Job ID = 6366881 SRX = SRX246038 Genome = ce11 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2020-06-15T22:59:38 prefetch.2.10.7: 1) Downloading 'SRR766599'... 2020-06-15T22:59:38 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:00:07 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:00:07 prefetch.2.10.7: 'SRR766599' is valid 2020-06-15T23:00:07 prefetch.2.10.7: 1) 'SRR766599' was downloaded successfully Read 4000000 spots for SRR766599/SRR766599.sra Written 4000000 spots for SRR766599/SRR766599.sra 2020-06-15T23:00:37 prefetch.2.10.7: 1) Downloading 'SRR766600'... 2020-06-15T23:00:37 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:01:01 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:01:01 prefetch.2.10.7: 'SRR766600' is valid 2020-06-15T23:01:01 prefetch.2.10.7: 1) 'SRR766600' was downloaded successfully Read 4000000 spots for SRR766600/SRR766600.sra Written 4000000 spots for SRR766600/SRR766600.sra 2020-06-15T23:01:31 prefetch.2.10.7: 1) Downloading 'SRR766601'... 2020-06-15T23:01:31 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:01:58 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:01:59 prefetch.2.10.7: 'SRR766601' is valid 2020-06-15T23:01:59 prefetch.2.10.7: 1) 'SRR766601' was downloaded successfully Read 4000000 spots for SRR766601/SRR766601.sra Written 4000000 spots for SRR766601/SRR766601.sra 2020-06-15T23:02:29 prefetch.2.10.7: 1) Downloading 'SRR766602'... 2020-06-15T23:02:29 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:03:01 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:03:01 prefetch.2.10.7: 'SRR766602' is valid 2020-06-15T23:03:01 prefetch.2.10.7: 1) 'SRR766602' was downloaded successfully Read 4000000 spots for SRR766602/SRR766602.sra Written 4000000 spots for SRR766602/SRR766602.sra 2020-06-15T23:03:31 prefetch.2.10.7: 1) Downloading 'SRR766603'... 2020-06-15T23:03:31 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:04:01 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:04:01 prefetch.2.10.7: 'SRR766603' is valid 2020-06-15T23:04:01 prefetch.2.10.7: 1) 'SRR766603' was downloaded successfully Read 4000000 spots for SRR766603/SRR766603.sra Written 4000000 spots for SRR766603/SRR766603.sra 2020-06-15T23:04:31 prefetch.2.10.7: 1) Downloading 'SRR766604'... 2020-06-15T23:04:31 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:04:57 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:04:57 prefetch.2.10.7: 'SRR766604' is valid 2020-06-15T23:04:57 prefetch.2.10.7: 1) 'SRR766604' was downloaded successfully Read 4000000 spots for SRR766604/SRR766604.sra Written 4000000 spots for SRR766604/SRR766604.sra 2020-06-15T23:05:26 prefetch.2.10.7: 1) Downloading 'SRR766605'... 2020-06-15T23:05:26 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:05:51 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:05:52 prefetch.2.10.7: 'SRR766605' is valid 2020-06-15T23:05:52 prefetch.2.10.7: 1) 'SRR766605' was downloaded successfully Read 4000000 spots for SRR766605/SRR766605.sra Written 4000000 spots for SRR766605/SRR766605.sra 2020-06-15T23:06:20 prefetch.2.10.7: 1) Downloading 'SRR766606'... 2020-06-15T23:06:20 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:06:45 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:06:45 prefetch.2.10.7: 'SRR766606' is valid 2020-06-15T23:06:45 prefetch.2.10.7: 1) 'SRR766606' was downloaded successfully Read 4000000 spots for SRR766606/SRR766606.sra Written 4000000 spots for SRR766606/SRR766606.sra 2020-06-15T23:07:15 prefetch.2.10.7: 1) Downloading 'SRR766607'... 2020-06-15T23:07:15 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:07:57 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:07:58 prefetch.2.10.7: 'SRR766607' is valid 2020-06-15T23:07:58 prefetch.2.10.7: 1) 'SRR766607' was downloaded successfully Read 4000000 spots for SRR766607/SRR766607.sra Written 4000000 spots for SRR766607/SRR766607.sra 2020-06-15T23:08:31 prefetch.2.10.7: 1) Downloading 'SRR766608'... 2020-06-15T23:08:31 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:09:10 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:09:10 prefetch.2.10.7: 'SRR766608' is valid 2020-06-15T23:09:10 prefetch.2.10.7: 1) 'SRR766608' was downloaded successfully Read 4000000 spots for SRR766608/SRR766608.sra Written 4000000 spots for SRR766608/SRR766608.sra 2020-06-15T23:09:39 prefetch.2.10.7: 1) Downloading 'SRR766609'... 2020-06-15T23:09:39 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:10:10 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:10:10 prefetch.2.10.7: 'SRR766609' is valid 2020-06-15T23:10:10 prefetch.2.10.7: 1) 'SRR766609' was downloaded successfully Read 4000000 spots for SRR766609/SRR766609.sra Written 4000000 spots for SRR766609/SRR766609.sra 2020-06-15T23:10:40 prefetch.2.10.7: 1) Downloading 'SRR766610'... 2020-06-15T23:10:40 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:11:23 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:11:23 prefetch.2.10.7: 'SRR766610' is valid 2020-06-15T23:11:23 prefetch.2.10.7: 1) 'SRR766610' was downloaded successfully Read 4000000 spots for SRR766610/SRR766610.sra Written 4000000 spots for SRR766610/SRR766610.sra 2020-06-15T23:11:53 prefetch.2.10.7: 1) Downloading 'SRR766611'... 2020-06-15T23:11:53 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:12:37 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:12:38 prefetch.2.10.7: 'SRR766611' is valid 2020-06-15T23:12:38 prefetch.2.10.7: 1) 'SRR766611' was downloaded successfully Read 4000000 spots for SRR766611/SRR766611.sra Written 4000000 spots for SRR766611/SRR766611.sra 2020-06-15T23:13:08 prefetch.2.10.7: 1) Downloading 'SRR766612'... 2020-06-15T23:13:08 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:13:36 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:13:36 prefetch.2.10.7: 'SRR766612' is valid 2020-06-15T23:13:36 prefetch.2.10.7: 1) 'SRR766612' was downloaded successfully Read 4000000 spots for SRR766612/SRR766612.sra Written 4000000 spots for SRR766612/SRR766612.sra 2020-06-15T23:14:05 prefetch.2.10.7: 1) Downloading 'SRR766613'... 2020-06-15T23:14:05 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:14:36 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:14:36 prefetch.2.10.7: 'SRR766613' is valid 2020-06-15T23:14:36 prefetch.2.10.7: 1) 'SRR766613' was downloaded successfully Read 4000000 spots for SRR766613/SRR766613.sra Written 4000000 spots for SRR766613/SRR766613.sra 2020-06-15T23:15:05 prefetch.2.10.7: 1) Downloading 'SRR766614'... 2020-06-15T23:15:05 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:15:48 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:15:48 prefetch.2.10.7: 'SRR766614' is valid 2020-06-15T23:15:48 prefetch.2.10.7: 1) 'SRR766614' was downloaded successfully Read 4000000 spots for SRR766614/SRR766614.sra Written 4000000 spots for SRR766614/SRR766614.sra 2020-06-15T23:16:19 prefetch.2.10.7: 1) Downloading 'SRR766615'... 2020-06-15T23:16:19 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:16:58 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:16:59 prefetch.2.10.7: 'SRR766615' is valid 2020-06-15T23:16:59 prefetch.2.10.7: 1) 'SRR766615' was downloaded successfully Read 4000000 spots for SRR766615/SRR766615.sra Written 4000000 spots for SRR766615/SRR766615.sra 2020-06-15T23:17:31 prefetch.2.10.7: 1) Downloading 'SRR766616'... 2020-06-15T23:17:31 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:18:08 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:18:09 prefetch.2.10.7: 'SRR766616' is valid 2020-06-15T23:18:09 prefetch.2.10.7: 1) 'SRR766616' was downloaded successfully Read 4000000 spots for SRR766616/SRR766616.sra Written 4000000 spots for SRR766616/SRR766616.sra 2020-06-15T23:18:39 prefetch.2.10.7: 1) Downloading 'SRR766617'... 