Job ID = 12265492 SRX = SRX7687150 Genome = ce11 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:48:40 29736773 reads; of these: 29736773 (100.00%) were paired; of these: 6139813 (20.65%) aligned concordantly 0 times 18989646 (63.86%) aligned concordantly exactly 1 time 4607314 (15.49%) aligned concordantly >1 times ---- 6139813 pairs aligned concordantly 0 times; of these: 4542011 (73.98%) aligned discordantly 1 time ---- 1597802 pairs aligned 0 times concordantly or discordantly; of these: 3195604 mates make up the pairs; of these: 1303663 (40.80%) aligned 0 times 691419 (21.64%) aligned exactly 1 time 1200522 (37.57%) aligned >1 times 97.81% overall alignment rate Time searching: 00:48:40 Overall time: 00:48:40 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 24 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 5860698 / 28107199 = 0.2085 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 08:23:02: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX7687150/SRX7687150.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX7687150/SRX7687150.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX7687150/SRX7687150.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX7687150/SRX7687150.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 08:23:02: #1 read tag files... INFO @ Sat, 03 Apr 2021 08:23:02: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 08:23:10: 1000000 INFO @ Sat, 03 Apr 2021 08:23:17: 2000000 INFO @ Sat, 03 Apr 2021 08:23:27: 3000000 WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 08:23:31: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX7687150/SRX7687150.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX7687150/SRX7687150.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX7687150/SRX7687150.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX7687150/SRX7687150.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 08:23:31: #1 read tag files... INFO @ Sat, 03 Apr 2021 08:23:31: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 08:23:34: 4000000 INFO @ Sat, 03 Apr 2021 08:23:39: 1000000 INFO @ Sat, 03 Apr 2021 08:23:43: 5000000 INFO @ Sat, 03 Apr 2021 08:23:47: 2000000 INFO @ Sat, 03 Apr 2021 08:23:51: 6000000 INFO @ Sat, 03 Apr 2021 08:23:56: 3000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 08:23:59: 7000000 INFO @ Sat, 03 Apr 2021 08:24:01: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX7687150/SRX7687150.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX7687150/SRX7687150.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX7687150/SRX7687150.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX7687150/SRX7687150.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 08:24:01: #1 read tag files... INFO @ Sat, 03 Apr 2021 08:24:01: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 08:24:04: 4000000 INFO @ Sat, 03 Apr 2021 08:24:08: 8000000 INFO @ Sat, 03 Apr 2021 08:24:11: 1000000 INFO @ Sat, 03 Apr 2021 08:24:14: 5000000 INFO @ Sat, 03 Apr 2021 08:24:17: 9000000 INFO @ Sat, 03 Apr 2021 08:24:20: 2000000 INFO @ Sat, 03 Apr 2021 08:24:23: 6000000 INFO @ Sat, 03 Apr 2021 08:24:26: 10000000 INFO @ Sat, 03 Apr 2021 08:24:30: 3000000 INFO @ Sat, 03 Apr 2021 08:24:32: 7000000 INFO @ Sat, 03 Apr 2021 08:24:35: 11000000 INFO @ Sat, 03 Apr 2021 08:24:39: 4000000 INFO @ Sat, 03 Apr 2021 08:24:42: 8000000 INFO @ Sat, 03 Apr 2021 08:24:44: 12000000 INFO @ Sat, 03 Apr 2021 08:24:48: 5000000 INFO @ Sat, 03 Apr 2021 08:24:52: 9000000 INFO @ Sat, 03 Apr 2021 08:24:53: 13000000 INFO @ Sat, 03 Apr 2021 08:24:58: 6000000 INFO @ Sat, 03 Apr 2021 08:25:01: 10000000 INFO @ Sat, 03 Apr 2021 08:25:02: 14000000 INFO @ Sat, 03 Apr 2021 08:25:07: 7000000 INFO @ Sat, 03 Apr 2021 08:25:11: 11000000 INFO @ Sat, 03 Apr 2021 08:25:11: 15000000 INFO @ Sat, 03 Apr 2021 08:25:17: 8000000 INFO @ Sat, 03 Apr 2021 08:25:20: 