Job ID = 12265417 SRX = SRX4082384 Genome = ce11 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:23:35 32468957 reads; of these: 32468957 (100.00%) were paired; of these: 3321831 (10.23%) aligned concordantly 0 times 25506191 (78.56%) aligned concordantly exactly 1 time 3640935 (11.21%) aligned concordantly >1 times ---- 3321831 pairs aligned concordantly 0 times; of these: 2199159 (66.20%) aligned discordantly 1 time ---- 1122672 pairs aligned 0 times concordantly or discordantly; of these: 2245344 mates make up the pairs; of these: 1096786 (48.85%) aligned 0 times 608163 (27.09%) aligned exactly 1 time 540395 (24.07%) aligned >1 times 98.31% overall alignment rate Time searching: 00:23:35 Overall time: 00:23:35 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 28 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 5628457 / 27185375 = 0.2070 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 07:34:50: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX4082384/SRX4082384.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX4082384/SRX4082384.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX4082384/SRX4082384.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX4082384/SRX4082384.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 07:34:50: #1 read tag files... INFO @ Sat, 03 Apr 2021 07:34:50: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 07:34:55: 1000000 INFO @ Sat, 03 Apr 2021 07:35:00: 2000000 INFO @ Sat, 03 Apr 2021 07:35:04: 3000000 INFO @ Sat, 03 Apr 2021 07:35:09: 4000000 INFO @ Sat, 03 Apr 2021 07:35:14: 5000000 WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 07:35:19: 6000000 INFO @ Sat, 03 Apr 2021 07:35:20: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX4082384/SRX4082384.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX4082384/SRX4082384.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX4082384/SRX4082384.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX4082384/SRX4082384.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 07:35:20: #1 read tag files... INFO @ Sat, 03 Apr 2021 07:35:20: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 07:35:24: 7000000 INFO @ Sat, 03 Apr 2021 07:35:24: 1000000 INFO @ Sat, 03 Apr 2021 07:35:28: 8000000 INFO @ Sat, 03 Apr 2021 07:35:29: 2000000 INFO @ Sat, 03 Apr 2021 07:35:33: 3000000 INFO @ Sat, 03 Apr 2021 07:35:33: 9000000 INFO @ Sat, 03 Apr 2021 07:35:37: 4000000 INFO @ Sat, 03 Apr 2021 07:35:38: 10000000 INFO @ Sat, 03 Apr 2021 07:35:42: 5000000 INFO @ Sat, 03 Apr 2021 07:35:43: 11000000 INFO @ Sat, 03 Apr 2021 07:35:46: 6000000 INFO @ Sat, 03 Apr 2021 07:35:48: 12000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 07:35:50: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX4082384/SRX4082384.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX4082384/SRX4082384.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX4082384/SRX4082384.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX4082384/SRX4082384.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 07:35:50: #1 read tag files... INFO @ Sat, 03 Apr 2021 07:35:50: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 07:35:50: 7000000 INFO @ Sat, 03 Apr 2021 07:35:53: 13000000 INFO @ Sat, 03 Apr 2021 07:35:54: 1000000 INFO @ Sat, 03 Apr 2021 07:35:54: 8000000 INFO @ Sat, 03 Apr 2021 07:35:57: 14000000 INFO @ Sat, 03 Apr 2021 07:35:59: 9000000 INFO @ Sat, 03 Apr 2021 07:35:59: 2000000 INFO @ Sat, 03 Apr 2021 07:36:02: 15000000 INFO @ Sat, 03 Apr 2021 07:36:03: 10000000 INFO @ Sat, 03 Apr 2021 07:36:03: 3000000 INFO @ Sat, 03 Apr 2021 07:36:07: 16000000 INFO @ Sat, 03 Apr 2021 07:36:07: 11000000 INFO @ Sat, 03 Apr 2021 07:36:08: 4000000 INFO @ Sat, 03 Apr 2021 07:36:12: 12000000 INFO @ Sat, 03 Apr 2021 07:36:12: 5000000 INFO @ Sat, 03 Apr 2021 07:36:12: 17000000 INFO @ Sat, 03 Apr 2021 07:36:16: 13000000 INFO @ Sat, 03 Apr 2021 07:36:16: 6000000 INFO @ Sat, 03 Apr 2021 07:36:17: 18000000 INFO @ Sat, 03 Apr 2021 07:36:20: 14000000 INFO @ Sat, 03 Apr 2021 07:36:21: 7000000 INFO @ Sat, 03 Apr 2021 07:36:21: 19000000 INFO @ Sat, 03 Apr 2021 07:36:25: 15000000 INFO @ Sat, 03 Apr 2021 07:36:25: 8000000 INFO @ Sat, 03 Apr 2021 07:36:26: 20000000 INFO @ Sat, 03 Apr 2021 07:36:29: 16000000 INFO @ Sat, 03 Apr 2021 07:36:29: 9000000 INFO @ Sat, 03 Apr 2021 07:36:31: 21000000 INFO @ Sat, 03 Apr 2021 07:36:33: 17000000 INFO @ Sat, 03 Apr 2021 07:36:34: 10000000 INFO @ Sat, 03 Apr 2021 07:36:36: 22000000 INFO @ Sat, 03 Apr 2021 07:36:38: 18000000 INFO @ Sat, 03 Apr 2021 07:36:38: 11000000 INFO @ Sat, 03 Apr 2021 07:36:40: 23000000 INFO @ Sat, 03 Apr 2021 07:36:42: 19000000 INFO @ Sat, 03 Apr 2021 07:36:42: 12000000 INFO @ Sat, 03 Apr 2021 07:36:45: 24000000 INFO @ Sat, 03 Apr 2021 07:36:46: 20000000 INFO @ Sat, 03 Apr 2021 07:36:47: 13000000 INFO @ Sat, 03 Apr 2021 07:36:50: 25000000 INFO @ Sat, 03 Apr 2021 07:36:50: 21000000 INFO @ Sat, 03 Apr 2021 07:36:51: 14000000 INFO @ Sat, 03 Apr 2021 07:36:55: 22000000 INFO @ Sat, 03 Apr 2021 07:36:55: 26000000 INFO @ Sat, 03 Apr 2021 07:36:55: 15000000 INFO @ Sat, 03 Apr 2021 07:36:59: 23000000 INFO @ Sat, 03 Apr 2021 07:37:00: 16000000 INFO @ Sat, 03 Apr 2021 07:37:00: 27000000 INFO @ Sat, 03 Apr 2021 07:37:03: 24000000 INFO @ Sat, 03 Apr 2021 07:37:04: 17000000 INFO @ Sat, 03 Apr 2021 07:37:05: 28000000 INFO @ Sat, 03 Apr 2021 07:37:08: 25000000 INFO @ Sat, 03 Apr 2021 07:37:08: 18000000 INFO @ Sat, 03 Apr 2021 07:37:10: 29000000 INFO @ Sat, 03 Apr 2021 07:37:12: 26000000 INFO @ Sat, 03 Apr 2021 07:37:12: 19000000 INFO @ Sat, 03 Apr 2021 07:37:15: 30000000 INFO @ Sat, 03 Apr 2021 07:37:16: 27000000 INFO @ Sat, 03 Apr 2021 07:37:17: 20000000 INFO @ Sat, 03 Apr 2021 07:37:20: 31000000 INFO @ Sat, 03 Apr 2021 07:37:20: 28000000 INFO @ Sat, 03 Apr 2021 07:37:21: 21000000 INFO @ Sat, 03 Apr 2021 07:37:25: 29000000 INFO @ Sat, 03 Apr 2021 07:37:25: 32000000 INFO @ Sat, 03 Apr 2021 07:37:25: 22000000 INFO @ Sat, 03 Apr 2021 07:37:29: 30000000 INFO @ Sat, 03 Apr 2021 07:37:30: 23000000 INFO @ Sat, 03 Apr 2021 07:37:30: 33000000 INFO @ Sat, 03 Apr 2021 07:37:33: 31000000 INFO @ Sat, 03 Apr 2021 07:37:34: 24000000 INFO @ Sat, 03 Apr 2021 07:37:35: 34000000 INFO @ Sat, 03 Apr 2021 07:37:38: 32000000 INFO @ Sat, 03 Apr 2021 07:37:38: 25000000 INFO @ Sat, 03 Apr 2021 07:37:40: 35000000 INFO @ Sat, 03 Apr 2021 07:37:42: 33000000 INFO @ Sat, 03 Apr 2021 07:37:42: 26000000 INFO @ Sat, 03 Apr 2021 07:37:45: 36000000 INFO @ Sat, 03 Apr 2021 07:37:46: 34000000 INFO @ Sat, 03 Apr 2021 07:37:47: 27000000 INFO @ Sat, 03 Apr 2021 07:37:50: 37000000 INFO @ Sat, 03 Apr 2021 07:37:50: 35000000 INFO @ Sat, 03 Apr 2021 07:37:51: 28000000 INFO @ Sat, 03 Apr 2021 07:37:54: 38000000 INFO @ Sat, 03 Apr 2021 07:37:55: 36000000 INFO @ Sat, 03 Apr 2021 07:37:55: 29000000 INFO @ Sat, 03 Apr 2021 07:37:59: 37000000 INFO @ Sat, 03 Apr 2021 07:37:59: 39000000 INFO @ Sat, 03 Apr 2021 07:37:59: 30000000 INFO @ Sat, 03 Apr 2021 07:38:03: 38000000 INFO @ Sat, 03 Apr 2021 07:38:04: 31000000 INFO @ Sat, 03 Apr 2021 07:38:04: 40000000 INFO @ Sat, 03 Apr 2021 07:38:07: 39000000 INFO @ Sat, 03 Apr 2021 07:38:08: 32000000 INFO @ Sat, 03 Apr 2021 07:38:09: 41000000 INFO @ Sat, 03 Apr 2021 07:38:12: 40000000 INFO @ Sat, 03 Apr 2021 07:38:12: 33000000 INFO @ Sat, 03 Apr 2021 07:38:14: 42000000 INFO @ Sat, 03 Apr 2021 07:38:16: 41000000 INFO @ Sat, 03 Apr 2021 07:38:17: 34000000 INFO @ Sat, 03 Apr 2021 07:38:19: 43000000 INFO @ Sat, 03 Apr 2021 07:38:20: 42000000 INFO @ Sat, 03 Apr 2021 07:38:21: 35000000 INFO @ Sat, 03 Apr 2021 07:38:24: 44000000 INFO @ Sat, 03 Apr 2021 07:38:25: 43000000 INFO @ Sat, 03 Apr 2021 07:38:25: 36000000 INFO @ Sat, 03 Apr 2021 07:38:29: 44000000 INFO @ Sat, 03 Apr 2021 07:38:29: 45000000 INFO @ Sat, 03 Apr 2021 07:38:29: 37000000 INFO @ Sat, 03 Apr 2021 07:38:33: 45000000 INFO @ Sat, 03 Apr 2021 07:38:33: 38000000 INFO @ Sat, 03 Apr 2021 07:38:34: 46000000 INFO @ Sat, 03 Apr 2021 07:38:37: 46000000 INFO @ Sat, 03 Apr 2021 07:38:38: 39000000 INFO @ Sat, 03 Apr 2021 07:38:39: 47000000 INFO @ Sat, 03 Apr 2021 07:38:42: 47000000 INFO @ Sat, 03 Apr 2021 07:38:42: 40000000 INFO @ Sat, 03 Apr 2021 07:38:44: 48000000 INFO @ Sat, 03 Apr 2021 07:38:46: 41000000 INFO @ Sat, 03 Apr 2021 07:38:46: 48000000 INFO @ Sat, 03 Apr 2021 07:38:49: 49000000 INFO @ Sat, 03 Apr 2021 07:38:50: 42000000 INFO @ Sat, 03 Apr 2021 07:38:51: 49000000 INFO @ Sat, 03 Apr 2021 07:38:55: 43000000 INFO @ Sat, 03 Apr 2021 07:38:55: 50000000 INFO @ Sat, 03 Apr 2021 07:38:55: 50000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sat, 03 Apr 2021 07:38:59: 44000000 INFO @ Sat, 03 Apr 2021 07:39:00: 51000000 INFO @ Sat, 03 Apr 2021 07:39:01: 51000000 INFO @ Sat, 03 Apr 2021 07:39:03: 45000000 INFO @ Sat, 03 Apr 2021 07:39:05: 52000000 INFO @ Sat, 03 Apr 2021 07:39:06: 52000000 INFO @ Sat, 03 Apr 2021 07:39:08: 46000000 INFO @ Sat, 03 Apr 2021 07:39:08: #1 tag size is determined as 47 bps INFO @ Sat, 03 Apr 2021 07:39:08: #1 tag size = 47 INFO @ Sat, 03 Apr 2021 07:39:08: #1 total tags in treatment: 23626882 INFO @ Sat, 03 Apr 2021 07:39:08: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 07:39:08: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 07:39:08: #1 tags after filtering in treatment: 14781259 INFO @ Sat, 03 Apr 2021 07:39:08: #1 Redundant rate of treatment: 0.37 INFO @ Sat, 03 Apr 2021 07:39:08: #1 finished! INFO @ Sat, 03 Apr 2021 07:39:08: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 07:39:08: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 07:39:09: #1 tag size is determined as 47 bps INFO @ Sat, 03 Apr 2021 07:39:09: #1 tag size = 47 INFO @ Sat, 03 Apr 2021 07:39:09: #1 total tags in treatment: 23626882 INFO @ Sat, 03 Apr 2021 07:39:09: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 07:39:09: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 07:39:09: #2 number of paired peaks: 327 WARNING @ Sat, 03 Apr 2021 07:39:09: Fewer paired peaks (327) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 327 pairs to build model! INFO @ Sat, 03 Apr 2021 07:39:09: start model_add_line... INFO @ Sat, 03 Apr 2021 07:39:09: #1 tags after filtering in treatment: 14781259 INFO @ Sat, 03 Apr 2021 07:39:09: #1 Redundant rate of treatment: 0.37 INFO @ Sat, 03 Apr 2021 07:39:09: #1 finished! INFO @ Sat, 03 Apr 2021 07:39:09: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 07:39:09: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 07:39:09: start X-correlation... INFO @ Sat, 03 Apr 2021 07:39:09: end of X-cor INFO @ Sat, 03 Apr 2021 07:39:09: #2 finished! INFO @ Sat, 03 Apr 2021 07:39:09: #2 predicted fragment length is 67 bps INFO @ Sat, 03 Apr 2021 07:39:09: #2 alternative fragment length(s) may be 67 bps INFO @ Sat, 03 Apr 2021 07:39:09: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX4082384/SRX4082384.05_model.r WARNING @ Sat, 03 Apr 2021 07:39:09: #2 Since the d (67) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 07:39:09: #2 You may need to consider one of the other alternative d(s): 67 WARNING @ Sat, 03 Apr 2021 07:39:09: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 07:39:09: #3 Call peaks... INFO @ Sat, 03 Apr 2021 07:39:09: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 07:39:10: #2 number of paired peaks: 327 WARNING @ Sat, 03 Apr 2021 07:39:10: Fewer paired peaks (327) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 327 pairs to build model! INFO @ Sat, 03 Apr 2021 07:39:10: start model_add_line... INFO @ Sat, 03 Apr 2021 07:39:10: start X-correlation... INFO @ Sat, 03 Apr 2021 07:39:10: end of X-cor INFO @ Sat, 03 Apr 2021 07:39:10: #2 finished! INFO @ Sat, 03 Apr 2021 07:39:10: #2 predicted fragment length is 67 bps INFO @ Sat, 03 Apr 2021 07:39:10: #2 alternative fragment length(s) may be 67 bps INFO @ Sat, 03 Apr 2021 07:39:10: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX4082384/SRX4082384.10_model.r WARNING @ Sat, 03 Apr 2021 07:39:10: #2 Since the d (67) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 07:39:10: #2 You may need to consider one of the other alternative d(s): 67 WARNING @ Sat, 03 Apr 2021 07:39:10: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 07:39:10: #3 Call peaks... INFO @ Sat, 03 Apr 2021 07:39:10: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 07:39:12: 47000000 INFO @ Sat, 03 Apr 2021 07:39:16: 48000000 INFO @ Sat, 03 Apr 2021 07:39:20: 49000000 INFO @ Sat, 03 Apr 2021 07:39:24: 50000000 INFO @ Sat, 03 Apr 2021 07:39:28: 51000000 INFO @ Sat, 03 Apr 2021 07:39:32: 52000000 INFO @ Sat, 03 Apr 2021 07:39:35: #1 tag size is determined as 47 bps INFO @ Sat, 03 Apr 2021 07:39:35: #1 tag size = 47 INFO @ Sat, 03 Apr 2021 07:39:35: #1 total tags in treatment: 23626882 INFO @ Sat, 03 Apr 2021 07:39:35: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 07:39:35: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 07:39:36: #1 tags after filtering in treatment: 14781259 INFO @ Sat, 03 Apr 2021 07:39:36: #1 Redundant rate of treatment: 0.37 INFO @ Sat, 03 Apr 2021 07:39:36: #1 finished! INFO @ Sat, 03 Apr 2021 07:39:36: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 07:39:36: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 07:39:37: #2 number of paired peaks: 327 WARNING @ Sat, 03 Apr 2021 07:39:37: Fewer paired peaks (327) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 327 pairs to build model! INFO @ Sat, 03 Apr 2021 07:39:37: start model_add_line... INFO @ Sat, 03 Apr 2021 07:39:37: start X-correlation... INFO @ Sat, 03 Apr 2021 07:39:37: end of X-cor INFO @ Sat, 03 Apr 2021 07:39:37: #2 finished! INFO @ Sat, 03 Apr 2021 07:39:37: #2 predicted fragment length is 67 bps INFO @ Sat, 03 Apr 2021 07:39:37: #2 alternative fragment length(s) may be 67 bps INFO @ Sat, 03 Apr 2021 07:39:37: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX4082384/SRX4082384.20_model.r WARNING @ Sat, 03 Apr 2021 07:39:37: #2 Since the d (67) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 07:39:37: #2 You may need to consider one of the other alternative d(s): 67 WARNING @ Sat, 03 Apr 2021 07:39:37: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 07:39:37: #3 Call peaks... INFO @ Sat, 03 Apr 2021 07:39:37: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 07:39:37: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 07:39:38: #3 Call peaks for each chromosome... BigWig に変換しました。 INFO @ Sat, 03 Apr 2021 07:39:51: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX4082384/SRX4082384.05_peaks.xls INFO @ Sat, 03 Apr 2021 07:39:51: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX4082384/SRX4082384.05_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 07:39:51: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX4082384/SRX4082384.05_summits.bed INFO @ Sat, 03 Apr 2021 07:39:51: Done! pass1 - making usageList (7 chroms): 2 millis pass2 - checking and writing primary data (7970 records, 4 fields): 9 millis CompletedMACS2peakCalling INFO @ Sat, 03 Apr 2021 07:39:52: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX4082384/SRX4082384.10_peaks.xls INFO @ Sat, 03 Apr 2021 07:39:52: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX4082384/SRX4082384.10_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 07:39:52: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX4082384/SRX4082384.10_summits.bed INFO @ Sat, 03 Apr 2021 07:39:52: Done! pass1 - making usageList (6 chroms): 1 millis pass2 - checking and writing primary data (4556 records, 4 fields): 6 millis CompletedMACS2peakCalling INFO @ Sat, 03 Apr 2021 07:40:05: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 07:40:19: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX4082384/SRX4082384.20_peaks.xls INFO @ Sat, 03 Apr 2021 07:40:19: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX4082384/SRX4082384.20_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 07:40:19: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX4082384/SRX4082384.20_summits.bed INFO @ Sat, 03 Apr 2021 07:40:19: Done! pass1 - making usageList (6 chroms): 1 millis pass2 - checking and writing primary data (1910 records, 4 fields): 3 millis CompletedMACS2peakCalling