2020-06-15T23:18:39 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:19:20 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:19:20 prefetch.2.10.7: 'SRR766617' is valid 2020-06-15T23:19:20 prefetch.2.10.7: 1) 'SRR766617' was downloaded successfully Read 4000000 spots for SRR766617/SRR766617.sra Written 4000000 spots for SRR766617/SRR766617.sra 2020-06-15T23:19:50 prefetch.2.10.7: 1) Downloading 'SRR766618'... 2020-06-15T23:19:50 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:20:24 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:20:24 prefetch.2.10.7: 'SRR766618' is valid 2020-06-15T23:20:24 prefetch.2.10.7: 1) 'SRR766618' was downloaded successfully Read 4000000 spots for SRR766618/SRR766618.sra Written 4000000 spots for SRR766618/SRR766618.sra 2020-06-15T23:20:54 prefetch.2.10.7: 1) Downloading 'SRR766619'... 2020-06-15T23:20:54 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:21:29 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:21:30 prefetch.2.10.7: 'SRR766619' is valid 2020-06-15T23:21:30 prefetch.2.10.7: 1) 'SRR766619' was downloaded successfully Read 4000000 spots for SRR766619/SRR766619.sra Written 4000000 spots for SRR766619/SRR766619.sra 2020-06-15T23:21:59 prefetch.2.10.7: 1) Downloading 'SRR766620'... 2020-06-15T23:21:59 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:22:36 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:22:37 prefetch.2.10.7: 'SRR766620' is valid 2020-06-15T23:22:37 prefetch.2.10.7: 1) 'SRR766620' was downloaded successfully Read 4000000 spots for SRR766620/SRR766620.sra Written 4000000 spots for SRR766620/SRR766620.sra 2020-06-15T23:23:06 prefetch.2.10.7: 1) Downloading 'SRR766621'... 2020-06-15T23:23:06 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:23:43 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:23:44 prefetch.2.10.7: 'SRR766621' is valid 2020-06-15T23:23:44 prefetch.2.10.7: 1) 'SRR766621' was downloaded successfully Read 4000000 spots for SRR766621/SRR766621.sra Written 4000000 spots for SRR766621/SRR766621.sra 2020-06-15T23:24:13 prefetch.2.10.7: 1) Downloading 'SRR766622'... 2020-06-15T23:24:13 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:24:44 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:24:44 prefetch.2.10.7: 'SRR766622' is valid 2020-06-15T23:24:44 prefetch.2.10.7: 1) 'SRR766622' was downloaded successfully Read 4000000 spots for SRR766622/SRR766622.sra Written 4000000 spots for SRR766622/SRR766622.sra 2020-06-15T23:25:14 prefetch.2.10.7: 1) Downloading 'SRR766623'... 2020-06-15T23:25:14 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:26:13 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:26:14 prefetch.2.10.7: 'SRR766623' is valid 2020-06-15T23:26:14 prefetch.2.10.7: 1) 'SRR766623' was downloaded successfully Read 4000000 spots for SRR766623/SRR766623.sra Written 4000000 spots for SRR766623/SRR766623.sra 2020-06-15T23:26:43 prefetch.2.10.7: 1) Downloading 'SRR766624'... 2020-06-15T23:26:43 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:27:28 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:27:28 prefetch.2.10.7: 'SRR766624' is valid 2020-06-15T23:27:28 prefetch.2.10.7: 1) 'SRR766624' was downloaded successfully Read 4000000 spots for SRR766624/SRR766624.sra Written 4000000 spots for SRR766624/SRR766624.sra 2020-06-15T23:27:59 prefetch.2.10.7: 1) Downloading 'SRR766625'... 2020-06-15T23:27:59 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:29:08 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:29:08 prefetch.2.10.7: 'SRR766625' is valid 2020-06-15T23:29:08 prefetch.2.10.7: 1) 'SRR766625' was downloaded successfully Read 4000000 spots for SRR766625/SRR766625.sra Written 4000000 spots for SRR766625/SRR766625.sra 2020-06-15T23:29:38 prefetch.2.10.7: 1) Downloading 'SRR766626'... 