Job ID = 6367713 SRX = SRX4012477 Genome = ce11 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2020-06-15T23:36:14 prefetch.2.10.7: 1) Downloading 'SRR7082718'... 2020-06-15T23:36:14 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:54:20 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:54:20 prefetch.2.10.7: 1) 'SRR7082718' was downloaded successfully Read 40853794 spots for SRR7082718/SRR7082718.sra Written 40853794 spots for SRR7082718/SRR7082718.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:50:22 40853794 reads; of these: 40853794 (100.00%) were paired; of these: 1709660 (4.18%) aligned concordantly 0 times 33679442 (82.44%) aligned concordantly exactly 1 time 5464692 (13.38%) aligned concordantly >1 times ---- 1709660 pairs aligned concordantly 0 times; of these: 696173 (40.72%) aligned discordantly 1 time ---- 1013487 pairs aligned 0 times concordantly or discordantly; of these: 2026974 mates make up the pairs; of these: 794262 (39.18%) aligned 0 times 724209 (35.73%) aligned exactly 1 time 508503 (25.09%) aligned >1 times 99.03% overall alignment rate Time searching: 00:50:22 Overall time: 00:50:22 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 36 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 1732037 / 39274612 = 0.0441 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 10:22:09: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX4012477/SRX4012477.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX4012477/SRX4012477.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX4012477/SRX4012477.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX4012477/SRX4012477.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 10:22:09: #1 read tag files... INFO @ Tue, 16 Jun 2020 10:22:09: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 10:22:17: 1000000 INFO @ Tue, 16 Jun 2020 10:22:24: 2000000 INFO @ Tue, 16 Jun 2020 10:22:32: 3000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 10:22:39: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX4012477/SRX4012477.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX4012477/SRX4012477.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX4012477/SRX4012477.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX4012477/SRX4012477.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 10:22:39: #1 read tag files... INFO @ Tue, 16 Jun 2020 10:22:39: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 10:22:39: 4000000 INFO @ Tue, 16 Jun 2020 10:22:47: 1000000 INFO @ Tue, 16 Jun 2020 10:22:47: 5000000 INFO @ Tue, 16 Jun 2020 10:22:55: 6000000 INFO @ Tue, 16 Jun 2020 10:22:55: 2000000 INFO @ Tue, 16 Jun 2020 10:23:03: 7000000 INFO @ Tue, 16 Jun 2020 10:23:03: 3000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 10:23:09: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX4012477/SRX4012477.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX4012477/SRX4012477.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX4012477/SRX4012477.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX4012477/SRX4012477.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 10:23:09: #1 read tag files... INFO @ Tue, 16 Jun 2020 10:23:09: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 10:23:11: 8000000 INFO @ Tue, 16 Jun 2020 10:23:12: 4000000 INFO @ Tue, 16 Jun 2020 10:23:18: 1000000 INFO @ Tue, 16 Jun 2020 10:23:19: 9000000 INFO @ Tue, 16 Jun 2020 10:23:21: 5000000 INFO @ Tue, 16 Jun 2020 10:23:26: 2000000 INFO @ Tue, 16 Jun 2020 10:23:27: 10000000 INFO @ Tue, 16 Jun 2020 10:23:31: 6000000 INFO @ Tue, 16 Jun 2020 10:23:35: 3000000 INFO @ Tue, 16 Jun 2020 10:23:35: 11000000 INFO @ Tue, 16 Jun 2020 10:23:40: 7000000 INFO @ Tue, 16 Jun 2020 10:23:43: 4000000 INFO @ Tue, 16 Jun 2020 10:23:43: 12000000 INFO @ Tue, 16 Jun 2020 10:23:49: 8000000 INFO @ Tue, 16 Jun 2020 10:23:51: 5000000 INFO @ Tue, 16 Jun 2020 10:23:51: 13000000 INFO @ Tue, 16 Jun 2020 10:23:58: 9000000 INFO @ Tue, 16 Jun 2020 10:23:59: 6000000 INFO @ Tue, 16 Jun 2020 10:24:00: 14000000 INFO @ Tue, 16 Jun 2020 10:24:07: 7000000 INFO @ Tue, 16 Jun 2020 10:24:07: 10000000 INFO @ Tue, 16 Jun 2020 10:24:08: 15000000 INFO @ Tue, 16 Jun 2020 10:24:15: 8000000 INFO @ Tue, 16 Jun 2020 10:24:16: 16000000 INFO @ Tue, 16 Jun 2020 10:24:16: 11000000 INFO @ Tue, 16 Jun 2020 10:24:23: 9000000 INFO @ Tue, 16 Jun 2020 10:24:25: 17000000 INFO @ Tue, 16 Jun 2020 10:24:26: 12000000 INFO @ Tue, 16 Jun 2020 10:24:32: 10000000 INFO @ Tue, 16 Jun 2020 10:24:33: 18000000 INFO @ Tue, 16 Jun 2020 10:24:35: 13000000 INFO @ Tue, 16 Jun 2020 10:24:40: 11000000 INFO @ Tue, 16 Jun 2020 10:24:41: 19000000 INFO @ Tue, 16 Jun 2020 10:24:44: 14000000 INFO @ Tue, 16 Jun 2020 10:24:48: 12000000 INFO @ Tue, 16 Jun 2020 10:24:50: 20000000 INFO @ Tue, 16 Jun 2020 10:24:53: 15000000 INFO @ Tue, 16 Jun 2020 10:24:56: 13000000 INFO @ Tue, 16 Jun 2020 10:24:58: 21000000 INFO @ Tue, 16 Jun 2020 10:25:03: 16000000 INFO @ Tue, 16 Jun 2020 10:25:04: 14000000 INFO @ Tue, 16 Jun 2020 10:25:06: 22000000 INFO @ Tue, 16 Jun 2020 10:25:12: 17000000 INFO @ Tue, 16 Jun 2020 10:25:12: 15000000 INFO @ Tue, 16 Jun 2020 10:25:15: 23000000 INFO @ Tue, 16 Jun 2020 10:25:20: 16000000 INFO @ Tue, 16 Jun 2020 10:25:21: 18000000 INFO @ Tue, 16 Jun 2020 10:25:23: 24000000 INFO @ Tue, 16 Jun 2020 10:25:28: 17000000 INFO @ Tue, 16 Jun 2020 10:25:30: 19000000 INFO @ Tue, 16 Jun 2020 10:25:32: 25000000 INFO @ Tue, 16 Jun 2020 10:25:36: 18000000 INFO @ Tue, 16 Jun 2020 10:25:40: 20000000 INFO @ Tue, 16 Jun 2020 10:25:40: 26000000 INFO @ Tue, 16 Jun 2020 10:25:44: 19000000 INFO @ Tue, 16 Jun 2020 10:25:48: 27000000 INFO @ Tue, 16 Jun 2020 10:25:49: 21000000 INFO @ Tue, 16 Jun 2020 10:25:52: 20000000 INFO @ Tue, 16 Jun 2020 10:25:57: 28000000 INFO @ Tue, 16 Jun 2020 10:25:59: 22000000 INFO @ Tue, 16 Jun 2020 10:26:00: 21000000 INFO @ Tue, 16 Jun 2020 10:26:06: 29000000 INFO @ Tue, 16 Jun 2020 10:26:08: 23000000 INFO @ Tue, 16 Jun 2020 10:26:08: 22000000 INFO @ Tue, 16 Jun 2020 10:26:15: 30000000 INFO @ Tue, 16 Jun 2020 10:26:16: 23000000 INFO @ Tue, 16 Jun 2020 10:26:17: 24000000 INFO @ Tue, 16 Jun 2020 10:26:24: 31000000 INFO @ Tue, 16 Jun 2020 10:26:25: 24000000 INFO @ Tue, 16 Jun 2020 10:26:27: 25000000 INFO @ Tue, 16 Jun 2020 10:26:33: 25000000 INFO @ Tue, 16 Jun 2020 10:26:33: 32000000 INFO @ Tue, 16 Jun 2020 10:26:36: 26000000 INFO @ Tue, 16 Jun 2020 10:26:41: 26000000 INFO @ Tue, 16 Jun 2020 10:26:42: 33000000 INFO @ Tue, 16 Jun 2020 10:26:45: 27000000 INFO @ Tue, 16 Jun 2020 10:26:49: 27000000 INFO @ Tue, 16 Jun 2020 10:26:51: 34000000 INFO @ Tue, 16 Jun 2020 10:26:55: 28000000 INFO @ Tue, 16 Jun 2020 10:26:57: 28000000 INFO @ Tue, 16 Jun 2020 10:27:00: 35000000 INFO @ Tue, 16 Jun 2020 10:27:03: 29000000 INFO @ Tue, 16 Jun 2020 10:27:05: 29000000 INFO @ Tue, 16 Jun 2020 10:27:08: 36000000 INFO @ Tue, 16 Jun 2020 10:27:11: 30000000 INFO @ Tue, 16 Jun 2020 10:27:13: 30000000 INFO @ Tue, 16 Jun 2020 10:27:18: 37000000 INFO @ Tue, 16 Jun 2020 10:27:19: 31000000 INFO @ Tue, 16 Jun 2020 10:27:22: 31000000 INFO @ Tue, 16 Jun 2020 10:27:26: 38000000 INFO @ Tue, 16 Jun 2020 10:27:27: 32000000 INFO @ Tue, 16 Jun 2020 10:27:30: 32000000 INFO @ Tue, 16 Jun 2020 10:27:35: 39000000 INFO @ Tue, 16 Jun 2020 10:27:35: 33000000 INFO @ Tue, 16 Jun 2020 10:27:39: 33000000 INFO @ Tue, 16 Jun 2020 10:27:43: 34000000 INFO @ Tue, 16 Jun 2020 10:27:43: 40000000 INFO @ Tue, 16 Jun 2020 10:27:47: 34000000 INFO @ Tue, 16 Jun 2020 10:27:51: 35000000 INFO @ Tue, 16 Jun 2020 10:27:52: 41000000 INFO @ Tue, 16 Jun 2020 10:27:55: 35000000 INFO @ Tue, 16 Jun 2020 10:27:59: 36000000 INFO @ Tue, 16 Jun 2020 10:28:00: 42000000 INFO @ Tue, 16 Jun 2020 10:28:03: 36000000 INFO @ Tue, 16 Jun 2020 10:28:06: 37000000 INFO @ Tue, 16 Jun 2020 10:28:09: 43000000 INFO @ Tue, 16 Jun 2020 10:28:12: 37000000 INFO @ Tue, 16 Jun 2020 10:28:14: 38000000 INFO @ Tue, 16 Jun 2020 10:28:17: 44000000 INFO @ Tue, 16 Jun 2020 10:28:20: 38000000 INFO @ Tue, 16 Jun 2020 10:28:22: 39000000 INFO @ Tue, 16 Jun 2020 10:28:26: 45000000 INFO @ Tue, 16 Jun 2020 10:28:28: 39000000 INFO @ Tue, 16 Jun 2020 10:28:29: 40000000 INFO @ Tue, 16 Jun 2020 10:28:34: 46000000 INFO @ Tue, 16 Jun 2020 10:28:36: 40000000 INFO @ Tue, 16 Jun 2020 10:28:37: 41000000 INFO @ Tue, 16 Jun 2020 10:28:42: 47000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 16 Jun 2020 10:28:45: 41000000 INFO @ Tue, 16 Jun 2020 10:28:45: 42000000 INFO @ Tue, 16 Jun 2020 10:28:51: 48000000 INFO @ Tue, 16 Jun 2020 10:28:53: 43000000 INFO @ Tue, 16 Jun 2020 10:28:53: 42000000 INFO @ Tue, 16 Jun 2020 10:28:59: 49000000 INFO @ Tue, 16 Jun 2020 10:29:00: 44000000 INFO @ Tue, 16 Jun 2020 10:29:01: 43000000 INFO @ Tue, 16 Jun 2020 10:29:07: 50000000 INFO @ Tue, 16 Jun 2020 10:29:08: 45000000 INFO @ Tue, 16 Jun 2020 10:29:10: 44000000 INFO @ Tue, 16 Jun 2020 10:29:15: 51000000 INFO @ Tue, 16 Jun 2020 10:29:16: 46000000 INFO @ Tue, 16 Jun 2020 10:29:18: 45000000 INFO @ Tue, 16 Jun 2020 10:29:23: 52000000 INFO @ Tue, 16 Jun 2020 10:29:24: 47000000 INFO @ Tue, 16 Jun 2020 10:29:26: 46000000 INFO @ Tue, 16 Jun 2020 10:29:31: 48000000 INFO @ Tue, 16 Jun 2020 10:29:31: 53000000 INFO @ Tue, 16 Jun 2020 10:29:34: 47000000 INFO @ Tue, 16 Jun 2020 10:29:39: 49000000 INFO @ Tue, 16 Jun 2020 10:29:40: 54000000 INFO @ Tue, 16 Jun 2020 10:29:42: 48000000 INFO @ Tue, 16 Jun 2020 10:29:46: 50000000 INFO @ Tue, 16 Jun 2020 10:29:48: 55000000 INFO @ Tue, 16 Jun 2020 10:29:50: 49000000 INFO @ Tue, 16 Jun 2020 10:29:54: 51000000 INFO @ Tue, 16 Jun 2020 10:29:56: 56000000 INFO @ Tue, 16 Jun 2020 10:29:58: 50000000 INFO @ Tue, 16 Jun 2020 10:30:01: 52000000 INFO @ Tue, 16 Jun 2020 10:30:05: 57000000 INFO @ Tue, 16 Jun 2020 10:30:07: 51000000 INFO @ Tue, 16 Jun 2020 10:30:09: 53000000 INFO @ Tue, 16 Jun 2020 10:30:13: 58000000 INFO @ Tue, 16 Jun 2020 10:30:15: 52000000 BigWig に変換しました。 INFO @ Tue, 16 Jun 2020 10:30:17: 54000000 INFO @ Tue, 16 Jun 2020 10:30:21: 59000000 INFO @ Tue, 16 Jun 2020 10:30:23: 53000000 INFO @ Tue, 16 Jun 2020 10:30:24: 55000000 INFO @ Tue, 16 Jun 2020 10:30:30: 60000000 INFO @ Tue, 16 Jun 2020 10:30:32: 54000000 INFO @ Tue, 16 Jun 2020 10:30:32: 56000000 INFO @ Tue, 16 Jun 2020 10:30:38: 61000000 INFO @ Tue, 16 Jun 2020 10:30:40: 57000000 INFO @ Tue, 16 Jun 2020 10:30:40: 55000000 INFO @ Tue, 16 Jun 2020 10:30:46: 62000000 INFO @ Tue, 16 Jun 2020 10:30:48: 58000000 INFO @ Tue, 16 Jun 2020 10:30:48: 56000000 INFO @ Tue, 16 Jun 2020 10:30:53: 63000000 INFO @ Tue, 16 Jun 2020 10:30:55: 59000000 INFO @ Tue, 16 Jun 2020 10:30:56: 57000000 INFO @ Tue, 16 Jun 2020 10:31:02: 64000000 INFO @ Tue, 16 Jun 2020 10:31:03: 60000000 INFO @ Tue, 16 Jun 2020 10:31:04: 58000000 INFO @ Tue, 16 Jun 2020 10:31:11: 65000000 INFO @ Tue, 16 Jun 2020 10:31:12: 61000000 INFO @ Tue, 16 Jun 2020 10:31:13: 59000000 INFO @ Tue, 16 Jun 2020 10:31:19: 66000000 INFO @ Tue, 16 Jun 2020 10:31:21: 60000000 INFO @ Tue, 16 Jun 2020 10:31:21: 62000000 INFO @ Tue, 16 Jun 2020 10:31:28: 67000000 INFO @ Tue, 16 Jun 2020 10:31:29: 61000000 INFO @ Tue, 16 Jun 2020 10:31:30: 63000000 INFO @ Tue, 16 Jun 2020 10:31:36: 68000000 INFO @ Tue, 16 Jun 2020 10:31:37: 62000000 INFO @ Tue, 16 Jun 2020 10:31:38: 64000000 INFO @ Tue, 16 Jun 2020 10:31:44: 63000000 INFO @ Tue, 16 Jun 2020 10:31:45: 69000000 INFO @ Tue, 16 Jun 2020 10:31:46: 65000000 INFO @ Tue, 16 Jun 2020 10:31:53: 64000000 INFO @ Tue, 16 Jun 2020 10:31:53: 70000000 INFO @ Tue, 16 Jun 2020 10:31:54: 66000000 INFO @ Tue, 16 Jun 2020 10:32:02: 65000000 INFO @ Tue, 16 Jun 2020 10:32:02: 71000000 INFO @ Tue, 16 Jun 2020 10:32:02: 67000000 INFO @ Tue, 16 Jun 2020 10:32:10: 68000000 INFO @ Tue, 16 Jun 2020 10:32:10: 72000000 INFO @ Tue, 16 Jun 2020 10:32:11: 66000000 INFO @ Tue, 16 Jun 2020 10:32:18: 69000000 INFO @ Tue, 16 Jun 2020 10:32:19: 73000000 INFO @ Tue, 16 Jun 2020 10:32:20: 67000000 INFO @ Tue, 16 Jun 2020 10:32:26: 70000000 INFO @ Tue, 16 Jun 2020 10:32:27: 74000000 INFO @ Tue, 16 Jun 2020 10:32:28: 68000000 INFO @ Tue, 16 Jun 2020 10:32:34: 71000000 INFO @ Tue, 16 Jun 2020 10:32:36: 75000000 INFO @ Tue, 16 Jun 2020 10:32:37: 69000000 INFO @ Tue, 16 Jun 2020 10:32:42: 72000000 INFO @ Tue, 16 Jun 2020 10:32:45: 76000000 INFO @ Tue, 16 Jun 2020 10:32:46: 70000000 INFO @ Tue, 16 Jun 2020 10:32:49: 73000000 INFO @ Tue, 16 Jun 2020 10:32:54: 77000000 INFO @ Tue, 16 Jun 2020 10:32:55: 71000000 INFO @ Tue, 16 Jun 2020 10:32:57: 74000000 INFO @ Tue, 16 Jun 2020 10:32:58: #1 tag size is determined as 75 bps INFO @ Tue, 16 Jun 2020 10:32:58: #1 tag size = 75 INFO @ Tue, 16 Jun 2020 10:32:58: #1 total tags in treatment: 37417146 INFO @ Tue, 16 Jun 2020 10:32:58: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 10:32:58: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 10:32:58: #1 tags after filtering in treatment: 32316408 INFO @ Tue, 16 Jun 2020 10:32:58: #1 Redundant rate of treatment: 0.14 INFO @ Tue, 16 Jun 2020 10:32:58: #1 finished! INFO @ Tue, 16 Jun 2020 10:32:58: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 10:32:58: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 10:33:01: #2 number of paired peaks: 64 WARNING @ Tue, 16 Jun 2020 10:33:01: Too few paired peaks (64) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 16 Jun 2020 10:33:01: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce11/SRX4012477/SRX4012477.05_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4012477/SRX4012477.05_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4012477/SRX4012477.05_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4012477/SRX4012477.05_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Tue, 16 Jun 2020 10:33:03: 72000000 INFO @ Tue, 16 Jun 2020 10:33:05: 75000000 INFO @ Tue, 16 Jun 2020 10:33:12: 73000000 INFO @ Tue, 16 Jun 2020 10:33:13: 76000000 INFO @ Tue, 16 Jun 2020 10:33:20: 74000000 INFO @ Tue, 16 Jun 2020 10:33:21: 77000000 INFO @ Tue, 16 Jun 2020 10:33:25: #1 tag size is determined as 75 bps INFO @ Tue, 16 Jun 2020 10:33:25: #1 tag size = 75 INFO @ Tue, 16 Jun 2020 10:33:25: #1 total tags in treatment: 37417146 INFO @ Tue, 16 Jun 2020 10:33:25: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 10:33:25: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 10:33:25: #1 tags after filtering in treatment: 32316408 INFO @ Tue, 16 Jun 2020 10:33:25: #1 Redundant rate of treatment: 0.14 INFO @ Tue, 16 Jun 2020 10:33:25: #1 finished! INFO @ Tue, 16 Jun 2020 10:33:25: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 10:33:25: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 10:33:28: #2 number of paired peaks: 64 WARNING @ Tue, 16 Jun 2020 10:33:28: Too few paired peaks (64) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 16 Jun 2020 10:33:28: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce11/SRX4012477/SRX4012477.10_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 0 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4012477/SRX4012477.10_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4012477/SRX4012477.10_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4012477/SRX4012477.10_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Tue, 16 Jun 2020 10:33:28: 75000000 INFO @ Tue, 16 Jun 2020 10:33:36: 76000000 INFO @ Tue, 16 Jun 2020 10:33:43: 77000000 INFO @ Tue, 16 Jun 2020 10:33:46: #1 tag size is determined as 75 bps INFO @ Tue, 16 Jun 2020 10:33:46: #1 tag size = 75 INFO @ Tue, 16 Jun 2020 10:33:46: #1 total tags in treatment: 37417146 INFO @ Tue, 16 Jun 2020 10:33:46: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 10:33:46: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 10:33:47: #1 tags after filtering in treatment: 32316408 INFO @ Tue, 16 Jun 2020 10:33:47: #1 Redundant rate of treatment: 0.14 INFO @ Tue, 16 Jun 2020 10:33:47: #1 finished! INFO @ Tue, 16 Jun 2020 10:33:47: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 10:33:47: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 10:33:49: #2 number of paired peaks: 64 WARNING @ Tue, 16 Jun 2020 10:33:49: Too few paired peaks (64) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 16 Jun 2020 10:33:49: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce11/SRX4012477/SRX4012477.20_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4012477/SRX4012477.20_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4012477/SRX4012477.20_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4012477/SRX4012477.20_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling