Job ID = 14160239 SRX = SRX10144729 Genome = ce11 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:38:59 69225522 reads; of these: 69225522 (100.00%) were paired; of these: 15704317 (22.69%) aligned concordantly 0 times 45798239 (66.16%) aligned concordantly exactly 1 time 7722966 (11.16%) aligned concordantly >1 times ---- 15704317 pairs aligned concordantly 0 times; of these: 2556287 (16.28%) aligned discordantly 1 time ---- 13148030 pairs aligned 0 times concordantly or discordantly; of these: 26296060 mates make up the pairs; of these: 24774343 (94.21%) aligned 0 times 713639 (2.71%) aligned exactly 1 time 808078 (3.07%) aligned >1 times 82.11% overall alignment rate Time searching: 00:38:59 Overall time: 00:38:59 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 44 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 14269073 / 55794725 = 0.2557 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Thu, 09 Dec 2021 02:02:50: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX10144729/SRX10144729.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX10144729/SRX10144729.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX10144729/SRX10144729.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX10144729/SRX10144729.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Thu, 09 Dec 2021 02:02:50: #1 read tag files... INFO @ Thu, 09 Dec 2021 02:02:50: #1 read treatment tags... INFO @ Thu, 09 Dec 2021 02:02:54: 1000000 INFO @ Thu, 09 Dec 2021 02:02:58: 2000000 INFO @ Thu, 09 Dec 2021 02:03:02: 3000000 INFO @ Thu, 09 Dec 2021 02:03:06: 4000000 INFO @ Thu, 09 Dec 2021 02:03:10: 5000000 INFO @ Thu, 09 Dec 2021 02:03:15: 6000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Thu, 09 Dec 2021 02:03:19: 7000000 INFO @ Thu, 09 Dec 2021 02:03:20: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX10144729/SRX10144729.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX10144729/SRX10144729.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX10144729/SRX10144729.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX10144729/SRX10144729.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Thu, 09 Dec 2021 02:03:20: #1 read tag files... INFO @ Thu, 09 Dec 2021 02:03:20: #1 read treatment tags... INFO @ Thu, 09 Dec 2021 02:03:23: 8000000 INFO @ Thu, 09 Dec 2021 02:03:24: 1000000 INFO @ Thu, 09 Dec 2021 02:03:27: 9000000 INFO @ Thu, 09 Dec 2021 02:03:28: 2000000 INFO @ Thu, 09 Dec 2021 02:03:31: 10000000 INFO @ Thu, 09 Dec 2021 02:03:33: 3000000 INFO @ Thu, 09 Dec 2021 02:03:36: 11000000 INFO @ Thu, 09 Dec 2021 02:03:37: 4000000 INFO @ Thu, 09 Dec 2021 02:03:40: 12000000 INFO @ Thu, 09 Dec 2021 02:03:41: 5000000 INFO @ Thu, 09 Dec 2021 02:03:44: 13000000 INFO @ Thu, 09 Dec 2021 02:03:45: 6000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Thu, 09 Dec 2021 02:03:48: 14000000 INFO @ Thu, 09 Dec 2021 02:03:50: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX10144729/SRX10144729.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX10144729/SRX10144729.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX10144729/SRX10144729.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX10144729/SRX10144729.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Thu, 09 Dec 2021 02:03:50: #1 read tag files... INFO @ Thu, 09 Dec 2021 02:03:50: #1 read treatment tags... INFO @ Thu, 09 Dec 2021 02:03:50: 7000000 INFO @ Thu, 09 Dec 2021 02:03:53: 15000000 INFO @ Thu, 09 Dec 2021 02:03:54: 8000000 INFO @ Thu, 09 Dec 2021 02:03:55: 1000000 INFO @ Thu, 09 Dec 2021 02:03:57: 16000000 INFO @ Thu, 09 Dec 2021 02:03:59: 9000000 INFO @ Thu, 09 Dec 2021 02:04:00: 2000000 INFO @ Thu, 09 Dec 2021 02:04:02: 17000000 INFO @ Thu, 09 Dec 2021 02:04:03: 10000000 INFO @ Thu, 09 Dec 2021 02:04:06: 3000000 INFO @ Thu, 09 Dec 2021 02:04:06: 18000000 INFO @ Thu, 09 Dec 2021 02:04:08: 11000000 INFO @ Thu, 09 Dec 2021 02:04:11: 19000000 INFO @ Thu, 09 Dec 2021 02:04:11: 4000000 INFO @ Thu, 09 Dec 2021 02:04:12: 12000000 INFO @ Thu, 09 Dec 2021 02:04:15: 20000000 INFO @ Thu, 09 Dec 2021 02:04:16: 13000000 INFO @ Thu, 09 Dec 2021 02:04:17: 5000000 INFO @ Thu, 09 Dec 2021 02:04:20: 21000000 INFO @ Thu, 09 Dec 2021 02:04:21: 14000000 INFO @ Thu, 09 Dec 2021 02:04:22: 6000000 INFO @ Thu, 09 Dec 2021 02:04:24: 22000000 INFO @ Thu, 09 Dec 2021 02:04:25: 15000000 INFO @ Thu, 09 Dec 2021 02:04:27: 7000000 INFO @ Thu, 09 Dec 2021 02:04:29: 23000000 INFO @ Thu, 09 Dec 2021 02:04:30: 16000000 INFO @ Thu, 09 Dec 2021 02:04:33: 8000000 INFO @ Thu, 09 Dec 2021 02:04:33: 24000000 INFO @ Thu, 09 Dec 2021 02:04:34: 17000000 INFO @ Thu, 09 Dec 2021 02:04:38: 25000000 INFO @ Thu, 09 Dec 2021 02:04:38: 9000000 INFO @ Thu, 09 Dec 2021 02:04:39: 18000000 INFO @ Thu, 09 Dec 2021 02:04:42: 26000000 INFO @ Thu, 09 Dec 2021 02:04:43: 10000000 INFO @ Thu, 09 Dec 2021 02:04:43: 19000000 INFO @ Thu, 09 Dec 2021 02:04:46: 27000000 INFO @ Thu, 09 Dec 2021 02:04:48: 20000000 INFO @ Thu, 09 Dec 2021 02:04:48: 11000000 INFO @ Thu, 09 Dec 2021 02:04:51: 28000000 INFO @ Thu, 09 Dec 2021 02:04:52: 21000000 INFO @ Thu, 09 Dec 2021 02:04:53: 12000000 INFO @ Thu, 09 Dec 2021 02:04:55: 29000000 INFO @ Thu, 09 Dec 2021 02:04:57: 22000000 INFO @ Thu, 09 Dec 2021 02:04:58: 13000000 INFO @ Thu, 09 Dec 2021 02:05:00: 30000000 INFO @ Thu, 09 Dec 2021 02:05:01: 23000000 INFO @ Thu, 09 Dec 2021 02:05:04: 14000000 INFO @ Thu, 09 Dec 2021 02:05:04: 31000000 INFO @ Thu, 09 Dec 2021 02:05:05: 24000000 INFO @ Thu, 09 Dec 2021 02:05:09: 32000000 INFO @ Thu, 09 Dec 2021 02:05:09: 15000000 INFO @ Thu, 09 Dec 2021 02:05:10: 25000000 INFO @ Thu, 09 Dec 2021 02:05:13: 33000000 INFO @ Thu, 09 Dec 2021 02:05:14: 16000000 INFO @ Thu, 09 Dec 2021 02:05:14: 26000000 INFO @ Thu, 09 Dec 2021 02:05:18: 34000000 INFO @ Thu, 09 Dec 2021 02:05:19: 27000000 INFO @ Thu, 09 