Job ID = 6366878 SRX = SRX246027 Genome = ce11 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2020-06-15T23:04:08 prefetch.2.10.7: 1) Downloading 'SRR766142'... 2020-06-15T23:04:08 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:04:39 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:04:39 prefetch.2.10.7: 'SRR766142' is valid 2020-06-15T23:04:39 prefetch.2.10.7: 1) 'SRR766142' was downloaded successfully Read 4000000 spots for SRR766142/SRR766142.sra Written 4000000 spots for SRR766142/SRR766142.sra 2020-06-15T23:05:08 prefetch.2.10.7: 1) Downloading 'SRR766143'... 2020-06-15T23:05:08 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:05:39 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:05:39 prefetch.2.10.7: 'SRR766143' is valid 2020-06-15T23:05:39 prefetch.2.10.7: 1) 'SRR766143' was downloaded successfully Read 4000000 spots for SRR766143/SRR766143.sra Written 4000000 spots for SRR766143/SRR766143.sra 2020-06-15T23:06:08 prefetch.2.10.7: 1) Downloading 'SRR766144'... 2020-06-15T23:06:08 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:06:33 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:06:33 prefetch.2.10.7: 'SRR766144' is valid 2020-06-15T23:06:33 prefetch.2.10.7: 1) 'SRR766144' was downloaded successfully Read 4000000 spots for SRR766144/SRR766144.sra Written 4000000 spots for SRR766144/SRR766144.sra 2020-06-15T23:07:02 prefetch.2.10.7: 1) Downloading 'SRR766145'... 2020-06-15T23:07:02 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:07:26 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:07:26 prefetch.2.10.7: 'SRR766145' is valid 2020-06-15T23:07:26 prefetch.2.10.7: 1) 'SRR766145' was downloaded successfully Read 4000000 spots for SRR766145/SRR766145.sra Written 4000000 spots for SRR766145/SRR766145.sra 2020-06-15T23:07:55 prefetch.2.10.7: 1) Downloading 'SRR766146'... 2020-06-15T23:07:55 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:08:26 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:08:26 prefetch.2.10.7: 'SRR766146' is valid 2020-06-15T23:08:26 prefetch.2.10.7: 1) 'SRR766146' was downloaded successfully Read 4000000 spots for SRR766146/SRR766146.sra Written 4000000 spots for SRR766146/SRR766146.sra 2020-06-15T23:08:56 prefetch.2.10.7: 1) Downloading 'SRR766147'... 2020-06-15T23:08:56 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:09:23 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:09:23 prefetch.2.10.7: 'SRR766147' is valid 2020-06-15T23:09:23 prefetch.2.10.7: 1) 'SRR766147' was downloaded successfully Read 4000000 spots for SRR766147/SRR766147.sra Written 4000000 spots for SRR766147/SRR766147.sra 2020-06-15T23:09:52 prefetch.2.10.7: 1) Downloading 'SRR766148'... 2020-06-15T23:09:52 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:10:42 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:10:42 prefetch.2.10.7: 'SRR766148' is valid 2020-06-15T23:10:42 prefetch.2.10.7: 1) 'SRR766148' was downloaded successfully Read 4000000 spots for SRR766148/SRR766148.sra Written 4000000 spots for SRR766148/SRR766148.sra 2020-06-15T23:11:11 prefetch.2.10.7: 1) Downloading 'SRR766149'... 2020-06-15T23:11:11 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:11:37 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:11:37 prefetch.2.10.7: 'SRR766149' is valid 2020-06-15T23:11:37 prefetch.2.10.7: 1) 'SRR766149' was downloaded successfully Read 4000000 spots for SRR766149/SRR766149.sra Written 4000000 spots for SRR766149/SRR766149.sra 2020-06-15T23:12:06 prefetch.2.10.7: 1) Downloading 'SRR766150'... 2020-06-15T23:12:06 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:12:43 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:12:43 prefetch.2.10.7: 'SRR766150' is valid 2020-06-15T23:12:43 prefetch.2.10.7: 1) 'SRR766150' was downloaded successfully Read 4000000 spots for SRR766150/SRR766150.sra Written 4000000 spots for SRR766150/SRR766150.sra 2020-06-15T23:13:12 prefetch.2.10.7: 1) Downloading 'SRR766151'... 