Job ID = 6367962 SRX = SRX4419830 Genome = ce11 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2020-06-15T23:49:18 prefetch.2.10.7: 1) Downloading 'SRR7553970'... 2020-06-15T23:49:18 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:56:07 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:56:07 prefetch.2.10.7: 1) 'SRR7553970' was downloaded successfully Read 22398645 spots for SRR7553970/SRR7553970.sra Written 22398645 spots for SRR7553970/SRR7553970.sra 2020-06-15T23:58:30 prefetch.2.10.7: 1) Downloading 'SRR7553971'... 2020-06-15T23:58:30 prefetch.2.10.7: Downloading via HTTPS... 2020-06-16T00:02:04 prefetch.2.10.7: HTTPS download succeed 2020-06-16T00:02:04 prefetch.2.10.7: 1) 'SRR7553971' was downloaded successfully Read 21180408 spots for SRR7553971/SRR7553971.sra Written 21180408 spots for SRR7553971/SRR7553971.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:42:13 43579053 reads; of these: 43579053 (100.00%) were paired; of these: 6748248 (15.49%) aligned concordantly 0 times 31260881 (71.73%) aligned concordantly exactly 1 time 5569924 (12.78%) aligned concordantly >1 times ---- 6748248 pairs aligned concordantly 0 times; of these: 1610656 (23.87%) aligned discordantly 1 time ---- 5137592 pairs aligned 0 times concordantly or discordantly; of these: 10275184 mates make up the pairs; of these: 8682595 (84.50%) aligned 0 times 985711 (9.59%) aligned exactly 1 time 606878 (5.91%) aligned >1 times 90.04% overall alignment rate Time searching: 00:42:13 Overall time: 00:42:13 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 32 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 2196807 / 37872021 = 0.0580 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 10:12:19: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX4419830/SRX4419830.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX4419830/SRX4419830.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX4419830/SRX4419830.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX4419830/SRX4419830.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 10:12:19: #1 read tag files... INFO @ Tue, 16 Jun 2020 10:12:19: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 10:12:25: 1000000 INFO @ Tue, 16 Jun 2020 10:12:30: 2000000 INFO @ Tue, 16 Jun 2020 10:12:35: 3000000 INFO @ Tue, 16 Jun 2020 10:12:40: 4000000 INFO @ Tue, 16 Jun 2020 10:12:46: 5000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 10:12:49: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX4419830/SRX4419830.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX4419830/SRX4419830.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX4419830/SRX4419830.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX4419830/SRX4419830.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 10:12:49: #1 read tag files... INFO @ Tue, 16 Jun 2020 10:12:49: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 10:12:51: 6000000 INFO @ Tue, 16 Jun 2020 10:12:55: 1000000 INFO @ Tue, 16 Jun 2020 10:12:57: 7000000 INFO @ Tue, 16 Jun 2020 10:13:01: 2000000 INFO @ Tue, 16 Jun 2020 10:13:02: 8000000 INFO @ Tue, 16 Jun 2020 10:13:06: 3000000 INFO @ Tue, 16 Jun 2020 10:13:08: 9000000 INFO @ Tue, 16 Jun 2020 10:13:12: 4000000 INFO @ Tue, 16 Jun 2020 10:13:13: 10000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 10:13:17: 5000000 INFO @ Tue, 16 Jun 2020 10:13:19: 11000000 INFO @ Tue, 16 Jun 2020 10:13:19: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX4419830/SRX4419830.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX4419830/SRX4419830.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX4419830/SRX4419830.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX4419830/SRX4419830.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 10:13:19: #1 read tag files... INFO @ Tue, 16 Jun 2020 10:13:19: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 10:13:23: 6000000 INFO @ Tue, 16 Jun 2020 10:13:24: 12000000 INFO @ Tue, 16 Jun 2020 10:13:25: 1000000 INFO @ Tue, 16 Jun 2020 10:13:29: 7000000 INFO @ Tue, 16 Jun 2020 10:13:30: 13000000 INFO @ Tue, 16 Jun 2020 10:13:30: 2000000 INFO @ Tue, 16 Jun 2020 10:13:35: 8000000 INFO @ Tue, 16 Jun 2020 10:13:35: 14000000 INFO @ Tue, 16 Jun 2020 10:13:35: 3000000 INFO @ Tue, 16 Jun 2020 10:13:40: 4000000 INFO @ Tue, 16 Jun 2020 10:13:41: 9000000 INFO @ Tue, 16 Jun 2020 10:13:41: 15000000 INFO @ Tue, 16 Jun 2020 10:13:45: 5000000 INFO @ Tue, 16 Jun 2020 10:13:46: 10000000 INFO @ Tue, 16 Jun 2020 10:13:47: 16000000 INFO @ Tue, 16 Jun 2020 10:13:50: 6000000 INFO @ Tue, 16 Jun 2020 10:13:52: 11000000 INFO @ Tue, 16 Jun 2020 10:13:53: 17000000 INFO @ Tue, 16 Jun 2020 10:13:55: 7000000 INFO @ Tue, 16 Jun 2020 10:13:58: 12000000 INFO @ Tue, 16 Jun 2020 10:13:58: 18000000 INFO @ Tue, 16 Jun 2020 10:14:00: 8000000 INFO @ Tue, 16 Jun 2020 10:14:03: 13000000 INFO @ Tue, 16 Jun 2020 10:14:04: 19000000 INFO @ Tue, 16 Jun 2020 10:14:05: 9000000 INFO @ Tue, 16 Jun 2020 10:14:09: 14000000 INFO @ Tue, 16 Jun 2020 10:14:09: 20000000 INFO @ Tue, 16 Jun 2020 10:14:10: 10000000 INFO @ Tue, 16 Jun 2020 10:14:15: 11000000 INFO @ Tue, 16 Jun 2020 10:14:15: 15000000 INFO @ Tue, 16 Jun 2020 10:14:15: 21000000 INFO @ Tue, 16 Jun 2020 10:14:19: 12000000 INFO @ Tue, 16 Jun 2020 10:14:21: 16000000 INFO @ Tue, 16 Jun 2020 10:14:21: 22000000 INFO @ Tue, 16 Jun 2020 10:14:24: 13000000 INFO @ Tue, 16 Jun 2020 10:14:27: 23000000 INFO @ Tue, 16 Jun 2020 10:14:27: 17000000 INFO @ Tue, 16 Jun 2020 10:14:29: 14000000 INFO @ Tue, 16 Jun 2020 10:14:32: 24000000 INFO @ Tue, 16 Jun 2020 10:14:32: 18000000 INFO @ Tue, 16 Jun 2020 10:14:34: 15000000 INFO @ Tue, 16 Jun 2020 10:14:38: 25000000 INFO @ Tue, 16 Jun 2020 10:14:38: 19000000 INFO @ Tue, 16 Jun 2020 10:14:40: 16000000 INFO @ Tue, 16 Jun 2020 10:14:44: 20000000 INFO @ Tue, 16 Jun 2020 10:14:44: 26000000 INFO @ Tue, 16 Jun 2020 10:14:45: 17000000 INFO @ Tue, 16 Jun 2020 10:14:50: 21000000 INFO @ Tue, 16 Jun 2020 10:14:50: 27000000 INFO @ Tue, 16 Jun 2020 10:14:51: 18000000 INFO @ Tue, 16 Jun 2020 10:14:56: 22000000 INFO @ Tue, 16 Jun 2020 10:14:56: 28000000 INFO @ Tue, 16 Jun 2020 10:14:56: 19000000 INFO @ Tue, 16 Jun 2020 10:15:01: 23000000 INFO @ Tue, 16 Jun 2020 10:15:02: 29000000 INFO @ Tue, 16 Jun 2020 10:15:02: 20000000 INFO @ Tue, 16 Jun 2020 10:15:07: 24000000 INFO @ Tue, 16 Jun 2020 10:15:08: 30000000 INFO @ Tue, 16 Jun 2020 10:15:08: 21000000 INFO @ Tue, 16 Jun 2020 10:15:13: 25000000 INFO @ Tue, 16 Jun 2020 10:15:13: 31000000 INFO @ Tue, 16 Jun 2020 10:15:14: 22000000 INFO @ Tue, 16 Jun 2020 10:15:19: 32000000 INFO @ Tue, 16 Jun 2020 10:15:19: 