Job ID = 6507793 SRX = SRX4085396 Genome = ce11 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2020-06-26T12:32:56 prefetch.2.10.7: 1) Downloading 'SRR7167425'... 2020-06-26T12:32:56 prefetch.2.10.7: Downloading via HTTPS... 2020-06-26T12:47:06 prefetch.2.10.7: HTTPS download succeed 2020-06-26T12:47:06 prefetch.2.10.7: 1) 'SRR7167425' was downloaded successfully Read 37815683 spots for SRR7167425/SRR7167425.sra Written 37815683 spots for SRR7167425/SRR7167425.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:40:19 37815683 reads; of these: 37815683 (100.00%) were paired; of these: 2148405 (5.68%) aligned concordantly 0 times 31877240 (84.30%) aligned concordantly exactly 1 time 3790038 (10.02%) aligned concordantly >1 times ---- 2148405 pairs aligned concordantly 0 times; of these: 367573 (17.11%) aligned discordantly 1 time ---- 1780832 pairs aligned 0 times concordantly or discordantly; of these: 3561664 mates make up the pairs; of these: 2670379 (74.98%) aligned 0 times 658299 (18.48%) aligned exactly 1 time 232986 (6.54%) aligned >1 times 96.47% overall alignment rate Time searching: 00:40:19 Overall time: 00:40:19 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 32 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 13390293 / 35817342 = 0.3738 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 26 Jun 2020 22:57:06: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX4085396/SRX4085396.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX4085396/SRX4085396.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX4085396/SRX4085396.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX4085396/SRX4085396.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 26 Jun 2020 22:57:06: #1 read tag files... INFO @ Fri, 26 Jun 2020 22:57:06: #1 read treatment tags... INFO @ Fri, 26 Jun 2020 22:57:14: 1000000 INFO @ Fri, 26 Jun 2020 22:57:24: 2000000 INFO @ Fri, 26 Jun 2020 22:57:31: 3000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 26 Jun 2020 22:57:36: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX4085396/SRX4085396.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX4085396/SRX4085396.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX4085396/SRX4085396.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX4085396/SRX4085396.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 26 Jun 2020 22:57:36: #1 read tag files... INFO @ Fri, 26 Jun 2020 22:57:36: #1 read treatment tags... INFO @ Fri, 26 Jun 2020 22:57:43: 4000000 INFO @ Fri, 26 Jun 2020 22:57:44: 1000000 INFO @ Fri, 26 Jun 2020 22:57:52: 2000000 INFO @ Fri, 26 Jun 2020 22:57:55: 5000000 INFO @ Fri, 26 Jun 2020 22:57:59: 3000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 26 Jun 2020 22:58:05: 6000000 INFO @ Fri, 26 Jun 2020 22:58:06: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX4085396/SRX4085396.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX4085396/SRX4085396.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX4085396/SRX4085396.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX4085396/SRX4085396.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 26 Jun 2020 22:58:06: #1 read tag files... INFO @ Fri, 26 Jun 2020 22:58:06: #1 read treatment tags... INFO @ Fri, 26 Jun 2020 22:58:09: 4000000 INFO @ Fri, 26 Jun 2020 22:58:16: 1000000 INFO @ Fri, 26 Jun 2020 22:58:16: 7000000 INFO @ Fri, 26 Jun 2020 22:58:20: 5000000 INFO @ Fri, 26 Jun 2020 22:58:25: 2000000 INFO @ Fri, 26 Jun 2020 22:58:25: 8000000 INFO @ Fri, 26 Jun 2020 22:58:29: 6000000 INFO @ Fri, 26 Jun 2020 22:58:32: 3000000 INFO @ Fri, 26 Jun 2020 22:58:35: 9000000 INFO @ Fri, 26 Jun 2020 22:58:38: 7000000 INFO @ Fri, 26 Jun 2020 22:58:39: 4000000 INFO @ Fri, 26 Jun 2020 22:58:44: 10000000 INFO @ Fri, 26 Jun 2020 22:58:48: 5000000 INFO @ Fri, 26 Jun 2020 22:58:48: 8000000 INFO @ Fri, 26 Jun 2020 22:58:53: 11000000 INFO @ Fri, 26 Jun 2020 22:58:57: 6000000 INFO @ Fri, 26 Jun 2020 22:58:58: 9000000 INFO @ Fri, 26 Jun 2020 22:59:02: 12000000 INFO @ Fri, 26 Jun 2020 22:59:05: 7000000 INFO @ Fri, 26 Jun 2020 22:59:07: 10000000 INFO @ Fri, 26 Jun 2020 22:59:11: 13000000 INFO @ Fri, 26 Jun 2020 22:59:14: 8000000 INFO @ Fri, 26 Jun 2020 22:59:16: 11000000 INFO @ Fri, 26 Jun 2020 22:59:19: 14000000 INFO @ Fri, 26 Jun 2020 22:59:22: 9000000 INFO @ Fri, 26 Jun 2020 22:59:25: 12000000 INFO @ Fri, 26 Jun 2020 22:59:28: 15000000 INFO @ Fri, 26 Jun 2020 22:59:30: 10000000 INFO @ Fri, 26 Jun 2020 22:59:35: 13000000 INFO @ Fri, 26 Jun 2020 22:59:38: 16000000 INFO @ Fri, 26 Jun 2020 22:59:38: 11000000 INFO @ Fri, 26 Jun 2020 22:59:45: 12000000 INFO @ Fri, 26 Jun 2020 22:59:45: 14000000 INFO @ Fri, 26 Jun 2020 22:59:45: 17000000 INFO @ Fri, 26 Jun 2020 22:59:52: 13000000 INFO @ Fri, 26 Jun 2020 22:59:53: 18000000 INFO @ Fri, 26 Jun 2020 22:59:54: 15000000 INFO @ Fri, 26 Jun 2020 23:00:01: 14000000 INFO @ Fri, 26 Jun 2020 23:00:02: 16000000 INFO @ Fri, 26 Jun 2020 23:00:02: 19000000 INFO @ Fri, 26 Jun 2020 23:00:09: 15000000 INFO @ Fri, 26 Jun 2020 23:00:10: 20000000 INFO @ Fri, 26 Jun 2020 23:00:10: 17000000 INFO @ Fri, 26 Jun 2020 23:00:17: 16000000 INFO @ Fri, 26 Jun 2020 23:00:18: 21000000 INFO @ Fri, 26 Jun 2020 23:00:21: 18000000 INFO @ Fri, 26 Jun 2020 23:00:25: 17000000 INFO @ Fri, 26 Jun 2020 23:00:25: 22000000 INFO @ Fri, 26 Jun 2020 23:00:29: 19000000 INFO @ Fri, 26 Jun 2020 23:00:32: 23000000 INFO @ Fri, 26 Jun 2020 23:00:34: 18000000 INFO @ Fri, 26 Jun 2020 23:00:38: 20000000 INFO @ Fri, 26 Jun 2020 23:00:40: 24000000 INFO @ Fri, 26 Jun 2020 23:00:43: 19000000 INFO @ Fri, 26 Jun 2020 23:00:47: 21000000 INFO @ Fri, 26 Jun 2020 23:00:48: 25000000 INFO @ Fri, 26 Jun 2020 23:00:50: 20000000 INFO @ Fri, 26 Jun 2020 23:00:55: 22000000 INFO @ Fri, 26 Jun 2020 23:00:56: 26000000 INFO @ Fri, 26 Jun 2020 23:00:58: 21000000 INFO @ Fri, 26 Jun 2020 23:01:03: 23000000 INFO @ Fri, 26 Jun 2020 23:01:04: 27000000 INFO @ Fri, 26 Jun 2020 23:01:05: 22000000 INFO @ Fri, 26 Jun 2020 23:01:12: 24000000 INFO @ Fri, 26 Jun 2020 23:01:12: 28000000 INFO @ Fri, 26 Jun 2020 23:01:13: 23000000 INFO @ Fri, 26 Jun 2020 23:01:20: 29000000 INFO @ Fri, 26 Jun 2020 23:01:21: 25000000 INFO @ Fri, 26 Jun 2020 23:01:21: 24000000 INFO @ Fri, 26 Jun 2020 23:01:28: 30000000 INFO @ Fri, 26 Jun 2020 23:01:30: 26000000 INFO @ Fri, 26 Jun 2020 23:01:32: 25000000 INFO @ Fri, 26 Jun 2020 23:01:36: 31000000 INFO @ Fri, 26 Jun 2020 23:01:39: 27000000 INFO @ Fri, 26 Jun 2020 23:01:41: 26000000 INFO @ Fri, 26 Jun 2020 23:01:45: 32000000 INFO @ Fri, 26 Jun 2020 23:01:48: 28000000 INFO @ Fri, 26 Jun 2020 23:01:49: 27000000 INFO @ Fri, 26 Jun 2020 23:01:52: 33000000 INFO @ Fri, 26 Jun 2020 23:01:57: 28000000 INFO @ Fri, 26 Jun 2020 23:01:59: 29000000 INFO @ Fri, 26 Jun 2020 23:02:01: 34000000 INFO @ Fri, 26 Jun 2020 23:02:05: 29000000 INFO @ Fri, 26 Jun 2020 23:02:07: 30000000 INFO @ Fri, 26 Jun 2020 23:02:11: 35000000 INFO @ Fri, 26 Jun 2020 23:02:15: 30000000 INFO @ Fri, 26 Jun 2020 23:02:16: 31000000 INFO @ Fri, 26 Jun 2020 23:02:19: 36000000 INFO @ Fri, 26 Jun 2020 23:02:24: 31000000 INFO @ Fri, 26 Jun 2020 23:02:25: 32000000 INFO @ Fri, 26 Jun 2020 23:02:27: 37000000 INFO @ Fri, 26 Jun 2020 23:02:32: 32000000 INFO @ Fri, 26 Jun 2020 23:02:33: 33000000 INFO @ Fri, 26 Jun 2020 23:02:35: 38000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Fri, 26 Jun 2020 23:02:41: 33000000 INFO @ Fri, 26 Jun 2020 23:02:42: 34000000 INFO @ Fri, 26 Jun 2020 23:02:43: 39000000 INFO @ Fri, 26 Jun 2020 23:02:49: 34000000 INFO @ Fri, 26 Jun 2020 23:02:51: 40000000 INFO @ Fri, 26 Jun 2020 23:02:53: 35000000 INFO @ Fri, 26 Jun 2020 23:02:57: 35000000 INFO @ Fri, 26 Jun 2020 23:03:00: 41000000 INFO @ Fri, 26 Jun 2020 23:03:02: 36000000 INFO @ Fri, 26 Jun 2020 23:03:06: 36000000 INFO @ Fri, 26 Jun 2020 23:03:10: 42000000 INFO @ Fri, 26 Jun 2020 23:03:13: 37000000 INFO @ Fri, 26 Jun 2020 23:03:16: 37000000 INFO @ Fri, 26 Jun 2020 23:03:19: 43000000 INFO @ Fri, 26 Jun 2020 23:03:21: 38000000 INFO @ Fri, 26 Jun 2020 23:03:24: 38000000 INFO @ Fri, 26 Jun 2020 23:03:26: 44000000 INFO @ Fri, 26 Jun 2020 23:03:30: 39000000 INFO @ Fri, 26 Jun 2020 23:03:31: 39000000 INFO @ Fri, 26 Jun 2020 23:03:34: 45000000 INFO @ Fri, 26 Jun 2020 23:03:39: 40000000 INFO @ Fri, 26 Jun 2020 23:03:39: 40000000 INFO @ Fri, 26 Jun 2020 23:03:41: 46000000 INFO @ Fri, 26 Jun 2020 23:03:42: #1 tag size is determined as 51 bps INFO @ Fri, 26 Jun 2020 23:03:42: #1 tag size = 51 INFO @ Fri, 26 Jun 2020 23:03:42: #1 total tags in treatment: 22328667 INFO @ Fri, 26 Jun 2020 23:03:42: #1 user defined the maximum tags... INFO @ Fri, 26 Jun 2020 23:03:42: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 26 Jun 2020 23:03:43: #1 tags after filtering in treatment: 18009152 INFO @ Fri, 26 Jun 2020 23:03:43: #1 Redundant rate of treatment: 0.19 INFO @ Fri, 26 Jun 2020 23:03:43: #1 finished! INFO @ Fri, 26 Jun 2020 23:03:43: #2 Build Peak Model... INFO @ Fri, 26 Jun 2020 23:03:43: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 26 Jun 2020 23:03:44: #2 number of paired peaks: 211 WARNING @ Fri, 26 Jun 2020 23:03:44: Fewer paired peaks (211) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 211 pairs to build model! INFO @ Fri, 26 Jun 2020 23:03:44: start model_add_line... INFO @ Fri, 26 Jun 2020 23:03:44: start X-correlation... INFO @ Fri, 26 Jun 2020 23:03:44: end of X-cor INFO @ Fri, 26 Jun 2020 23:03:44: #2 finished! INFO @ Fri, 26 Jun 2020 23:03:44: #2 predicted fragment length is 126 bps INFO @ Fri, 26 Jun 2020 23:03:44: #2 alternative fragment length(s) may be 4,91,126 bps INFO @ Fri, 26 Jun 2020 23:03:44: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX4085396/SRX4085396.05_model.r INFO @ Fri, 26 Jun 2020 23:03:44: #3 Call peaks... INFO @ Fri, 26 Jun 2020 23:03:44: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 26 Jun 2020 23:03:47: 41000000 INFO @ Fri, 26 Jun 2020 23:03:47: 41000000 INFO @ Fri, 26 Jun 2020 23:03:55: 42000000 INFO @ Fri, 26 Jun 2020 23:03:56: 42000000 INFO @ Fri, 26 Jun 2020 23:04:03: 43000000 INFO @ Fri, 26 Jun 2020 23:04:05: 43000000 BigWig に変換しました。 INFO @ Fri, 26 Jun 2020 23:04:11: 44000000 INFO @ Fri, 26 Jun 2020 23:04:13: 44000000 INFO @ Fri, 26 Jun 2020 23:04:17: 45000000 INFO @ Fri, 26 Jun 2020 23:04:20: 45000000 INFO @ Fri, 26 Jun 2020 23:04:21: #3 Call peaks for each chromosome... INFO @ Fri, 26 Jun 2020 23:04:25: 46000000 INFO @ Fri, 26 Jun 2020 23:04:26: #1 tag size is determined as 51 bps INFO @ Fri, 26 Jun 2020 23:04:26: #1 tag size = 51 INFO @ Fri, 26 Jun 2020 23:04:26: #1 total tags in treatment: 22328667 INFO @ Fri, 26 Jun 2020 23:04:26: #1 user defined the maximum tags... INFO @ Fri, 26 Jun 2020 23:04:26: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 26 Jun 2020 23:04:26: #1 tags after filtering in treatment: 18009152 INFO @ Fri, 26 Jun 2020 23:04:26: #1 Redundant rate of treatment: 0.19 INFO @ Fri, 26 Jun 2020 23:04:26: #1 finished! INFO @ Fri, 26 Jun 2020 23:04:26: #2 Build Peak Model... INFO @ Fri, 26 Jun 2020 23:04:26: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 26 Jun 2020 23:04:28: #2 number of paired peaks: 211 WARNING @ Fri, 26 Jun 2020 23:04:28: Fewer paired peaks (211) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 211 pairs to build model! INFO @ Fri, 26 Jun 2020 23:04:28: start model_add_line... INFO @ Fri, 26 Jun 2020 23:04:28: start X-correlation... INFO @ Fri, 26 Jun 2020 23:04:28: 46000000 INFO @ Fri, 26 Jun 2020 23:04:28: end of X-cor INFO @ Fri, 26 Jun 2020 23:04:28: #2 finished! INFO @ Fri, 26 Jun 2020 23:04:28: #2 predicted fragment length is 126 bps INFO @ Fri, 26 Jun 2020 23:04:28: #2 alternative fragment length(s) may be 4,91,126 bps INFO @ Fri, 26 Jun 2020 23:04:28: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX4085396/SRX4085396.20_model.r INFO @ Fri, 26 Jun 2020 23:04:28: #3 Call peaks... INFO @ Fri, 26 Jun 2020 23:04:28: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 26 Jun 2020 23:04:29: #1 tag size is determined as 51 bps INFO @ Fri, 26 Jun 2020 23:04:29: #1 tag size = 51 INFO @ Fri, 26 Jun 2020 23:04:29: #1 total tags in treatment: 22328667 INFO @ Fri, 26 Jun 2020 23:04:29: #1 user defined the maximum tags... INFO @ Fri, 26 Jun 2020 23:04:29: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 26 Jun 2020 23:04:30: #1 tags after filtering in treatment: 18009152 INFO @ Fri, 26 Jun 2020 23:04:30: #1 Redundant rate of treatment: 0.19 INFO @ Fri, 26 Jun 2020 23:04:30: #1 finished! INFO @ Fri, 26 Jun 2020 23:04:30: #2 Build Peak Model... INFO @ Fri, 26 Jun 2020 23:04:30: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 26 Jun 2020 23:04:32: #2 number of paired peaks: 211 WARNING @ Fri, 26 Jun 2020 23:04:32: Fewer paired peaks (211) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 211 pairs to build model! INFO @ Fri, 26 Jun 2020 23:04:32: start model_add_line... INFO @ Fri, 26 Jun 2020 23:04:32: start X-correlation... INFO @ Fri, 26 Jun 2020 23:04:32: end of X-cor INFO @ Fri, 26 Jun 2020 23:04:32: #2 finished! INFO @ Fri, 26 Jun 2020 23:04:32: #2 predicted fragment length is 126 bps INFO @ Fri, 26 Jun 2020 23:04:32: #2 alternative fragment length(s) may be 4,91,126 bps INFO @ Fri, 26 Jun 2020 23:04:32: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX4085396/SRX4085396.10_model.r INFO @ Fri, 26 Jun 2020 23:04:32: #3 Call peaks... INFO @ Fri, 26 Jun 2020 23:04:32: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 26 Jun 2020 23:04:39: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX4085396/SRX4085396.05_peaks.xls INFO @ Fri, 26 Jun 2020 23:04:39: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX4085396/SRX4085396.05_peaks.narrowPeak INFO @ Fri, 26 Jun 2020 23:04:39: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX4085396/SRX4085396.05_summits.bed INFO @ Fri, 26 Jun 2020 23:04:39: Done! pass1 - making usageList (7 chroms): 2 millis pass2 - checking and writing primary data (4019 records, 4 fields): 6 millis CompletedMACS2peakCalling INFO @ Fri, 26 Jun 2020 23:05:03: #3 Call peaks for each chromosome... INFO @ Fri, 26 Jun 2020 23:05:09: #3 Call peaks for each chromosome... INFO @ Fri, 26 Jun 2020 23:05:20: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX4085396/SRX4085396.20_peaks.xls INFO @ Fri, 26 Jun 2020 23:05:20: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX4085396/SRX4085396.20_peaks.narrowPeak INFO @ Fri, 26 Jun 2020 23:05:20: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX4085396/SRX4085396.20_summits.bed INFO @ Fri, 26 Jun 2020 23:05:20: Done! pass1 - making usageList (6 chroms): 1 millis pass2 - checking and writing primary data (1303 records, 4 fields): 3 millis CompletedMACS2peakCalling INFO @ Fri, 26 Jun 2020 23:05:28: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX4085396/SRX4085396.10_peaks.xls INFO @ Fri, 26 Jun 2020 23:05:28: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX4085396/SRX4085396.10_peaks.narrowPeak INFO @ Fri, 26 Jun 2020 23:05:28: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX4085396/SRX4085396.10_summits.bed INFO @ Fri, 26 Jun 2020 23:05:28: Done! pass1 - making usageList (7 chroms): 1 millis pass2 - checking and writing primary data (2547 records, 4 fields): 5 millis CompletedMACS2peakCalling