16000000 INFO @ Sat, 03 Apr 2021 08:25:20: 12000000 INFO @ Sat, 03 Apr 2021 08:25:26: 9000000 INFO @ Sat, 03 Apr 2021 08:25:28: 17000000 INFO @ Sat, 03 Apr 2021 08:25:30: 13000000 INFO @ Sat, 03 Apr 2021 08:25:36: 10000000 INFO @ Sat, 03 Apr 2021 08:25:37: 18000000 INFO @ Sat, 03 Apr 2021 08:25:39: 14000000 INFO @ Sat, 03 Apr 2021 08:25:45: 11000000 INFO @ Sat, 03 Apr 2021 08:25:45: 19000000 INFO @ Sat, 03 Apr 2021 08:25:49: 15000000 INFO @ Sat, 03 Apr 2021 08:25:54: 20000000 INFO @ Sat, 03 Apr 2021 08:25:54: 12000000 INFO @ Sat, 03 Apr 2021 08:25:58: 16000000 INFO @ Sat, 03 Apr 2021 08:26:03: 13000000 INFO @ Sat, 03 Apr 2021 08:26:03: 21000000 INFO @ Sat, 03 Apr 2021 08:26:09: 17000000 INFO @ Sat, 03 Apr 2021 08:26:11: 14000000 INFO @ Sat, 03 Apr 2021 08:26:13: 22000000 INFO @ Sat, 03 Apr 2021 08:26:20: 15000000 INFO @ Sat, 03 Apr 2021 08:26:20: 18000000 INFO @ Sat, 03 Apr 2021 08:26:22: 23000000 INFO @ Sat, 03 Apr 2021 08:26:28: 16000000 INFO @ Sat, 03 Apr 2021 08:26:31: 19000000 INFO @ Sat, 03 Apr 2021 08:26:31: 24000000 INFO @ Sat, 03 Apr 2021 08:26:37: 17000000 INFO @ Sat, 03 Apr 2021 08:26:39: 25000000 INFO @ Sat, 03 Apr 2021 08:26:41: 20000000 INFO @ Sat, 03 Apr 2021 08:26:47: 18000000 INFO @ Sat, 03 Apr 2021 08:26:48: 26000000 INFO @ Sat, 03 Apr 2021 08:26:51: 21000000 INFO @ Sat, 03 Apr 2021 08:26:56: 19000000 INFO @ Sat, 03 Apr 2021 08:26:56: 27000000 INFO @ Sat, 03 Apr 2021 08:27:00: 22000000 INFO @ Sat, 03 Apr 2021 08:27:04: 28000000 INFO @ Sat, 03 Apr 2021 08:27:06: 20000000 INFO @ Sat, 03 Apr 2021 08:27:11: 23000000 INFO @ Sat, 03 Apr 2021 08:27:13: 29000000 INFO @ Sat, 03 Apr 2021 08:27:15: 21000000 INFO @ Sat, 03 Apr 2021 08:27:21: 30000000 INFO @ Sat, 03 Apr 2021 08:27:21: 24000000 INFO @ Sat, 03 Apr 2021 08:27:24: 22000000 INFO @ Sat, 03 Apr 2021 08:27:29: 31000000 INFO @ Sat, 03 Apr 2021 08:27:31: 25000000 INFO @ Sat, 03 Apr 2021 08:27:34: 23000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sat, 03 Apr 2021 08:27:38: 32000000 INFO @ Sat, 03 Apr 2021 08:27:40: 26000000 INFO @ Sat, 03 Apr 2021 08:27:43: 24000000 INFO @ Sat, 03 Apr 2021 08:27:46: 33000000 INFO @ Sat, 03 Apr 2021 08:27:50: 27000000 INFO @ Sat, 03 Apr 2021 08:27:52: 25000000 INFO @ Sat, 03 Apr 2021 08:27:54: 34000000 INFO @ Sat, 03 Apr 2021 08:27:59: 28000000 INFO @ Sat, 03 Apr 2021 08:28:02: 26000000 INFO @ Sat, 03 Apr 2021 08:28:02: 35000000 INFO @ Sat, 03 Apr 2021 08:28:08: 29000000 INFO @ Sat, 03 Apr 2021 08:28:10: 36000000 INFO @ Sat, 03 Apr 2021 08:28:11: 27000000 INFO @ Sat, 03 Apr 2021 08:28:17: 30000000 INFO @ Sat, 03 Apr 2021 08:28:18: 37000000 INFO @ Sat, 03 Apr 2021 08:28:20: 28000000 INFO @ Sat, 03 Apr 2021 08:28:26: 31000000 INFO @ Sat, 03 Apr 2021 08:28:27: 38000000 INFO @ Sat, 03 Apr 2021 08:28:30: 29000000 INFO @ Sat, 03 Apr 2021 08:28:35: 39000000 INFO @ Sat, 03 Apr 2021 08:28:36: 32000000 INFO @ Sat, 03 Apr 2021 08:28:40: 30000000 INFO @ Sat, 03 Apr 2021 08:28:43: 40000000 INFO @ Sat, 03 Apr 2021 08:28:47: 33000000 BigWig に変換しました。 INFO @ Sat, 03 Apr 2021 08:28:51: 31000000 INFO @ Sat, 03 Apr 2021 08:28:52: 41000000 INFO @ Sat, 03 Apr 2021 08:28:57: 34000000 INFO @ Sat, 03 Apr 2021 08:29:01: 42000000 INFO @ Sat, 03 Apr 2021 08:29:01: 32000000 INFO @ Sat, 03 Apr 2021 08:29:08: 35000000 INFO @ Sat, 03 Apr 2021 08:29:11: 43000000 INFO @ Sat, 03 Apr 2021 08:29:11: 33000000 INFO @ Sat, 03 Apr 2021 08:29:19: 36000000 INFO @ Sat, 03 Apr 2021 08:29:22: 34000000 INFO @ Sat, 03 Apr 2021 08:29:22: 44000000 INFO @ Sat, 03 Apr 2021 08:29:29: 37000000 INFO @ Sat, 03 Apr 2021 08:29:33: 35000000 INFO @ Sat, 03 Apr 2021 08:29:33: 45000000 INFO @ Sat, 03 Apr 2021 08:29:40: 38000000 INFO @ Sat, 03 Apr 2021 08:29:44: 36000000 INFO @ Sat, 03 Apr 2021 08:29:45: 46000000 INFO @ Sat, 03 Apr 2021 08:29:50: #1 tag size is determined as 75 bps INFO @ Sat, 03 Apr 2021 08:29:50: #1 tag size = 75 INFO @ Sat, 03 Apr 2021 08:29:50: #1 total tags in treatment: 18373611 INFO @ Sat, 03 Apr 2021 08:29:50: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 08:29:50: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 08:29:51: #1 tags after filtering in treatment: 12989606 INFO @ Sat, 03 Apr 2021 08:29:51: #1 Redundant rate of treatment: 0.29 INFO @ Sat, 03 Apr 2021 08:29:51: #1 finished! INFO @ Sat, 03 Apr 2021 08:29:51: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 08:29:51: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 08:29:51: 39000000 INFO @ Sat, 03 Apr 2021 08:29:51: #2 number of paired peaks: 266 WARNING @ Sat, 03 Apr 2021 08:29:51: Fewer paired peaks (266) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 266 pairs to build model! INFO @ Sat, 03 Apr 2021 08:29:51: start model_add_line... INFO @ Sat, 03 Apr 2021 08:29:51: start X-correlation... INFO @ Sat, 03 Apr 2021 08:29:52: end of X-cor INFO @ Sat, 03 Apr 2021 08:29:52: #2 finished! INFO @ Sat, 03 Apr 2021 08:29:52: #2 predicted fragment length is 142 bps INFO @ Sat, 03 Apr 2021 08:29:52: #2 alternative fragment length(s) may be 4,115,136,142 bps INFO @ Sat, 03 Apr 2021 08:29:52: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX7687150/SRX7687150.05_model.r WARNING @ Sat, 03 Apr 2021 08:29:52: #2 Since the d (142) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 08:29:52: #2 You may need to consider one of the other alternative d(s): 4,115,136,142 WARNING @ Sat, 03 Apr 2021 08:29:52: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 08:29:52: #3 Call peaks... INFO @ Sat, 03 Apr 2021 08:29:52: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 08:29:55: 37000000 INFO @ Sat, 03 Apr 2021 08:30:01: 40000000 INFO @ Sat, 03 Apr 2021 08:30:05: 38000000 INFO @ Sat, 03 Apr 2021 08:30:12: 41000000 INFO @ Sat, 03 Apr 2021 08:30:15: 39000000 INFO @ Sat, 03 Apr 2021 08:30:17: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 08:30:22: 42000000 INFO @ Sat, 03 Apr 2021 08:30:25: 40000000 INFO @ Sat, 03 Apr 2021 08:30:30: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX7687150/SRX7687150.05_peaks.xls INFO @ Sat, 03 Apr 2021 08:30:30: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX7687150/SRX7687150.05_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 08:30:30: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX7687150/SRX7687150.05_summits.bed INFO @ Sat, 03 Apr 2021 08:30:30: Done! pass1 - making usageList (7 chroms): 1 millis pass2 - checking and writing primary data (492 records, 4 fields): 2 millis CompletedMACS2peakCalling INFO @ Sat, 03 Apr 2021 08:30:32: 43000000 INFO @ Sat, 03 Apr 2021 08:30:36: 41000000 INFO @ Sat, 03 Apr 2021 08:30:42: 44000000 INFO @ Sat, 03 Apr 2021 08:30:45: 42000000 INFO @ Sat, 03 Apr 2021 08:30:52: 45000000 INFO @ Sat, 03 Apr 2021 08:30:55: 43000000 INFO @ Sat, 03 Apr 2021 08:31:02: 46000000 INFO @ Sat, 03 Apr 2021 08:31:05: 44000000 INFO @ Sat, 03 Apr 2021 08:31:06: #1 tag size is determined as 75 bps INFO @ Sat, 03 Apr 2021 08:31:06: #1 tag size = 75 INFO @ Sat, 03 Apr 2021 08:31:06: #1 total tags in treatment: 18373611 INFO @ Sat, 03 Apr 2021 08:31:06: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 08:31:06: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 08:31:06: #1 tags after filtering in treatment: 12989606 INFO @ Sat, 03 Apr 2021 08:31:06: #1 Redundant rate of treatment: 0.29 INFO @ Sat, 03 Apr 2021 08:31:06: #1 finished! INFO @ Sat, 03 Apr 2021 08:31:06: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 08:31:06: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 08:31:07: #2 number of paired peaks: 266 WARNING @ Sat, 03 Apr 2021 08:31:07: Fewer paired peaks (266) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 266 pairs to build model! INFO @ Sat, 03 Apr 2021 08:31:07: start model_add_line... INFO @ Sat, 03 Apr 2021 08:31:07: start X-correlation... INFO @ Sat, 03 Apr 2021 08:31:07: end of X-cor INFO @ Sat, 03 Apr 2021 08:31:07: #2 finished! INFO @ Sat, 03 Apr 2021 08:31:07: #2 predicted fragment length is 142 bps INFO @ Sat, 03 Apr 2021 08:31:07: #2 alternative fragment length(s) may be 4,115,136,142 bps INFO @ Sat, 03 Apr 2021 08:31:07: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX7687150/SRX7687150.10_model.r WARNING @ Sat, 03 Apr 2021 08:31:07: #2 Since the d (142) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 08:31:07: #2 You may need to consider one of the other alternative d(s): 4,115,136,142 WARNING @ Sat, 03 Apr 2021 08:31:07: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 08:31:07: #3 Call peaks... INFO @ Sat, 03 Apr 2021 08:31:07: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 08:31:15: 45000000 INFO @ Sat, 03 Apr 2021 08:31:25: 46000000 INFO @ Sat, 03 Apr 2021 08:31:28: #1 tag size is determined as 75 bps INFO @ Sat, 03 Apr 2021 08:31:28: #1 tag size = 75 INFO @ Sat, 03 Apr 2021 08:31:28: #1 total tags in treatment: 18373611 INFO @ Sat, 03 Apr 2021 08:31:28: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 08:31:28: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 08:31:29: #1 tags after filtering in treatment: 12989606 INFO @ Sat, 03 Apr 2021 08:31:29: #1 Redundant rate of treatment: 0.29 INFO @ Sat, 03 Apr 2021 08:31:29: #1 finished! INFO @ Sat, 03 Apr 2021 08:31:29: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 08:31:29: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 08:31:30: #2 number of paired peaks: 266 WARNING @ Sat, 03 Apr 2021 08:31:30: Fewer paired peaks (266) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 266 pairs to build model! INFO @ Sat, 03 Apr 2021 08:31:30: start model_add_line... INFO @ Sat, 03 Apr 2021 08:31:30: start X-correlation... INFO @ Sat, 03 Apr 2021 08:31:30: end of X-cor INFO @ Sat, 03 Apr 2021 08:31:30: #2 finished! INFO @ Sat, 03 Apr 2021 08:31:30: #2 predicted fragment length is 142 bps INFO @ Sat, 03 Apr 2021 08:31:30: #2 alternative fragment length(s) may be 4,115,136,142 bps INFO @ Sat, 03 Apr 2021 08:31:30: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX7687150/SRX7687150.20_model.r WARNING @ Sat, 03 Apr 2021 08:31:30: #2 Since the d (142) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 08:31:30: #2 You may need to consider one of the other alternative d(s): 4,115,136,142 WARNING @ Sat, 03 Apr 2021 08:31:30: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 08:31:30: #3 Call peaks... INFO @ Sat, 03 Apr 2021 08:31:30: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 08:31:32: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 08:31:45: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX7687150/SRX7687150.10_peaks.xls INFO @ Sat, 03 Apr 2021 08:31:45: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX7687150/SRX7687150.10_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 08:31:45: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX7687150/SRX7687150.10_summits.bed INFO @ Sat, 03 Apr 2021 08:31:45: Done! pass1 - making usageList (7 chroms): 1 millis pass2 - checking and writing primary data (289 records, 4 fields): 2 millis CompletedMACS2peakCalling INFO @ Sat, 03 Apr 2021 08:31:54: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 08:32:07: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX7687150/SRX7687150.20_peaks.xls INFO @ Sat, 03 Apr 2021 08:32:07: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX7687150/SRX7687150.20_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 08:32:07: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX7687150/SRX7687150.20_summits.bed INFO @ Sat, 03 Apr 2021 08:32:07: Done! pass1 - making usageList (6 chroms): 1 millis pass2 - checking and writing primary data (151 records, 4 fields): 1 millis CompletedMACS2peakCalling