Dec 2021 02:05:19: 17000000 INFO @ Thu, 09 Dec 2021 02:05:22: 35000000 INFO @ Thu, 09 Dec 2021 02:05:23: 28000000 INFO @ Thu, 09 Dec 2021 02:05:24: 18000000 INFO @ Thu, 09 Dec 2021 02:05:27: 36000000 INFO @ Thu, 09 Dec 2021 02:05:28: 29000000 INFO @ Thu, 09 Dec 2021 02:05:30: 19000000 INFO @ Thu, 09 Dec 2021 02:05:31: 37000000 INFO @ Thu, 09 Dec 2021 02:05:32: 30000000 INFO @ Thu, 09 Dec 2021 02:05:35: 20000000 INFO @ Thu, 09 Dec 2021 02:05:36: 38000000 INFO @ Thu, 09 Dec 2021 02:05:37: 31000000 INFO @ Thu, 09 Dec 2021 02:05:40: 39000000 INFO @ Thu, 09 Dec 2021 02:05:40: 21000000 INFO @ Thu, 09 Dec 2021 02:05:41: 32000000 INFO @ Thu, 09 Dec 2021 02:05:45: 40000000 INFO @ Thu, 09 Dec 2021 02:05:46: 33000000 INFO @ Thu, 09 Dec 2021 02:05:46: 22000000 INFO @ Thu, 09 Dec 2021 02:05:49: 41000000 INFO @ Thu, 09 Dec 2021 02:05:50: 34000000 INFO @ Thu, 09 Dec 2021 02:05:51: 23000000 INFO @ Thu, 09 Dec 2021 02:05:53: 42000000 INFO @ Thu, 09 Dec 2021 02:05:55: 35000000 INFO @ Thu, 09 Dec 2021 02:05:56: 24000000 INFO @ Thu, 09 Dec 2021 02:05:58: 43000000 INFO @ Thu, 09 Dec 2021 02:05:59: 36000000 INFO @ Thu, 09 Dec 2021 02:06:02: 25000000 INFO @ Thu, 09 Dec 2021 02:06:03: 44000000 INFO @ Thu, 09 Dec 2021 02:06:03: 37000000 INFO @ Thu, 09 Dec 2021 02:06:07: 45000000 INFO @ Thu, 09 Dec 2021 02:06:07: 26000000 INFO @ Thu, 09 Dec 2021 02:06:08: 38000000 INFO @ Thu, 09 Dec 2021 02:06:11: 46000000 INFO @ Thu, 09 Dec 2021 02:06:12: 39000000 INFO @ Thu, 09 Dec 2021 02:06:13: 27000000 INFO @ Thu, 09 Dec 2021 02:06:16: 47000000 INFO @ Thu, 09 Dec 2021 02:06:17: 40000000 INFO @ Thu, 09 Dec 2021 02:06:18: 28000000 INFO @ Thu, 09 Dec 2021 02:06:20: 48000000 INFO @ Thu, 09 Dec 2021 02:06:21: 41000000 INFO @ Thu, 09 Dec 2021 02:06:23: 29000000 INFO @ Thu, 09 Dec 2021 02:06:25: 49000000 INFO @ Thu, 09 Dec 2021 02:06:26: 42000000 INFO @ Thu, 09 Dec 2021 02:06:29: 30000000 INFO @ Thu, 09 Dec 2021 02:06:29: 50000000 INFO @ Thu, 09 Dec 2021 02:06:30: 43000000 INFO @ Thu, 09 Dec 2021 02:06:33: 51000000 INFO @ Thu, 09 Dec 2021 02:06:34: 31000000 INFO @ Thu, 09 Dec 2021 02:06:34: 44000000 INFO @ Thu, 09 Dec 2021 02:06:38: 52000000 INFO @ Thu, 09 Dec 2021 02:06:39: 45000000 INFO @ Thu, 09 Dec 2021 02:06:40: 32000000 INFO @ Thu, 09 Dec 2021 02:06:42: 53000000 INFO @ Thu, 09 Dec 2021 02:06:43: 46000000 INFO @ Thu, 09 Dec 2021 02:06:45: 33000000 INFO @ Thu, 09 Dec 2021 02:06:47: 54000000 INFO @ Thu, 09 Dec 2021 02:06:48: 47000000 INFO @ Thu, 09 Dec 2021 02:06:50: 34000000 INFO @ Thu, 09 Dec 2021 02:06:51: 55000000 INFO @ Thu, 09 Dec 2021 02:06:52: 48000000 INFO @ Thu, 09 Dec 2021 02:06:55: 56000000 INFO @ Thu, 09 Dec 2021 02:06:56: 35000000 INFO @ Thu, 09 Dec 2021 02:06:56: 49000000 INFO @ Thu, 09 Dec 2021 02:07:00: 57000000 INFO @ Thu, 09 Dec 2021 02:07:01: 50000000 INFO @ Thu, 09 Dec 2021 02:07:01: 36000000 INFO @ Thu, 09 Dec 2021 02:07:04: 58000000 INFO @ Thu, 09 Dec 2021 02:07:05: 51000000 INFO @ Thu, 09 Dec 2021 02:07:07: 37000000 INFO @ Thu, 09 Dec 2021 02:07:09: 59000000 INFO @ Thu, 09 Dec 2021 02:07:10: 52000000 INFO @ Thu, 09 Dec 2021 02:07:12: 38000000 INFO @ Thu, 09 Dec 2021 02:07:13: 60000000 INFO @ Thu, 09 Dec 2021 02:07:14: 53000000 INFO @ Thu, 09 Dec 2021 02:07:17: 61000000 INFO @ Thu, 09 Dec 2021 02:07:17: 39000000 INFO @ Thu, 09 Dec 2021 02:07:18: 54000000 INFO @ Thu, 09 Dec 2021 02:07:22: 62000000 INFO @ Thu, 09 Dec 2021 02:07:23: 40000000 INFO @ Thu, 09 Dec 2021 02:07:23: 55000000 INFO @ Thu, 09 Dec 2021 02:07:26: 63000000 INFO @ Thu, 09 Dec 2021 02:07:27: 56000000 INFO @ Thu, 09 Dec 2021 02:07:28: 41000000 INFO @ Thu, 09 Dec 2021 02:07:30: 64000000 INFO @ Thu, 09 Dec 2021 02:07:32: 57000000 INFO @ Thu, 09 Dec 2021 02:07:33: 42000000 INFO @ Thu, 09 Dec 2021 02:07:35: 65000000 INFO @ Thu, 09 Dec 2021 02:07:36: 58000000 INFO @ Thu, 09 Dec 2021 02:07:39: 43000000 INFO @ Thu, 09 Dec 2021 02:07:39: 66000000 INFO @ Thu, 09 Dec 2021 02:07:40: 59000000 INFO @ Thu, 09 Dec 2021 02:07:44: 67000000 INFO @ Thu, 09 Dec 2021 02:07:44: 44000000 INFO @ Thu, 09 Dec 2021 02:07:45: 60000000 INFO @ Thu, 09 Dec 2021 02:07:48: 68000000 INFO @ Thu, 09 Dec 2021 02:07:49: 45000000 INFO @ Thu, 09 Dec 2021 02:07:49: 61000000 INFO @ Thu, 09 Dec 2021 02:07:53: 69000000 INFO @ Thu, 09 Dec 2021 02:07:53: 62000000 INFO @ Thu, 09 Dec 2021 02:07:54: 46000000 INFO @ Thu, 09 Dec 2021 02:07:57: 70000000 INFO @ Thu, 09 Dec 2021 02:07:58: 63000000 INFO @ Thu, 09 Dec 2021 02:07:59: 47000000 INFO @ Thu, 09 Dec 2021 02:08:01: 71000000 INFO @ Thu, 09 Dec 2021 02:08:02: 64000000 INFO @ Thu, 09 Dec 2021 02:08:04: 48000000 INFO @ Thu, 09 Dec 2021 02:08:06: 72000000 INFO @ Thu, 09 Dec 2021 02:08:07: 65000000 INFO @ Thu, 09 Dec 2021 02:08:09: 49000000 INFO @ Thu, 09 Dec 2021 02:08:10: 73000000 INFO @ Thu, 09 Dec 2021 02:08:11: 66000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Thu, 09 Dec 2021 02:08:14: 50000000 INFO @ Thu, 09 Dec 2021 02:08:15: 74000000 INFO @ Thu, 09 Dec 2021 02:08:15: 67000000 INFO @ Thu, 09 Dec 2021 02:08:19: 75000000 INFO @ Thu, 09 Dec 2021 02:08:20: 51000000 INFO @ Thu, 09 Dec 2021 02:08:20: 68000000 INFO @ Thu, 09 Dec 2021 02:08:23: 76000000 INFO @ Thu, 09 Dec 2021 02:08:24: 69000000 INFO @ Thu, 09 Dec 2021 02:08:25: 52000000 INFO @ Thu, 09 Dec 2021 02:08:28: 77000000 INFO @ Thu, 09 Dec 2021 02:08:29: 70000000 INFO @ Thu, 09 Dec 2021 02:08:30: 53000000 INFO @ Thu, 09 Dec 2021 02:08:32: 78000000 INFO @ Thu, 09 Dec 2021 02:08:33: 71000000 INFO @ Thu, 09 Dec 2021 02:08:35: 54000000 INFO @ Thu, 09 Dec 2021 02:08:37: 79000000 INFO @ Thu, 09 Dec 2021 02:08:38: 72000000 INFO @ Thu, 09 Dec 2021 02:08:40: 55000000 INFO @ Thu, 09 Dec 2021 02:08:41: 80000000 INFO @ Thu, 09 Dec 2021 02:08:42: 73000000 INFO @ Thu, 09 Dec 2021 02:08:45: 56000000 INFO @ Thu, 09 Dec 2021 02:08:45: 81000000 INFO @ Thu, 09 Dec 2021 02:08:46: 74000000 INFO @ Thu, 09 Dec 2021 02:08:50: 82000000 INFO @ Thu, 09 Dec 2021 02:08:50: 57000000 INFO @ Thu, 09 Dec 2021 02:08:51: 75000000 INFO @ Thu, 09 Dec 2021 02:08:54: 83000000 INFO @ Thu, 09 Dec 2021 02:08:55: 76000000 INFO @ Thu, 09 Dec 2021 02:08:55: 58000000 INFO @ Thu, 09 Dec 2021 02:08:59: 84000000 INFO @ Thu, 09 Dec 2021 02:08:59: 77000000 INFO @ Thu, 09 Dec 2021 02:09:00: 59000000 INFO @ Thu, 09 Dec 2021 02:09:03: 85000000 INFO @ Thu, 09 Dec 2021 02:09:04: #1 tag size is determined as 42 bps INFO @ Thu, 09 Dec 2021 02:09:04: #1 tag size = 42 INFO @ Thu, 09 Dec 2021 02:09:04: #1 total tags in treatment: 39577732 INFO @ Thu, 09 Dec 2021 02:09:04: #1 user defined the maximum tags... INFO @ Thu, 09 Dec 2021 02:09:04: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Thu, 09 Dec 2021 02:09:04: 78000000 INFO @ Thu, 09 Dec 2021 02:09:05: #1 tags after filtering in treatment: 24620907 INFO @ Thu, 09 Dec 2021 02:09:05: #1 Redundant rate of treatment: 0.38 INFO @ Thu, 09 Dec 2021 02:09:05: #1 finished! INFO @ Thu, 09 Dec 2021 02:09:05: #2 Build Peak Model... INFO @ Thu, 09 Dec 2021 02:09:05: #2 looking for paired plus/minus strand peaks... INFO @ Thu, 09 Dec 2021 02:09:05: 60000000 INFO @ Thu, 09 Dec 2021 02:09:06: #2 number of paired peaks: 42 WARNING @ Thu, 09 Dec 2021 02:09:06: Too few paired peaks (42) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Thu, 09 Dec 2021 02:09:06: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce11/SRX10144729/SRX10144729.05_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 0 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX10144729/SRX10144729.05_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX10144729/SRX10144729.05_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX10144729/SRX10144729.05_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Thu, 09 Dec 2021 02:09:08: 79000000 INFO @ Thu, 09 Dec 2021 02:09:10: 61000000 INFO @ Thu, 09 Dec 2021 02:09:13: 80000000 INFO @ Thu, 09 Dec 2021 02:09:15: 62000000 INFO @ Thu, 09 Dec 2021 02:09:17: 81000000 INFO @ Thu, 09 Dec 2021 02:09:21: 63000000 INFO @ Thu, 09 Dec 2021 02:09:21: 82000000 INFO @ Thu, 09 Dec 2021 02:09:26: 83000000 INFO @ Thu, 09 Dec 2021 02:09:26: 64000000 BigWig に変換しました。 INFO @ Thu, 09 Dec 2021 02:09:30: 84000000 INFO @ Thu, 09 Dec 2021 02:09:31: 65000000 INFO @ Thu, 09 Dec 2021 02:09:34: 85000000 INFO @ Thu, 09 Dec 2021 02:09:35: #1 tag size is determined as 42 bps INFO @ Thu, 09 Dec 2021 02:09:35: #1 tag size = 42 INFO @ Thu, 09 Dec 2021 02:09:35: #1 total tags in treatment: 39577732 INFO @ Thu, 09 Dec 2021 02:09:35: #1 user defined the maximum tags... INFO @ Thu, 09 Dec 2021 02:09:35: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Thu, 09 Dec 2021 02:09:36: 66000000 INFO @ Thu, 09 Dec 2021 02:09:36: #1 tags after filtering in treatment: 24620907 INFO @ Thu, 09 Dec 2021 02:09:36: #1 Redundant rate of treatment: 0.38 INFO @ Thu, 09 Dec 2021 02:09:36: #1 finished! INFO @ Thu, 09 Dec 2021 02:09:36: #2 Build Peak Model... INFO @ Thu, 09 Dec 2021 02:09:36: #2 looking for paired plus/minus strand peaks... INFO @ Thu, 09 Dec 2021 02:09:37: #2 number of paired peaks: 42 WARNING @ Thu, 09 Dec 2021 02:09:37: Too few paired peaks (42) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Thu, 09 Dec 2021 02:09:37: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce11/SRX10144729/SRX10144729.10_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX10144729/SRX10144729.10_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX10144729/SRX10144729.10_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX10144729/SRX10144729.10_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Thu, 09 Dec 2021 02:09:41: 67000000 INFO @ Thu, 09 Dec 2021 02:09:46: 68000000 INFO @ Thu, 09 Dec 2021 02:09:50: 69000000 INFO @ Thu, 09 Dec 2021 02:09:55: 70000000 INFO @ Thu, 09 Dec 2021 02:10:00: 71000000 INFO @ Thu, 09 Dec 2021 02:10:05: 72000000 INFO @ Thu, 09 Dec 2021 02:10:10: 73000000 INFO @ Thu, 09 Dec 2021 02:10:15: 74000000 INFO @ Thu, 09 Dec 2021 02:10:20: 75000000 INFO @ Thu, 09 Dec 2021 02:10:25: 76000000 INFO @ Thu, 09 Dec 2021 02:10:29: 77000000 INFO @ Thu, 09 Dec 2021 02:10:34: 78000000 INFO @ Thu, 09 Dec 2021 02:10:39: 79000000 INFO @ Thu, 09 Dec 2021 02:10:44: 80000000 INFO @ Thu, 09 Dec 2021 02:10:49: 81000000 INFO @ Thu, 09 Dec 2021 02:10:54: 82000000 INFO @ Thu, 09 Dec 2021 02:10:59: 83000000 INFO @ Thu, 09 Dec 2021 02:11:03: 84000000 INFO @ Thu, 09 Dec 2021 02:11:08: 85000000 INFO @ Thu, 09 Dec 2021 02:11:09: #1 tag size is determined as 42 bps INFO @ Thu, 09 Dec 2021 02:11:09: #1 tag size = 42 INFO @ Thu, 09 Dec 2021 02:11:09: #1 total tags in treatment: 39577732 INFO @ Thu, 09 Dec 2021 02:11:09: #1 user defined the maximum tags... INFO @ Thu, 09 Dec 2021 02:11:09: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Thu, 09 Dec 2021 02:11:10: #1 tags after filtering in treatment: 24620907 INFO @ Thu, 09 Dec 2021 02:11:10: #1 Redundant rate of treatment: 0.38 INFO @ Thu, 09 Dec 2021 02:11:10: #1 finished! INFO @ Thu, 09 Dec 2021 02:11:10: #2 Build Peak Model... INFO @ Thu, 09 Dec 2021 02:11:10: #2 looking for paired plus/minus strand peaks... INFO @ Thu, 09 Dec 2021 02:11:11: #2 number of paired peaks: 42 WARNING @ Thu, 09 Dec 2021 02:11:11: Too few paired peaks (42) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Thu, 09 Dec 2021 02:11:11: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce11/SRX10144729/SRX10144729.20_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 0 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX10144729/SRX10144729.20_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX10144729/SRX10144729.20_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX10144729/SRX10144729.20_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling