Job ID = 12265440 SRX = SRX4082388 Genome = ce11 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:28:18 48530840 reads; of these: 48530840 (100.00%) were paired; of these: 5412172 (11.15%) aligned concordantly 0 times 38411129 (79.15%) aligned concordantly exactly 1 time 4707539 (9.70%) aligned concordantly >1 times ---- 5412172 pairs aligned concordantly 0 times; of these: 1089862 (20.14%) aligned discordantly 1 time ---- 4322310 pairs aligned 0 times concordantly or discordantly; of these: 8644620 mates make up the pairs; of these: 6545968 (75.72%) aligned 0 times 1618921 (18.73%) aligned exactly 1 time 479731 (5.55%) aligned >1 times 93.26% overall alignment rate Time searching: 00:28:18 Overall time: 00:28:18 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 40 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 18856616 / 43094077 = 0.4376 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 07:48:41: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX4082388/SRX4082388.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX4082388/SRX4082388.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX4082388/SRX4082388.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX4082388/SRX4082388.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 07:48:41: #1 read tag files... INFO @ Sat, 03 Apr 2021 07:48:41: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 07:48:47: 1000000 INFO @ Sat, 03 Apr 2021 07:48:54: 2000000 INFO @ Sat, 03 Apr 2021 07:49:00: 3000000 INFO @ Sat, 03 Apr 2021 07:49:06: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 07:49:11: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX4082388/SRX4082388.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX4082388/SRX4082388.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX4082388/SRX4082388.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX4082388/SRX4082388.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 07:49:11: #1 read tag files... INFO @ Sat, 03 Apr 2021 07:49:11: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 07:49:13: 5000000 INFO @ Sat, 03 Apr 2021 07:49:18: 1000000 INFO @ Sat, 03 Apr 2021 07:49:20: 6000000 INFO @ Sat, 03 Apr 2021 07:49:25: 2000000 INFO @ Sat, 03 Apr 2021 07:49:27: 7000000 INFO @ Sat, 03 Apr 2021 07:49:32: 3000000 INFO @ Sat, 03 Apr 2021 07:49:33: 8000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 07:49:39: 4000000 INFO @ Sat, 03 Apr 2021 07:49:40: 9000000 INFO @ Sat, 03 Apr 2021 07:49:41: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX4082388/SRX4082388.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX4082388/SRX4082388.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX4082388/SRX4082388.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX4082388/SRX4082388.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 07:49:41: #1 read tag files... INFO @ Sat, 03 Apr 2021 07:49:41: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 07:49:47: 5000000 INFO @ Sat, 03 Apr 2021 07:49:47: 10000000 INFO @ Sat, 03 Apr 2021 07:49:48: 1000000 INFO @ Sat, 03 Apr 2021 07:49:54: 6000000 INFO @ Sat, 03 Apr 2021 07:49:55: 11000000 INFO @ Sat, 03 Apr 2021 07:49:55: 2000000 INFO @ Sat, 03 Apr 2021 07:50:01: 3000000 INFO @ Sat, 03 Apr 2021 07:50:02: 7000000 INFO @ Sat, 03 Apr 2021 07:50:02: 12000000 INFO @ Sat, 03 Apr 2021 07:50:08: 4000000 INFO @ Sat, 03 Apr 2021 07:50:09: 13000000 INFO @ Sat, 03 Apr 2021 07:50:09: 8000000 INFO @ Sat, 03 Apr 2021 07:50:15: 5000000 INFO @ Sat, 03 Apr 2021 07:50:16: 14000000 INFO @ Sat, 03 Apr 2021 07:50:16: 9000000 INFO @ Sat, 03 Apr 2021 07:50:21: 6000000 INFO @ Sat, 03 Apr 2021 07:50:23: 15000000 INFO @ Sat, 03 Apr 2021 07:50:23: 10000000 INFO @ Sat, 03 Apr 2021 07:50:28: 7000000 INFO @ Sat, 03 Apr 2021 07:50:30: 16000000 INFO @ Sat, 03 Apr 2021 07:50:30: 11000000 INFO @ Sat, 03 Apr 2021 07:50:35: 8000000 INFO @ Sat, 03 Apr 2021 07:50:37: 17000000 INFO @ Sat, 03 Apr 2021 07:50:38: 12000000 INFO @ Sat, 03 Apr 2021 07:50:41: 9000000 INFO @ Sat, 03 Apr 2021 07:50:44: 18000000 INFO @ Sat, 03 Apr 2021 07:50:45: 13000000 INFO @ Sat, 03 Apr 2021 07:50:48: 10000000 INFO @ Sat, 03 Apr 2021 07:50:51: 19000000 INFO @ Sat, 03 Apr 2021 07:50:52: 14000000 INFO @ Sat, 03 Apr 2021 07:50:54: 11000000 INFO @ Sat, 03 Apr 2021 07:50:58: 20000000 INFO @ Sat, 03 Apr 2021 07:50:59: 15000000 INFO @ Sat, 03 Apr 2021 07:51:01: 12000000 INFO @ Sat, 03 Apr 2021 07:51:05: 21000000 INFO @ Sat, 03 Apr 2021 07:51:07: 16000000 INFO @ Sat, 03 Apr 2021 07:51:08: 13000000 INFO @ Sat, 03 Apr 2021 07:51:13: 22000000 INFO @ Sat, 03 Apr 2021 07:51:14: 17000000 INFO @ Sat, 03 Apr 2021 07:51:14: 14000000 INFO @ Sat, 03 Apr 2021 07:51:20: 23000000 INFO @ Sat, 03 Apr 2021 07:51:21: 18000000 INFO @ Sat, 03 Apr 2021 07:51:21: 15000000 INFO @ Sat, 03 Apr 2021 07:51:28: 16000000 INFO @ Sat, 03 Apr 2021 07:51:28: 24000000 INFO @ Sat, 03 Apr 2021 07:51:28: 19000000 INFO @ Sat, 03 Apr 2021 07:51:34: 17000000 INFO @ Sat, 03 Apr 2021 07:51:35: 20000000 INFO @ Sat, 03 Apr 2021 07:51:35: 25000000 INFO @ Sat, 03 Apr 2021 07:51:41: 18000000 INFO @ Sat, 03 Apr 2021 07:51:42: 21000000 INFO @ Sat, 03 Apr 2021 07:51:43: 26000000 INFO @ Sat, 03 Apr 2021 07:51:48: 19000000 INFO @ Sat, 03 Apr 2021 07:51:49: 22000000 INFO @ Sat, 03 Apr 2021 07:51:50: 27000000 INFO @ Sat, 03 Apr 2021 07:51:54: 20000000 INFO @ Sat, 03 Apr 2021 07:51:56: 23000000 INFO @ Sat, 03 Apr 2021 07:51:57: 28000000 INFO @ Sat, 03 Apr 2021 07:52:01: 21000000 INFO @ Sat, 03 Apr 2021 07:52:03: 24000000 INFO @ Sat, 03 Apr 2021 07:52:04: 29000000 INFO @ Sat, 03 Apr 2021 07:52:07: 22000000 INFO @ Sat, 03 Apr 2021 07:52:10: 25000000 INFO @ Sat, 03 Apr 2021 07:52:11: 30000000 INFO @ Sat, 03 Apr 2021 07:52:14: 23000000 INFO @ Sat, 03 Apr 2021 07:52:17: 26000000 INFO @ Sat, 03 Apr 2021 07:52:18: 31000000 INFO @ Sat, 03 Apr 2021 07:52:21: 24000000 INFO @ Sat, 03 Apr 2021 07:52:24: 27000000 INFO @ Sat, 03 Apr 2021 07:52:26: 32000000 INFO @ Sat, 03 Apr 2021 07:52:27: 25000000 INFO @ Sat, 03 Apr 2021 07:52:31: 28000000 INFO @ Sat, 03 Apr 2021 07:52:33: 33000000 INFO @ Sat, 03 Apr 2021 07:52:34: 26000000 INFO @ Sat, 03 Apr 2021 07:52:38: 29000000 INFO @ Sat, 03 Apr 2021 07:52:40: 34000000 INFO @ Sat, 03 Apr 2021 07:52:41: 27000000 INFO @ Sat, 03 Apr 2021 07:52:45: 30000000 INFO @ Sat, 03 Apr 2021 07:52:47: 35000000 INFO @ Sat, 03 Apr 2021 07:52:48: 28000000 INFO @ Sat, 03 Apr 2021 07:52:53: 31000000 INFO @ Sat, 03 Apr 2021 07:52:54: 29000000 INFO @ Sat, 03 Apr 2021 07:52:54: 36000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sat, 03 Apr 2021 07:53:00: 32000000 INFO @ Sat, 03 Apr 2021 07:53:01: 30000000 INFO @ Sat, 03 Apr 2021 07:53:02: 37000000 INFO @ Sat, 03 Apr 2021 07:53:07: 33000000 INFO @ Sat, 03 Apr 2021 07:53:08: 31000000 INFO @ Sat, 03 Apr 2021 07:53:09: 38000000 INFO @ Sat, 03 Apr 2021 07:53:14: 34000000 INFO @ Sat, 03 Apr 2021 07:53:14: 32000000 INFO @ Sat, 03 Apr 2021 07:53:16: 39000000 INFO @ Sat, 03 Apr 2021 07:53:21: 33000000 INFO @ Sat, 03 Apr 2021 07:53:21: 35000000 INFO @ Sat, 03 Apr 2021 07:53:23: 40000000 INFO @ Sat, 03 Apr 2021 07:53:28: 34000000 INFO @ Sat, 03 Apr 2021 07:53:28: 36000000 INFO @ Sat, 03 Apr 2021 07:53:30: 41000000 INFO @ Sat, 03 Apr 2021 07:53:34: 35000000 INFO @ Sat, 03 Apr 2021 07:53:35: 37000000 INFO @ Sat, 03 Apr 2021 07:53:38: 42000000 INFO @ Sat, 03 Apr 2021 07:53:41: 36000000 INFO @ Sat, 03 Apr 2021 07:53:42: 38000000 INFO @ Sat, 03 Apr 2021 07:53:45: 43000000 INFO @ Sat, 03 Apr 2021 07:53:48: 37000000 INFO @ Sat, 03 Apr 2021 07:53:50: 39000000 INFO @ Sat, 03 Apr 2021 07:53:52: 44000000 INFO @ Sat, 03 Apr 2021 07:53:55: 38000000 INFO @ Sat, 03 Apr 2021 07:53:57: 40000000 BigWig に変換しました。 INFO @ Sat, 03 Apr 2021 07:53:59: 45000000 INFO @ Sat, 03 Apr 2021 07:54:02: 39000000 INFO @ Sat, 03 Apr 2021 07:54:04: 41000000 INFO @ Sat, 03 Apr 2021 07:54:06: 46000000 INFO @ Sat, 03 Apr 2021 07:54:08: 40000000 INFO @ Sat, 03 Apr 2021 07:54:11: 42000000 INFO @ Sat, 03 Apr 2021 07:54:14: 47000000 INFO @ Sat, 03 Apr 2021 07:54:15: 41000000 INFO @ Sat, 03 Apr 2021 07:54:19: 43000000 INFO @ Sat, 03 Apr 2021 07:54:21: 48000000 INFO @ Sat, 03 Apr 2021 07:54:22: 42000000 INFO @ Sat, 03 Apr 2021 07:54:26: 44000000 INFO @ Sat, 03 Apr 2021 07:54:28: 49000000 INFO @ Sat, 03 Apr 2021 07:54:29: 43000000 INFO @ Sat, 03 Apr 2021 07:54:33: 45000000 INFO @ Sat, 03 Apr 2021 07:54:35: 50000000 INFO @ Sat, 03 Apr 2021 07:54:35: 44000000 INFO @ Sat, 03 Apr 2021 07:54:40: 46000000 INFO @ Sat, 03 Apr 2021 07:54:42: 45000000 INFO @ Sat, 03 Apr 2021 07:54:42: 51000000 INFO @ Sat, 03 Apr 2021 07:54:47: 47000000 INFO @ Sat, 03 Apr 2021 07:54:49: 46000000 INFO @ Sat, 03 Apr 2021 07:54:49: 52000000 INFO @ Sat, 03 Apr 2021 07:54:55: 48000000 INFO @ Sat, 03 Apr 2021 07:54:55: #1 tag size is determined as 43 bps INFO @ Sat, 03 Apr 2021 07:54:55: #1 tag size = 43 INFO @ Sat, 03 Apr 2021 07:54:55: #1 total tags in treatment: 24411186 INFO @ Sat, 03 Apr 2021 07:54:55: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 07:54:55: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 07:54:56: 47000000 INFO @ Sat, 03 Apr 2021 07:54:56: #1 tags after filtering in treatment: 13820674 INFO @ Sat, 03 Apr 2021 07:54:56: #1 Redundant rate of treatment: 0.43 INFO @ Sat, 03 Apr 2021 07:54:56: #1 finished! INFO @ Sat, 03 Apr 2021 07:54:56: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 07:54:56: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 07:54:57: #2 number of paired peaks: 550 WARNING @ Sat, 03 Apr 2021 07:54:57: Fewer paired peaks (550) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 550 pairs to build model! INFO @ Sat, 03 Apr 2021 07:54:57: start model_add_line... INFO @ Sat, 03 Apr 2021 07:54:57: start X-correlation... INFO @ Sat, 03 Apr 2021 07:54:57: end of X-cor INFO @ Sat, 03 Apr 2021 07:54:57: #2 finished! INFO @ Sat, 03 Apr 2021 07:54:57: #2 predicted fragment length is 81 bps INFO @ Sat, 03 Apr 2021 07:54:57: #2 alternative fragment length(s) may be 81 bps INFO @ Sat, 03 Apr 2021 07:54:57: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX4082388/SRX4082388.05_model.r WARNING @ Sat, 03 Apr 2021 07:54:57: #2 Since the d (81) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 07:54:57: #2 You may need to consider one of the other alternative d(s): 81 WARNING @ Sat, 03 Apr 2021 07:54:57: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 07:54:57: #3 Call peaks... INFO @ Sat, 03 Apr 2021 07:54:57: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 07:55:01: 49000000 INFO @ Sat, 03 Apr 2021 07:55:02: 48000000 INFO @ Sat, 03 Apr 2021 07:55:08: 50000000 INFO @ Sat, 03 Apr 2021 07:55:09: 49000000 INFO @ Sat, 03 Apr 2021 07:55:15: 51000000 INFO @ Sat, 03 Apr 2021 07:55:16: 50000000 INFO @ Sat, 03 Apr 2021 07:55:22: 52000000 INFO @ Sat, 03 Apr 2021 07:55:22: 51000000 INFO @ Sat, 03 Apr 2021 07:55:28: #1 tag size is determined as 43 bps INFO @ Sat, 03 Apr 2021 07:55:28: #1 tag size = 43 INFO @ Sat, 03 Apr 2021 07:55:28: #1 total tags in treatment: 24411186 INFO @ Sat, 03 Apr 2021 07:55:28: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 07:55:28: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 07:55:28: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 07:55:28: #1 tags after filtering in treatment: 13820674 INFO @ Sat, 03 Apr 2021 07:55:28: #1 Redundant rate of treatment: 0.43 INFO @ Sat, 03 Apr 2021 07:55:28: #1 finished! INFO @ Sat, 03 Apr 2021 07:55:28: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 07:55:28: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 07:55:28: 52000000 INFO @ Sat, 03 Apr 2021 07:55:29: #2 number of paired peaks: 550 WARNING @ Sat, 03 Apr 2021 07:55:29: Fewer paired peaks (550) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 550 pairs to build model! INFO @ Sat, 03 Apr 2021 07:55:29: start model_add_line... INFO @ Sat, 03 Apr 2021 07:55:29: start X-correlation... INFO @ Sat, 03 Apr 2021 07:55:29: end of X-cor INFO @ Sat, 03 Apr 2021 07:55:29: #2 finished! INFO @ Sat, 03 Apr 2021 07:55:29: #2 predicted fragment length is 81 bps INFO @ Sat, 03 Apr 2021 07:55:29: #2 alternative fragment length(s) may be 81 bps INFO @ Sat, 03 Apr 2021 07:55:29: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX4082388/SRX4082388.10_model.r WARNING @ Sat, 03 Apr 2021 07:55:29: #2 Since the d (81) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 07:55:29: #2 You may need to consider one of the other alternative d(s): 81 WARNING @ Sat, 03 Apr 2021 07:55:29: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 07:55:29: #3 Call peaks... INFO @ Sat, 03 Apr 2021 07:55:29: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 07:55:33: #1 tag size is determined as 43 bps INFO @ Sat, 03 Apr 2021 07:55:33: #1 tag size = 43 INFO @ Sat, 03 Apr 2021 07:55:33: #1 total tags in treatment: 24411186 INFO @ Sat, 03 Apr 2021 07:55:33: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 07:55:33: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 07:55:34: #1 tags after filtering in treatment: 13820674 INFO @ Sat, 03 Apr 2021 07:55:34: #1 Redundant rate of treatment: 0.43 INFO @ Sat, 03 Apr 2021 07:55:34: #1 finished! INFO @ Sat, 03 Apr 2021 07:55:34: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 07:55:34: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 07:55:35: #2 number of paired peaks: 550 WARNING @ Sat, 03 Apr 2021 07:55:35: Fewer paired peaks (550) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 550 pairs to build model! INFO @ Sat, 03 Apr 2021 07:55:35: start model_add_line... INFO @ Sat, 03 Apr 2021 07:55:35: start X-correlation... INFO @ Sat, 03 Apr 2021 07:55:35: end of X-cor INFO @ Sat, 03 Apr 2021 07:55:35: #2 finished! INFO @ Sat, 03 Apr 2021 07:55:35: #2 predicted fragment length is 81 bps INFO @ Sat, 03 Apr 2021 07:55:35: #2 alternative fragment length(s) may be 81 bps INFO @ Sat, 03 Apr 2021 07:55:35: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX4082388/SRX4082388.20_model.r WARNING @ Sat, 03 Apr 2021 07:55:35: #2 Since the d (81) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 07:55:35: #2 You may need to consider one of the other alternative d(s): 81 WARNING @ Sat, 03 Apr 2021 07:55:35: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 07:55:35: #3 Call peaks... INFO @ Sat, 03 Apr 2021 07:55:35: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 07:55:45: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX4082388/SRX4082388.05_peaks.xls INFO @ Sat, 03 Apr 2021 07:55:45: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX4082388/SRX4082388.05_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 07:55:45: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX4082388/SRX4082388.05_summits.bed INFO @ Sat, 03 Apr 2021 07:55:45: Done! pass1 - making usageList (7 chroms): 2 millis pass2 - checking and writing primary data (12256 records, 4 fields): 13 millis CompletedMACS2peakCalling INFO @ Sat, 03 Apr 2021 07:55:58: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 07:56:07: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 07:56:14: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX4082388/SRX4082388.10_peaks.xls INFO @ Sat, 03 Apr 2021 07:56:14: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX4082388/SRX4082388.10_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 07:56:14: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX4082388/SRX4082388.10_summits.bed INFO @ Sat, 03 Apr 2021 07:56:14: Done! pass1 - making usageList (7 chroms): 1 millis pass2 - checking and writing primary data (7567 records, 4 fields): 9 millis CompletedMACS2peakCalling INFO @ Sat, 03 Apr 2021 07:56:24: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX4082388/SRX4082388.20_peaks.xls INFO @ Sat, 03 Apr 2021 07:56:24: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX4082388/SRX4082388.20_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 07:56:24: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX4082388/SRX4082388.20_summits.bed INFO @ Sat, 03 Apr 2021 07:56:24: Done! pass1 - making usageList (6 chroms): 1 millis pass2 - checking and writing primary data (3539 records, 4 fields): 6 millis CompletedMACS2peakCalling