2020-06-15T23:29:38 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:31:02 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:31:02 prefetch.2.10.7: 'SRR766626' is valid 2020-06-15T23:31:02 prefetch.2.10.7: 1) 'SRR766626' was downloaded successfully Read 4000000 spots for SRR766626/SRR766626.sra Written 4000000 spots for SRR766626/SRR766626.sra 2020-06-15T23:31:31 prefetch.2.10.7: 1) Downloading 'SRR766627'... 2020-06-15T23:31:31 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:32:07 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:32:07 prefetch.2.10.7: 'SRR766627' is valid 2020-06-15T23:32:07 prefetch.2.10.7: 1) 'SRR766627' was downloaded successfully Read 4000000 spots for SRR766627/SRR766627.sra Written 4000000 spots for SRR766627/SRR766627.sra 2020-06-15T23:32:36 prefetch.2.10.7: 1) Downloading 'SRR766628'... 2020-06-15T23:32:36 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:33:30 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:33:30 prefetch.2.10.7: 'SRR766628' is valid 2020-06-15T23:33:30 prefetch.2.10.7: 1) 'SRR766628' was downloaded successfully Read 4000000 spots for SRR766628/SRR766628.sra Written 4000000 spots for SRR766628/SRR766628.sra 2020-06-15T23:34:00 prefetch.2.10.7: 1) Downloading 'SRR766629'... 2020-06-15T23:34:00 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:34:57 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:34:58 prefetch.2.10.7: 'SRR766629' is valid 2020-06-15T23:34:58 prefetch.2.10.7: 1) 'SRR766629' was downloaded successfully Read 4000000 spots for SRR766629/SRR766629.sra Written 4000000 spots for SRR766629/SRR766629.sra 2020-06-15T23:35:26 prefetch.2.10.7: 1) Downloading 'SRR766630'... 2020-06-15T23:35:26 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:36:30 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:36:30 prefetch.2.10.7: 'SRR766630' is valid 2020-06-15T23:36:30 prefetch.2.10.7: 1) 'SRR766630' was downloaded successfully Read 4000000 spots for SRR766630/SRR766630.sra Written 4000000 spots for SRR766630/SRR766630.sra 2020-06-15T23:36:58 prefetch.2.10.7: 1) Downloading 'SRR766631'... 2020-06-15T23:36:58 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:37:59 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:37:59 prefetch.2.10.7: 'SRR766631' is valid 2020-06-15T23:37:59 prefetch.2.10.7: 1) 'SRR766631' was downloaded successfully Read 4000000 spots for SRR766631/SRR766631.sra Written 4000000 spots for SRR766631/SRR766631.sra 2020-06-15T23:38:28 prefetch.2.10.7: 1) Downloading 'SRR766632'... 2020-06-15T23:38:28 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:39:17 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:39:17 prefetch.2.10.7: 'SRR766632' is valid 2020-06-15T23:39:17 prefetch.2.10.7: 1) 'SRR766632' was downloaded successfully Read 4000000 spots for SRR766632/SRR766632.sra Written 4000000 spots for SRR766632/SRR766632.sra 2020-06-15T23:39:46 prefetch.2.10.7: 1) Downloading 'SRR766633'... 2020-06-15T23:39:46 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:40:33 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:40:34 prefetch.2.10.7: 'SRR766633' is valid 2020-06-15T23:40:34 prefetch.2.10.7: 1) 'SRR766633' was downloaded successfully Read 4000000 spots for SRR766633/SRR766633.sra Written 4000000 spots for SRR766633/SRR766633.sra 2020-06-15T23:41:02 prefetch.2.10.7: 1) Downloading 'SRR766634'... 2020-06-15T23:41:02 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:41:53 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:41:53 prefetch.2.10.7: 'SRR766634' is valid 2020-06-15T23:41:53 prefetch.2.10.7: 1) 'SRR766634' was downloaded successfully Read 4000000 spots for SRR766634/SRR766634.sra Written 4000000 spots for SRR766634/SRR766634.sra 2020-06-15T23:42:22 prefetch.2.10.7: 1) Downloading 'SRR766635'... 2020-06-15T23:42:22 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:43:31 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:43:31 prefetch.2.10.7: 'SRR766635' is valid 2020-06-15T23:43:31 prefetch.2.10.7: 1) 'SRR766635' was downloaded successfully Read 4000000 spots for SRR766635/SRR766635.sra Written 4000000 spots for SRR766635/SRR766635.sra 2020-06-15T23:44:00 prefetch.2.10.7: 1) Downloading 'SRR766636'... 2020-06-15T23:44:00 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:45:03 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:45:03 prefetch.2.10.7: 'SRR766636' is valid 2020-06-15T23:45:03 prefetch.2.10.7: 1) 'SRR766636' was downloaded successfully Read 4000000 spots for SRR766636/SRR766636.sra Written 4000000 spots for SRR766636/SRR766636.sra 2020-06-15T23:45:34 prefetch.2.10.7: 1) Downloading 'SRR766637'... 2020-06-15T23:45:34 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:46:29 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:46:29 prefetch.2.10.7: 'SRR766637' is valid 2020-06-15T23:46:29 prefetch.2.10.7: 1) 'SRR766637' was downloaded successfully Read 4000000 spots for SRR766637/SRR766637.sra Written 4000000 spots for SRR766637/SRR766637.sra 2020-06-15T23:46:58 prefetch.2.10.7: 1) Downloading 'SRR766638'... 2020-06-15T23:46:59 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:48:13 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:48:13 prefetch.2.10.7: 'SRR766638' is valid 2020-06-15T23:48:13 prefetch.2.10.7: 1) 'SRR766638' was downloaded successfully Read 4000000 spots for SRR766638/SRR766638.sra Written 4000000 spots for SRR766638/SRR766638.sra 2020-06-15T23:48:42 prefetch.2.10.7: 1) Downloading 'SRR766639'... 2020-06-15T23:48:42 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:49:50 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:49:51 prefetch.2.10.7: 'SRR766639' is valid 2020-06-15T23:49:51 prefetch.2.10.7: 1) 'SRR766639' was downloaded successfully Read 4000000 spots for SRR766639/SRR766639.sra Written 4000000 spots for SRR766639/SRR766639.sra 2020-06-15T23:50:23 prefetch.2.10.7: 1) Downloading 'SRR766640'... 2020-06-15T23:50:23 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:50:42 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:50:42 prefetch.2.10.7: 'SRR766640' is valid 2020-06-15T23:50:42 prefetch.2.10.7: 1) 'SRR766640' was downloaded successfully Read 789812 spots for SRR766640/SRR766640.sra Written 789812 spots for SRR766640/SRR766640.sra 2020-06-15T23:50:57 prefetch.2.10.7: 1) Downloading 'SRR766641'... 2020-06-15T23:50:57 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:51:28 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:51:28 prefetch.2.10.7: 'SRR766641' is valid 2020-06-15T23:51:28 prefetch.2.10.7: 1) 'SRR766641' was downloaded successfully Read 4000000 spots for SRR766641/SRR766641.sra Written 4000000 spots for SRR766641/SRR766641.sra 2020-06-15T23:51:58 prefetch.2.10.7: 1) Downloading 'SRR766642'... 2020-06-15T23:51:58 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:52:49 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:52:49 prefetch.2.10.7: 'SRR766642' is valid 2020-06-15T23:52:49 prefetch.2.10.7: 1) 'SRR766642' was downloaded successfully Read 4000000 spots for SRR766642/SRR766642.sra Written 4000000 spots for SRR766642/SRR766642.sra 2020-06-15T23:53:19 prefetch.2.10.7: 1) Downloading 'SRR766643'... 2020-06-15T23:53:19 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:54:10 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:54:10 prefetch.2.10.7: 'SRR766643' is valid 2020-06-15T23:54:10 prefetch.2.10.7: 1) 'SRR766643' was downloaded successfully Read 4000000 spots for SRR766643/SRR766643.sra Written 4000000 spots for SRR766643/SRR766643.sra 2020-06-15T23:54:42 prefetch.2.10.7: 1) Downloading 'SRR766644'... 2020-06-15T23:54:42 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:55:21 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:55:21 prefetch.2.10.7: 'SRR766644' is valid 2020-06-15T23:55:21 prefetch.2.10.7: 1) 'SRR766644' was downloaded successfully Read 4000000 spots for SRR766644/SRR766644.sra Written 4000000 spots for SRR766644/SRR766644.sra 2020-06-15T23:55:56 prefetch.2.10.7: 1) Downloading 'SRR766645'... 2020-06-15T23:55:56 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:56:47 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:56:48 prefetch.2.10.7: 'SRR766645' is valid 2020-06-15T23:56:48 prefetch.2.10.7: 1) 'SRR766645' was downloaded successfully Read 4000000 spots for SRR766645/SRR766645.sra Written 4000000 spots for SRR766645/SRR766645.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:35:25 184789812 reads; of these: 184789812 (100.00%) were paired; of these: 167448263 (90.62%) aligned concordantly 0 times 14450003 (7.82%) aligned concordantly exactly 1 time 2891546 (1.56%) aligned concordantly >1 times ---- 167448263 pairs aligned concordantly 0 times; of these: 89522 (0.05%) aligned discordantly 1 time ---- 167358741 pairs aligned 0 times concordantly or discordantly; of these: 334717482 mates make up the pairs; of these: 333202150 (99.55%) aligned 0 times 833826 (0.25%) aligned exactly 1 time 681506 (0.20%) aligned >1 times 9.84% overall alignment rate Time searching: 00:35:25 Overall time: 00:35:25 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 12 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 9904410 / 17356866 = 0.5706 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 09:42:14: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX246038/SRX246038.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX246038/SRX246038.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX246038/SRX246038.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX246038/SRX246038.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 09:42:14: #1 read tag files... INFO @ Tue, 16 Jun 2020 09:42:14: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 09:42:19: 1000000 INFO @ Tue, 16 Jun 2020 09:42:24: 2000000 INFO @ Tue, 16 Jun 2020 09:42:28: 3000000 INFO @ Tue, 16 Jun 2020 09:42:33: 4000000 INFO @ Tue, 16 Jun 2020 09:42:38: 5000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 09:42:43: 6000000 INFO @ Tue, 16 Jun 2020 09:42:44: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX246038/SRX246038.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX246038/SRX246038.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX246038/SRX246038.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX246038/SRX246038.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 09:42:44: #1 read tag files... INFO @ Tue, 16 Jun 2020 09:42:44: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 09:42:48: 7000000 INFO @ Tue, 16 Jun 2020 09:42:49: 1000000 INFO @ Tue, 16 Jun 2020 09:42:53: 8000000 INFO @ Tue, 16 Jun 2020 09:42:54: 2000000 INFO @ Tue, 16 Jun 2020 09:42:57: 9000000 INFO @ Tue, 16 Jun 2020 09:42:59: 3000000 INFO @ Tue, 16 Jun 2020 09:43:02: 10000000 INFO @ Tue, 16 Jun 2020 09:43:04: 4000000 INFO @ Tue, 16 Jun 2020 09:43:07: 11000000 INFO @ Tue, 16 Jun 2020 09:43:09: 5000000 INFO @ Tue, 16 Jun 2020 09:43:11: 12000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 09:43:14: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX246038/SRX246038.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX246038/SRX246038.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX246038/SRX246038.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX246038/SRX246038.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 09:43:14: #1 read tag files... INFO @ Tue, 16 Jun 2020 09:43:14: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 09:43:14: 6000000 INFO @ Tue, 16 Jun 2020 09:43:16: 13000000 INFO @ Tue, 16 Jun 2020 09:43:19: 1000000 INFO @ Tue, 16 Jun 2020 09:43:19: 7000000 INFO @ Tue, 16 Jun 2020 09:43:21: 14000000 INFO @ Tue, 16 Jun 2020 09:43:24: 8000000 INFO @ Tue, 16 Jun 2020 09:43:24: 2000000 INFO @ Tue, 16 Jun 2020 09:43:25: 15000000 INFO @ Tue, 16 Jun 2020 09:43:28: 9000000 INFO @ Tue, 16 Jun 2020 09:43:29: 3000000 INFO @ Tue, 16 Jun 2020 09:43:30: 16000000 INFO @ Tue, 16 Jun 2020 09:43:33: #1 tag size is determined as 25 bps INFO @ Tue, 16 Jun 2020 09:43:33: #1 tag size = 25 INFO @ Tue, 16 Jun 2020 09:43:33: #1 total tags in treatment: 7498664 INFO @ Tue, 16 Jun 2020 09:43:33: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 09:43:33: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 09:43:33: #1 tags after filtering in treatment: 6424346 INFO @ Tue, 16 Jun 2020 09:43:33: #1 Redundant rate of treatment: 0.14 INFO @ Tue, 16 Jun 2020 09:43:33: #1 finished! INFO @ Tue, 16 Jun 2020 09:43:33: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 09:43:33: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 09:43:33: 10000000 INFO @ Tue, 16 Jun 2020 09:43:33: #2 number of paired peaks: 536 WARNING @ Tue, 16 Jun 2020 09:43:33: Fewer paired peaks (536) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 536 pairs to build model! INFO @ Tue, 16 Jun 2020 09:43:33: start model_add_line... INFO @ Tue, 16 Jun 2020 09:43:33: start X-correlation... INFO @ Tue, 16 Jun 2020 09:43:33: end of X-cor INFO @ Tue, 16 Jun 2020 09:43:33: #2 finished! INFO @ Tue, 16 Jun 2020 09:43:33: #2 predicted fragment length is 117 bps INFO @ Tue, 16 Jun 2020 09:43:33: #2 alternative fragment length(s) may be 3,117,139 bps INFO @ Tue, 16 Jun 2020 09:43:33: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX246038/SRX246038.05_model.r INFO @ Tue, 16 Jun 2020 09:43:33: #3 Call peaks... INFO @ Tue, 16 Jun 2020 09:43:33: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 16 Jun 2020 09:43:34: 4000000 INFO @ Tue, 16 Jun 2020 09:43:38: 11000000 INFO @ Tue, 16 Jun 2020 09:43:40: 5000000 INFO @ Tue, 16 Jun 2020 09:43:42: 12000000 INFO @ Tue, 16 Jun 2020 09:43:45: 6000000 INFO @ Tue, 16 Jun 2020 09:43:47: #3 Call peaks for each chromosome... INFO @ Tue, 16 Jun 2020 09:43:47: 13000000 INFO @ Tue, 16 Jun 2020 09:43:49: 7000000 INFO @ Tue, 16 Jun 2020 09:43:52: 14000000 INFO @ Tue, 16 Jun 2020 09:43:53: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX246038/SRX246038.05_peaks.xls INFO @ Tue, 16 Jun 2020 09:43:53: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX246038/SRX246038.05_peaks.narrowPeak INFO @ Tue, 16 Jun 2020 09:43:53: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX246038/SRX246038.05_summits.bed INFO @ Tue, 16 Jun 2020 09:43:53: Done! pass1 - making usageList (7 chroms): 0 millis pass2 - checking and writing primary data (385 records, 4 fields): 2 millis CompletedMACS2peakCalling INFO @ Tue, 16 Jun 2020 09:43:54: 8000000 INFO @ Tue, 16 Jun 2020 09:43:56: 15000000 INFO @ Tue, 16 Jun 2020 09:43:59: 9000000 INFO @ Tue, 16 Jun 2020 09:44:01: 16000000 INFO @ Tue, 16 Jun 2020 09:44:03: #1 tag size is determined as 25 bps INFO @ Tue, 16 Jun 2020 09:44:03: #1 tag size = 25 INFO @ Tue, 16 Jun 2020 09:44:03: #1 total tags in treatment: 7498664 INFO @ Tue, 16 Jun 2020 09:44:03: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 09:44:03: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 09:44:03: 10000000 INFO @ Tue, 16 Jun 2020 09:44:04: #1 tags after filtering in treatment: 6424346 INFO @ Tue, 16 Jun 2020 09:44:04: #1 Redundant rate of treatment: 0.14 INFO @ Tue, 16 Jun 2020 09:44:04: #1 finished! INFO @ Tue, 16 Jun 2020 09:44:04: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 09:44:04: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 09:44:04: #2 number of paired peaks: 536 WARNING @ Tue, 16 Jun 2020 09:44:04: Fewer paired peaks (536) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 536 pairs to build model! INFO @ Tue, 16 Jun 2020 09:44:04: start model_add_line... INFO @ Tue, 16 Jun 2020 09:44:04: start X-correlation... INFO @ Tue, 16 Jun 2020 09:44:04: end of X-cor INFO @ Tue, 16 Jun 2020 09:44:04: #2 finished! INFO @ Tue, 16 Jun 2020 09:44:04: #2 predicted fragment length is 117 bps INFO @ Tue, 16 Jun 2020 09:44:04: #2 alternative fragment length(s) may be 3,117,139 bps INFO @ Tue, 16 Jun 2020 09:44:04: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX246038/SRX246038.10_model.r INFO @ Tue, 16 Jun 2020 09:44:04: #3 Call peaks... INFO @ Tue, 16 Jun 2020 09:44:04: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 16 Jun 2020 09:44:08: 11000000 INFO @ Tue, 16 Jun 2020 09:44:12: 12000000 INFO @ Tue, 16 Jun 2020 09:44:17: 13000000 INFO @ Tue, 16 Jun 2020 09:44:17: #3 Call peaks for each chromosome... INFO @ Tue, 16 Jun 2020 09:44:21: 14000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 16 Jun 2020 09:44:24: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX246038/SRX246038.10_peaks.xls INFO @ Tue, 16 Jun 2020 09:44:24: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX246038/SRX246038.10_peaks.narrowPeak INFO @ Tue, 16 Jun 2020 09:44:24: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX246038/SRX246038.10_summits.bed INFO @ Tue, 16 Jun 2020 09:44:24: Done! pass1 - making usageList (6 chroms): 0 millis pass2 - checking and writing primary data (229 records, 4 fields): 1 millis CompletedMACS2peakCalling INFO @ Tue, 16 Jun 2020 09:44:25: 15000000 INFO @ Tue, 16 Jun 2020 09:44:30: 16000000 INFO @ Tue, 16 Jun 2020 09:44:32: #1 tag size is determined as 25 bps INFO @ Tue, 16 Jun 2020 09:44:32: #1 tag size = 25 INFO @ Tue, 16 Jun 2020 09:44:32: #1 total tags in treatment: 7498664 INFO @ Tue, 16 Jun 2020 09:44:32: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 09:44:32: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 09:44:32: #1 tags after filtering in treatment: 6424346 INFO @ Tue, 16 Jun 2020 09:44:32: #1 Redundant rate of treatment: 0.14 INFO @ Tue, 16 Jun 2020 09:44:32: #1 finished! INFO @ Tue, 16 Jun 2020 09:44:32: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 09:44:32: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 09:44:33: #2 number of paired peaks: 536 WARNING @ Tue, 16 Jun 2020 09:44:33: Fewer paired peaks (536) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 536 pairs to build model! INFO @ Tue, 16 Jun 2020 09:44:33: start model_add_line... INFO @ Tue, 16 Jun 2020 09:44:33: start X-correlation... INFO @ Tue, 16 Jun 2020 09:44:33: end of X-cor INFO @ Tue, 16 Jun 2020 09:44:33: #2 finished! INFO @ Tue, 16 Jun 2020 09:44:33: #2 predicted fragment length is 117 bps INFO @ Tue, 16 Jun 2020 09:44:33: #2 alternative fragment length(s) may be 3,117,139 bps INFO @ Tue, 16 Jun 2020 09:44:33: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX246038/SRX246038.20_model.r INFO @ Tue, 16 Jun 2020 09:44:33: #3 Call peaks... INFO @ Tue, 16 Jun 2020 09:44:33: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 16 Jun 2020 09:44:45: #3 Call peaks for each chromosome... BigWig に変換しました。 INFO @ Tue, 16 Jun 2020 09:44:52: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX246038/SRX246038.20_peaks.xls INFO @ Tue, 16 Jun 2020 09:44:52: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX246038/SRX246038.20_peaks.narrowPeak INFO @ Tue, 16 Jun 2020 09:44:52: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX246038/SRX246038.20_summits.bed INFO @ Tue, 16 Jun 2020 09:44:52: Done! pass1 - making usageList (6 chroms): 1 millis pass2 - checking and writing primary data (115 records, 4 fields): 1 millis CompletedMACS2peakCalling