Job ID = 6367717 SRX = SRX4029333 Genome = ce11 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2020-06-15T23:42:29 prefetch.2.10.7: 1) Downloading 'SRR7100993'... 2020-06-15T23:42:29 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:53:38 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:53:38 prefetch.2.10.7: 1) 'SRR7100993' was downloaded successfully 2020-06-15T23:53:38 prefetch.2.10.7: 'SRR7100993' has 0 unresolved dependencies Read 29580588 spots for SRR7100993/SRR7100993.sra Written 29580588 spots for SRR7100993/SRR7100993.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:31:39 29580588 reads; of these: 29580588 (100.00%) were paired; of these: 5941234 (20.08%) aligned concordantly 0 times 21497776 (72.68%) aligned concordantly exactly 1 time 2141578 (7.24%) aligned concordantly >1 times ---- 5941234 pairs aligned concordantly 0 times; of these: 1880783 (31.66%) aligned discordantly 1 time ---- 4060451 pairs aligned 0 times concordantly or discordantly; of these: 8120902 mates make up the pairs; of these: 6900749 (84.98%) aligned 0 times 799719 (9.85%) aligned exactly 1 time 420434 (5.18%) aligned >1 times 88.34% overall alignment rate Time searching: 00:31:39 Overall time: 00:31:39 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 24 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 3114959 / 25497544 = 0.1222 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 09:45:42: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX4029333/SRX4029333.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX4029333/SRX4029333.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX4029333/SRX4029333.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX4029333/SRX4029333.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 09:45:42: #1 read tag files... INFO @ Tue, 16 Jun 2020 09:45:42: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 09:45:48: 1000000 INFO @ Tue, 16 Jun 2020 09:45:54: 2000000 INFO @ Tue, 16 Jun 2020 09:45:59: 3000000 INFO @ Tue, 16 Jun 2020 09:46:05: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 09:46:11: 5000000 INFO @ Tue, 16 Jun 2020 09:46:12: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX4029333/SRX4029333.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX4029333/SRX4029333.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX4029333/SRX4029333.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX4029333/SRX4029333.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 09:46:12: #1 read tag files... INFO @ Tue, 16 Jun 2020 09:46:12: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 09:46:17: 6000000 INFO @ Tue, 16 Jun 2020 09:46:18: 1000000 INFO @ Tue, 16 Jun 2020 09:46:24: 7000000 INFO @ Tue, 16 Jun 2020 09:46:25: 2000000 INFO @ Tue, 16 Jun 2020 09:46:30: 8000000 INFO @ Tue, 16 Jun 2020 09:46:32: 3000000 INFO @ Tue, 16 Jun 2020 09:46:37: 9000000 INFO @ Tue, 16 Jun 2020 09:46:39: 4000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 09:46:42: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX4029333/SRX4029333.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX4029333/SRX4029333.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX4029333/SRX4029333.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX4029333/SRX4029333.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 09:46:42: #1 read tag files... INFO @ Tue, 16 Jun 2020 09:46:42: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 09:46:44: 10000000 INFO @ Tue, 16 Jun 2020 09:46:45: 5000000 INFO @ Tue, 16 Jun 2020 09:46:49: 1000000 INFO @ Tue, 16 Jun 2020 09:46:51: 11000000 INFO @ Tue, 16 Jun 2020 09:46:52: 6000000 INFO @ Tue, 16 Jun 2020 09:46:56: 2000000 INFO @ Tue, 16 Jun 2020 09:46:58: 12000000 INFO @ Tue, 16 Jun 2020 09:46:59: 7000000 INFO @ Tue, 16 Jun 2020 09:47:02: 3000000 INFO @ Tue, 16 Jun 2020 09:47:04: 13000000 INFO @ Tue, 16 Jun 2020 09:47:06: 8000000 INFO @ Tue, 16 Jun 2020 09:47:09: 4000000 INFO @ Tue, 16 Jun 2020 09:47:11: 14000000 INFO @ Tue, 16 Jun 2020 09:47:13: 9000000 INFO @ Tue, 16 Jun 2020 09:47:15: 5000000 INFO @ Tue, 16 Jun 2020 09:47:18: 15000000 INFO @ Tue, 16 Jun 2020 09:47:20: 10000000 INFO @ Tue, 16 Jun 2020 09:47:22: 6000000 INFO @ Tue, 16 Jun 2020 09:47:25: 16000000 INFO @ Tue, 16 Jun 2020 09:47:27: 11000000 INFO @ Tue, 16 Jun 2020 09:47:29: 7000000 INFO @ Tue, 16 Jun 2020 09:47:31: 17000000 INFO @ Tue, 16 Jun 2020 09:47:33: 12000000 INFO @ Tue, 16 Jun 2020 09:47:35: 8000000 INFO @ Tue, 16 Jun 2020 09:47:38: 18000000 INFO @ Tue, 16 Jun 2020 09:47:40: 13000000 INFO @ Tue, 16 Jun 2020 09:47:42: 9000000 INFO @ Tue, 16 Jun 2020 09:47:45: 19000000 INFO @ Tue, 16 Jun 2020 09:47:47: 14000000 INFO @ Tue, 16 Jun 2020 09:47:48: 10000000 INFO @ Tue, 16 Jun 2020 09:47:52: 20000000 INFO @ Tue, 16 Jun 2020 09:47:54: 15000000 INFO @ Tue, 16 Jun 2020 09:47:55: 11000000 INFO @ Tue, 16 Jun 2020 09:47:58: 21000000 INFO @ Tue, 16 Jun 2020 09:48:00: 16000000 INFO @ Tue, 16 Jun 2020 09:48:01: 12000000 INFO @ Tue, 16 Jun 2020 09:48:05: 22000000 INFO @ Tue, 16 Jun 2020 09:48:07: 17000000 INFO @ Tue, 16 Jun 2020 09:48:08: 13000000 INFO @ Tue, 16 Jun 2020 09:48:11: 23000000 INFO @ Tue, 16 Jun 2020 09:48:13: 18000000 INFO @ Tue, 16 Jun 2020 09:48:14: 14000000 INFO @ Tue, 16 Jun 2020 09:48:18: 24000000 INFO @ Tue, 16 Jun 2020 09:48:20: 19000000 INFO @ Tue, 16 Jun 2020 09:48:21: 15000000 INFO @ Tue, 16 Jun 2020 09:48:25: 25000000 INFO @ Tue, 16 Jun 2020 09:48:27: 20000000 INFO @ Tue, 16 Jun 2020 09:48:27: 16000000 INFO @ Tue, 16 Jun 2020 09:48:32: 26000000 INFO @ Tue, 16 Jun 2020 09:48:33: 21000000 INFO @ Tue, 16 Jun 2020 09:48:34: 17000000 INFO @ Tue, 16 Jun 2020 09:48:38: 27000000 INFO @ Tue, 16 Jun 2020 09:48:40: 22000000 INFO @ Tue, 16 Jun 2020 09:48:40: 18000000 INFO @ Tue, 16 Jun 2020 09:48:45: 28000000 INFO @ Tue, 16 Jun 2020 09:48:46: 19000000 INFO @ Tue, 16 Jun 2020 09:48:47: 23000000 INFO @ Tue, 16 Jun 2020 09:48:52: 29000000 INFO @ Tue, 16 Jun 2020 09:48:53: 20000000 INFO @ Tue, 16 Jun 2020 09:48:53: 24000000 INFO @ Tue, 16 Jun 2020 09:48:58: 30000000 INFO @ Tue, 16 Jun 2020 09:48:59: 21000000 INFO @ Tue, 16 Jun 2020 09:49:00: 25000000 INFO @ Tue, 16 Jun 2020 09:49:05: 31000000 INFO @ Tue, 16 Jun 2020 09:49:06: 22000000 INFO @ Tue, 16 Jun 2020 09:49:06: 26000000 INFO @ Tue, 16 Jun 2020 09:49:12: 32000000 INFO @ Tue, 16 Jun 2020 09:49:12: 23000000 INFO @ Tue, 16 Jun 2020 09:49:13: 27000000 INFO @ Tue, 16 Jun 2020 09:49:18: 33000000 INFO @ Tue, 16 Jun 2020 09:49:18: 24000000 INFO @ Tue, 16 Jun 2020 09:49:20: 28000000 INFO @ Tue, 16 Jun 2020 09:49:25: 34000000 INFO @ Tue, 16 Jun 2020 09:49:25: 25000000 INFO @ Tue, 16 Jun 2020 09:49:26: 29000000 INFO @ Tue, 16 Jun 2020 09:49:31: 26000000 INFO @ Tue, 16 Jun 2020 09:49:31: 35000000 INFO @ Tue, 16 Jun 2020 09:49:33: 30000000 INFO @ Tue, 16 Jun 2020 09:49:38: 27000000 INFO @ Tue, 16 Jun 2020 09:49:38: 36000000 INFO @ Tue, 16 Jun 2020 09:49:39: 31000000 INFO @ Tue, 16 Jun 2020 09:49:44: 28000000 INFO @ Tue, 16 Jun 2020 09:49:45: 37000000 INFO @ Tue, 16 Jun 2020 09:49:46: 32000000 INFO @ Tue, 16 Jun 2020 09:49:50: 29000000 INFO @ Tue, 16 Jun 2020 09:49:51: 38000000 INFO @ Tue, 16 Jun 2020 09:49:53: 33000000 INFO @ Tue, 16 Jun 2020 09:49:57: 30000000 INFO @ Tue, 16 Jun 2020 09:49:58: 39000000 INFO @ Tue, 16 Jun 2020 09:49:59: 34000000 INFO @ Tue, 16 Jun 2020 09:50:03: 31000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 16 Jun 2020 09:50:05: 40000000 INFO @ Tue, 16 Jun 2020 09:50:06: 35000000 INFO @ Tue, 16 Jun 2020 09:50:10: 32000000 INFO @ Tue, 16 Jun 2020 09:50:11: 41000000 INFO @ Tue, 16 Jun 2020 09:50:13: 36000000 INFO @ Tue, 16 Jun 2020 09:50:16: 33000000 INFO @ Tue, 16 Jun 2020 09:50:18: 42000000 INFO @ Tue, 16 Jun 2020 09:50:19: 37000000 INFO @ Tue, 16 Jun 2020 09:50:22: 34000000 INFO @ Tue, 16 Jun 2020 09:50:24: 43000000 INFO @ Tue, 16 Jun 2020 09:50:26: 38000000 INFO @ Tue, 16 Jun 2020 09:50:29: 35000000 INFO @ Tue, 16 Jun 2020 09:50:31: 44000000 INFO @ Tue, 16 Jun 2020 09:50:32: 39000000 INFO @ Tue, 16 Jun 2020 09:50:35: 36000000 INFO @ Tue, 16 Jun 2020 09:50:37: 45000000 INFO @ Tue, 16 Jun 2020 09:50:39: 40000000 INFO @ Tue, 16 Jun 2020 09:50:42: 37000000 INFO @ Tue, 16 Jun 2020 09:50:43: 46000000 INFO @ Tue, 16 Jun 2020 09:50:44: #1 tag size is determined as 76 bps INFO @ Tue, 16 Jun 2020 09:50:44: #1 tag size = 76 INFO @ Tue, 16 Jun 2020 09:50:44: #1 total tags in treatment: 20622060 INFO @ Tue, 16 Jun 2020 09:50:44: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 09:50:44: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 09:50:44: #1 tags after filtering in treatment: 17493703 INFO @ Tue, 16 Jun 2020 09:50:44: #1 Redundant rate of treatment: 0.15 INFO @ Tue, 16 Jun 2020 09:50:44: #1 finished! INFO @ Tue, 16 Jun 2020 09:50:44: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 09:50:44: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 09:50:45: #2 number of paired peaks: 240 WARNING @ Tue, 16 Jun 2020 09:50:45: Fewer paired peaks (240) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 240 pairs to build model! INFO @ Tue, 16 Jun 2020 09:50:45: start model_add_line... INFO @ Tue, 16 Jun 2020 09:50:45: start X-correlation... INFO @ Tue, 16 Jun 2020 09:50:45: end of X-cor INFO @ Tue, 16 Jun 2020 09:50:45: #2 finished! INFO @ Tue, 16 Jun 2020 09:50:45: #2 predicted fragment length is 155 bps INFO @ Tue, 16 Jun 2020 09:50:45: #2 alternative fragment length(s) may be 4,155 bps INFO @ Tue, 16 Jun 2020 09:50:45: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX4029333/SRX4029333.05_model.r INFO @ Tue, 16 Jun 2020 09:50:45: #3 Call peaks... INFO @ Tue, 16 Jun 2020 09:50:45: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 16 Jun 2020 09:50:45: 41000000 INFO @ Tue, 16 Jun 2020 09:50:48: 38000000 INFO @ Tue, 16 Jun 2020 09:50:51: 42000000 INFO @ Tue, 16 Jun 2020 09:50:54: 39000000 INFO @ Tue, 16 Jun 2020 09:50:58: 43000000 INFO @ Tue, 16 Jun 2020 09:51:01: 40000000 INFO @ Tue, 16 Jun 2020 09:51:04: 44000000 INFO @ Tue, 16 Jun 2020 09:51:07: 41000000 INFO @ Tue, 16 Jun 2020 09:51:10: 45000000 BigWig に変換しました。 INFO @ Tue, 16 Jun 2020 09:51:14: 42000000 INFO @ Tue, 16 Jun 2020 09:51:15: #3 Call peaks for each chromosome... INFO @ Tue, 16 Jun 2020 09:51:16: 46000000 INFO @ Tue, 16 Jun 2020 09:51:16: #1 tag size is determined as 76 bps INFO @ Tue, 16 Jun 2020 09:51:16: #1 tag size = 76 INFO @ Tue, 16 Jun 2020 09:51:16: #1 total tags in treatment: 20622060 INFO @ Tue, 16 Jun 2020 09:51:16: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 09:51:16: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 09:51:17: #1 tags after filtering in treatment: 17493703 INFO @ Tue, 16 Jun 2020 09:51:17: #1 Redundant rate of treatment: 0.15 INFO @ Tue, 16 Jun 2020 09:51:17: #1 finished! INFO @ Tue, 16 Jun 2020 09:51:17: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 09:51:17: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 09:51:18: #2 number of paired peaks: 240 WARNING @ Tue, 16 Jun 2020 09:51:18: Fewer paired peaks (240) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 240 pairs to build model! INFO @ Tue, 16 Jun 2020 09:51:18: start model_add_line... INFO @ Tue, 16 Jun 2020 09:51:18: start X-correlation... INFO @ Tue, 16 Jun 2020 09:51:18: end of X-cor INFO @ Tue, 16 Jun 2020 09:51:18: #2 finished! INFO @ Tue, 16 Jun 2020 09:51:18: #2 predicted fragment length is 155 bps INFO @ Tue, 16 Jun 2020 09:51:18: #2 alternative fragment length(s) may be 4,155 bps INFO @ Tue, 16 Jun 2020 09:51:18: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX4029333/SRX4029333.10_model.r INFO @ Tue, 16 Jun 2020 09:51:18: #3 Call peaks... INFO @ Tue, 16 Jun 2020 09:51:18: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 16 Jun 2020 09:51:20: 43000000 INFO @ Tue, 16 Jun 2020 09:51:26: 44000000 INFO @ Tue, 16 Jun 2020 09:51:30: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX4029333/SRX4029333.05_peaks.xls INFO @ Tue, 16 Jun 2020 09:51:30: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX4029333/SRX4029333.05_peaks.narrowPeak INFO @ Tue, 16 Jun 2020 09:51:30: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX4029333/SRX4029333.05_summits.bed INFO @ Tue, 16 Jun 2020 09:51:30: Done! pass1 - making usageList (7 chroms): 1 millis pass2 - checking and writing primary data (423 records, 4 fields): 1 millis CompletedMACS2peakCalling INFO @ Tue, 16 Jun 2020 09:51:32: 45000000 INFO @ Tue, 16 Jun 2020 09:51:37: 46000000 INFO @ Tue, 16 Jun 2020 09:51:38: #1 tag size is determined as 76 bps INFO @ Tue, 16 Jun 2020 09:51:38: #1 tag size = 76 INFO @ Tue, 16 Jun 2020 09:51:38: #1 total tags in treatment: 20622060 INFO @ Tue, 16 Jun 2020 09:51:38: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 09:51:38: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 09:51:38: #1 tags after filtering in treatment: 17493703 INFO @ Tue, 16 Jun 2020 09:51:38: #1 Redundant rate of treatment: 0.15 INFO @ Tue, 16 Jun 2020 09:51:38: #1 finished! INFO @ Tue, 16 Jun 2020 09:51:38: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 09:51:38: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 09:51:39: #2 number of paired peaks: 240 WARNING @ Tue, 16 Jun 2020 09:51:39: Fewer paired peaks (240) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 240 pairs to build model! INFO @ Tue, 16 Jun 2020 09:51:39: start model_add_line... INFO @ Tue, 16 Jun 2020 09:51:39: start X-correlation... INFO @ Tue, 16 Jun 2020 09:51:39: end of X-cor INFO @ Tue, 16 Jun 2020 09:51:39: #2 finished! INFO @ Tue, 16 Jun 2020 09:51:39: #2 predicted fragment length is 155 bps INFO @ Tue, 16 Jun 2020 09:51:39: #2 alternative fragment length(s) may be 4,155 bps INFO @ Tue, 16 Jun 2020 09:51:39: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX4029333/SRX4029333.20_model.r INFO @ Tue, 16 Jun 2020 09:51:39: #3 Call peaks... INFO @ Tue, 16 Jun 2020 09:51:39: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 16 Jun 2020 09:51:48: #3 Call peaks for each chromosome... INFO @ Tue, 16 Jun 2020 09:52:02: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX4029333/SRX4029333.10_peaks.xls INFO @ Tue, 16 Jun 2020 09:52:02: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX4029333/SRX4029333.10_peaks.narrowPeak INFO @ Tue, 16 Jun 2020 09:52:02: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX4029333/SRX4029333.10_summits.bed INFO @ Tue, 16 Jun 2020 09:52:02: Done! pass1 - making usageList (7 chroms): 0 millis pass2 - checking and writing primary data (325 records, 4 fields): 1 millis CompletedMACS2peakCalling INFO @ Tue, 16 Jun 2020 09:52:09: #3 Call peaks for each chromosome... INFO @ Tue, 16 Jun 2020 09:52:23: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX4029333/SRX4029333.20_peaks.xls INFO @ Tue, 16 Jun 2020 09:52:23: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX4029333/SRX4029333.20_peaks.narrowPeak INFO @ Tue, 16 Jun 2020 09:52:23: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX4029333/SRX4029333.20_summits.bed INFO @ Tue, 16 Jun 2020 09:52:23: Done! pass1 - making usageList (7 chroms): 1 millis pass2 - checking and writing primary data (219 records, 4 fields): 1 millis CompletedMACS2peakCalling