2020-06-15T23:13:12 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:13:41 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:13:41 prefetch.2.10.7: 'SRR766151' is valid 2020-06-15T23:13:41 prefetch.2.10.7: 1) 'SRR766151' was downloaded successfully Read 4000000 spots for SRR766151/SRR766151.sra Written 4000000 spots for SRR766151/SRR766151.sra 2020-06-15T23:14:10 prefetch.2.10.7: 1) Downloading 'SRR766152'... 2020-06-15T23:14:10 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:14:38 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:14:38 prefetch.2.10.7: 'SRR766152' is valid 2020-06-15T23:14:38 prefetch.2.10.7: 1) 'SRR766152' was downloaded successfully Read 4000000 spots for SRR766152/SRR766152.sra Written 4000000 spots for SRR766152/SRR766152.sra 2020-06-15T23:15:07 prefetch.2.10.7: 1) Downloading 'SRR766153'... 2020-06-15T23:15:07 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:15:50 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:15:50 prefetch.2.10.7: 'SRR766153' is valid 2020-06-15T23:15:50 prefetch.2.10.7: 1) 'SRR766153' was downloaded successfully Read 4000000 spots for SRR766153/SRR766153.sra Written 4000000 spots for SRR766153/SRR766153.sra 2020-06-15T23:16:21 prefetch.2.10.7: 1) Downloading 'SRR766154'... 2020-06-15T23:16:21 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:16:48 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:16:48 prefetch.2.10.7: 'SRR766154' is valid 2020-06-15T23:16:48 prefetch.2.10.7: 1) 'SRR766154' was downloaded successfully Read 4000000 spots for SRR766154/SRR766154.sra Written 4000000 spots for SRR766154/SRR766154.sra 2020-06-15T23:17:18 prefetch.2.10.7: 1) Downloading 'SRR766155'... 2020-06-15T23:17:18 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:17:47 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:17:47 prefetch.2.10.7: 'SRR766155' is valid 2020-06-15T23:17:47 prefetch.2.10.7: 1) 'SRR766155' was downloaded successfully Read 4000000 spots for SRR766155/SRR766155.sra Written 4000000 spots for SRR766155/SRR766155.sra 2020-06-15T23:18:17 prefetch.2.10.7: 1) Downloading 'SRR766156'... 2020-06-15T23:18:17 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:18:52 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:18:52 prefetch.2.10.7: 'SRR766156' is valid 2020-06-15T23:18:52 prefetch.2.10.7: 1) 'SRR766156' was downloaded successfully Read 4000000 spots for SRR766156/SRR766156.sra Written 4000000 spots for SRR766156/SRR766156.sra 2020-06-15T23:19:23 prefetch.2.10.7: 1) Downloading 'SRR766157'... 2020-06-15T23:19:23 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:19:57 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:19:57 prefetch.2.10.7: 'SRR766157' is valid 2020-06-15T23:19:57 prefetch.2.10.7: 1) 'SRR766157' was downloaded successfully Read 4000000 spots for SRR766157/SRR766157.sra Written 4000000 spots for SRR766157/SRR766157.sra 2020-06-15T23:20:27 prefetch.2.10.7: 1) Downloading 'SRR766158'... 2020-06-15T23:20:27 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:21:02 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:21:02 prefetch.2.10.7: 'SRR766158' is valid 2020-06-15T23:21:02 prefetch.2.10.7: 1) 'SRR766158' was downloaded successfully Read 4000000 spots for SRR766158/SRR766158.sra Written 4000000 spots for SRR766158/SRR766158.sra 2020-06-15T23:21:31 prefetch.2.10.7: 1) Downloading 'SRR766159'... 2020-06-15T23:21:31 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:22:08 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:22:08 prefetch.2.10.7: 'SRR766159' is valid 2020-06-15T23:22:08 prefetch.2.10.7: 1) 'SRR766159' was downloaded successfully Read 4000000 spots for SRR766159/SRR766159.sra Written 4000000 spots for SRR766159/SRR766159.sra 2020-06-15T23:22:39 prefetch.2.10.7: 1) Downloading 'SRR766160'... 2020-06-15T23:22:39 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:23:10 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:23:10 prefetch.2.10.7: 'SRR766160' is valid 2020-06-15T23:23:10 prefetch.2.10.7: 1) 'SRR766160' was downloaded successfully Read 4000000 spots for SRR766160/SRR766160.sra Written 4000000 spots for SRR766160/SRR766160.sra 2020-06-15T23:23:40 prefetch.2.10.7: 1) Downloading 'SRR766161'... 2020-06-15T23:23:40 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:24:12 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:24:12 prefetch.2.10.7: 'SRR766161' is valid 2020-06-15T23:24:12 prefetch.2.10.7: 1) 'SRR766161' was downloaded successfully Read 4000000 spots for SRR766161/SRR766161.sra Written 4000000 spots for SRR766161/SRR766161.sra 2020-06-15T23:24:42 prefetch.2.10.7: 1) Downloading 'SRR766162'... 2020-06-15T23:24:42 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:25:14 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:25:14 prefetch.2.10.7: 'SRR766162' is valid 2020-06-15T23:25:14 prefetch.2.10.7: 1) 'SRR766162' was downloaded successfully Read 4000000 spots for SRR766162/SRR766162.sra Written 4000000 spots for SRR766162/SRR766162.sra 2020-06-15T23:25:44 prefetch.2.10.7: 1) Downloading 'SRR766163'... 2020-06-15T23:25:44 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:26:33 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:26:33 prefetch.2.10.7: 'SRR766163' is valid 2020-06-15T23:26:33 prefetch.2.10.7: 1) 'SRR766163' was downloaded successfully Read 4000000 spots for SRR766163/SRR766163.sra Written 4000000 spots for SRR766163/SRR766163.sra 2020-06-15T23:27:02 prefetch.2.10.7: 1) Downloading 'SRR766164'... 2020-06-15T23:27:02 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:27:41 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:27:41 prefetch.2.10.7: 'SRR766164' is valid 2020-06-15T23:27:41 prefetch.2.10.7: 1) 'SRR766164' was downloaded successfully Read 4000000 spots for SRR766164/SRR766164.sra Written 4000000 spots for SRR766164/SRR766164.sra 2020-06-15T23:28:11 prefetch.2.10.7: 1) Downloading 'SRR766165'... 2020-06-15T23:28:11 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:29:01 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:29:01 prefetch.2.10.7: 'SRR766165' is valid 2020-06-15T23:29:01 prefetch.2.10.7: 1) 'SRR766165' was downloaded successfully Read 4000000 spots for SRR766165/SRR766165.sra Written 4000000 spots for SRR766165/SRR766165.sra 2020-06-15T23:29:30 prefetch.2.10.7: 1) Downloading 'SRR766166'... 2020-06-15T23:29:30 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:30:51 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:30:51 prefetch.2.10.7: 'SRR766166' is valid 2020-06-15T23:30:51 prefetch.2.10.7: 1) 'SRR766166' was downloaded successfully Read 4000000 spots for SRR766166/SRR766166.sra Written 4000000 spots for SRR766166/SRR766166.sra 2020-06-15T23:31:20 prefetch.2.10.7: 1) Downloading 'SRR766167'... 2020-06-15T23:31:20 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:31:58 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:31:58 prefetch.2.10.7: 'SRR766167' is valid 2020-06-15T23:31:58 prefetch.2.10.7: 1) 'SRR766167' was downloaded successfully Read 4000000 spots for SRR766167/SRR766167.sra Written 4000000 spots for SRR766167/SRR766167.sra 2020-06-15T23:32:28 prefetch.2.10.7: 1) Downloading 'SRR766168'... 2020-06-15T23:32:28 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:33:46 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:33:46 prefetch.2.10.7: 'SRR766168' is valid 2020-06-15T23:33:46 prefetch.2.10.7: 1) 'SRR766168' was downloaded successfully Read 4000000 spots for SRR766168/SRR766168.sra Written 4000000 spots for SRR766168/SRR766168.sra 2020-06-15T23:34:15 prefetch.2.10.7: 1) Downloading 'SRR766169'... 2020-06-15T23:34:15 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:35:06 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:35:06 prefetch.2.10.7: 'SRR766169' is valid 2020-06-15T23:35:06 prefetch.2.10.7: 1) 'SRR766169' was downloaded successfully Read 2468528 spots for SRR766169/SRR766169.sra Written 2468528 spots for SRR766169/SRR766169.sra 2020-06-15T23:35:28 prefetch.2.10.7: 1) Downloading 'SRR766170'... 2020-06-15T23:35:28 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:36:33 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:36:33 prefetch.2.10.7: 'SRR766170' is valid 2020-06-15T23:36:33 prefetch.2.10.7: 1) 'SRR766170' was downloaded successfully Read 4000000 spots for SRR766170/SRR766170.sra Written 4000000 spots for SRR766170/SRR766170.sra 2020-06-15T23:37:01 prefetch.2.10.7: 1) Downloading 'SRR766171'... 2020-06-15T23:37:01 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:37:52 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:37:52 prefetch.2.10.7: 'SRR766171' is valid 2020-06-15T23:37:52 prefetch.2.10.7: 1) 'SRR766171' was downloaded successfully Read 4000000 spots for SRR766171/SRR766171.sra Written 4000000 spots for SRR766171/SRR766171.sra 2020-06-15T23:38:21 prefetch.2.10.7: 1) Downloading 'SRR766172'... 2020-06-15T23:38:21 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:39:42 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:39:42 prefetch.2.10.7: 'SRR766172' is valid 2020-06-15T23:39:43 prefetch.2.10.7: 1) 'SRR766172' was downloaded successfully Read 4000000 spots for SRR766172/SRR766172.sra Written 4000000 spots for SRR766172/SRR766172.sra 2020-06-15T23:40:11 prefetch.2.10.7: 1) Downloading 'SRR766173'... 2020-06-15T23:40:11 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:40:55 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:40:55 prefetch.2.10.7: 'SRR766173' is valid 2020-06-15T23:40:55 prefetch.2.10.7: 1) 'SRR766173' was downloaded successfully Read 4000000 spots for SRR766173/SRR766173.sra Written 4000000 spots for SRR766173/SRR766173.sra 2020-06-15T23:41:24 prefetch.2.10.7: 1) Downloading 'SRR766174'... 2020-06-15T23:41:24 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:42:18 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:42:18 prefetch.2.10.7: 'SRR766174' is valid 2020-06-15T23:42:18 prefetch.2.10.7: 1) 'SRR766174' was downloaded successfully Read 4000000 spots for SRR766174/SRR766174.sra Written 4000000 spots for SRR766174/SRR766174.sra 2020-06-15T23:42:49 prefetch.2.10.7: 1) Downloading 'SRR766175'... 2020-06-15T23:42:49 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:43:41 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:43:41 prefetch.2.10.7: 'SRR766175' is valid 2020-06-15T23:43:41 prefetch.2.10.7: 1) 'SRR766175' was downloaded successfully Read 4000000 spots for SRR766175/SRR766175.sra Written 4000000 spots for SRR766175/SRR766175.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:51:52 134468528 reads; of these: 134468528 (100.00%) were paired; of these: 75040967 (55.81%) aligned concordantly 0 times 50946563 (37.89%) aligned concordantly exactly 1 time 8480998 (6.31%) aligned concordantly >1 times ---- 75040967 pairs aligned concordantly 0 times; of these: 1951589 (2.60%) aligned discordantly 1 time ---- 73089378 pairs aligned 0 times concordantly or discordantly; of these: 146178756 mates make up the pairs; of these: 143219552 (97.98%) aligned 0 times 1250222 (0.86%) aligned exactly 1 time 1708982 (1.17%) aligned >1 times 46.75% overall alignment rate Time searching: 00:51:52 Overall time: 00:51:52 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 32 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 29441037 / 61333918 = 0.4800 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 09:55:57: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX246027/SRX246027.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX246027/SRX246027.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX246027/SRX246027.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX246027/SRX246027.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 09:55:57: #1 read tag files... INFO @ Tue, 16 Jun 2020 09:55:57: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 09:56:02: 1000000 INFO @ Tue, 16 Jun 2020 09:56:07: 2000000 INFO @ Tue, 16 Jun 2020 09:56:12: 3000000 INFO @ Tue, 16 Jun 2020 09:56:17: 4000000 INFO @ Tue, 16 Jun 2020 09:56:22: 5000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 09:56:27: 6000000 INFO @ Tue, 16 Jun 2020 09:56:27: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX246027/SRX246027.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX246027/SRX246027.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX246027/SRX246027.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX246027/SRX246027.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 09:56:27: #1 read tag files... INFO @ Tue, 16 Jun 2020 09:56:27: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 09:56:32: 7000000 INFO @ Tue, 16 Jun 2020 09:56:32: 1000000 INFO @ Tue, 16 Jun 2020 09:56:37: 8000000 INFO @ Tue, 16 Jun 2020 09:56:37: 2000000 INFO @ Tue, 16 Jun 2020 09:56:42: 9000000 INFO @ Tue, 16 Jun 2020 09:56:42: 3000000 INFO @ Tue, 16 Jun 2020 09:56:47: 10000000 INFO @ Tue, 16 Jun 2020 09:56:47: 4000000 INFO @ Tue, 16 Jun 2020 09:56:52: 11000000 INFO @ Tue, 16 Jun 2020 09:56:52: 5000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 09:56:57: 12000000 INFO @ Tue, 16 Jun 2020 09:56:57: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX246027/SRX246027.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX246027/SRX246027.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX246027/SRX246027.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX246027/SRX246027.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 09:56:57: #1 read tag files... INFO @ Tue, 16 Jun 2020 09:56:57: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 09:56:57: 6000000 INFO @ Tue, 16 Jun 2020 09:57:02: 13000000 INFO @ Tue, 16 Jun 2020 09:57:02: 1000000 INFO @ Tue, 16 Jun 2020 09:57:03: 7000000 INFO @ Tue, 16 Jun 2020 09:57:07: 14000000 INFO @ Tue, 16 Jun 2020 09:57:07: 2000000 INFO @ Tue, 16 Jun 2020 09:57:08: 8000000 INFO @ Tue, 16 Jun 2020 09:57:12: 15000000 INFO @ Tue, 16 Jun 2020 09:57:13: 3000000 INFO @ Tue, 16 Jun 2020 09:57:13: 9000000 INFO @ Tue, 16 Jun 2020 09:57:17: 16000000 INFO @ Tue, 16 Jun 2020 09:57:18: 4000000 INFO @ Tue, 16 Jun 2020 09:57:18: 10000000 INFO @ Tue, 16 Jun 2020 09:57:22: 17000000 INFO @ Tue, 16 Jun 2020 09:57:23: 5000000 INFO @ Tue, 16 Jun 2020 09:57:23: 11000000 INFO @ Tue, 16 Jun 2020 09:57:27: 18000000 INFO @ Tue, 16 Jun 2020 09:57:28: 6000000 INFO @ Tue, 16 Jun 2020 09:57:28: 12000000 INFO @ Tue, 16 Jun 2020 09:57:32: 19000000 INFO @ Tue, 16 Jun 2020 09:57:33: 7000000 INFO @ Tue, 16 Jun 2020 09:57:34: 13000000 INFO @ Tue, 16 Jun 2020 09:57:37: 20000000 INFO @ Tue, 16 Jun 2020 09:57:39: 8000000 INFO @ Tue, 16 Jun 2020 09:57:39: 14000000 INFO @ Tue, 16 Jun 2020 09:57:42: 21000000 INFO @ Tue, 16 Jun 2020 09:57:44: 9000000 INFO @ Tue, 16 Jun 2020 09:57:44: 15000000 INFO @ Tue, 16 Jun 2020 09:57:47: 22000000 INFO @ Tue, 16 Jun 2020 09:57:49: 10000000 INFO @ Tue, 16 Jun 2020 09:57:49: 16000000 INFO @ Tue, 16 Jun 2020 09:57:52: 23000000 INFO @ Tue, 16 Jun 2020 09:57:54: 11000000 INFO @ Tue, 16 Jun 2020 09:57:54: 17000000 INFO @ Tue, 16 Jun 2020 09:57:57: 24000000 INFO @ Tue, 16 Jun 2020 09:57:59: 12000000 INFO @ Tue, 16 Jun 2020 09:57:59: 18000000 INFO @ Tue, 16 Jun 2020 09:58:03: 25000000 INFO @ Tue, 16 Jun 2020 09:58:04: 13000000 INFO @ Tue, 16 Jun 2020 09:58:05: 19000000 INFO @ Tue, 16 Jun 2020 09:58:08: 26000000 INFO @ Tue, 16 Jun 2020 09:58:10: 14000000 INFO @ Tue, 16 Jun 2020 09:58:10: 20000000 INFO @ Tue, 16 Jun 2020 09:58:13: 27000000 INFO @ Tue, 16 Jun 2020 09:58:15: 15000000 INFO @ Tue, 16 Jun 2020 09:58:15: 21000000 INFO @ Tue, 16 Jun 2020 09:58:18: 28000000 INFO @ Tue, 16 Jun 2020 09:58:20: 16000000 INFO @ Tue, 16 Jun 2020 09:58:20: 22000000 INFO @ Tue, 16 Jun 2020 09:58:24: 29000000 INFO @ Tue, 16 Jun 2020 09:58:25: 17000000 INFO @ Tue, 16 Jun 2020 09:58:26: 23000000 INFO @ Tue, 16 Jun 2020 09:58:29: 30000000 INFO @ Tue, 16 Jun 2020 09:58:30: 18000000 INFO @ Tue, 16 Jun 2020 09:58:31: 24000000 INFO @ Tue, 16 Jun 2020 09:58:34: 31000000 INFO @ Tue, 16 Jun 2020 09:58:35: 19000000 INFO @ Tue, 16 Jun 2020 09:58:36: 25000000 INFO @ Tue, 16 Jun 2020 09:58:39: 32000000 INFO @ Tue, 16 Jun 2020 09:58:41: 20000000 INFO @ Tue, 16 Jun 2020 09:58:41: 26000000 INFO @ Tue, 16 Jun 2020 09:58:44: 33000000 INFO @ Tue, 16 Jun 2020 09:58:46: 21000000 INFO @ Tue, 16 Jun 2020 09:58:46: 27000000 INFO @ Tue, 16 Jun 2020 09:58:49: 34000000 INFO @ Tue, 16 Jun 2020 09:58:51: 22000000 INFO @ Tue, 16 Jun 2020 09:58:51: 28000000 INFO @ Tue, 16 Jun 2020 09:58:54: 35000000 INFO @ Tue, 16 Jun 2020 09:58:56: 23000000 INFO @ Tue, 16 Jun 2020 09:58:57: 29000000 INFO @ Tue, 16 Jun 2020 09:58:59: 36000000 INFO @ Tue, 16 Jun 2020 09:59:01: 24000000 INFO @ Tue, 16 Jun 2020 09:59:02: 30000000 INFO @ Tue, 16 Jun 2020 09:59:04: 37000000 INFO @ Tue, 16 Jun 2020 09:59:06: 25000000 INFO @ Tue, 16 Jun 2020 09:59:07: 31000000 INFO @ Tue, 16 Jun 2020 09:59:09: 38000000 INFO @ Tue, 16 Jun 2020 09:59:11: 26000000 INFO @ Tue, 16 Jun 2020 09:59:11: 32000000 INFO @ Tue, 16 Jun 2020 09:59:14: 39000000 INFO @ Tue, 16 Jun 2020 09:59:16: 27000000 INFO @ Tue, 16 Jun 2020 09:59:16: 33000000 INFO @ Tue, 16 Jun 2020 09:59:19: 40000000 INFO @ Tue, 16 Jun 2020 09:59:21: 28000000 INFO @ Tue, 16 Jun 2020 09:59:21: 34000000 INFO @ Tue, 16 Jun 2020 09:59:24: 41000000 INFO @ Tue, 16 Jun 2020 09:59:26: 29000000 INFO @ Tue, 16 Jun 2020 09:59:26: 35000000 INFO @ Tue, 16 Jun 2020 09:59:29: 42000000 INFO @ Tue, 16 Jun 2020 09:59:31: 30000000 INFO @ Tue, 16 Jun 2020 09:59:31: 36000000 INFO @ Tue, 16 Jun 2020 09:59:34: 43000000 INFO @ Tue, 16 Jun 2020 09:59:35: 31000000 INFO @ Tue, 16 Jun 2020 09:59:36: 37000000 INFO @ Tue, 16 Jun 2020 09:59:39: 44000000 INFO @ Tue, 16 Jun 2020 09:59:40: 32000000 INFO @ Tue, 16 Jun 2020 09:59:41: 38000000 INFO @ Tue, 16 Jun 2020 09:59:44: 45000000 INFO @ Tue, 16 Jun 2020 09:59:45: 33000000 INFO @ Tue, 16 Jun 2020 09:59:46: 39000000 INFO @ Tue, 16 Jun 2020 09:59:49: 46000000 INFO @ Tue, 16 Jun 2020 09:59:50: 34000000 INFO @ Tue, 16 Jun 2020 09:59:51: 40000000 INFO @ Tue, 16 Jun 2020 09:59:54: 47000000 INFO @ Tue, 16 Jun 2020 09:59:54: 35000000 INFO @ Tue, 16 Jun 2020 09:59:56: 41000000 INFO @ Tue, 16 Jun 2020 09:59:59: 48000000 INFO @ Tue, 16 Jun 2020 09:59:59: 36000000 INFO @ Tue, 16 Jun 2020 10:00:01: 42000000 INFO @ Tue, 16 Jun 2020 10:00:04: 49000000 INFO @ Tue, 16 Jun 2020 10:00:04: 37000000 INFO @ Tue, 16 Jun 2020 10:00:06: 43000000 INFO @ Tue, 16 Jun 2020 10:00:08: 50000000 INFO @ Tue, 16 Jun 2020 10:00:09: 38000000 INFO @ Tue, 16 Jun 2020 10:00:11: 44000000 INFO @ Tue, 16 Jun 2020 10:00:13: 51000000 INFO @ Tue, 16 Jun 2020 10:00:14: 39000000 INFO @ Tue, 16 Jun 2020 10:00:15: 45000000 INFO @ Tue, 16 Jun 2020 10:00:18: 52000000 INFO @ Tue, 16 Jun 2020 10:00:19: 40000000 INFO @ Tue, 16 Jun 2020 10:00:20: 46000000 INFO @ Tue, 16 Jun 2020 10:00:23: 53000000 INFO @ Tue, 16 Jun 2020 10:00:23: 41000000 INFO @ Tue, 16 Jun 2020 10:00:25: 47000000 INFO @ Tue, 16 Jun 2020 10:00:28: 54000000 INFO @ Tue, 16 Jun 2020 10:00:28: 42000000 INFO @ Tue, 16 Jun 2020 10:00:30: 48000000 INFO @ Tue, 16 Jun 2020 10:00:33: 55000000 INFO @ Tue, 16 Jun 2020 10:00:33: 43000000 INFO @ Tue, 16 Jun 2020 10:00:35: 49000000 INFO @ Tue, 16 Jun 2020 10:00:38: 56000000 INFO @ Tue, 16 Jun 2020 10:00:38: 44000000 INFO @ Tue, 16 Jun 2020 10:00:39: 50000000 INFO @ Tue, 16 Jun 2020 10:00:42: 57000000 INFO @ Tue, 16 Jun 2020 10:00:43: 45000000 INFO @ Tue, 16 Jun 2020 10:00:44: 51000000 INFO @ Tue, 16 Jun 2020 10:00:47: 58000000 INFO @ Tue, 16 Jun 2020 10:00:48: 46000000 INFO @ Tue, 16 Jun 2020 10:00:49: 52000000 INFO @ Tue, 16 Jun 2020 10:00:52: 59000000 INFO @ Tue, 16 Jun 2020 10:00:53: 47000000 INFO @ Tue, 16 Jun 2020 10:00:54: 53000000 INFO @ Tue, 16 Jun 2020 10:00:57: 60000000 INFO @ Tue, 16 Jun 2020 10:00:58: 48000000 INFO @ Tue, 16 Jun 2020 10:00:59: 54000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 16 Jun 2020 10:01:01: 61000000 INFO @ Tue, 16 Jun 2020 10:01:02: 49000000 INFO @ Tue, 16 Jun 2020 10:01:04: 55000000 INFO @ Tue, 16 Jun 2020 10:01:06: 62000000 INFO @ Tue, 16 Jun 2020 10:01:07: 50000000 INFO @ Tue, 16 Jun 2020 10:01:09: 56000000 INFO @ Tue, 16 Jun 2020 10:01:11: 63000000 INFO @ Tue, 16 Jun 2020 10:01:12: 51000000 INFO @ Tue, 16 Jun 2020 10:01:13: 57000000 INFO @ Tue, 16 Jun 2020 10:01:15: 64000000 INFO @ Tue, 16 Jun 2020 10:01:17: 52000000 INFO @ Tue, 16 Jun 2020 10:01:18: 58000000 INFO @ Tue, 16 Jun 2020 10:01:20: 65000000 INFO @ Tue, 16 Jun 2020 10:01:22: 53000000 INFO @ Tue, 16 Jun 2020 10:01:23: 59000000 INFO @ Tue, 16 Jun 2020 10:01:25: 66000000 INFO @ Tue, 16 Jun 2020 10:01:27: 54000000 INFO @ Tue, 16 Jun 2020 10:01:27: 60000000 INFO @ Tue, 16 Jun 2020 10:01:30: #1 tag size is determined as 25 bps INFO @ Tue, 16 Jun 2020 10:01:30: #1 tag size = 25 INFO @ Tue, 16 Jun 2020 10:01:30: #1 total tags in treatment: 30268248 INFO @ Tue, 16 Jun 2020 10:01:30: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 10:01:30: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 10:01:30: #1 tags after filtering in treatment: 21257061 INFO @ Tue, 16 Jun 2020 10:01:30: #1 Redundant rate of treatment: 0.30 INFO @ Tue, 16 Jun 2020 10:01:30: #1 finished! INFO @ Tue, 16 Jun 2020 10:01:30: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 10:01:30: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 10:01:32: #2 number of paired peaks: 176 WARNING @ Tue, 16 Jun 2020 10:01:32: Fewer paired peaks (176) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 176 pairs to build model! INFO @ Tue, 16 Jun 2020 10:01:32: start model_add_line... INFO @ Tue, 16 Jun 2020 10:01:32: start X-correlation... INFO @ Tue, 16 Jun 2020 10:01:32: end of X-cor INFO @ Tue, 16 Jun 2020 10:01:32: #2 finished! INFO @ Tue, 16 Jun 2020 10:01:32: #2 predicted fragment length is 2 bps INFO @ Tue, 16 Jun 2020 10:01:32: #2 alternative fragment length(s) may be 2,29,69,73,89,108,143,189,263,535,562,596 bps INFO @ Tue, 16 Jun 2020 10:01:32: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX246027/SRX246027.05_model.r INFO @ Tue, 16 Jun 2020 10:01:32: 55000000 WARNING @ Tue, 16 Jun 2020 10:01:32: #2 Since the d (2) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 16 Jun 2020 10:01:32: #2 You may need to consider one of the other alternative d(s): 2,29,69,73,89,108,143,189,263,535,562,596 WARNING @ Tue, 16 Jun 2020 10:01:32: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 16 Jun 2020 10:01:32: #3 Call peaks... INFO @ Tue, 16 Jun 2020 10:01:32: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 16 Jun 2020 10:01:32: 61000000 INFO @ Tue, 16 Jun 2020 10:01:37: 56000000 INFO @ Tue, 16 Jun 2020 10:01:37: 62000000 INFO @ Tue, 16 Jun 2020 10:01:41: 57000000 INFO @ Tue, 16 Jun 2020 10:01:42: 63000000 INFO @ Tue, 16 Jun 2020 10:01:46: 64000000 INFO @ Tue, 16 Jun 2020 10:01:46: 58000000 INFO @ Tue, 16 Jun 2020 10:01:51: 65000000 INFO @ Tue, 16 Jun 2020 10:01:51: 59000000 INFO @ Tue, 16 Jun 2020 10:01:56: 60000000 INFO @ Tue, 16 Jun 2020 10:01:56: 66000000 INFO @ Tue, 16 Jun 2020 10:02:00: #1 tag size is determined as 25 bps INFO @ Tue, 16 Jun 2020 10:02:00: #1 tag size = 25 INFO @ Tue, 16 Jun 2020 10:02:00: #1 total tags in treatment: 30268248 INFO @ Tue, 16 Jun 2020 10:02:00: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 10:02:00: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 10:02:00: 61000000 INFO @ Tue, 16 Jun 2020 10:02:01: #1 tags after filtering in treatment: 21257061 INFO @ Tue, 16 Jun 2020 10:02:01: #1 Redundant rate of treatment: 0.30 INFO @ Tue, 16 Jun 2020 10:02:01: #1 finished! INFO @ Tue, 16 Jun 2020 10:02:01: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 10:02:01: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 10:02:02: #2 number of paired peaks: 176 WARNING @ Tue, 16 Jun 2020 10:02:02: Fewer paired peaks (176) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 176 pairs to build model! INFO @ Tue, 16 Jun 2020 10:02:02: start model_add_line... INFO @ Tue, 16 Jun 2020 10:02:02: start X-correlation... INFO @ Tue, 16 Jun 2020 10:02:02: end of X-cor INFO @ Tue, 16 Jun 2020 10:02:02: #2 finished! INFO @ Tue, 16 Jun 2020 10:02:02: #2 predicted fragment length is 2 bps INFO @ Tue, 16 Jun 2020 10:02:02: #2 alternative fragment length(s) may be 2,29,69,73,89,108,143,189,263,535,562,596 bps INFO @ Tue, 16 Jun 2020 10:02:02: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX246027/SRX246027.10_model.r WARNING @ Tue, 16 Jun 2020 10:02:02: #2 Since the d (2) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 16 Jun 2020 10:02:02: #2 You may need to consider one of the other alternative d(s): 2,29,69,73,89,108,143,189,263,535,562,596 WARNING @ Tue, 16 Jun 2020 10:02:02: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 16 Jun 2020 10:02:02: #3 Call peaks... INFO @ Tue, 16 Jun 2020 10:02:02: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 16 Jun 2020 10:02:05: 62000000 INFO @ Tue, 16 Jun 2020 10:02:06: #3 Call peaks for each chromosome... INFO @ Tue, 16 Jun 2020 10:02:10: 63000000 INFO @ Tue, 16 Jun 2020 10:02:14: 64000000 INFO @ Tue, 16 Jun 2020 10:02:19: 65000000 BigWig に変換しました。 INFO @ Tue, 16 Jun 2020 10:02:22: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX246027/SRX246027.05_peaks.xls INFO @ Tue, 16 Jun 2020 10:02:22: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX246027/SRX246027.05_peaks.narrowPeak INFO @ Tue, 16 Jun 2020 10:02:22: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX246027/SRX246027.05_summits.bed INFO @ Tue, 16 Jun 2020 10:02:22: Done! pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) CompletedMACS2peakCalling INFO @ Tue, 16 Jun 2020 10:02:24: 66000000 INFO @ Tue, 16 Jun 2020 10:02:28: #1 tag size is determined as 25 bps INFO @ Tue, 16 Jun 2020 10:02:28: #1 tag size = 25 INFO @ Tue, 16 Jun 2020 10:02:28: #1 total tags in treatment: 30268248 INFO @ Tue, 16 Jun 2020 10:02:28: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 10:02:28: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 10:02:28: #1 tags after filtering in treatment: 21257061 INFO @ Tue, 16 Jun 2020 10:02:28: #1 Redundant rate of treatment: 0.30 INFO @ Tue, 16 Jun 2020 10:02:28: #1 finished! INFO @ Tue, 16 Jun 2020 10:02:28: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 10:02:28: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 10:02:30: #2 number of paired peaks: 176 WARNING @ Tue, 16 Jun 2020 10:02:30: Fewer paired peaks (176) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 176 pairs to build model! INFO @ Tue, 16 Jun 2020 10:02:30: start model_add_line... INFO @ Tue, 16 Jun 2020 10:02:30: start X-correlation... INFO @ Tue, 16 Jun 2020 10:02:30: end of X-cor INFO @ Tue, 16 Jun 2020 10:02:30: #2 finished! INFO @ Tue, 16 Jun 2020 10:02:30: #2 predicted fragment length is 2 bps INFO @ Tue, 16 Jun 2020 10:02:30: #2 alternative fragment length(s) may be 2,29,69,73,89,108,143,189,263,535,562,596 bps INFO @ Tue, 16 Jun 2020 10:02:30: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX246027/SRX246027.20_model.r WARNING @ Tue, 16 Jun 2020 10:02:30: #2 Since the d (2) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 16 Jun 2020 10:02:30: #2 You may need to consider one of the other alternative d(s): 2,29,69,73,89,108,143,189,263,535,562,596 WARNING @ Tue, 16 Jun 2020 10:02:30: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 16 Jun 2020 10:02:30: #3 Call peaks... INFO @ Tue, 16 Jun 2020 10:02:30: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 16 Jun 2020 10:02:36: #3 Call peaks for each chromosome... INFO @ Tue, 16 Jun 2020 10:02:53: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX246027/SRX246027.10_peaks.xls INFO @ Tue, 16 Jun 2020 10:02:53: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX246027/SRX246027.10_peaks.narrowPeak INFO @ Tue, 16 Jun 2020 10:02:53: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX246027/SRX246027.10_summits.bed INFO @ Tue, 16 Jun 2020 10:02:53: Done! pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) CompletedMACS2peakCalling INFO @ Tue, 16 Jun 2020 10:03:04: #3 Call peaks for each chromosome... INFO @ Tue, 16 Jun 2020 10:03:20: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX246027/SRX246027.20_peaks.xls INFO @ Tue, 16 Jun 2020 10:03:20: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX246027/SRX246027.20_peaks.narrowPeak INFO @ Tue, 16 Jun 2020 10:03:20: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX246027/SRX246027.20_summits.bed INFO @ Tue, 16 Jun 2020 10:03:20: Done! pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) CompletedMACS2peakCalling