26000000 INFO @ Tue, 16 Jun 2020 10:15:19: 23000000 INFO @ Tue, 16 Jun 2020 10:15:25: 33000000 INFO @ Tue, 16 Jun 2020 10:15:25: 24000000 INFO @ Tue, 16 Jun 2020 10:15:25: 27000000 INFO @ Tue, 16 Jun 2020 10:15:31: 34000000 INFO @ Tue, 16 Jun 2020 10:15:31: 25000000 INFO @ Tue, 16 Jun 2020 10:15:31: 28000000 INFO @ Tue, 16 Jun 2020 10:15:37: 26000000 INFO @ Tue, 16 Jun 2020 10:15:37: 35000000 INFO @ Tue, 16 Jun 2020 10:15:38: 29000000 INFO @ Tue, 16 Jun 2020 10:15:42: 27000000 INFO @ Tue, 16 Jun 2020 10:15:43: 36000000 INFO @ Tue, 16 Jun 2020 10:15:44: 30000000 INFO @ Tue, 16 Jun 2020 10:15:47: 28000000 INFO @ Tue, 16 Jun 2020 10:15:49: 37000000 INFO @ Tue, 16 Jun 2020 10:15:50: 31000000 INFO @ Tue, 16 Jun 2020 10:15:52: 29000000 INFO @ Tue, 16 Jun 2020 10:15:55: 38000000 INFO @ Tue, 16 Jun 2020 10:15:56: 32000000 INFO @ Tue, 16 Jun 2020 10:15:57: 30000000 INFO @ Tue, 16 Jun 2020 10:16:01: 39000000 INFO @ Tue, 16 Jun 2020 10:16:03: 33000000 INFO @ Tue, 16 Jun 2020 10:16:03: 31000000 INFO @ Tue, 16 Jun 2020 10:16:07: 40000000 INFO @ Tue, 16 Jun 2020 10:16:08: 32000000 INFO @ Tue, 16 Jun 2020 10:16:09: 34000000 INFO @ Tue, 16 Jun 2020 10:16:13: 33000000 INFO @ Tue, 16 Jun 2020 10:16:13: 41000000 INFO @ Tue, 16 Jun 2020 10:16:15: 35000000 INFO @ Tue, 16 Jun 2020 10:16:18: 34000000 INFO @ Tue, 16 Jun 2020 10:16:20: 42000000 INFO @ Tue, 16 Jun 2020 10:16:21: 36000000 INFO @ Tue, 16 Jun 2020 10:16:24: 35000000 INFO @ Tue, 16 Jun 2020 10:16:26: 43000000 INFO @ Tue, 16 Jun 2020 10:16:27: 37000000 INFO @ Tue, 16 Jun 2020 10:16:29: 36000000 INFO @ Tue, 16 Jun 2020 10:16:32: 44000000 INFO @ Tue, 16 Jun 2020 10:16:33: 38000000 INFO @ Tue, 16 Jun 2020 10:16:34: 37000000 INFO @ Tue, 16 Jun 2020 10:16:38: 45000000 INFO @ Tue, 16 Jun 2020 10:16:39: 38000000 INFO @ Tue, 16 Jun 2020 10:16:39: 39000000 INFO @ Tue, 16 Jun 2020 10:16:44: 39000000 INFO @ Tue, 16 Jun 2020 10:16:44: 46000000 INFO @ Tue, 16 Jun 2020 10:16:45: 40000000 INFO @ Tue, 16 Jun 2020 10:16:48: 40000000 INFO @ Tue, 16 Jun 2020 10:16:50: 47000000 INFO @ Tue, 16 Jun 2020 10:16:51: 41000000 INFO @ Tue, 16 Jun 2020 10:16:53: 41000000 INFO @ Tue, 16 Jun 2020 10:16:56: 48000000 INFO @ Tue, 16 Jun 2020 10:16:57: 42000000 INFO @ Tue, 16 Jun 2020 10:16:58: 42000000 INFO @ Tue, 16 Jun 2020 10:17:01: 49000000 INFO @ Tue, 16 Jun 2020 10:17:03: 43000000 INFO @ Tue, 16 Jun 2020 10:17:03: 43000000 INFO @ Tue, 16 Jun 2020 10:17:07: 50000000 INFO @ Tue, 16 Jun 2020 10:17:08: 44000000 INFO @ Tue, 16 Jun 2020 10:17:09: 44000000 INFO @ Tue, 16 Jun 2020 10:17:12: 51000000 INFO @ Tue, 16 Jun 2020 10:17:13: 45000000 INFO @ Tue, 16 Jun 2020 10:17:15: 45000000 INFO @ Tue, 16 Jun 2020 10:17:18: 46000000 INFO @ Tue, 16 Jun 2020 10:17:18: 52000000 INFO @ Tue, 16 Jun 2020 10:17:21: 46000000 INFO @ Tue, 16 Jun 2020 10:17:22: 47000000 INFO @ Tue, 16 Jun 2020 10:17:24: 53000000 INFO @ Tue, 16 Jun 2020 10:17:26: 47000000 INFO @ Tue, 16 Jun 2020 10:17:27: 48000000 INFO @ Tue, 16 Jun 2020 10:17:30: 54000000 INFO @ Tue, 16 Jun 2020 10:17:32: 49000000 INFO @ Tue, 16 Jun 2020 10:17:32: 48000000 INFO @ Tue, 16 Jun 2020 10:17:35: 55000000 INFO @ Tue, 16 Jun 2020 10:17:37: 50000000 INFO @ Tue, 16 Jun 2020 10:17:38: 49000000 INFO @ Tue, 16 Jun 2020 10:17:41: 56000000 INFO @ Tue, 16 Jun 2020 10:17:41: 51000000 INFO @ Tue, 16 Jun 2020 10:17:44: 50000000 INFO @ Tue, 16 Jun 2020 10:17:46: 52000000 INFO @ Tue, 16 Jun 2020 10:17:47: 57000000 INFO @ Tue, 16 Jun 2020 10:17:50: 51000000 INFO @ Tue, 16 Jun 2020 10:17:51: 53000000 INFO @ Tue, 16 Jun 2020 10:17:52: 58000000 INFO @ Tue, 16 Jun 2020 10:17:55: 52000000 INFO @ Tue, 16 Jun 2020 10:17:56: 54000000 INFO @ Tue, 16 Jun 2020 10:17:58: 59000000 INFO @ Tue, 16 Jun 2020 10:18:01: 53000000 INFO @ Tue, 16 Jun 2020 10:18:01: 55000000 INFO @ Tue, 16 Jun 2020 10:18:04: 60000000 INFO @ Tue, 16 Jun 2020 10:18:07: 56000000 INFO @ Tue, 16 Jun 2020 10:18:07: 54000000 INFO @ Tue, 16 Jun 2020 10:18:09: 61000000 INFO @ Tue, 16 Jun 2020 10:18:12: 57000000 INFO @ Tue, 16 Jun 2020 10:18:13: 55000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 16 Jun 2020 10:18:15: 62000000 INFO @ Tue, 16 Jun 2020 10:18:17: 58000000 INFO @ Tue, 16 Jun 2020 10:18:19: 56000000 INFO @ Tue, 16 Jun 2020 10:18:21: 63000000 INFO @ Tue, 16 Jun 2020 10:18:23: 59000000 INFO @ Tue, 16 Jun 2020 10:18:25: 57000000 INFO @ Tue, 16 Jun 2020 10:18:27: 64000000 INFO @ Tue, 16 Jun 2020 10:18:28: 60000000 INFO @ Tue, 16 Jun 2020 10:18:31: 58000000 INFO @ Tue, 16 Jun 2020 10:18:33: 65000000 INFO @ Tue, 16 Jun 2020 10:18:33: 61000000 INFO @ Tue, 16 Jun 2020 10:18:37: 59000000 INFO @ Tue, 16 Jun 2020 10:18:38: 62000000 INFO @ Tue, 16 Jun 2020 10:18:39: 66000000 INFO @ Tue, 16 Jun 2020 10:18:43: 60000000 INFO @ Tue, 16 Jun 2020 10:18:44: 63000000 INFO @ Tue, 16 Jun 2020 10:18:45: 67000000 INFO @ Tue, 16 Jun 2020 10:18:49: 61000000 INFO @ Tue, 16 Jun 2020 10:18:49: 64000000 INFO @ Tue, 16 Jun 2020 10:18:51: 68000000 INFO @ Tue, 16 Jun 2020 10:18:55: 65000000 INFO @ Tue, 16 Jun 2020 10:18:55: 62000000 INFO @ Tue, 16 Jun 2020 10:18:58: 69000000 INFO @ Tue, 16 Jun 2020 10:19:00: 66000000 INFO @ Tue, 16 Jun 2020 10:19:02: 63000000 INFO @ Tue, 16 Jun 2020 10:19:04: 70000000 INFO @ Tue, 16 Jun 2020 10:19:06: 67000000 INFO @ Tue, 16 Jun 2020 10:19:08: 64000000 INFO @ Tue, 16 Jun 2020 10:19:10: 71000000 INFO @ Tue, 16 Jun 2020 10:19:11: 68000000 INFO @ Tue, 16 Jun 2020 10:19:14: 65000000 INFO @ Tue, 16 Jun 2020 10:19:17: 69000000 INFO @ Tue, 16 Jun 2020 10:19:17: 72000000 INFO @ Tue, 16 Jun 2020 10:19:21: 66000000 INFO @ Tue, 16 Jun 2020 10:19:22: 70000000 INFO @ Tue, 16 Jun 2020 10:19:23: 73000000 INFO @ Tue, 16 Jun 2020 10:19:27: 67000000 INFO @ Tue, 16 Jun 2020 10:19:28: 71000000 INFO @ Tue, 16 Jun 2020 10:19:30: 74000000 INFO @ Tue, 16 Jun 2020 10:19:31: #1 tag size is determined as 50 bps INFO @ Tue, 16 Jun 2020 10:19:31: #1 tag size = 50 INFO @ Tue, 16 Jun 2020 10:19:31: #1 total tags in treatment: 34645350 INFO @ Tue, 16 Jun 2020 10:19:31: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 10:19:31: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 10:19:31: #1 tags after filtering in treatment: 24999957 INFO @ Tue, 16 Jun 2020 10:19:31: #1 Redundant rate of treatment: 0.28 INFO @ Tue, 16 Jun 2020 10:19:31: #1 finished! INFO @ Tue, 16 Jun 2020 10:19:31: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 10:19:31: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 10:19:33: 72000000 INFO @ Tue, 16 Jun 2020 10:19:33: #2 number of paired peaks: 75 WARNING @ Tue, 16 Jun 2020 10:19:33: Too few paired peaks (75) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 16 Jun 2020 10:19:33: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce11/SRX4419830/SRX4419830.05_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 0 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4419830/SRX4419830.05_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4419830/SRX4419830.05_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4419830/SRX4419830.05_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Tue, 16 Jun 2020 10:19:34: 68000000 INFO @ Tue, 16 Jun 2020 10:19:38: 73000000 INFO @ Tue, 16 Jun 2020 10:19:40: 69000000 INFO @ Tue, 16 Jun 2020 10:19:44: 74000000 INFO @ Tue, 16 Jun 2020 10:19:45: #1 tag size is determined as 50 bps INFO @ Tue, 16 Jun 2020 10:19:45: #1 tag size = 50 INFO @ Tue, 16 Jun 2020 10:19:45: #1 total tags in treatment: 34645350 INFO @ Tue, 16 Jun 2020 10:19:45: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 10:19:45: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 10:19:45: #1 tags after filtering in treatment: 24999957 INFO @ Tue, 16 Jun 2020 10:19:45: #1 Redundant rate of treatment: 0.28 INFO @ Tue, 16 Jun 2020 10:19:45: #1 finished! INFO @ Tue, 16 Jun 2020 10:19:45: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 10:19:45: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 10:19:47: 70000000 INFO @ Tue, 16 Jun 2020 10:19:47: #2 number of paired peaks: 75 WARNING @ Tue, 16 Jun 2020 10:19:47: Too few paired peaks (75) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 16 Jun 2020 10:19:47: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce11/SRX4419830/SRX4419830.20_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4419830/SRX4419830.20_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4419830/SRX4419830.20_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4419830/SRX4419830.20_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling BigWig に変換しました。 INFO @ Tue, 16 Jun 2020 10:19:53: 71000000 INFO @ Tue, 16 Jun 2020 10:19:59: 72000000 INFO @ Tue, 16 Jun 2020 10:20:05: 73000000 INFO @ Tue, 16 Jun 2020 10:20:11: 74000000 INFO @ Tue, 16 Jun 2020 10:20:12: #1 tag size is determined as 50 bps INFO @ Tue, 16 Jun 2020 10:20:12: #1 tag size = 50 INFO @ Tue, 16 Jun 2020 10:20:12: #1 total tags in treatment: 34645350 INFO @ Tue, 16 Jun 2020 10:20:12: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 10:20:12: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 10:20:13: #1 tags after filtering in treatment: 24999957 INFO @ Tue, 16 Jun 2020 10:20:13: #1 Redundant rate of treatment: 0.28 INFO @ Tue, 16 Jun 2020 10:20:13: #1 finished! INFO @ Tue, 16 Jun 2020 10:20:13: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 10:20:13: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 10:20:15: #2 number of paired peaks: 75 WARNING @ Tue, 16 Jun 2020 10:20:15: Too few paired peaks (75) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 16 Jun 2020 10:20:15: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce11/SRX4419830/SRX4419830.10_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4419830/SRX4419830.10_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4419830/SRX4419830.10_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4419830/SRX4419830.10_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling