Job ID = 6367783 SRX = SRX4085353 Genome = ce11 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2020-06-15T23:31:35 prefetch.2.10.7: 1) Downloading 'SRR7167382'... 2020-06-15T23:31:35 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:50:51 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:50:51 prefetch.2.10.7: 1) 'SRR7167382' was downloaded successfully Read 56107690 spots for SRR7167382/SRR7167382.sra Written 56107690 spots for SRR7167382/SRR7167382.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:43:13 56107690 reads; of these: 56107690 (100.00%) were paired; of these: 4019237 (7.16%) aligned concordantly 0 times 46486820 (82.85%) aligned concordantly exactly 1 time 5601633 (9.98%) aligned concordantly >1 times ---- 4019237 pairs aligned concordantly 0 times; of these: 798963 (19.88%) aligned discordantly 1 time ---- 3220274 pairs aligned 0 times concordantly or discordantly; of these: 6440548 mates make up the pairs; of these: 4013419 (62.31%) aligned 0 times 1872090 (29.07%) aligned exactly 1 time 555039 (8.62%) aligned >1 times 96.42% overall alignment rate Time searching: 00:43:13 Overall time: 00:43:13 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 48 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 18316605 / 52565233 = 0.3485 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 10:05:25: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX4085353/SRX4085353.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX4085353/SRX4085353.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX4085353/SRX4085353.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX4085353/SRX4085353.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 10:05:25: #1 read tag files... INFO @ Tue, 16 Jun 2020 10:05:25: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 10:05:31: 1000000 INFO @ Tue, 16 Jun 2020 10:05:37: 2000000 INFO @ Tue, 16 Jun 2020 10:05:43: 3000000 INFO @ Tue, 16 Jun 2020 10:05:49: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 10:05:54: 5000000 INFO @ Tue, 16 Jun 2020 10:05:55: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX4085353/SRX4085353.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX4085353/SRX4085353.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX4085353/SRX4085353.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX4085353/SRX4085353.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 10:05:55: #1 read tag files... INFO @ Tue, 16 Jun 2020 10:05:55: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 10:06:01: 6000000 INFO @ Tue, 16 Jun 2020 10:06:01: 1000000 INFO @ Tue, 16 Jun 2020 10:06:07: 7000000 INFO @ Tue, 16 Jun 2020 10:06:08: 2000000 INFO @ Tue, 16 Jun 2020 10:06:14: 8000000 INFO @ Tue, 16 Jun 2020 10:06:14: 3000000 INFO @ Tue, 16 Jun 2020 10:06:21: 9000000 INFO @ Tue, 16 Jun 2020 10:06:21: 4000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 10:06:25: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX4085353/SRX4085353.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX4085353/SRX4085353.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX4085353/SRX4085353.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX4085353/SRX4085353.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 10:06:25: #1 read tag files... INFO @ Tue, 16 Jun 2020 10:06:25: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 10:06:28: 10000000 INFO @ Tue, 16 Jun 2020 10:06:28: 5000000 INFO @ Tue, 16 Jun 2020 10:06:32: 1000000 INFO @ Tue, 16 Jun 2020 10:06:35: 11000000 INFO @ Tue, 16 Jun 2020 10:06:36: 6000000 INFO @ Tue, 16 Jun 2020 10:06:40: 2000000 INFO @ Tue, 16 Jun 2020 10:06:43: 12000000 INFO @ Tue, 16 Jun 2020 10:06:43: 7000000 INFO @ Tue, 16 Jun 2020 10:06:48: 3000000 INFO @ Tue, 16 Jun 2020 10:06:50: 13000000 INFO @ Tue, 16 Jun 2020 10:06:51: 8000000 INFO @ Tue, 16 Jun 2020 10:06:56: 4000000 INFO @ Tue, 16 Jun 2020 10:06:58: 14000000 INFO @ Tue, 16 Jun 2020 10:06:59: 9000000 INFO @ Tue, 16 Jun 2020 10:07:04: 5000000 INFO @ Tue, 16 Jun 2020 10:07:05: 15000000 INFO @ Tue, 16 Jun 2020 10:07:06: 10000000 INFO @ Tue, 16 Jun 2020 10:07:12: 6000000 INFO @ Tue, 16 Jun 2020 10:07:13: 16000000 INFO @ Tue, 16 Jun 2020 10:07:14: 11000000 INFO @ Tue, 16 Jun 2020 10:07:20: 17000000 INFO @ Tue, 16 Jun 2020 10:07:20: 7000000 INFO @ Tue, 16 Jun 2020 10:07:21: 12000000 INFO @ Tue, 16 Jun 2020 10:07:28: 18000000 INFO @ Tue, 16 Jun 2020 10:07:29: 8000000 INFO @ Tue, 16 Jun 2020 10:07:29: 13000000 INFO @ Tue, 16 Jun 2020 10:07:35: 19000000 INFO @ Tue, 16 Jun 2020 10:07:37: 14000000 INFO @ Tue, 16 Jun 2020 10:07:37: 9000000 INFO @ Tue, 16 Jun 2020 10:07:42: 20000000 INFO @ Tue, 16 Jun 2020 10:07:44: 15000000 INFO @ Tue, 16 Jun 2020 10:07:45: 10000000 INFO @ Tue, 16 Jun 2020 10:07:50: 21000000 INFO @ Tue, 16 Jun 2020 10:07:51: 16000000 INFO @ Tue, 16 Jun 2020 10:07:53: 11000000 INFO @ Tue, 16 Jun 2020 10:07:57: 22000000 INFO @ Tue, 16 Jun 2020 10:07:59: 17000000 INFO @ Tue, 16 Jun 2020 10:08:00: 12000000 INFO @ Tue, 16 Jun 2020 10:08:04: 23000000 INFO @ Tue, 16 Jun 2020 10:08:06: 18000000 INFO @ Tue, 16 Jun 2020 10:08:08: 13000000 INFO @ Tue, 16 Jun 2020 10:08:12: 24000000 INFO @ Tue, 16 Jun 2020 10:08:13: 19000000 INFO @ Tue, 16 Jun 2020 10:08:15: 14000000 INFO @ Tue, 16 Jun 2020 10:08:19: 25000000 INFO @ Tue, 16 Jun 2020 10:08:21: 20000000 INFO @ Tue, 16 Jun 2020 10:08:22: 15000000 INFO @ Tue, 16 Jun 2020 10:08:26: 26000000 INFO @ Tue, 16 Jun 2020 10:08:28: 21000000 INFO @ Tue, 16 Jun 2020 10:08:30: 16000000 INFO @ Tue, 16 Jun 2020 10:08:34: 27000000 INFO @ Tue, 16 Jun 2020 10:08:35: 22000000 INFO @ Tue, 16 Jun 2020 10:08:38: 17000000 INFO @ Tue, 16 Jun 2020 10:08:41: 28000000 INFO @ Tue, 16 Jun 2020 10:08:42: 23000000 INFO @ Tue, 16 Jun 2020 10:08:46: 18000000 INFO @ Tue, 16 Jun 2020 10:08:48: 29000000 INFO @ Tue, 16 Jun 2020 10:08:50: 24000000 INFO @ Tue, 16 Jun 2020 10:08:54: 19000000 INFO @ Tue, 16 Jun 2020 10:08:56: 30000000 INFO @ Tue, 16 Jun 2020 10:08:57: 25000000 INFO @ Tue, 16 Jun 2020 10:09:01: 20000000 INFO @ Tue, 16 Jun 2020 10:09:03: 31000000 INFO @ Tue, 16 Jun 2020 10:09:04: 26000000 INFO @ Tue, 16 Jun 2020 10:09:09: 21000000 INFO @ Tue, 16 Jun 2020 10:09:10: 32000000 INFO @ Tue, 16 Jun 2020 10:09:11: 27000000 INFO @ Tue, 16 Jun 2020 10:09:16: 22000000 INFO @ Tue, 16 Jun 2020 10:09:17: 33000000 INFO @ Tue, 16 Jun 2020 10:09:18: 28000000 INFO @ Tue, 16 Jun 2020 10:09:24: 23000000 INFO @ Tue, 16 Jun 2020 10:09:24: 34000000 INFO @ Tue, 16 Jun 2020 10:09:25: 29000000 INFO @ Tue, 16 Jun 2020 10:09:31: 35000000 INFO @ Tue, 16 Jun 2020 10:09:31: 24000000 INFO @ Tue, 16 Jun 2020 10:09:32: 30000000 INFO @ Tue, 16 Jun 2020 10:09:38: 36000000 INFO @ Tue, 16 Jun 2020 10:09:39: 25000000 INFO @ Tue, 16 Jun 2020 10:09:39: 31000000 INFO @ Tue, 16 Jun 2020 10:09:45: 37000000 INFO @ Tue, 16 Jun 2020 10:09:46: 32000000 INFO @ Tue, 16 Jun 2020 10:09:46: 26000000 INFO @ Tue, 16 Jun 2020 10:09:52: 38000000 INFO @ Tue, 16 Jun 2020 10:09:53: 33000000 INFO @ Tue, 16 Jun 2020 10:09:54: 27000000 INFO @ Tue, 16 Jun 2020 10:09:59: 39000000 INFO @ Tue, 16 Jun 2020 10:10:00: 34000000 INFO @ Tue, 16 Jun 2020 10:10:02: 28000000 INFO @ Tue, 16 Jun 2020 10:10:06: 40000000 INFO @ Tue, 16 Jun 2020 10:10:07: 35000000 INFO @ Tue, 16 Jun 2020 10:10:09: 29000000 INFO @ Tue, 16 Jun 2020 10:10:13: 41000000 INFO @ Tue, 16 Jun 2020 10:10:14: 36000000 INFO @ Tue, 16 Jun 2020 10:10:17: 30000000 INFO @ Tue, 16 Jun 2020 10:10:20: 42000000 INFO @ Tue, 16 Jun 2020 10:10:21: 37000000 INFO @ Tue, 16 Jun 2020 10:10:24: 31000000 INFO @ Tue, 16 Jun 2020 10:10:27: 43000000 INFO @ Tue, 16 Jun 2020 10:10:28: 38000000 INFO @ Tue, 16 Jun 2020 10:10:31: 32000000 INFO @ Tue, 16 Jun 2020 10:10:34: 44000000 INFO @ Tue, 16 Jun 2020 10:10:35: 39000000 INFO @ Tue, 16 Jun 2020 10:10:39: 33000000 INFO @ Tue, 16 Jun 2020 10:10:41: 45000000 INFO @ Tue, 16 Jun 2020 10:10:42: 40000000 INFO @ Tue, 16 Jun 2020 10:10:46: 34000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 16 Jun 2020 10:10:48: 46000000 INFO @ Tue, 16 Jun 2020 10:10:49: 41000000 INFO @ Tue, 16 Jun 2020 10:10:54: 35000000 INFO @ Tue, 16 Jun 2020 10:10:55: 47000000 INFO @ Tue, 16 Jun 2020 10:10:56: 42000000 INFO @ Tue, 16 Jun 2020 10:11:02: 36000000 INFO @ Tue, 16 Jun 2020 10:11:02: 48000000 INFO @ Tue, 16 Jun 2020 10:11:03: 43000000 INFO @ Tue, 16 Jun 2020 10:11:09: 49000000 INFO @ Tue, 16 Jun 2020 10:11:09: 37000000 INFO @ Tue, 16 Jun 2020 10:11:10: 44000000 INFO @ Tue, 16 Jun 2020 10:11:16: 50000000 INFO @ Tue, 16 Jun 2020 10:11:17: 45000000 INFO @ Tue, 16 Jun 2020 10:11:17: 38000000 INFO @ Tue, 16 Jun 2020 10:11:23: 51000000 INFO @ Tue, 16 Jun 2020 10:11:24: 46000000 INFO @ Tue, 16 Jun 2020 10:11:24: 39000000 INFO @ Tue, 16 Jun 2020 10:11:29: 52000000 INFO @ Tue, 16 Jun 2020 10:11:30: 47000000 INFO @ Tue, 16 Jun 2020 10:11:32: 40000000 INFO @ Tue, 16 Jun 2020 10:11:36: 53000000 INFO @ Tue, 16 Jun 2020 10:11:37: 48000000 INFO @ Tue, 16 Jun 2020 10:11:39: 41000000 INFO @ Tue, 16 Jun 2020 10:11:43: 54000000 INFO @ Tue, 16 Jun 2020 10:11:44: 49000000 INFO @ Tue, 16 Jun 2020 10:11:47: 42000000 INFO @ Tue, 16 Jun 2020 10:11:50: 55000000 INFO @ Tue, 16 Jun 2020 10:11:51: 50000000 INFO @ Tue, 16 Jun 2020 10:11:55: 43000000 INFO @ Tue, 16 Jun 2020 10:11:57: 56000000 INFO @ Tue, 16 Jun 2020 10:11:58: 51000000 INFO @ Tue, 16 Jun 2020 10:12:02: 44000000 INFO @ Tue, 16 Jun 2020 10:12:04: 57000000 INFO @ Tue, 16 Jun 2020 10:12:05: 52000000 BigWig に変換しました。 INFO @ Tue, 16 Jun 2020 10:12:10: 45000000 INFO @ Tue, 16 Jun 2020 10:12:11: 58000000 INFO @ Tue, 16 Jun 2020 10:12:12: 53000000 INFO @ Tue, 16 Jun 2020 10:12:18: 59000000 INFO @ Tue, 16 Jun 2020 10:12:19: 46000000 INFO @ Tue, 16 Jun 2020 10:12:19: 54000000 INFO @ Tue, 16 Jun 2020 10:12:25: 60000000 INFO @ Tue, 16 Jun 2020 10:12:26: 55000000 INFO @ Tue, 16 Jun 2020 10:12:27: 47000000 INFO @ Tue, 16 Jun 2020 10:12:32: 61000000 INFO @ Tue, 16 Jun 2020 10:12:33: 56000000 INFO @ Tue, 16 Jun 2020 10:12:35: 48000000 INFO @ Tue, 16 Jun 2020 10:12:39: 62000000 INFO @ Tue, 16 Jun 2020 10:12:40: 57000000 INFO @ Tue, 16 Jun 2020 10:12:44: 49000000 INFO @ Tue, 16 Jun 2020 10:12:46: 63000000 INFO @ Tue, 16 Jun 2020 10:12:47: 58000000 INFO @ Tue, 16 Jun 2020 10:12:52: 50000000 INFO @ Tue, 16 Jun 2020 10:12:53: 64000000 INFO @ Tue, 16 Jun 2020 10:12:54: 59000000 INFO @ Tue, 16 Jun 2020 10:13:00: 51000000 INFO @ Tue, 16 Jun 2020 10:13:00: 65000000 INFO @ Tue, 16 Jun 2020 10:13:01: 60000000 INFO @ Tue, 16 Jun 2020 10:13:07: 66000000 INFO @ Tue, 16 Jun 2020 10:13:08: 52000000 INFO @ Tue, 16 Jun 2020 10:13:08: 61000000 INFO @ Tue, 16 Jun 2020 10:13:14: 67000000 INFO @ Tue, 16 Jun 2020 10:13:15: 62000000 INFO @ Tue, 16 Jun 2020 10:13:16: 53000000 INFO @ Tue, 16 Jun 2020 10:13:21: 68000000 INFO @ Tue, 16 Jun 2020 10:13:22: 63000000 INFO @ Tue, 16 Jun 2020 10:13:25: 54000000 INFO @ Tue, 16 Jun 2020 10:13:28: 69000000 INFO @ Tue, 16 Jun 2020 10:13:29: 64000000 INFO @ Tue, 16 Jun 2020 10:13:33: 55000000 INFO @ Tue, 16 Jun 2020 10:13:36: 70000000 INFO @ Tue, 16 Jun 2020 10:13:36: 65000000 INFO @ Tue, 16 Jun 2020 10:13:41: 56000000 INFO @ Tue, 16 Jun 2020 10:13:43: 71000000 INFO @ Tue, 16 Jun 2020 10:13:43: 66000000 INFO @ Tue, 16 Jun 2020 10:13:47: #1 tag size is determined as 51 bps INFO @ Tue, 16 Jun 2020 10:13:47: #1 tag size = 51 INFO @ Tue, 16 Jun 2020 10:13:47: #1 total tags in treatment: 33891733 INFO @ Tue, 16 Jun 2020 10:13:47: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 10:13:47: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 10:13:47: #1 tags after filtering in treatment: 26059982 INFO @ Tue, 16 Jun 2020 10:13:47: #1 Redundant rate of treatment: 0.23 INFO @ Tue, 16 Jun 2020 10:13:47: #1 finished! INFO @ Tue, 16 Jun 2020 10:13:47: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 10:13:47: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 10:13:49: #2 number of paired peaks: 66 WARNING @ Tue, 16 Jun 2020 10:13:49: Too few paired peaks (66) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 16 Jun 2020 10:13:49: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce11/SRX4085353/SRX4085353.05_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 0 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4085353/SRX4085353.05_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4085353/SRX4085353.05_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4085353/SRX4085353.05_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Tue, 16 Jun 2020 10:13:50: 57000000 INFO @ Tue, 16 Jun 2020 10:13:50: 67000000 INFO @ Tue, 16 Jun 2020 10:13:57: 68000000 INFO @ Tue, 16 Jun 2020 10:13:58: 58000000 INFO @ Tue, 16 Jun 2020 10:14:04: 69000000 INFO @ Tue, 16 Jun 2020 10:14:06: 59000000 INFO @ Tue, 16 Jun 2020 10:14:11: 70000000 INFO @ Tue, 16 Jun 2020 10:14:14: 60000000 INFO @ Tue, 16 Jun 2020 10:14:18: 71000000 INFO @ Tue, 16 Jun 2020 10:14:22: #1 tag size is determined as 51 bps INFO @ Tue, 16 Jun 2020 10:14:22: #1 tag size = 51 INFO @ Tue, 16 Jun 2020 10:14:22: #1 total tags in treatment: 33891733 INFO @ Tue, 16 Jun 2020 10:14:22: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 10:14:22: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 10:14:22: 61000000 INFO @ Tue, 16 Jun 2020 10:14:23: #1 tags after filtering in treatment: 26059982 INFO @ Tue, 16 Jun 2020 10:14:23: #1 Redundant rate of treatment: 0.23 INFO @ Tue, 16 Jun 2020 10:14:23: #1 finished! INFO @ Tue, 16 Jun 2020 10:14:23: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 10:14:23: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 10:14:24: #2 number of paired peaks: 66 WARNING @ Tue, 16 Jun 2020 10:14:24: Too few paired peaks (66) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 16 Jun 2020 10:14:24: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce11/SRX4085353/SRX4085353.10_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4085353/SRX4085353.10_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4085353/SRX4085353.10_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4085353/SRX4085353.10_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Tue, 16 Jun 2020 10:14:30: 62000000 INFO @ Tue, 16 Jun 2020 10:14:37: 63000000 INFO @ Tue, 16 Jun 2020 10:14:45: 64000000 INFO @ Tue, 16 Jun 2020 10:14:53: 65000000 INFO @ Tue, 16 Jun 2020 10:15:00: 66000000 INFO @ Tue, 16 Jun 2020 10:15:08: 67000000 INFO @ Tue, 16 Jun 2020 10:15:16: 68000000 INFO @ Tue, 16 Jun 2020 10:15:23: 69000000 INFO @ Tue, 16 Jun 2020 10:15:31: 70000000 INFO @ Tue, 16 Jun 2020 10:15:39: 71000000 INFO @ Tue, 16 Jun 2020 10:15:43: #1 tag size is determined as 51 bps INFO @ Tue, 16 Jun 2020 10:15:43: #1 tag size = 51 INFO @ Tue, 16 Jun 2020 10:15:43: #1 total tags in treatment: 33891733 INFO @ Tue, 16 Jun 2020 10:15:43: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 10:15:43: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 10:15:44: #1 tags after filtering in treatment: 26059982 INFO @ Tue, 16 Jun 2020 10:15:44: #1 Redundant rate of treatment: 0.23 INFO @ Tue, 16 Jun 2020 10:15:44: #1 finished! INFO @ Tue, 16 Jun 2020 10:15:44: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 10:15:44: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 10:15:46: #2 number of paired peaks: 66 WARNING @ Tue, 16 Jun 2020 10:15:46: Too few paired peaks (66) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 16 Jun 2020 10:15:46: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce11/SRX4085353/SRX4085353.20_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 0 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4085353/SRX4085353.20_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4085353/SRX4085353.20_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4085353/SRX4085353.20_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling