Job ID = 6367952 SRX = SRX4419818 Genome = ce11 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2020-06-15T23:42:03 prefetch.2.10.7: 1) Downloading 'SRR7553942'... 2020-06-15T23:42:03 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:45:05 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:45:05 prefetch.2.10.7: 'SRR7553942' is valid 2020-06-15T23:45:05 prefetch.2.10.7: 1) 'SRR7553942' was downloaded successfully Read 11373894 spots for SRR7553942/SRR7553942.sra Written 11373894 spots for SRR7553942/SRR7553942.sra 2020-06-15T23:46:14 prefetch.2.10.7: 1) Downloading 'SRR7553943'... 2020-06-15T23:46:14 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:52:53 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:52:53 prefetch.2.10.7: 1) 'SRR7553943' was downloaded successfully Read 12959611 spots for SRR7553943/SRR7553943.sra Written 12959611 spots for SRR7553943/SRR7553943.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:20:18 24333505 reads; of these: 24333505 (100.00%) were paired; of these: 3159215 (12.98%) aligned concordantly 0 times 17711207 (72.79%) aligned concordantly exactly 1 time 3463083 (14.23%) aligned concordantly >1 times ---- 3159215 pairs aligned concordantly 0 times; of these: 868397 (27.49%) aligned discordantly 1 time ---- 2290818 pairs aligned 0 times concordantly or discordantly; of these: 4581636 mates make up the pairs; of these: 3515428 (76.73%) aligned 0 times 650888 (14.21%) aligned exactly 1 time 415320 (9.06%) aligned >1 times 92.78% overall alignment rate Time searching: 00:20:18 Overall time: 00:20:18 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 20 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 770242 / 21974384 = 0.0351 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 09:24:20: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX4419818/SRX4419818.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX4419818/SRX4419818.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX4419818/SRX4419818.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX4419818/SRX4419818.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 09:24:20: #1 read tag files... INFO @ Tue, 16 Jun 2020 09:24:20: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 09:24:26: 1000000 INFO @ Tue, 16 Jun 2020 09:24:33: 2000000 INFO @ Tue, 16 Jun 2020 09:24:39: 3000000 INFO @ Tue, 16 Jun 2020 09:24:45: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 09:24:50: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX4419818/SRX4419818.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX4419818/SRX4419818.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX4419818/SRX4419818.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX4419818/SRX4419818.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 09:24:50: #1 read tag files... INFO @ Tue, 16 Jun 2020 09:24:50: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 09:24:52: 5000000 INFO @ Tue, 16 Jun 2020 09:24:56: 1000000 INFO @ Tue, 16 Jun 2020 09:24:59: 6000000 INFO @ Tue, 16 Jun 2020 09:25:03: 2000000 INFO @ Tue, 16 Jun 2020 09:25:05: 7000000 INFO @ Tue, 16 Jun 2020 09:25:09: 3000000 INFO @ Tue, 16 Jun 2020 09:25:11: 8000000 INFO @ Tue, 16 Jun 2020 09:25:15: 4000000 INFO @ Tue, 16 Jun 2020 09:25:17: 9000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 09:25:20: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX4419818/SRX4419818.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX4419818/SRX4419818.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX4419818/SRX4419818.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX4419818/SRX4419818.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 09:25:20: #1 read tag files... INFO @ Tue, 16 Jun 2020 09:25:20: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 09:25:21: 5000000 INFO @ Tue, 16 Jun 2020 09:25:23: 10000000 INFO @ Tue, 16 Jun 2020 09:25:26: 1000000 INFO @ Tue, 16 Jun 2020 09:25:28: 6000000 INFO @ Tue, 16 Jun 2020 09:25:30: 11000000 INFO @ Tue, 16 Jun 2020 09:25:31: 2000000 INFO @ Tue, 16 Jun 2020 09:25:34: 7000000 INFO @ Tue, 16 Jun 2020 09:25:36: 12000000 INFO @ Tue, 16 Jun 2020 09:25:37: 3000000 INFO @ Tue, 16 Jun 2020 09:25:41: 8000000 INFO @ Tue, 16 Jun 2020 09:25:43: 4000000 INFO @ Tue, 16 Jun 2020 09:25:43: 13000000 INFO @ Tue, 16 Jun 2020 09:25:47: 9000000 INFO @ Tue, 16 Jun 2020 09:25:48: 5000000 INFO @ Tue, 16 Jun 2020 09:25:49: 14000000 INFO @ Tue, 16 Jun 2020 09:25:54: 10000000 INFO @ Tue, 16 Jun 2020 09:25:54: 6000000 INFO @ Tue, 16 Jun 2020 09:25:56: 15000000 INFO @ Tue, 16 Jun 2020 09:26:00: 7000000 INFO @ Tue, 16 Jun 2020 09:26:00: 11000000 INFO @ Tue, 16 Jun 2020 09:26:02: 16000000 INFO @ Tue, 16 Jun 2020 09:26:05: 8000000 INFO @ Tue, 16 Jun 2020 09:26:07: 12000000 INFO @ Tue, 16 Jun 2020 09:26:09: 17000000 INFO @ Tue, 16 Jun 2020 09:26:11: 9000000 INFO @ Tue, 16 Jun 2020 09:26:14: 13000000 INFO @ Tue, 16 Jun 2020 09:26:15: 18000000 INFO @ Tue, 16 Jun 2020 09:26:16: 10000000 INFO @ Tue, 16 Jun 2020 09:26:20: 14000000 INFO @ Tue, 16 Jun 2020 09:26:22: 19000000 INFO @ Tue, 16 Jun 2020 09:26:22: 11000000 INFO @ Tue, 16 Jun 2020 09:26:26: 15000000 INFO @ Tue, 16 Jun 2020 09:26:27: 12000000 INFO @ Tue, 16 Jun 2020 09:26:28: 20000000 INFO @ Tue, 16 Jun 2020 09:26:33: 16000000 INFO @ Tue, 16 Jun 2020 09:26:33: 13000000 INFO @ Tue, 16 Jun 2020 09:26:34: 21000000 INFO @ Tue, 16 Jun 2020 09:26:39: 14000000 INFO @ Tue, 16 Jun 2020 09:26:39: 17000000 INFO @ Tue, 16 Jun 2020 09:26:40: 22000000 INFO @ Tue, 16 Jun 2020 09:26:44: 15000000 INFO @ Tue, 16 Jun 2020 09:26:46: 18000000 INFO @ Tue, 16 Jun 2020 09:26:47: 23000000 INFO @ Tue, 16 Jun 2020 09:26:50: 16000000 INFO @ Tue, 16 Jun 2020 09:26:52: 19000000 INFO @ Tue, 16 Jun 2020 09:26:53: 24000000 INFO @ Tue, 16 Jun 2020 09:26:55: 17000000 INFO @ Tue, 16 Jun 2020 09:26:59: 20000000 INFO @ Tue, 16 Jun 2020 09:27:00: 25000000 INFO @ Tue, 16 Jun 2020 09:27:01: 18000000 INFO @ Tue, 16 Jun 2020 09:27:05: 21000000 INFO @ Tue, 16 Jun 2020 09:27:06: 26000000 INFO @ Tue, 16 Jun 2020 09:27:07: 19000000 INFO @ Tue, 16 Jun 2020 09:27:12: 22000000 INFO @ Tue, 16 Jun 2020 09:27:12: 20000000 INFO @ Tue, 16 Jun 2020 09:27:13: 27000000 INFO @ Tue, 16 Jun 2020 09:27:18: 21000000 INFO @ Tue, 16 Jun 2020 09:27:19: 23000000 INFO @ Tue, 16 Jun 2020 09:27:19: 28000000 INFO @ Tue, 16 Jun 2020 09:27:23: 22000000 INFO @ Tue, 16 Jun 2020 09:27:25: 24000000 INFO @ Tue, 16 Jun 2020 09:27:25: 29000000 INFO @ Tue, 16 Jun 2020 09:27:29: 23000000 INFO @ Tue, 16 Jun 2020 09:27:32: 25000000 INFO @ Tue, 16 Jun 2020 09:27:32: 30000000 INFO @ Tue, 16 Jun 2020 09:27:35: 24000000 INFO @ Tue, 16 Jun 2020 09:27:38: 31000000 INFO @ Tue, 16 Jun 2020 09:27:38: 26000000 INFO @ Tue, 16 Jun 2020 09:27:40: 25000000 INFO @ Tue, 16 Jun 2020 09:27:45: 32000000 INFO @ Tue, 16 Jun 2020 09:27:45: 27000000 INFO @ Tue, 16 Jun 2020 09:27:46: 26000000 INFO @ Tue, 16 Jun 2020 09:27:51: 33000000 INFO @ Tue, 16 Jun 2020 09:27:52: 28000000 INFO @ Tue, 16 Jun 2020 09:27:52: 27000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 16 Jun 2020 09:27:58: 28000000 INFO @ Tue, 16 Jun 2020 09:27:58: 34000000 INFO @ Tue, 16 Jun 2020 09:27:59: 29000000 INFO @ Tue, 16 Jun 2020 09:28:03: 29000000 INFO @ Tue, 16 Jun 2020 09:28:04: 35000000 INFO @ Tue, 16 Jun 2020 09:28:05: 30000000 INFO @ Tue, 16 Jun 2020 09:28:09: 30000000 INFO @ Tue, 16 Jun 2020 09:28:11: 36000000 INFO @ Tue, 16 Jun 2020 09:28:12: 31000000 INFO @ Tue, 16 Jun 2020 09:28:15: 31000000 INFO @ Tue, 16 Jun 2020 09:28:18: 37000000 INFO @ Tue, 16 Jun 2020 09:28:18: 32000000 INFO @ Tue, 16 Jun 2020 09:28:21: 32000000 INFO @ Tue, 16 Jun 2020 09:28:24: 38000000 INFO @ Tue, 16 Jun 2020 09:28:25: 33000000 INFO @ Tue, 16 Jun 2020 09:28:27: 33000000 INFO @ Tue, 16 Jun 2020 09:28:31: 39000000 INFO @ Tue, 16 Jun 2020 09:28:32: 34000000 INFO @ Tue, 16 Jun 2020 09:28:32: 34000000 INFO @ Tue, 16 Jun 2020 09:28:37: 40000000 INFO @ Tue, 16 Jun 2020 09:28:38: 35000000 INFO @ Tue, 16 Jun 2020 09:28:39: 35000000 INFO @ Tue, 16 Jun 2020 09:28:44: 41000000 INFO @ Tue, 16 Jun 2020 09:28:45: 36000000 INFO @ Tue, 16 Jun 2020 09:28:46: 36000000 INFO @ Tue, 16 Jun 2020 09:28:50: 42000000 INFO @ Tue, 16 Jun 2020 09:28:52: 37000000 BigWig に変換しました。 INFO @ Tue, 16 Jun 2020 09:28:53: 37000000 INFO @ Tue, 16 Jun 2020 09:28:57: 43000000 INFO @ Tue, 16 Jun 2020 09:28:59: 38000000 INFO @ Tue, 16 Jun 2020 09:29:00: 38000000 INFO @ Tue, 16 Jun 2020 09:29:01: #1 tag size is determined as 50 bps INFO @ Tue, 16 Jun 2020 09:29:01: #1 tag size = 50 INFO @ Tue, 16 Jun 2020 09:29:01: #1 total tags in treatment: 20408770 INFO @ Tue, 16 Jun 2020 09:29:01: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 09:29:01: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 09:29:01: #1 tags after filtering in treatment: 16514561 INFO @ Tue, 16 Jun 2020 09:29:01: #1 Redundant rate of treatment: 0.19 INFO @ Tue, 16 Jun 2020 09:29:01: #1 finished! INFO @ Tue, 16 Jun 2020 09:29:01: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 09:29:01: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 09:29:03: #2 number of paired peaks: 191 WARNING @ Tue, 16 Jun 2020 09:29:03: Fewer paired peaks (191) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 191 pairs to build model! INFO @ Tue, 16 Jun 2020 09:29:03: start model_add_line... INFO @ Tue, 16 Jun 2020 09:29:03: start X-correlation... INFO @ Tue, 16 Jun 2020 09:29:03: end of X-cor INFO @ Tue, 16 Jun 2020 09:29:03: #2 finished! INFO @ Tue, 16 Jun 2020 09:29:03: #2 predicted fragment length is 108 bps INFO @ Tue, 16 Jun 2020 09:29:03: #2 alternative fragment length(s) may be 3,77,108,157,172 bps INFO @ Tue, 16 Jun 2020 09:29:03: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX4419818/SRX4419818.05_model.r INFO @ Tue, 16 Jun 2020 09:29:03: #3 Call peaks... INFO @ Tue, 16 Jun 2020 09:29:03: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 16 Jun 2020 09:29:05: 39000000 INFO @ Tue, 16 Jun 2020 09:29:06: 39000000 INFO @ Tue, 16 Jun 2020 09:29:12: 40000000 INFO @ Tue, 16 Jun 2020 09:29:13: 40000000 INFO @ Tue, 16 Jun 2020 09:29:19: 41000000 INFO @ Tue, 16 Jun 2020 09:29:19: 41000000 INFO @ Tue, 16 Jun 2020 09:29:25: 42000000 INFO @ Tue, 16 Jun 2020 09:29:26: 42000000 INFO @ Tue, 16 Jun 2020 09:29:32: 43000000 INFO @ Tue, 16 Jun 2020 09:29:33: 43000000 INFO @ Tue, 16 Jun 2020 09:29:33: #3 Call peaks for each chromosome... INFO @ Tue, 16 Jun 2020 09:29:36: #1 tag size is determined as 50 bps INFO @ Tue, 16 Jun 2020 09:29:36: #1 tag size = 50 INFO @ Tue, 16 Jun 2020 09:29:36: #1 total tags in treatment: 20408770 INFO @ Tue, 16 Jun 2020 09:29:36: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 09:29:36: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 09:29:36: #1 tags after filtering in treatment: 16514561 INFO @ Tue, 16 Jun 2020 09:29:36: #1 Redundant rate of treatment: 0.19 INFO @ Tue, 16 Jun 2020 09:29:36: #1 finished! INFO @ Tue, 16 Jun 2020 09:29:36: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 09:29:36: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 09:29:37: #1 tag size is determined as 50 bps INFO @ Tue, 16 Jun 2020 09:29:37: #1 tag size = 50 INFO @ Tue, 16 Jun 2020 09:29:37: #1 total tags in treatment: 20408770 INFO @ Tue, 16 Jun 2020 09:29:37: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 09:29:37: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 09:29:37: #1 tags after filtering in treatment: 16514561 INFO @ Tue, 16 Jun 2020 09:29:37: #1 Redundant rate of treatment: 0.19 INFO @ Tue, 16 Jun 2020 09:29:37: #1 finished! INFO @ Tue, 16 Jun 2020 09:29:37: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 09:29:37: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 09:29:37: #2 number of paired peaks: 191 WARNING @ Tue, 16 Jun 2020 09:29:37: Fewer paired peaks (191) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 191 pairs to build model! INFO @ Tue, 16 Jun 2020 09:29:37: start model_add_line... INFO @ Tue, 16 Jun 2020 09:29:37: start X-correlation... INFO @ Tue, 16 Jun 2020 09:29:37: end of X-cor INFO @ Tue, 16 Jun 2020 09:29:37: #2 finished! INFO @ Tue, 16 Jun 2020 09:29:37: #2 predicted fragment length is 108 bps INFO @ Tue, 16 Jun 2020 09:29:37: #2 alternative fragment length(s) may be 3,77,108,157,172 bps INFO @ Tue, 16 Jun 2020 09:29:37: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX4419818/SRX4419818.10_model.r INFO @ Tue, 16 Jun 2020 09:29:37: #3 Call peaks... INFO @ Tue, 16 Jun 2020 09:29:37: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 16 Jun 2020 09:29:38: #2 number of paired peaks: 191 WARNING @ Tue, 16 Jun 2020 09:29:38: Fewer paired peaks (191) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 191 pairs to build model! INFO @ Tue, 16 Jun 2020 09:29:38: start model_add_line... INFO @ Tue, 16 Jun 2020 09:29:38: start X-correlation... INFO @ Tue, 16 Jun 2020 09:29:38: end of X-cor INFO @ Tue, 16 Jun 2020 09:29:38: #2 finished! INFO @ Tue, 16 Jun 2020 09:29:38: #2 predicted fragment length is 108 bps INFO @ Tue, 16 Jun 2020 09:29:38: #2 alternative fragment length(s) may be 3,77,108,157,172 bps INFO @ Tue, 16 Jun 2020 09:29:38: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX4419818/SRX4419818.20_model.r INFO @ Tue, 16 Jun 2020 09:29:38: #3 Call peaks... INFO @ Tue, 16 Jun 2020 09:29:38: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 16 Jun 2020 09:29:47: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX4419818/SRX4419818.05_peaks.xls INFO @ Tue, 16 Jun 2020 09:29:47: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX4419818/SRX4419818.05_peaks.narrowPeak INFO @ Tue, 16 Jun 2020 09:29:47: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX4419818/SRX4419818.05_summits.bed INFO @ Tue, 16 Jun 2020 09:29:47: Done! pass1 - making usageList (6 chroms): 0 millis pass2 - checking and writing primary data (429 records, 4 fields): 2 millis CompletedMACS2peakCalling INFO @ Tue, 16 Jun 2020 09:30:06: #3 Call peaks for each chromosome... INFO @ Tue, 16 Jun 2020 09:30:07: #3 Call peaks for each chromosome... INFO @ Tue, 16 Jun 2020 09:30:20: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX4419818/SRX4419818.10_peaks.xls INFO @ Tue, 16 Jun 2020 09:30:20: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX4419818/SRX4419818.10_peaks.narrowPeak INFO @ Tue, 16 Jun 2020 09:30:20: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX4419818/SRX4419818.10_summits.bed INFO @ Tue, 16 Jun 2020 09:30:20: Done! pass1 - making usageList (6 chroms): 0 millis pass2 - checking and writing primary data (224 records, 4 fields): 1 millis CompletedMACS2peakCalling INFO @ Tue, 16 Jun 2020 09:30:21: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX4419818/SRX4419818.20_peaks.xls INFO @ Tue, 16 Jun 2020 09:30:21: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX4419818/SRX4419818.20_peaks.narrowPeak INFO @ Tue, 16 Jun 2020 09:30:21: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX4419818/SRX4419818.20_summits.bed INFO @ Tue, 16 Jun 2020 09:30:21: Done! pass1 - making usageList (6 chroms): 0 millis pass2 - checking and writing primary data (141 records, 4 fields): 1 millis CompletedMACS2peakCalling