Job ID = 6367951 SRX = SRX4419817 Genome = ce11 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2020-06-15T23:58:54 prefetch.2.10.7: 1) Downloading 'SRR7553940'... 2020-06-15T23:58:54 prefetch.2.10.7: Downloading via HTTPS... 2020-06-16T00:00:54 prefetch.2.10.7: HTTPS download succeed 2020-06-16T00:00:55 prefetch.2.10.7: 'SRR7553940' is valid 2020-06-16T00:00:55 prefetch.2.10.7: 1) 'SRR7553940' was downloaded successfully Read 12396890 spots for SRR7553940/SRR7553940.sra Written 12396890 spots for SRR7553940/SRR7553940.sra 2020-06-16T00:02:16 prefetch.2.10.7: 1) Downloading 'SRR7553941'... 2020-06-16T00:02:16 prefetch.2.10.7: Downloading via HTTPS... 2020-06-16T00:03:28 prefetch.2.10.7: HTTPS download succeed 2020-06-16T00:03:29 prefetch.2.10.7: 'SRR7553941' is valid 2020-06-16T00:03:29 prefetch.2.10.7: 1) 'SRR7553941' was downloaded successfully Read 11378854 spots for SRR7553941/SRR7553941.sra Written 11378854 spots for SRR7553941/SRR7553941.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:20:32 23775744 reads; of these: 23775744 (100.00%) were paired; of these: 2912340 (12.25%) aligned concordantly 0 times 17575303 (73.92%) aligned concordantly exactly 1 time 3288101 (13.83%) aligned concordantly >1 times ---- 2912340 pairs aligned concordantly 0 times; of these: 641573 (22.03%) aligned discordantly 1 time ---- 2270767 pairs aligned 0 times concordantly or discordantly; of these: 4541534 mates make up the pairs; of these: 3586581 (78.97%) aligned 0 times 632270 (13.92%) aligned exactly 1 time 322683 (7.11%) aligned >1 times 92.46% overall alignment rate Time searching: 00:20:32 Overall time: 00:20:32 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 20 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 881612 / 21287003 = 0.0414 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 09:35:09: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX4419817/SRX4419817.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX4419817/SRX4419817.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX4419817/SRX4419817.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX4419817/SRX4419817.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 09:35:09: #1 read tag files... INFO @ Tue, 16 Jun 2020 09:35:09: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 09:35:14: 1000000 INFO @ Tue, 16 Jun 2020 09:35:19: 2000000 INFO @ Tue, 16 Jun 2020 09:35:23: 3000000 INFO @ Tue, 16 Jun 2020 09:35:28: 4000000 INFO @ Tue, 16 Jun 2020 09:35:33: 5000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 09:35:38: 6000000 INFO @ Tue, 16 Jun 2020 09:35:39: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX4419817/SRX4419817.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX4419817/SRX4419817.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX4419817/SRX4419817.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX4419817/SRX4419817.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 09:35:39: #1 read tag files... INFO @ Tue, 16 Jun 2020 09:35:39: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 09:35:43: 7000000 INFO @ Tue, 16 Jun 2020 09:35:44: 1000000 INFO @ Tue, 16 Jun 2020 09:35:48: 8000000 INFO @ Tue, 16 Jun 2020 09:35:49: 2000000 INFO @ Tue, 16 Jun 2020 09:35:53: 9000000 INFO @ Tue, 16 Jun 2020 09:35:54: 3000000 INFO @ Tue, 16 Jun 2020 09:35:58: 10000000 INFO @ Tue, 16 Jun 2020 09:36:00: 4000000 INFO @ Tue, 16 Jun 2020 09:36:03: 11000000 INFO @ Tue, 16 Jun 2020 09:36:05: 5000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 09:36:09: 12000000 INFO @ Tue, 16 Jun 2020 09:36:09: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX4419817/SRX4419817.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX4419817/SRX4419817.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX4419817/SRX4419817.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX4419817/SRX4419817.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 09:36:09: #1 read tag files... INFO @ Tue, 16 Jun 2020 09:36:09: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 09:36:10: 6000000 INFO @ Tue, 16 Jun 2020 09:36:14: 13000000 INFO @ Tue, 16 Jun 2020 09:36:14: 1000000 INFO @ Tue, 16 Jun 2020 09:36:16: 7000000 INFO @ Tue, 16 Jun 2020 09:36:20: 14000000 INFO @ Tue, 16 Jun 2020 09:36:20: 2000000 INFO @ Tue, 16 Jun 2020 09:36:21: 8000000 INFO @ Tue, 16 Jun 2020 09:36:25: 15000000 INFO @ Tue, 16 Jun 2020 09:36:25: 3000000 INFO @ Tue, 16 Jun 2020 09:36:27: 9000000 INFO @ Tue, 16 Jun 2020 09:36:31: 16000000 INFO @ Tue, 16 Jun 2020 09:36:31: 4000000 INFO @ Tue, 16 Jun 2020 09:36:32: 10000000 INFO @ Tue, 16 Jun 2020 09:36:36: 17000000 INFO @ Tue, 16 Jun 2020 09:36:36: 5000000 INFO @ Tue, 16 Jun 2020 09:36:38: 11000000 INFO @ Tue, 16 Jun 2020 09:36:42: 18000000 INFO @ Tue, 16 Jun 2020 09:36:42: 6000000 INFO @ Tue, 16 Jun 2020 09:36:43: 12000000 INFO @ Tue, 16 Jun 2020 09:36:47: 19000000 INFO @ Tue, 16 Jun 2020 09:36:47: 7000000 INFO @ Tue, 16 Jun 2020 09:36:49: 13000000 INFO @ Tue, 16 Jun 2020 09:36:53: 20000000 INFO @ Tue, 16 Jun 2020 09:36:53: 8000000 INFO @ Tue, 16 Jun 2020 09:36:54: 14000000 INFO @ Tue, 16 Jun 2020 09:36:59: 21000000 INFO @ Tue, 16 Jun 2020 09:36:59: 9000000 INFO @ Tue, 16 Jun 2020 09:37:00: 15000000 INFO @ Tue, 16 Jun 2020 09:37:04: 22000000 INFO @ Tue, 16 Jun 2020 09:37:04: 10000000 INFO @ Tue, 16 Jun 2020 09:37:06: 16000000 INFO @ Tue, 16 Jun 2020 09:37:10: 11000000 INFO @ Tue, 16 Jun 2020 09:37:10: 23000000 INFO @ Tue, 16 Jun 2020 09:37:11: 17000000 INFO @ Tue, 16 Jun 2020 09:37:15: 12000000 INFO @ Tue, 16 Jun 2020 09:37:15: 24000000 INFO @ Tue, 16 Jun 2020 09:37:17: 18000000 INFO @ Tue, 16 Jun 2020 09:37:21: 13000000 INFO @ Tue, 16 Jun 2020 09:37:21: 25000000 INFO @ Tue, 16 Jun 2020 09:37:22: 19000000 INFO @ Tue, 16 Jun 2020 09:37:27: 14000000 INFO @ Tue, 16 Jun 2020 09:37:27: 26000000 INFO @ Tue, 16 Jun 2020 09:37:28: 20000000 INFO @ Tue, 16 Jun 2020 09:37:32: 15000000 INFO @ Tue, 16 Jun 2020 09:37:32: 27000000 INFO @ Tue, 16 Jun 2020 09:37:34: 21000000 INFO @ Tue, 16 Jun 2020 09:37:38: 16000000 INFO @ Tue, 16 Jun 2020 09:37:38: 28000000 INFO @ Tue, 16 Jun 2020 09:37:39: 22000000 INFO @ Tue, 16 Jun 2020 09:37:44: 17000000 INFO @ Tue, 16 Jun 2020 09:37:44: 29000000 INFO @ Tue, 16 Jun 2020 09:37:45: 23000000 INFO @ Tue, 16 Jun 2020 09:37:49: 18000000 INFO @ Tue, 16 Jun 2020 09:37:49: 30000000 INFO @ Tue, 16 Jun 2020 09:37:51: 24000000 INFO @ Tue, 16 Jun 2020 09:37:55: 19000000 INFO @ Tue, 16 Jun 2020 09:37:55: 31000000 INFO @ Tue, 16 Jun 2020 09:37:56: 25000000 INFO @ Tue, 16 Jun 2020 09:38:01: 20000000 INFO @ Tue, 16 Jun 2020 09:38:01: 32000000 INFO @ Tue, 16 Jun 2020 09:38:02: 26000000 INFO @ Tue, 16 Jun 2020 09:38:06: 21000000 INFO @ Tue, 16 Jun 2020 09:38:07: 33000000 INFO @ Tue, 16 Jun 2020 09:38:08: 27000000 INFO @ Tue, 16 Jun 2020 09:38:12: 22000000 INFO @ Tue, 16 Jun 2020 09:38:12: 34000000 INFO @ Tue, 16 Jun 2020 09:38:13: 28000000 INFO @ Tue, 16 Jun 2020 09:38:18: 23000000 INFO @ Tue, 16 Jun 2020 09:38:18: 35000000 INFO @ Tue, 16 Jun 2020 09:38:19: 29000000 INFO @ Tue, 16 Jun 2020 09:38:23: 24000000 INFO @ Tue, 16 Jun 2020 09:38:24: 36000000 INFO @ Tue, 16 Jun 2020 09:38:25: 30000000 INFO @ Tue, 16 Jun 2020 09:38:29: 25000000 INFO @ Tue, 16 Jun 2020 09:38:29: 37000000 INFO @ Tue, 16 Jun 2020 09:38:30: 31000000 INFO @ Tue, 16 Jun 2020 09:38:35: 26000000 INFO @ Tue, 16 Jun 2020 09:38:35: 38000000 INFO @ Tue, 16 Jun 2020 09:38:36: 32000000 INFO @ Tue, 16 Jun 2020 09:38:41: 27000000 INFO @ Tue, 16 Jun 2020 09:38:41: 39000000 INFO @ Tue, 16 Jun 2020 09:38:41: 33000000 INFO @ Tue, 16 Jun 2020 09:38:46: 28000000 INFO @ Tue, 16 Jun 2020 09:38:47: 40000000 INFO @ Tue, 16 Jun 2020 09:38:47: 34000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 16 Jun 2020 09:38:52: 29000000 INFO @ Tue, 16 Jun 2020 09:38:52: 41000000 INFO @ Tue, 16 Jun 2020 09:38:53: 35000000 INFO @ Tue, 16 Jun 2020 09:38:58: 30000000 INFO @ Tue, 16 Jun 2020 09:38:58: 42000000 INFO @ Tue, 16 Jun 2020 09:38:59: 36000000 INFO @ Tue, 16 Jun 2020 09:38:59: #1 tag size is determined as 50 bps INFO @ Tue, 16 Jun 2020 09:38:59: #1 tag size = 50 INFO @ Tue, 16 Jun 2020 09:38:59: #1 total tags in treatment: 19984685 INFO @ Tue, 16 Jun 2020 09:38:59: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 09:38:59: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 09:39:00: #1 tags after filtering in treatment: 16308420 INFO @ Tue, 16 Jun 2020 09:39:00: #1 Redundant rate of treatment: 0.18 INFO @ Tue, 16 Jun 2020 09:39:00: #1 finished! INFO @ Tue, 16 Jun 2020 09:39:00: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 09:39:00: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 09:39:01: #2 number of paired peaks: 171 WARNING @ Tue, 16 Jun 2020 09:39:01: Fewer paired peaks (171) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 171 pairs to build model! INFO @ Tue, 16 Jun 2020 09:39:01: start model_add_line... INFO @ Tue, 16 Jun 2020 09:39:01: start X-correlation... INFO @ Tue, 16 Jun 2020 09:39:01: end of X-cor INFO @ Tue, 16 Jun 2020 09:39:01: #2 finished! INFO @ Tue, 16 Jun 2020 09:39:01: #2 predicted fragment length is 140 bps INFO @ Tue, 16 Jun 2020 09:39:01: #2 alternative fragment length(s) may be 3,67,83,140,159 bps INFO @ Tue, 16 Jun 2020 09:39:01: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX4419817/SRX4419817.05_model.r INFO @ Tue, 16 Jun 2020 09:39:01: #3 Call peaks... INFO @ Tue, 16 Jun 2020 09:39:01: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 16 Jun 2020 09:39:03: 31000000 INFO @ Tue, 16 Jun 2020 09:39:04: 37000000 INFO @ Tue, 16 Jun 2020 09:39:09: 32000000 INFO @ Tue, 16 Jun 2020 09:39:10: 38000000 INFO @ Tue, 16 Jun 2020 09:39:14: 33000000 INFO @ Tue, 16 Jun 2020 09:39:16: 39000000 INFO @ Tue, 16 Jun 2020 09:39:20: 34000000 INFO @ Tue, 16 Jun 2020 09:39:22: 40000000 INFO @ Tue, 16 Jun 2020 09:39:26: 35000000 INFO @ Tue, 16 Jun 2020 09:39:27: 41000000 INFO @ Tue, 16 Jun 2020 09:39:31: 36000000 INFO @ Tue, 16 Jun 2020 09:39:32: #3 Call peaks for each chromosome... INFO @ Tue, 16 Jun 2020 09:39:33: 42000000 INFO @ Tue, 16 Jun 2020 09:39:34: #1 tag size is determined as 50 bps INFO @ Tue, 16 Jun 2020 09:39:34: #1 tag size = 50 INFO @ Tue, 16 Jun 2020 09:39:34: #1 total tags in treatment: 19984685 INFO @ Tue, 16 Jun 2020 09:39:34: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 09:39:34: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 09:39:35: #1 tags after filtering in treatment: 16308420 INFO @ Tue, 16 Jun 2020 09:39:35: #1 Redundant rate of treatment: 0.18 INFO @ Tue, 16 Jun 2020 09:39:35: #1 finished! INFO @ Tue, 16 Jun 2020 09:39:35: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 09:39:35: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 09:39:36: #2 number of paired peaks: 171 WARNING @ Tue, 16 Jun 2020 09:39:36: Fewer paired peaks (171) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 171 pairs to build model! INFO @ Tue, 16 Jun 2020 09:39:36: start model_add_line... INFO @ Tue, 16 Jun 2020 09:39:36: start X-correlation... INFO @ Tue, 16 Jun 2020 09:39:36: end of X-cor INFO @ Tue, 16 Jun 2020 09:39:36: #2 finished! INFO @ Tue, 16 Jun 2020 09:39:36: #2 predicted fragment length is 140 bps INFO @ Tue, 16 Jun 2020 09:39:36: #2 alternative fragment length(s) may be 3,67,83,140,159 bps INFO @ Tue, 16 Jun 2020 09:39:36: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX4419817/SRX4419817.10_model.r INFO @ Tue, 16 Jun 2020 09:39:36: #3 Call peaks... INFO @ Tue, 16 Jun 2020 09:39:36: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 16 Jun 2020 09:39:37: 37000000 INFO @ Tue, 16 Jun 2020 09:39:42: 38000000 INFO @ Tue, 16 Jun 2020 09:39:46: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX4419817/SRX4419817.05_peaks.xls INFO @ Tue, 16 Jun 2020 09:39:46: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX4419817/SRX4419817.05_peaks.narrowPeak INFO @ Tue, 16 Jun 2020 09:39:46: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX4419817/SRX4419817.05_summits.bed INFO @ Tue, 16 Jun 2020 09:39:46: Done! pass1 - making usageList (6 chroms): 1 millis pass2 - checking and writing primary data (310 records, 4 fields): 1 millis CompletedMACS2peakCalling INFO @ Tue, 16 Jun 2020 09:39:48: 39000000 INFO @ Tue, 16 Jun 2020 09:39:53: 40000000 BigWig に変換しました。 INFO @ Tue, 16 Jun 2020 09:39:58: 41000000 INFO @ Tue, 16 Jun 2020 09:40:03: 42000000 INFO @ Tue, 16 Jun 2020 09:40:04: #1 tag size is determined as 50 bps INFO @ Tue, 16 Jun 2020 09:40:04: #1 tag size = 50 INFO @ Tue, 16 Jun 2020 09:40:04: #1 total tags in treatment: 19984685 INFO @ Tue, 16 Jun 2020 09:40:04: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 09:40:04: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 09:40:05: #1 tags after filtering in treatment: 16308420 INFO @ Tue, 16 Jun 2020 09:40:05: #1 Redundant rate of treatment: 0.18 INFO @ Tue, 16 Jun 2020 09:40:05: #1 finished! INFO @ Tue, 16 Jun 2020 09:40:05: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 09:40:05: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 09:40:06: #2 number of paired peaks: 171 WARNING @ Tue, 16 Jun 2020 09:40:06: Fewer paired peaks (171) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 171 pairs to build model! INFO @ Tue, 16 Jun 2020 09:40:06: start model_add_line... INFO @ Tue, 16 Jun 2020 09:40:06: start X-correlation... INFO @ Tue, 16 Jun 2020 09:40:06: end of X-cor INFO @ Tue, 16 Jun 2020 09:40:06: #2 finished! INFO @ Tue, 16 Jun 2020 09:40:06: #2 predicted fragment length is 140 bps INFO @ Tue, 16 Jun 2020 09:40:06: #2 alternative fragment length(s) may be 3,67,83,140,159 bps INFO @ Tue, 16 Jun 2020 09:40:06: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX4419817/SRX4419817.20_model.r INFO @ Tue, 16 Jun 2020 09:40:06: #3 Call peaks... INFO @ Tue, 16 Jun 2020 09:40:06: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 16 Jun 2020 09:40:08: #3 Call peaks for each chromosome... INFO @ Tue, 16 Jun 2020 09:40:23: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX4419817/SRX4419817.10_peaks.xls INFO @ Tue, 16 Jun 2020 09:40:23: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX4419817/SRX4419817.10_peaks.narrowPeak INFO @ Tue, 16 Jun 2020 09:40:23: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX4419817/SRX4419817.10_summits.bed INFO @ Tue, 16 Jun 2020 09:40:23: Done! pass1 - making usageList (6 chroms): 0 millis pass2 - checking and writing primary data (224 records, 4 fields): 15 millis CompletedMACS2peakCalling INFO @ Tue, 16 Jun 2020 09:40:37: #3 Call peaks for each chromosome... INFO @ Tue, 16 Jun 2020 09:40:52: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX4419817/SRX4419817.20_peaks.xls INFO @ Tue, 16 Jun 2020 09:40:52: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX4419817/SRX4419817.20_peaks.narrowPeak INFO @ Tue, 16 Jun 2020 09:40:52: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX4419817/SRX4419817.20_summits.bed INFO @ Tue, 16 Jun 2020 09:40:52: Done! pass1 - making usageList (6 chroms): 1 millis pass2 - checking and writing primary data (152 records, 4 fields): 1 millis CompletedMACS2peakCalling