Job ID = 14158201 SRX = SRX8948257 Genome = ce11 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:48:52 43445486 reads; of these: 43445486 (100.00%) were paired; of these: 1005463 (2.31%) aligned concordantly 0 times 36726414 (84.53%) aligned concordantly exactly 1 time 5713609 (13.15%) aligned concordantly >1 times ---- 1005463 pairs aligned concordantly 0 times; of these: 135812 (13.51%) aligned discordantly 1 time ---- 869651 pairs aligned 0 times concordantly or discordantly; of these: 1739302 mates make up the pairs; of these: 1467658 (84.38%) aligned 0 times 178371 (10.26%) aligned exactly 1 time 93273 (5.36%) aligned >1 times 98.31% overall alignment rate Time searching: 00:48:52 Overall time: 00:48:52 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 36 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 1284247 / 41953133 = 0.0306 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Wed, 08 Dec 2021 15:55:49: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX8948257/SRX8948257.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX8948257/SRX8948257.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX8948257/SRX8948257.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX8948257/SRX8948257.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Wed, 08 Dec 2021 15:55:49: #1 read tag files... INFO @ Wed, 08 Dec 2021 15:55:49: #1 read treatment tags... INFO @ Wed, 08 Dec 2021 15:55:55: 1000000 INFO @ Wed, 08 Dec 2021 15:56:00: 2000000 INFO @ Wed, 08 Dec 2021 15:56:06: 3000000 INFO @ Wed, 08 Dec 2021 15:56:11: 4000000 INFO @ Wed, 08 Dec 2021 15:56:16: 5000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Wed, 08 Dec 2021 15:56:18: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX8948257/SRX8948257.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX8948257/SRX8948257.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX8948257/SRX8948257.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX8948257/SRX8948257.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Wed, 08 Dec 2021 15:56:18: #1 read tag files... INFO @ Wed, 08 Dec 2021 15:56:18: #1 read treatment tags... INFO @ Wed, 08 Dec 2021 15:56:22: 6000000 INFO @ Wed, 08 Dec 2021 15:56:25: 1000000 INFO @ Wed, 08 Dec 2021 15:56:29: 7000000 INFO @ Wed, 08 Dec 2021 15:56:32: 2000000 INFO @ Wed, 08 Dec 2021 15:56:35: 8000000 INFO @ Wed, 08 Dec 2021 15:56:39: 3000000 INFO @ Wed, 08 Dec 2021 15:56:42: 9000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Wed, 08 Dec 2021 15:56:47: 4000000 INFO @ Wed, 08 Dec 2021 15:56:48: 10000000 INFO @ Wed, 08 Dec 2021 15:56:48: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX8948257/SRX8948257.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX8948257/SRX8948257.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX8948257/SRX8948257.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX8948257/SRX8948257.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Wed, 08 Dec 2021 15:56:48: #1 read tag files... INFO @ Wed, 08 Dec 2021 15:56:48: #1 read treatment tags... INFO @ Wed, 08 Dec 2021 15:56:55: 5000000 INFO @ Wed, 08 Dec 2021 15:56:55: 11000000 INFO @ Wed, 08 Dec 2021 15:56:55: 1000000 INFO @ Wed, 08 Dec 2021 15:57:01: 12000000 INFO @ Wed, 08 Dec 2021 15:57:02: 2000000 INFO @ Wed, 08 Dec 2021 15:57:02: 6000000 INFO @ Wed, 08 Dec 2021 15:57:08: 13000000 INFO @ Wed, 08 Dec 2021 15:57:10: 3000000 INFO @ Wed, 08 Dec 2021 15:57:10: 7000000 INFO @ Wed, 08 Dec 2021 15:57:15: 14000000 INFO @ Wed, 08 Dec 2021 15:57:17: 4000000 INFO @ Wed, 08 Dec 2021 15:57:18: 8000000 INFO @ Wed, 08 Dec 2021 15:57:21: 15000000 INFO @ Wed, 08 Dec 2021 15:57:24: 5000000 INFO @ Wed, 08 Dec 2021 15:57:25: 9000000 INFO @ Wed, 08 Dec 2021 15:57:28: 16000000 INFO @ Wed, 08 Dec 2021 15:57:31: 6000000 INFO @ Wed, 08 Dec 2021 15:57:33: 10000000 INFO @ Wed, 08 Dec 2021 15:57:34: 17000000 INFO @ Wed, 08 Dec 2021 15:57:39: 7000000 INFO @ Wed, 08 Dec 2021 15:57:40: 11000000 INFO @ Wed, 08 Dec 2021 15:57:41: 18000000 INFO @ Wed, 08 Dec 2021 15:57:46: 8000000 INFO @ Wed, 08 Dec 2021 15:57:47: 19000000 INFO @ Wed, 08 Dec 2021 15:57:48: 12000000 INFO @ Wed, 08 Dec 2021 15:57:53: 9000000 INFO @ Wed, 08 Dec 2021 15:57:54: 20000000 INFO @ Wed, 08 Dec 2021 15:57:56: 13000000 INFO @ Wed, 08 Dec 2021 15:58:01: 21000000 INFO @ Wed, 08 Dec 2021 15:58:01: 10000000 INFO @ Wed, 08 Dec 2021 15:58:03: 14000000 INFO @ Wed, 08 Dec 2021 15:58:07: 22000000 INFO @ Wed, 08 Dec 2021 15:58:08: 11000000 INFO @ Wed, 08 Dec 2021 15:58:11: 15000000 INFO @ Wed, 08 Dec 2021 15:58:14: 23000000 INFO @ Wed, 08 Dec 2021 15:58:16: 12000000 INFO @ Wed, 08 Dec 2021 15:58:18: 16000000 INFO @ Wed, 08 Dec 2021 15:58:20: 24000000 INFO @ Wed, 08 Dec 2021 15:58:23: 13000000 INFO @ Wed, 08 Dec 2021 15:58:26: 17000000 INFO @ Wed, 08 Dec 2021 15:58:27: 25000000 INFO @ Wed, 08 Dec 2021 15:58:30: 14000000 INFO @ Wed, 08 Dec 2021 15:58:33: 18000000 INFO @ Wed, 08 Dec 2021 15:58:34: 26000000 INFO @ Wed, 08 Dec 2021 15:58:38: 15000000 INFO @ Wed, 08 Dec 2021 15:58:40: 27000000 INFO @ Wed, 08 Dec 2021 15:58:41: 19000000 INFO @ Wed, 08 Dec 2021 15:58:45: 16000000 INFO @ Wed, 08 Dec 2021 15:58:47: 28000000 INFO @ Wed, 08 Dec 2021 15:58:48: 20000000 INFO @ Wed, 08 Dec 2021 15:58:53: 17000000 INFO @ Wed, 08 Dec 2021 15:58:53: 29000000 INFO @ Wed, 08 Dec 2021 15:58:56: 21000000 INFO @ Wed, 08 Dec 2021 15:59:00: 30000000 INFO @ Wed, 08 Dec 2021 15:59:01: 18000000 INFO @ Wed, 08 Dec 2021 15:59:03: 22000000 INFO @ Wed, 08 Dec 2021 15:59:06: 31000000 INFO @ Wed, 08 Dec 2021 15:59:08: 19000000 INFO @ Wed, 08 Dec 2021 15:59:11: 23000000 INFO @ Wed, 08 Dec 2021 15:59:13: 32000000 INFO @ Wed, 08 Dec 2021 15:59:16: 20000000 INFO @ Wed, 08 Dec 2021 15:59:18: 24000000 INFO @ Wed, 08 Dec 2021 15:59:20: 33000000 INFO @ Wed, 08 Dec 2021 15:59:23: 21000000 INFO @ Wed, 08 Dec 2021 15:59:26: 25000000 INFO @ Wed, 08 Dec 2021 15:59:26: 34000000 INFO @ Wed, 08 Dec 2021 15:59:31: 22000000 INFO @ Wed, 08 Dec 2021 15:59:33: 35000000 INFO @ Wed, 08 Dec 2021 15:59:34: 26000000 INFO @ Wed, 08 Dec 2021 15:59:39: 23000000 INFO @ Wed, 08 Dec 2021 15:59:39: 36000000 INFO @ Wed, 08 Dec 2021 15:59:41: 27000000 INFO @ Wed, 08 Dec 2021 15:59:46: 37000000 INFO @ Wed, 08 Dec 2021 15:59:46: 24000000 INFO @ Wed, 08 Dec 2021 15:59:49: 28000000 INFO @ Wed, 08 Dec 2021 15:59:52: 38000000 INFO @ Wed, 08 Dec 2021 15:59:54: 25000000 INFO @ Wed, 08 Dec 2021 15:59:56: 29000000 INFO @ Wed, 08 Dec 2021 15:59:59: 39000000 INFO @ Wed, 08 Dec 2021 16:00:01: 26000000 INFO @ Wed, 08 Dec 2021 16:00:04: 30000000 INFO @ Wed, 08 Dec 2021 16:00:05: 40000000 INFO @ Wed, 08 Dec 2021 16:00:09: 27000000 INFO @ Wed, 08 Dec 2021 16:00:11: 31000000 INFO @ Wed, 08 Dec 2021 16:00:12: 41000000 INFO @ Wed, 08 Dec 2021 16:00:17: 28000000 INFO @ Wed, 08 Dec 2021 16:00:19: 42000000 INFO @ Wed, 08 Dec 2021 16:00:19: 32000000 INFO @ Wed, 08 Dec 2021 16:00:25: 29000000 INFO @ Wed, 08 Dec 2021 16:00:26: 43000000 INFO @ Wed, 08 Dec 2021 16:00:26: 33000000 INFO @ Wed, 08 Dec 2021 16:00:32: 44000000 INFO @ Wed, 08 Dec 2021 16:00:32: 30000000 INFO @ Wed, 08 Dec 2021 16:00:34: 34000000 INFO @ Wed, 08 Dec 2021 16:00:39: 45000000 INFO @ Wed, 08 Dec 2021 16:00:40: 31000000 INFO @ Wed, 08 Dec 2021 16:00:42: 35000000 INFO @ Wed, 08 Dec 2021 16:00:46: 46000000 INFO @ Wed, 08 Dec 2021 16:00:48: 32000000 INFO @ Wed, 08 Dec 2021 16:00:49: 36000000 INFO @ Wed, 08 Dec 2021 16:00:54: 47000000 INFO @ Wed, 08 Dec 2021 16:00:56: 33000000 INFO @ Wed, 08 Dec 2021 16:00:57: 37000000 INFO @ Wed, 08 Dec 2021 16:01:01: 48000000 INFO @ Wed, 08 Dec 2021 16:01:03: 34000000 INFO @ Wed, 08 Dec 2021 16:01:05: 38000000 INFO @ Wed, 08 Dec 2021 16:01:08: 49000000 INFO @ Wed, 08 Dec 2021 16:01:11: 35000000 INFO @ Wed, 08 Dec 2021 16:01:13: 39000000 INFO @ Wed, 08 Dec 2021 16:01:14: 50000000 INFO @ Wed, 08 Dec 2021 16:01:19: 36000000 INFO @ Wed, 08 Dec 2021 16:01:21: 40000000 INFO @ Wed, 08 Dec 2021 16:01:21: 51000000 INFO @ Wed, 08 Dec 2021 16:01:27: 37000000 INFO @ Wed, 08 Dec 2021 16:01:28: 52000000 INFO @ Wed, 08 Dec 2021 16:01:28: 41000000 INFO @ Wed, 08 Dec 2021 16:01:34: 53000000 INFO @ Wed, 08 Dec 2021 16:01:34: 38000000 INFO @ Wed, 08 Dec 2021 16:01:36: 42000000 INFO @ Wed, 08 Dec 2021 16:01:41: 54000000 INFO @ Wed, 08 Dec 2021 16:01:42: 39000000 INFO @ Wed, 08 Dec 2021 16:01:43: 43000000 INFO @ Wed, 08 Dec 2021 16:01:47: 55000000 INFO @ Wed, 08 Dec 2021 16:01:50: 40000000 INFO @ Wed, 08 Dec 2021 16:01:51: 44000000 INFO @ Wed, 08 Dec 2021 16:01:54: 56000000 INFO @ Wed, 08 Dec 2021 16:01:57: 41000000 BedGraph に変換しました。 INFO @ Wed, 08 Dec 2021 16:01:58: 45000000 BigWig に変換中... INFO @ Wed, 08 Dec 2021 16:02:01: 57000000 INFO @ Wed, 08 Dec 2021 16:02:05: 42000000 INFO @ Wed, 08 Dec 2021 16:02:06: 46000000 INFO @ Wed, 08 Dec 2021 16:02:07: 58000000 INFO @ Wed, 08 Dec 2021 16:02:12: 43000000 INFO @ Wed, 08 Dec 2021 16:02:12: 47000000 INFO @ Wed, 08 Dec 2021 16:02:14: 59000000 INFO @ Wed, 08 Dec 2021 16:02:19: 48000000 INFO @ Wed, 08 Dec 2021 16:02:19: 44000000 INFO @ Wed, 08 Dec 2021 16:02:20: 60000000 INFO @ Wed, 08 Dec 2021 16:02:26: 49000000 INFO @ Wed, 08 Dec 2021 16:02:27: 45000000 INFO @ Wed, 08 Dec 2021 16:02:27: 61000000 INFO @ Wed, 08 Dec 2021 16:02:34: 62000000 INFO @ Wed, 08 Dec 2021 16:02:34: 50000000 INFO @ Wed, 08 Dec 2021 16:02:34: 46000000 INFO @ Wed, 08 Dec 2021 16:02:40: 63000000 INFO @ Wed, 08 Dec 2021 16:02:41: 47000000 INFO @ Wed, 08 Dec 2021 16:02:42: 51000000 INFO @ Wed, 08 Dec 2021 16:02:47: 64000000 INFO @ Wed, 08 Dec 2021 16:02:47: 48000000 INFO @ Wed, 08 Dec 2021 16:02:49: 52000000 INFO @ Wed, 08 Dec 2021 16:02:54: 65000000 INFO @ Wed, 08 Dec 2021 16:02:55: 49000000 INFO @ Wed, 08 Dec 2021 16:02:57: 53000000 INFO @ Wed, 08 Dec 2021 16:03:00: 66000000 INFO @ Wed, 08 Dec 2021 16:03:03: 50000000 INFO @ Wed, 08 Dec 2021 16:03:04: 54000000 INFO @ Wed, 08 Dec 2021 16:03:07: 67000000 INFO @ Wed, 08 Dec 2021 16:03:11: 51000000 INFO @ Wed, 08 Dec 2021 16:03:11: 55000000 INFO @ Wed, 08 Dec 2021 16:03:14: 68000000 INFO @ Wed, 08 Dec 2021 16:03:19: 52000000 INFO @ Wed, 08 Dec 2021 16:03:19: 56000000 INFO @ Wed, 08 Dec 2021 16:03:20: 69000000 BigWig に変換しました。 INFO @ Wed, 08 Dec 2021 16:03:26: 57000000 INFO @ Wed, 08 Dec 2021 16:03:26: 53000000 INFO @ Wed, 08 Dec 2021 16:03:27: 70000000 INFO @ Wed, 08 Dec 2021 16:03:33: 71000000 INFO @ Wed, 08 Dec 2021 16:03:34: 58000000 INFO @ Wed, 08 Dec 2021 16:03:34: 54000000 INFO @ Wed, 08 Dec 2021 16:03:40: 72000000 INFO @ Wed, 08 Dec 2021 16:03:41: 59000000 INFO @ Wed, 08 Dec 2021 16:03:42: 55000000 INFO @ Wed, 08 Dec 2021 16:03:46: 73000000 INFO @ Wed, 08 Dec 2021 16:03:48: 60000000 INFO @ Wed, 08 Dec 2021 16:03:49: 56000000 INFO @ Wed, 08 Dec 2021 16:03:53: 74000000 INFO @ Wed, 08 Dec 2021 16:03:56: 61000000 INFO @ Wed, 08 Dec 2021 16:03:57: 57000000 INFO @ Wed, 08 Dec 2021 16:03:59: 75000000 INFO @ Wed, 08 Dec 2021 16:04:04: 62000000 INFO @ Wed, 08 Dec 2021 16:04:05: 58000000 INFO @ Wed, 08 Dec 2021 16:04:06: 76000000 INFO @ Wed, 08 Dec 2021 16:04:11: 63000000 INFO @ Wed, 08 Dec 2021 16:04:12: 77000000 INFO @ Wed, 08 Dec 2021 16:04:12: 59000000 INFO @ Wed, 08 Dec 2021 16:04:18: 78000000 INFO @ Wed, 08 Dec 2021 16:04:19: 64000000 INFO @ Wed, 08 Dec 2021 16:04:20: 60000000 INFO @ Wed, 08 Dec 2021 16:04:25: 79000000 INFO @ Wed, 08 Dec 2021 16:04:27: 65000000 INFO @ Wed, 08 Dec 2021 16:04:28: 61000000 INFO @ Wed, 08 Dec 2021 16:04:31: 80000000 INFO @ Wed, 08 Dec 2021 16:04:34: 66000000 INFO @ Wed, 08 Dec 2021 16:04:35: 62000000 INFO @ Wed, 08 Dec 2021 16:04:38: 81000000 INFO @ Wed, 08 Dec 2021 16:04:42: 67000000 INFO @ Wed, 08 Dec 2021 16:04:43: 63000000 INFO @ Wed, 08 Dec 2021 16:04:44: 82000000 INFO @ Wed, 08 Dec 2021 16:04:49: 68000000 INFO @ Wed, 08 Dec 2021 16:04:50: #1 tag size is determined as 74 bps INFO @ Wed, 08 Dec 2021 16:04:50: #1 tag size = 74 INFO @ Wed, 08 Dec 2021 16:04:50: #1 total tags in treatment: 41157186 INFO @ Wed, 08 Dec 2021 16:04:50: #1 user defined the maximum tags... INFO @ Wed, 08 Dec 2021 16:04:50: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Wed, 08 Dec 2021 16:04:51: 64000000 INFO @ Wed, 08 Dec 2021 16:04:51: #1 tags after filtering in treatment: 35709167 INFO @ Wed, 08 Dec 2021 16:04:51: #1 Redundant rate of treatment: 0.13 INFO @ Wed, 08 Dec 2021 16:04:51: #1 finished! INFO @ Wed, 08 Dec 2021 16:04:51: #2 Build Peak Model... INFO @ Wed, 08 Dec 2021 16:04:51: #2 looking for paired plus/minus strand peaks... INFO @ Wed, 08 Dec 2021 16:04:53: #2 number of paired peaks: 29 WARNING @ Wed, 08 Dec 2021 16:04:53: Too few paired peaks (29) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Wed, 08 Dec 2021 16:04:53: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce11/SRX8948257/SRX8948257.05_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX8948257/SRX8948257.05_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX8948257/SRX8948257.05_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX8948257/SRX8948257.05_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Wed, 08 Dec 2021 16:04:57: 69000000 INFO @ Wed, 08 Dec 2021 16:04:58: 65000000 INFO @ Wed, 08 Dec 2021 16:05:04: 70000000 INFO @ Wed, 08 Dec 2021 16:05:06: 66000000 INFO @ Wed, 08 Dec 2021 16:05:12: 71000000 INFO @ Wed, 08 Dec 2021 16:05:13: 67000000 INFO @ Wed, 08 Dec 2021 16:05:19: 72000000 INFO @ Wed, 08 Dec 2021 16:05:21: 68000000 INFO @ Wed, 08 Dec 2021 16:05:27: 73000000 INFO @ Wed, 08 Dec 2021 16:05:28: 69000000 INFO @ Wed, 08 Dec 2021 16:05:34: 74000000 INFO @ Wed, 08 Dec 2021 16:05:36: 70000000 INFO @ Wed, 08 Dec 2021 16:05:41: 75000000 INFO @ Wed, 08 Dec 2021 16:05:43: 71000000 INFO @ Wed, 08 Dec 2021 16:05:48: 76000000 INFO @ Wed, 08 Dec 2021 16:05:51: 72000000 INFO @ Wed, 08 Dec 2021 16:05:56: 77000000 INFO @ Wed, 08 Dec 2021 16:05:58: 73000000 INFO @ Wed, 08 Dec 2021 16:06:03: 78000000 INFO @ Wed, 08 Dec 2021 16:06:06: 74000000 INFO @ Wed, 08 Dec 2021 16:06:10: 79000000 INFO @ Wed, 08 Dec 2021 16:06:13: 75000000 INFO @ Wed, 08 Dec 2021 16:06:17: 80000000 INFO @ Wed, 08 Dec 2021 16:06:21: 76000000 INFO @ Wed, 08 Dec 2021 16:06:25: 81000000 INFO @ Wed, 08 Dec 2021 16:06:28: 77000000 INFO @ Wed, 08 Dec 2021 16:06:32: 82000000 INFO @ Wed, 08 Dec 2021 16:06:36: 78000000 INFO @ Wed, 08 Dec 2021 16:06:38: #1 tag size is determined as 74 bps INFO @ Wed, 08 Dec 2021 16:06:38: #1 tag size = 74 INFO @ Wed, 08 Dec 2021 16:06:38: #1 total tags in treatment: 41157186 INFO @ Wed, 08 Dec 2021 16:06:38: #1 user defined the maximum tags... INFO @ Wed, 08 Dec 2021 16:06:38: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Wed, 08 Dec 2021 16:06:39: #1 tags after filtering in treatment: 35709167 INFO @ Wed, 08 Dec 2021 16:06:39: #1 Redundant rate of treatment: 0.13 INFO @ Wed, 08 Dec 2021 16:06:39: #1 finished! INFO @ Wed, 08 Dec 2021 16:06:39: #2 Build Peak Model... INFO @ Wed, 08 Dec 2021 16:06:39: #2 looking for paired plus/minus strand peaks... INFO @ Wed, 08 Dec 2021 16:06:41: #2 number of paired peaks: 29 WARNING @ Wed, 08 Dec 2021 16:06:41: Too few paired peaks (29) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Wed, 08 Dec 2021 16:06:41: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce11/SRX8948257/SRX8948257.10_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 0 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX8948257/SRX8948257.10_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX8948257/SRX8948257.10_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX8948257/SRX8948257.10_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Wed, 08 Dec 2021 16:06:43: 79000000 INFO @ Wed, 08 Dec 2021 16:06:50: 80000000 INFO @ Wed, 08 Dec 2021 16:06:57: 81000000 INFO @ Wed, 08 Dec 2021 16:07:04: 82000000 INFO @ Wed, 08 Dec 2021 16:07:10: #1 tag size is determined as 74 bps INFO @ Wed, 08 Dec 2021 16:07:10: #1 tag size = 74 INFO @ Wed, 08 Dec 2021 16:07:10: #1 total tags in treatment: 41157186 INFO @ Wed, 08 Dec 2021 16:07:10: #1 user defined the maximum tags... INFO @ Wed, 08 Dec 2021 16:07:10: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Wed, 08 Dec 2021 16:07:11: #1 tags after filtering in treatment: 35709167 INFO @ Wed, 08 Dec 2021 16:07:11: #1 Redundant rate of treatment: 0.13 INFO @ Wed, 08 Dec 2021 16:07:11: #1 finished! INFO @ Wed, 08 Dec 2021 16:07:11: #2 Build Peak Model... INFO @ Wed, 08 Dec 2021 16:07:11: #2 looking for paired plus/minus strand peaks... INFO @ Wed, 08 Dec 2021 16:07:13: #2 number of paired peaks: 29 WARNING @ Wed, 08 Dec 2021 16:07:13: Too few paired peaks (29) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Wed, 08 Dec 2021 16:07:13: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce11/SRX8948257/SRX8948257.20_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 0 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX8948257/SRX8948257.20_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX8948257/SRX8948257.20_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX8948257/SRX8948257.20_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling