Job ID = 6367157 SRX = SRX2958248 Genome = ce11 sra ファイルのダウンロード中... Read layout: SINGLE fastq に変換中... 2020-06-15T23:10:16 prefetch.2.10.7: 1) Downloading 'SRR5758247'... 2020-06-15T23:10:16 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:12:30 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:12:30 prefetch.2.10.7: 1) 'SRR5758247' was downloaded successfully 2020-06-15T23:12:30 prefetch.2.10.7: 'SRR5758247' has 0 unresolved dependencies Read 38883147 spots for SRR5758247/SRR5758247.sra Written 38883147 spots for SRR5758247/SRR5758247.sra 2020-06-15T23:14:37 prefetch.2.10.7: 1) Downloading 'SRR5758249'... 2020-06-15T23:14:37 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:16:05 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:16:05 prefetch.2.10.7: 1) 'SRR5758249' was downloaded successfully 2020-06-15T23:16:05 prefetch.2.10.7: 'SRR5758249' has 0 unresolved dependencies Read 29938460 spots for SRR5758249/SRR5758249.sra Written 29938460 spots for SRR5758249/SRR5758249.sra 2020-06-15T23:17:46 prefetch.2.10.7: 1) Downloading 'SRR5758250'... 2020-06-15T23:17:46 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:19:05 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:19:06 prefetch.2.10.7: 'SRR5758250' is valid 2020-06-15T23:19:06 prefetch.2.10.7: 1) 'SRR5758250' was downloaded successfully 2020-06-15T23:19:06 prefetch.2.10.7: 'SRR5758250' has 0 unresolved dependencies Read 28254978 spots for SRR5758250/SRR5758250.sra Written 28254978 spots for SRR5758250/SRR5758250.sra 2020-06-15T23:20:41 prefetch.2.10.7: 1) Downloading 'SRR5758251'... 2020-06-15T23:20:41 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:22:41 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:22:41 prefetch.2.10.7: 1) 'SRR5758251' was downloaded successfully 2020-06-15T23:22:41 prefetch.2.10.7: 'SRR5758251' has 0 unresolved dependencies Read 38615371 spots for SRR5758251/SRR5758251.sra Written 38615371 spots for SRR5758251/SRR5758251.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:28:42 135691956 reads; of these: 135691956 (100.00%) were unpaired; of these: 13649743 (10.06%) aligned 0 times 100204840 (73.85%) aligned exactly 1 time 21837373 (16.09%) aligned >1 times 89.94% overall alignment rate Time searching: 00:28:42 Overall time: 00:28:42 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 52 files... [bam_rmdupse_core] 47997986 / 122042213 = 0.3933 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 09:12:40: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX2958248/SRX2958248.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX2958248/SRX2958248.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX2958248/SRX2958248.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX2958248/SRX2958248.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 09:12:40: #1 read tag files... INFO @ Tue, 16 Jun 2020 09:12:40: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 09:12:47: 1000000 INFO @ Tue, 16 Jun 2020 09:12:54: 2000000 INFO @ Tue, 16 Jun 2020 09:13:01: 3000000 INFO @ Tue, 16 Jun 2020 09:13:08: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 09:13:10: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX2958248/SRX2958248.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX2958248/SRX2958248.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX2958248/SRX2958248.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX2958248/SRX2958248.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 09:13:10: #1 read tag files... INFO @ Tue, 16 Jun 2020 09:13:10: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 09:13:16: 5000000 INFO @ Tue, 16 Jun 2020 09:13:18: 1000000 INFO @ Tue, 16 Jun 2020 09:13:23: 6000000 INFO @ Tue, 16 Jun 2020 09:13:25: 2000000 INFO @ Tue, 16 Jun 2020 09:13:31: 7000000 INFO @ Tue, 16 Jun 2020 09:13:32: 3000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 09:13:39: 8000000 INFO @ Tue, 16 Jun 2020 09:13:39: 4000000 INFO @ Tue, 16 Jun 2020 09:13:40: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX2958248/SRX2958248.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX2958248/SRX2958248.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX2958248/SRX2958248.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX2958248/SRX2958248.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 09:13:40: #1 read tag files... INFO @ Tue, 16 Jun 2020 09:13:40: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 09:13:47: 5000000 INFO @ Tue, 16 Jun 2020 09:13:47: 9000000 INFO @ Tue, 16 Jun 2020 09:13:48: 1000000 INFO @ Tue, 16 Jun 2020 09:13:54: 6000000 INFO @ Tue, 16 Jun 2020 09:13:55: 10000000 INFO @ Tue, 16 Jun 2020 09:13:55: 2000000 INFO @ Tue, 16 Jun 2020 09:14:02: 7000000 INFO @ Tue, 16 Jun 2020 09:14:02: 11000000 INFO @ Tue, 16 Jun 2020 09:14:02: 3000000 INFO @ Tue, 16 Jun 2020 09:14:09: 8000000 INFO @ Tue, 16 Jun 2020 09:14:10: 4000000 INFO @ Tue, 16 Jun 2020 09:14:10: 12000000 INFO @ Tue, 16 Jun 2020 09:14:17: 9000000 INFO @ Tue, 16 Jun 2020 09:14:17: 5000000 INFO @ Tue, 16 Jun 2020 09:14:18: 13000000 INFO @ Tue, 16 Jun 2020 09:14:24: 10000000 INFO @ Tue, 16 Jun 2020 09:14:25: 6000000 INFO @ Tue, 16 Jun 2020 09:14:25: 14000000 INFO @ Tue, 16 Jun 2020 09:14:31: 11000000 INFO @ Tue, 16 Jun 2020 09:14:32: 7000000 INFO @ Tue, 16 Jun 2020 09:14:33: 15000000 INFO @ Tue, 16 Jun 2020 09:14:39: 12000000 INFO @ Tue, 16 Jun 2020 09:14:40: 8000000 INFO @ Tue, 16 Jun 2020 09:14:41: 16000000 INFO @ Tue, 16 Jun 2020 09:14:47: 13000000 INFO @ Tue, 16 Jun 2020 09:14:47: 9000000 INFO @ Tue, 16 Jun 2020 09:14:49: 17000000 INFO @ Tue, 16 Jun 2020 09:14:54: 14000000 INFO @ Tue, 16 Jun 2020 09:14:55: 10000000 INFO @ Tue, 16 Jun 2020 09:14:57: 18000000 INFO @ Tue, 16 Jun 2020 09:15:01: 15000000 INFO @ Tue, 16 Jun 2020 09:15:02: 11000000 INFO @ Tue, 16 Jun 2020 09:15:05: 19000000 INFO @ Tue, 16 Jun 2020 09:15:09: 16000000 INFO @ Tue, 16 Jun 2020 09:15:09: 12000000 INFO @ Tue, 16 Jun 2020 09:15:13: 20000000 INFO @ Tue, 16 Jun 2020 09:15:16: 17000000 INFO @ Tue, 16 Jun 2020 09:15:17: 13000000 INFO @ Tue, 16 Jun 2020 09:15:21: 21000000 INFO @ Tue, 16 Jun 2020 09:15:24: 18000000 INFO @ Tue, 16 Jun 2020 09:15:24: 14000000 INFO @ Tue, 16 Jun 2020 09:15:29: 22000000 INFO @ Tue, 16 Jun 2020 09:15:31: 19000000 INFO @ Tue, 16 Jun 2020 09:15:31: 15000000 INFO @ Tue, 16 Jun 2020 09:15:37: 23000000 INFO @ Tue, 16 Jun 2020 09:15:38: 20000000 INFO @ Tue, 16 Jun 2020 09:15:39: 16000000 INFO @ Tue, 16 Jun 2020 09:15:45: 24000000 INFO @ Tue, 16 Jun 2020 09:15:46: 21000000 INFO @ Tue, 16 Jun 2020 09:15:46: 17000000 INFO @ Tue, 16 Jun 2020 09:15:52: 25000000 INFO @ Tue, 16 Jun 2020 09:15:53: 22000000 INFO @ Tue, 16 Jun 2020 09:15:54: 18000000 INFO @ Tue, 16 Jun 2020 09:16:00: 26000000 INFO @ Tue, 16 Jun 2020 09:16:01: 23000000 INFO @ Tue, 16 Jun 2020 09:16:01: 19000000 INFO @ Tue, 16 Jun 2020 09:16:08: 27000000 INFO @ Tue, 16 Jun 2020 09:16:09: 20000000 INFO @ Tue, 16 Jun 2020 09:16:09: 24000000 INFO @ Tue, 16 Jun 2020 09:16:16: 21000000 INFO @ Tue, 16 Jun 2020 09:16:16: 25000000 INFO @ Tue, 16 Jun 2020 09:16:16: 28000000 INFO @ Tue, 16 Jun 2020 09:16:23: 26000000 INFO @ Tue, 16 Jun 2020 09:16:23: 22000000 INFO @ Tue, 16 Jun 2020 09:16:23: 29000000 INFO @ Tue, 16 Jun 2020 09:16:31: 27000000 INFO @ Tue, 16 Jun 2020 09:16:31: 23000000 INFO @ Tue, 16 Jun 2020 09:16:31: 30000000 INFO @ Tue, 16 Jun 2020 09:16:38: 28000000 INFO @ Tue, 16 Jun 2020 09:16:38: 24000000 INFO @ Tue, 16 Jun 2020 09:16:39: 31000000 INFO @ Tue, 16 Jun 2020 09:16:46: 29000000 INFO @ Tue, 16 Jun 2020 09:16:46: 25000000 INFO @ Tue, 16 Jun 2020 09:16:47: 32000000 INFO @ Tue, 16 Jun 2020 09:16:53: 30000000 INFO @ Tue, 16 Jun 2020 09:16:53: 26000000 INFO @ Tue, 16 Jun 2020 09:16:55: 33000000 INFO @ Tue, 16 Jun 2020 09:17:00: 31000000 INFO @ Tue, 16 Jun 2020 09:17:01: 27000000 INFO @ Tue, 16 Jun 2020 09:17:03: 34000000 INFO @ Tue, 16 Jun 2020 09:17:08: 32000000 INFO @ Tue, 16 Jun 2020 09:17:08: 28000000 INFO @ Tue, 16 Jun 2020 09:17:11: 35000000 INFO @ Tue, 16 Jun 2020 09:17:16: 33000000 INFO @ Tue, 16 Jun 2020 09:17:16: 29000000 INFO @ Tue, 16 Jun 2020 09:17:19: 36000000 INFO @ Tue, 16 Jun 2020 09:17:23: 34000000 INFO @ Tue, 16 Jun 2020 09:17:23: 30000000 INFO @ Tue, 16 Jun 2020 09:17:27: 37000000 INFO @ Tue, 16 Jun 2020 09:17:31: 35000000 INFO @ Tue, 16 Jun 2020 09:17:31: 31000000 INFO @ Tue, 16 Jun 2020 09:17:35: 38000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 16 Jun 2020 09:17:38: 36000000 INFO @ Tue, 16 Jun 2020 09:17:38: 32000000 INFO @ Tue, 16 Jun 2020 09:17:43: 39000000 INFO @ Tue, 16 Jun 2020 09:17:46: 37000000 INFO @ Tue, 16 Jun 2020 09:17:46: 33000000 INFO @ Tue, 16 Jun 2020 09:17:51: 40000000 INFO @ Tue, 16 Jun 2020 09:17:53: 38000000 INFO @ Tue, 16 Jun 2020 09:17:53: 34000000 INFO @ Tue, 16 Jun 2020 09:17:59: 41000000 INFO @ Tue, 16 Jun 2020 09:18:01: 39000000 INFO @ Tue, 16 Jun 2020 09:18:01: 35000000 INFO @ Tue, 16 Jun 2020 09:18:07: 42000000 INFO @ Tue, 16 Jun 2020 09:18:08: 40000000 INFO @ Tue, 16 Jun 2020 09:18:08: 36000000 INFO @ Tue, 16 Jun 2020 09:18:15: 43000000 INFO @ Tue, 16 Jun 2020 09:18:16: 41000000 INFO @ Tue, 16 Jun 2020 09:18:16: 37000000 INFO @ Tue, 16 Jun 2020 09:18:23: 44000000 INFO @ Tue, 16 Jun 2020 09:18:23: 42000000 INFO @ Tue, 16 Jun 2020 09:18:24: 38000000 INFO @ Tue, 16 Jun 2020 09:18:31: 43000000 INFO @ Tue, 16 Jun 2020 09:18:31: 39000000 INFO @ Tue, 16 Jun 2020 09:18:31: 45000000 INFO @ Tue, 16 Jun 2020 09:18:38: 44000000 INFO @ Tue, 16 Jun 2020 09:18:39: 40000000 INFO @ Tue, 16 Jun 2020 09:18:39: 46000000 INFO @ Tue, 16 Jun 2020 09:18:46: 45000000 INFO @ Tue, 16 Jun 2020 09:18:46: 41000000 INFO @ Tue, 16 Jun 2020 09:18:47: 47000000 INFO @ Tue, 16 Jun 2020 09:18:54: 46000000 INFO @ Tue, 16 Jun 2020 09:18:54: 42000000 INFO @ Tue, 16 Jun 2020 09:18:55: 48000000 INFO @ Tue, 16 Jun 2020 09:19:01: 47000000 INFO @ Tue, 16 Jun 2020 09:19:01: 43000000 BigWig に変換しました。 INFO @ Tue, 16 Jun 2020 09:19:03: 49000000 INFO @ Tue, 16 Jun 2020 09:19:09: 44000000 INFO @ Tue, 16 Jun 2020 09:19:09: 48000000 INFO @ Tue, 16 Jun 2020 09:19:11: 50000000 INFO @ Tue, 16 Jun 2020 09:19:17: 45000000 INFO @ Tue, 16 Jun 2020 09:19:17: 49000000 INFO @ Tue, 16 Jun 2020 09:19:19: 51000000 INFO @ Tue, 16 Jun 2020 09:19:24: 50000000 INFO @ Tue, 16 Jun 2020 09:19:24: 46000000 INFO @ Tue, 16 Jun 2020 09:19:27: 52000000 INFO @ Tue, 16 Jun 2020 09:19:32: 51000000 INFO @ Tue, 16 Jun 2020 09:19:32: 47000000 INFO @ Tue, 16 Jun 2020 09:19:35: 53000000 INFO @ Tue, 16 Jun 2020 09:19:40: 52000000 INFO @ Tue, 16 Jun 2020 09:19:40: 48000000 INFO @ Tue, 16 Jun 2020 09:19:43: 54000000 INFO @ Tue, 16 Jun 2020 09:19:47: 49000000 INFO @ Tue, 16 Jun 2020 09:19:48: 53000000 INFO @ Tue, 16 Jun 2020 09:19:51: 55000000 INFO @ Tue, 16 Jun 2020 09:19:55: 50000000 INFO @ Tue, 16 Jun 2020 09:19:55: 54000000 INFO @ Tue, 16 Jun 2020 09:19:59: 56000000 INFO @ Tue, 16 Jun 2020 09:20:03: 51000000 INFO @ Tue, 16 Jun 2020 09:20:03: 55000000 INFO @ Tue, 16 Jun 2020 09:20:08: 57000000 INFO @ Tue, 16 Jun 2020 09:20:11: 52000000 INFO @ Tue, 16 Jun 2020 09:20:11: 56000000 INFO @ Tue, 16 Jun 2020 09:20:16: 58000000 INFO @ Tue, 16 Jun 2020 09:20:19: 57000000 INFO @ Tue, 16 Jun 2020 09:20:19: 53000000 INFO @ Tue, 16 Jun 2020 09:20:24: 59000000 INFO @ Tue, 16 Jun 2020 09:20:26: 54000000 INFO @ Tue, 16 Jun 2020 09:20:26: 58000000 INFO @ Tue, 16 Jun 2020 09:20:31: 60000000 INFO @ Tue, 16 Jun 2020 09:20:34: 55000000 INFO @ Tue, 16 Jun 2020 09:20:34: 59000000 INFO @ Tue, 16 Jun 2020 09:20:39: 61000000 INFO @ Tue, 16 Jun 2020 09:20:41: 56000000 INFO @ Tue, 16 Jun 2020 09:20:41: 60000000 INFO @ Tue, 16 Jun 2020 09:20:47: 62000000 INFO @ Tue, 16 Jun 2020 09:20:49: 57000000 INFO @ Tue, 16 Jun 2020 09:20:49: 61000000 INFO @ Tue, 16 Jun 2020 09:20:55: 63000000 INFO @ Tue, 16 Jun 2020 09:20:56: 58000000 INFO @ Tue, 16 Jun 2020 09:20:57: 62000000 INFO @ Tue, 16 Jun 2020 09:21:03: 64000000 INFO @ Tue, 16 Jun 2020 09:21:04: 59000000 INFO @ Tue, 16 Jun 2020 09:21:04: 63000000 INFO @ Tue, 16 Jun 2020 09:21:11: 65000000 INFO @ Tue, 16 Jun 2020 09:21:12: 60000000 INFO @ Tue, 16 Jun 2020 09:21:12: 64000000 INFO @ Tue, 16 Jun 2020 09:21:19: 66000000 INFO @ Tue, 16 Jun 2020 09:21:19: 61000000 INFO @ Tue, 16 Jun 2020 09:21:19: 65000000 INFO @ Tue, 16 Jun 2020 09:21:27: 62000000 INFO @ Tue, 16 Jun 2020 09:21:27: 66000000 INFO @ Tue, 16 Jun 2020 09:21:27: 67000000 INFO @ Tue, 16 Jun 2020 09:21:34: 63000000 INFO @ Tue, 16 Jun 2020 09:21:34: 67000000 INFO @ Tue, 16 Jun 2020 09:21:35: 68000000 INFO @ Tue, 16 Jun 2020 09:21:42: 64000000 INFO @ Tue, 16 Jun 2020 09:21:42: 68000000 INFO @ Tue, 16 Jun 2020 09:21:43: 69000000 INFO @ Tue, 16 Jun 2020 09:21:49: 65000000 INFO @ Tue, 16 Jun 2020 09:21:50: 69000000 INFO @ Tue, 16 Jun 2020 09:21:51: 70000000 INFO @ Tue, 16 Jun 2020 09:21:57: 66000000 INFO @ Tue, 16 Jun 2020 09:21:57: 70000000 INFO @ Tue, 16 Jun 2020 09:21:58: 71000000 INFO @ Tue, 16 Jun 2020 09:22:05: 67000000 INFO @ Tue, 16 Jun 2020 09:22:05: 71000000 INFO @ Tue, 16 Jun 2020 09:22:06: 72000000 INFO @ Tue, 16 Jun 2020 09:22:12: 68000000 INFO @ Tue, 16 Jun 2020 09:22:12: 72000000 INFO @ Tue, 16 Jun 2020 09:22:14: 73000000 INFO @ Tue, 16 Jun 2020 09:22:20: 69000000 INFO @ Tue, 16 Jun 2020 09:22:20: 73000000 INFO @ Tue, 16 Jun 2020 09:22:21: 74000000 INFO @ Tue, 16 Jun 2020 09:22:22: #1 tag size is determined as 51 bps INFO @ Tue, 16 Jun 2020 09:22:22: #1 tag size = 51 INFO @ Tue, 16 Jun 2020 09:22:22: #1 total tags in treatment: 74044227 INFO @ Tue, 16 Jun 2020 09:22:22: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 09:22:22: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 09:22:23: #1 tags after filtering in treatment: 74044227 INFO @ Tue, 16 Jun 2020 09:22:23: #1 Redundant rate of treatment: 0.00 INFO @ Tue, 16 Jun 2020 09:22:23: #1 finished! INFO @ Tue, 16 Jun 2020 09:22:23: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 09:22:23: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 09:22:27: 70000000 INFO @ Tue, 16 Jun 2020 09:22:27: 74000000 INFO @ Tue, 16 Jun 2020 09:22:28: #2 number of paired peaks: 0 WARNING @ Tue, 16 Jun 2020 09:22:28: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 16 Jun 2020 09:22:28: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce11/SRX2958248/SRX2958248.05_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX2958248/SRX2958248.05_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX2958248/SRX2958248.05_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX2958248/SRX2958248.05_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Tue, 16 Jun 2020 09:22:28: #1 tag size is determined as 51 bps INFO @ Tue, 16 Jun 2020 09:22:28: #1 tag size = 51 INFO @ Tue, 16 Jun 2020 09:22:28: #1 total tags in treatment: 74044227 INFO @ Tue, 16 Jun 2020 09:22:28: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 09:22:28: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 09:22:29: #1 tags after filtering in treatment: 74044227 INFO @ Tue, 16 Jun 2020 09:22:29: #1 Redundant rate of treatment: 0.00 INFO @ Tue, 16 Jun 2020 09:22:29: #1 finished! INFO @ Tue, 16 Jun 2020 09:22:29: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 09:22:29: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 09:22:33: 71000000 INFO @ Tue, 16 Jun 2020 09:22:33: #2 number of paired peaks: 0 WARNING @ Tue, 16 Jun 2020 09:22:33: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 16 Jun 2020 09:22:33: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce11/SRX2958248/SRX2958248.10_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX2958248/SRX2958248.10_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX2958248/SRX2958248.10_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX2958248/SRX2958248.10_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Tue, 16 Jun 2020 09:22:40: 72000000 INFO @ Tue, 16 Jun 2020 09:22:46: 73000000 INFO @ Tue, 16 Jun 2020 09:22:53: 74000000 INFO @ Tue, 16 Jun 2020 09:22:54: #1 tag size is determined as 51 bps INFO @ Tue, 16 Jun 2020 09:22:54: #1 tag size = 51 INFO @ Tue, 16 Jun 2020 09:22:54: #1 total tags in treatment: 74044227 INFO @ Tue, 16 Jun 2020 09:22:54: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 09:22:54: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 09:22:55: #1 tags after filtering in treatment: 74044227 INFO @ Tue, 16 Jun 2020 09:22:55: #1 Redundant rate of treatment: 0.00 INFO @ Tue, 16 Jun 2020 09:22:55: #1 finished! INFO @ Tue, 16 Jun 2020 09:22:55: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 09:22:55: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 09:22:59: #2 number of paired peaks: 0 WARNING @ Tue, 16 Jun 2020 09:22:59: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 16 Jun 2020 09:22:59: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce11/SRX2958248/SRX2958248.20_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX2958248/SRX2958248.20_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX2958248/SRX2958248.20_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX2958248/SRX2958248.20_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling