Job ID = 6367200 SRX = SRX2978704 Genome = ce11 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2020-06-15T23:17:16 prefetch.2.10.7: 1) Downloading 'SRR5799211'... 2020-06-15T23:17:16 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:21:56 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:21:56 prefetch.2.10.7: 1) 'SRR5799211' was downloaded successfully 2020-06-15T23:21:56 prefetch.2.10.7: 'SRR5799211' has 0 unresolved dependencies Read 43812245 spots for SRR5799211/SRR5799211.sra Written 43812245 spots for SRR5799211/SRR5799211.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:45:25 43812245 reads; of these: 43812245 (100.00%) were paired; of these: 2628152 (6.00%) aligned concordantly 0 times 34652531 (79.09%) aligned concordantly exactly 1 time 6531562 (14.91%) aligned concordantly >1 times ---- 2628152 pairs aligned concordantly 0 times; of these: 560371 (21.32%) aligned discordantly 1 time ---- 2067781 pairs aligned 0 times concordantly or discordantly; of these: 4135562 mates make up the pairs; of these: 2688944 (65.02%) aligned 0 times 995284 (24.07%) aligned exactly 1 time 451334 (10.91%) aligned >1 times 96.93% overall alignment rate Time searching: 00:45:25 Overall time: 00:45:25 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 36 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 889119 / 41326527 = 0.0215 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 09:41:42: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX2978704/SRX2978704.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX2978704/SRX2978704.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX2978704/SRX2978704.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX2978704/SRX2978704.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 09:41:42: #1 read tag files... INFO @ Tue, 16 Jun 2020 09:41:42: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 09:41:48: 1000000 INFO @ Tue, 16 Jun 2020 09:41:55: 2000000 INFO @ Tue, 16 Jun 2020 09:42:01: 3000000 INFO @ Tue, 16 Jun 2020 09:42:06: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 09:42:12: 5000000 INFO @ Tue, 16 Jun 2020 09:42:12: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX2978704/SRX2978704.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX2978704/SRX2978704.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX2978704/SRX2978704.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX2978704/SRX2978704.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 09:42:12: #1 read tag files... INFO @ Tue, 16 Jun 2020 09:42:12: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 09:42:18: 6000000 INFO @ Tue, 16 Jun 2020 09:42:18: 1000000 INFO @ Tue, 16 Jun 2020 09:42:24: 7000000 INFO @ Tue, 16 Jun 2020 09:42:25: 2000000 INFO @ Tue, 16 Jun 2020 09:42:30: 8000000 INFO @ Tue, 16 Jun 2020 09:42:31: 3000000 INFO @ Tue, 16 Jun 2020 09:42:36: 9000000 INFO @ Tue, 16 Jun 2020 09:42:37: 4000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 09:42:42: 10000000 INFO @ Tue, 16 Jun 2020 09:42:42: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX2978704/SRX2978704.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX2978704/SRX2978704.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX2978704/SRX2978704.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX2978704/SRX2978704.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 09:42:42: #1 read tag files... INFO @ Tue, 16 Jun 2020 09:42:42: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 09:42:43: 5000000 INFO @ Tue, 16 Jun 2020 09:42:48: 11000000 INFO @ Tue, 16 Jun 2020 09:42:48: 1000000 INFO @ Tue, 16 Jun 2020 09:42:49: 6000000 INFO @ Tue, 16 Jun 2020 09:42:54: 12000000 INFO @ Tue, 16 Jun 2020 09:42:55: 2000000 INFO @ Tue, 16 Jun 2020 09:42:55: 7000000 INFO @ Tue, 16 Jun 2020 09:43:00: 13000000 INFO @ Tue, 16 Jun 2020 09:43:01: 3000000 INFO @ Tue, 16 Jun 2020 09:43:01: 8000000 INFO @ Tue, 16 Jun 2020 09:43:06: 14000000 INFO @ Tue, 16 Jun 2020 09:43:07: 4000000 INFO @ Tue, 16 Jun 2020 09:43:08: 9000000 INFO @ Tue, 16 Jun 2020 09:43:12: 15000000 INFO @ Tue, 16 Jun 2020 09:43:13: 5000000 INFO @ Tue, 16 Jun 2020 09:43:14: 10000000 INFO @ Tue, 16 Jun 2020 09:43:18: 16000000 INFO @ Tue, 16 Jun 2020 09:43:19: 6000000 INFO @ Tue, 16 Jun 2020 09:43:20: 11000000 INFO @ Tue, 16 Jun 2020 09:43:24: 17000000 INFO @ Tue, 16 Jun 2020 09:43:25: 7000000 INFO @ Tue, 16 Jun 2020 09:43:26: 12000000 INFO @ Tue, 16 Jun 2020 09:43:30: 18000000 INFO @ Tue, 16 Jun 2020 09:43:31: 8000000 INFO @ Tue, 16 Jun 2020 09:43:32: 13000000 INFO @ Tue, 16 Jun 2020 09:43:36: 19000000 INFO @ Tue, 16 Jun 2020 09:43:37: 9000000 INFO @ Tue, 16 Jun 2020 09:43:38: 14000000 INFO @ Tue, 16 Jun 2020 09:43:42: 20000000 INFO @ Tue, 16 Jun 2020 09:43:43: 10000000 INFO @ Tue, 16 Jun 2020 09:43:44: 15000000 INFO @ Tue, 16 Jun 2020 09:43:48: 21000000 INFO @ Tue, 16 Jun 2020 09:43:49: 11000000 INFO @ Tue, 16 Jun 2020 09:43:50: 16000000 INFO @ Tue, 16 Jun 2020 09:43:54: 22000000 INFO @ Tue, 16 Jun 2020 09:43:55: 12000000 INFO @ Tue, 16 Jun 2020 09:43:56: 17000000 INFO @ Tue, 16 Jun 2020 09:44:00: 23000000 INFO @ Tue, 16 Jun 2020 09:44:01: 13000000 INFO @ Tue, 16 Jun 2020 09:44:03: 18000000 INFO @ Tue, 16 Jun 2020 09:44:07: 24000000 INFO @ Tue, 16 Jun 2020 09:44:07: 14000000 INFO @ Tue, 16 Jun 2020 09:44:09: 19000000 INFO @ Tue, 16 Jun 2020 09:44:13: 25000000 INFO @ Tue, 16 Jun 2020 09:44:13: 15000000 INFO @ Tue, 16 Jun 2020 09:44:15: 20000000 INFO @ Tue, 16 Jun 2020 09:44:19: 16000000 INFO @ Tue, 16 Jun 2020 09:44:19: 26000000 INFO @ Tue, 16 Jun 2020 09:44:21: 21000000 INFO @ Tue, 16 Jun 2020 09:44:25: 17000000 INFO @ Tue, 16 Jun 2020 09:44:25: 27000000 INFO @ Tue, 16 Jun 2020 09:44:27: 22000000 INFO @ Tue, 16 Jun 2020 09:44:31: 18000000 INFO @ Tue, 16 Jun 2020 09:44:31: 28000000 INFO @ Tue, 16 Jun 2020 09:44:33: 23000000 INFO @ Tue, 16 Jun 2020 09:44:37: 19000000 INFO @ Tue, 16 Jun 2020 09:44:38: 29000000 INFO @ Tue, 16 Jun 2020 09:44:39: 24000000 INFO @ Tue, 16 Jun 2020 09:44:42: 20000000 INFO @ Tue, 16 Jun 2020 09:44:44: 30000000 INFO @ Tue, 16 Jun 2020 09:44:45: 25000000 INFO @ Tue, 16 Jun 2020 09:44:48: 21000000 INFO @ Tue, 16 Jun 2020 09:44:50: 31000000 INFO @ Tue, 16 Jun 2020 09:44:51: 26000000 INFO @ Tue, 16 Jun 2020 09:44:54: 22000000 INFO @ Tue, 16 Jun 2020 09:44:56: 32000000 INFO @ Tue, 16 Jun 2020 09:44:57: 27000000 INFO @ Tue, 16 Jun 2020 09:45:00: 23000000 INFO @ Tue, 16 Jun 2020 09:45:02: 33000000 INFO @ Tue, 16 Jun 2020 09:45:04: 28000000 INFO @ Tue, 16 Jun 2020 09:45:06: 24000000 INFO @ Tue, 16 Jun 2020 09:45:08: 34000000 INFO @ Tue, 16 Jun 2020 09:45:10: 29000000 INFO @ Tue, 16 Jun 2020 09:45:12: 25000000 INFO @ Tue, 16 Jun 2020 09:45:14: 35000000 INFO @ Tue, 16 Jun 2020 09:45:16: 30000000 INFO @ Tue, 16 Jun 2020 09:45:18: 26000000 INFO @ Tue, 16 Jun 2020 09:45:20: 36000000 INFO @ Tue, 16 Jun 2020 09:45:22: 31000000 INFO @ Tue, 16 Jun 2020 09:45:24: 27000000 INFO @ Tue, 16 Jun 2020 09:45:26: 37000000 INFO @ Tue, 16 Jun 2020 09:45:28: 32000000 INFO @ Tue, 16 Jun 2020 09:45:30: 28000000 INFO @ Tue, 16 Jun 2020 09:45:32: 38000000 INFO @ Tue, 16 Jun 2020 09:45:34: 33000000 INFO @ Tue, 16 Jun 2020 09:45:37: 29000000 INFO @ Tue, 16 Jun 2020 09:45:38: 39000000 INFO @ Tue, 16 Jun 2020 09:45:41: 34000000 INFO @ Tue, 16 Jun 2020 09:45:43: 30000000 INFO @ Tue, 16 Jun 2020 09:45:44: 40000000 INFO @ Tue, 16 Jun 2020 09:45:47: 35000000 INFO @ Tue, 16 Jun 2020 09:45:49: 31000000 INFO @ Tue, 16 Jun 2020 09:45:51: 41000000 INFO @ Tue, 16 Jun 2020 09:45:53: 36000000 INFO @ Tue, 16 Jun 2020 09:45:56: 32000000 INFO @ Tue, 16 Jun 2020 09:45:57: 42000000 INFO @ Tue, 16 Jun 2020 09:46:00: 37000000 INFO @ Tue, 16 Jun 2020 09:46:02: 33000000 INFO @ Tue, 16 Jun 2020 09:46:03: 43000000 INFO @ Tue, 16 Jun 2020 09:46:06: 38000000 INFO @ Tue, 16 Jun 2020 09:46:08: 34000000 INFO @ Tue, 16 Jun 2020 09:46:10: 44000000 INFO @ Tue, 16 Jun 2020 09:46:12: 39000000 INFO @ Tue, 16 Jun 2020 09:46:14: 35000000 INFO @ Tue, 16 Jun 2020 09:46:16: 45000000 INFO @ Tue, 16 Jun 2020 09:46:19: 40000000 INFO @ Tue, 16 Jun 2020 09:46:21: 36000000 INFO @ Tue, 16 Jun 2020 09:46:23: 46000000 INFO @ Tue, 16 Jun 2020 09:46:25: 41000000 INFO @ Tue, 16 Jun 2020 09:46:27: 37000000 INFO @ Tue, 16 Jun 2020 09:46:29: 47000000 INFO @ Tue, 16 Jun 2020 09:46:31: 42000000 INFO @ Tue, 16 Jun 2020 09:46:33: 38000000 INFO @ Tue, 16 Jun 2020 09:46:36: 48000000 INFO @ Tue, 16 Jun 2020 09:46:38: 43000000 INFO @ Tue, 16 Jun 2020 09:46:40: 39000000 INFO @ Tue, 16 Jun 2020 09:46:43: 49000000 INFO @ Tue, 16 Jun 2020 09:46:45: 44000000 INFO @ Tue, 16 Jun 2020 09:46:46: 40000000 INFO @ Tue, 16 Jun 2020 09:46:50: 50000000 INFO @ Tue, 16 Jun 2020 09:46:52: 45000000 INFO @ Tue, 16 Jun 2020 09:46:52: 41000000 INFO @ Tue, 16 Jun 2020 09:46:56: 51000000 INFO @ Tue, 16 Jun 2020 09:46:58: 46000000 INFO @ Tue, 16 Jun 2020 09:46:59: 42000000 INFO @ Tue, 16 Jun 2020 09:47:03: 52000000 INFO @ Tue, 16 Jun 2020 09:47:05: 47000000 INFO @ Tue, 16 Jun 2020 09:47:05: 43000000 INFO @ Tue, 16 Jun 2020 09:47:10: 53000000 INFO @ Tue, 16 Jun 2020 09:47:12: 48000000 INFO @ Tue, 16 Jun 2020 09:47:12: 44000000 INFO @ Tue, 16 Jun 2020 09:47:17: 54000000 INFO @ Tue, 16 Jun 2020 09:47:19: 49000000 INFO @ Tue, 16 Jun 2020 09:47:19: 45000000 INFO @ Tue, 16 Jun 2020 09:47:24: 55000000 INFO @ Tue, 16 Jun 2020 09:47:27: 46000000 INFO @ Tue, 16 Jun 2020 09:47:27: 50000000 INFO @ Tue, 16 Jun 2020 09:47:32: 56000000 INFO @ Tue, 16 Jun 2020 09:47:34: 47000000 INFO @ Tue, 16 Jun 2020 09:47:34: 51000000 INFO @ Tue, 16 Jun 2020 09:47:39: 57000000 INFO @ Tue, 16 Jun 2020 09:47:41: 48000000 INFO @ Tue, 16 Jun 2020 09:47:41: 52000000 INFO @ Tue, 16 Jun 2020 09:47:45: 58000000 INFO @ Tue, 16 Jun 2020 09:47:48: 49000000 INFO @ Tue, 16 Jun 2020 09:47:48: 53000000 INFO @ Tue, 16 Jun 2020 09:47:52: 59000000 INFO @ Tue, 16 Jun 2020 09:47:55: 50000000 INFO @ Tue, 16 Jun 2020 09:47:55: 54000000 INFO @ Tue, 16 Jun 2020 09:47:59: 60000000 INFO @ Tue, 16 Jun 2020 09:48:02: 51000000 INFO @ Tue, 16 Jun 2020 09:48:02: 55000000 INFO @ Tue, 16 Jun 2020 09:48:06: 61000000 INFO @ Tue, 16 Jun 2020 09:48:09: 52000000 INFO @ Tue, 16 Jun 2020 09:48:09: 56000000 INFO @ Tue, 16 Jun 2020 09:48:13: 62000000 INFO @ Tue, 16 Jun 2020 09:48:16: 53000000 INFO @ Tue, 16 Jun 2020 09:48:16: 57000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 16 Jun 2020 09:48:19: 63000000 INFO @ Tue, 16 Jun 2020 09:48:22: 54000000 INFO @ Tue, 16 Jun 2020 09:48:23: 58000000 INFO @ Tue, 16 Jun 2020 09:48:26: 64000000 INFO @ Tue, 16 Jun 2020 09:48:29: 55000000 INFO @ Tue, 16 Jun 2020 09:48:29: 59000000 INFO @ Tue, 16 Jun 2020 09:48:32: 65000000 INFO @ Tue, 16 Jun 2020 09:48:35: 56000000 INFO @ Tue, 16 Jun 2020 09:48:36: 60000000 INFO @ Tue, 16 Jun 2020 09:48:39: 66000000 INFO @ Tue, 16 Jun 2020 09:48:42: 57000000 INFO @ Tue, 16 Jun 2020 09:48:42: 61000000 INFO @ Tue, 16 Jun 2020 09:48:45: 67000000 INFO @ Tue, 16 Jun 2020 09:48:48: 58000000 INFO @ Tue, 16 Jun 2020 09:48:49: 62000000 INFO @ Tue, 16 Jun 2020 09:48:52: 68000000 INFO @ Tue, 16 Jun 2020 09:48:55: 59000000 INFO @ Tue, 16 Jun 2020 09:48:55: 63000000 INFO @ Tue, 16 Jun 2020 09:48:58: 69000000 INFO @ Tue, 16 Jun 2020 09:49:01: 60000000 INFO @ Tue, 16 Jun 2020 09:49:02: 64000000 INFO @ Tue, 16 Jun 2020 09:49:05: 70000000 INFO @ Tue, 16 Jun 2020 09:49:07: 61000000 INFO @ Tue, 16 Jun 2020 09:49:08: 65000000 INFO @ Tue, 16 Jun 2020 09:49:11: 71000000 INFO @ Tue, 16 Jun 2020 09:49:14: 62000000 INFO @ Tue, 16 Jun 2020 09:49:15: 66000000 INFO @ Tue, 16 Jun 2020 09:49:18: 72000000 INFO @ Tue, 16 Jun 2020 09:49:20: 63000000 INFO @ Tue, 16 Jun 2020 09:49:21: 67000000 INFO @ Tue, 16 Jun 2020 09:49:24: 73000000 INFO @ Tue, 16 Jun 2020 09:49:26: 64000000 INFO @ Tue, 16 Jun 2020 09:49:28: 68000000 INFO @ Tue, 16 Jun 2020 09:49:31: 74000000 INFO @ Tue, 16 Jun 2020 09:49:33: 65000000 INFO @ Tue, 16 Jun 2020 09:49:35: 69000000 INFO @ Tue, 16 Jun 2020 09:49:37: 75000000 INFO @ Tue, 16 Jun 2020 09:49:40: 66000000 INFO @ Tue, 16 Jun 2020 09:49:42: 70000000 INFO @ Tue, 16 Jun 2020 09:49:44: 76000000 INFO @ Tue, 16 Jun 2020 09:49:46: 67000000 INFO @ Tue, 16 Jun 2020 09:49:49: 71000000 INFO @ Tue, 16 Jun 2020 09:49:51: 77000000 INFO @ Tue, 16 Jun 2020 09:49:53: 68000000 INFO @ Tue, 16 Jun 2020 09:49:55: 72000000 INFO @ Tue, 16 Jun 2020 09:49:57: 78000000 INFO @ Tue, 16 Jun 2020 09:50:00: 69000000 INFO @ Tue, 16 Jun 2020 09:50:02: 73000000 INFO @ Tue, 16 Jun 2020 09:50:04: 79000000 INFO @ Tue, 16 Jun 2020 09:50:06: 70000000 BigWig に変換しました。 INFO @ Tue, 16 Jun 2020 09:50:09: 74000000 INFO @ Tue, 16 Jun 2020 09:50:11: 80000000 INFO @ Tue, 16 Jun 2020 09:50:13: 71000000 INFO @ Tue, 16 Jun 2020 09:50:16: 75000000 INFO @ Tue, 16 Jun 2020 09:50:17: 81000000 INFO @ Tue, 16 Jun 2020 09:50:20: 72000000 INFO @ Tue, 16 Jun 2020 09:50:22: 76000000 INFO @ Tue, 16 Jun 2020 09:50:24: 82000000 INFO @ Tue, 16 Jun 2020 09:50:27: 73000000 INFO @ Tue, 16 Jun 2020 09:50:29: 77000000 INFO @ Tue, 16 Jun 2020 09:50:31: 83000000 INFO @ Tue, 16 Jun 2020 09:50:32: #1 tag size is determined as 50 bps INFO @ Tue, 16 Jun 2020 09:50:32: #1 tag size = 50 INFO @ Tue, 16 Jun 2020 09:50:32: #1 total tags in treatment: 40296052 INFO @ Tue, 16 Jun 2020 09:50:32: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 09:50:32: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 09:50:33: #1 tags after filtering in treatment: 33768271 INFO @ Tue, 16 Jun 2020 09:50:33: #1 Redundant rate of treatment: 0.16 INFO @ Tue, 16 Jun 2020 09:50:33: #1 finished! INFO @ Tue, 16 Jun 2020 09:50:33: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 09:50:33: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 09:50:33: 74000000 INFO @ Tue, 16 Jun 2020 09:50:35: #2 number of paired peaks: 53 WARNING @ Tue, 16 Jun 2020 09:50:35: Too few paired peaks (53) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 16 Jun 2020 09:50:35: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce11/SRX2978704/SRX2978704.05_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX2978704/SRX2978704.05_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX2978704/SRX2978704.05_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX2978704/SRX2978704.05_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Tue, 16 Jun 2020 09:50:36: 78000000 INFO @ Tue, 16 Jun 2020 09:50:40: 75000000 INFO @ Tue, 16 Jun 2020 09:50:43: 79000000 INFO @ Tue, 16 Jun 2020 09:50:47: 76000000 INFO @ Tue, 16 Jun 2020 09:50:49: 80000000 INFO @ Tue, 16 Jun 2020 09:50:53: 77000000 INFO @ Tue, 16 Jun 2020 09:50:56: 81000000 INFO @ Tue, 16 Jun 2020 09:51:00: 78000000 INFO @ Tue, 16 Jun 2020 09:51:02: 82000000 INFO @ Tue, 16 Jun 2020 09:51:06: 79000000 INFO @ Tue, 16 Jun 2020 09:51:09: 83000000 INFO @ Tue, 16 Jun 2020 09:51:10: #1 tag size is determined as 50 bps INFO @ Tue, 16 Jun 2020 09:51:10: #1 tag size = 50 INFO @ Tue, 16 Jun 2020 09:51:10: #1 total tags in treatment: 40296052 INFO @ Tue, 16 Jun 2020 09:51:10: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 09:51:10: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 09:51:11: #1 tags after filtering in treatment: 33768271 INFO @ Tue, 16 Jun 2020 09:51:11: #1 Redundant rate of treatment: 0.16 INFO @ Tue, 16 Jun 2020 09:51:11: #1 finished! INFO @ Tue, 16 Jun 2020 09:51:11: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 09:51:11: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 09:51:12: 80000000 INFO @ Tue, 16 Jun 2020 09:51:13: #2 number of paired peaks: 53 WARNING @ Tue, 16 Jun 2020 09:51:13: Too few paired peaks (53) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 16 Jun 2020 09:51:13: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce11/SRX2978704/SRX2978704.10_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX2978704/SRX2978704.10_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX2978704/SRX2978704.10_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX2978704/SRX2978704.10_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Tue, 16 Jun 2020 09:51:18: 81000000 INFO @ Tue, 16 Jun 2020 09:51:24: 82000000 INFO @ Tue, 16 Jun 2020 09:51:30: 83000000 INFO @ Tue, 16 Jun 2020 09:51:32: #1 tag size is determined as 50 bps INFO @ Tue, 16 Jun 2020 09:51:32: #1 tag size = 50 INFO @ Tue, 16 Jun 2020 09:51:32: #1 total tags in treatment: 40296052 INFO @ Tue, 16 Jun 2020 09:51:32: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 09:51:32: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 09:51:32: #1 tags after filtering in treatment: 33768271 INFO @ Tue, 16 Jun 2020 09:51:32: #1 Redundant rate of treatment: 0.16 INFO @ Tue, 16 Jun 2020 09:51:32: #1 finished! INFO @ Tue, 16 Jun 2020 09:51:32: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 09:51:32: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 09:51:35: #2 number of paired peaks: 53 WARNING @ Tue, 16 Jun 2020 09:51:35: Too few paired peaks (53) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 16 Jun 2020 09:51:35: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce11/SRX2978704/SRX2978704.20_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX2978704/SRX2978704.20_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX2978704/SRX2978704.20_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX2978704/SRX2978704.20_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling