 4 fields): 8 millis CompletedMACS2peakCalling