Job ID = 14157903 SRX = SRX8948256 Genome = ce10 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 44350664 spots for SRR12453808/SRR12453808.sra Written 44350664 spots for SRR12453808/SRR12453808.sra fastq に変換しました。 bowtie でマッピング中... Your job 14158189 ("srTce11") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:40:40 44350664 reads; of these: 44350664 (100.00%) were paired; of these: 10699014 (24.12%) aligned concordantly 0 times 28787631 (64.91%) aligned concordantly exactly 1 time 4864019 (10.97%) aligned concordantly >1 times ---- 10699014 pairs aligned concordantly 0 times; of these: 92608 (0.87%) aligned discordantly 1 time ---- 10606406 pairs aligned 0 times concordantly or discordantly; of these: 21212812 mates make up the pairs; of these: 20923527 (98.64%) aligned 0 times 191970 (0.90%) aligned exactly 1 time 97315 (0.46%) aligned >1 times 76.41% overall alignment rate Time searching: 00:40:40 Overall time: 00:40:40 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 28 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 10680137 / 33139749 = 0.3223 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Wed, 08 Dec 2021 13:29:25: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX8948256/SRX8948256.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX8948256/SRX8948256.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX8948256/SRX8948256.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX8948256/SRX8948256.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Wed, 08 Dec 2021 13:29:25: #1 read tag files... INFO @ Wed, 08 Dec 2021 13:29:25: #1 read treatment tags... INFO @ Wed, 08 Dec 2021 13:29:31: 1000000 INFO @ Wed, 08 Dec 2021 13:29:37: 2000000 INFO @ Wed, 08 Dec 2021 13:29:43: 3000000 INFO @ Wed, 08 Dec 2021 13:29:49: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Wed, 08 Dec 2021 13:29:55: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX8948256/SRX8948256.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX8948256/SRX8948256.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX8948256/SRX8948256.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX8948256/SRX8948256.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Wed, 08 Dec 2021 13:29:55: #1 read tag files... INFO @ Wed, 08 Dec 2021 13:29:55: #1 read treatment tags... INFO @ Wed, 08 Dec 2021 13:29:55: 5000000 INFO @ Wed, 08 Dec 2021 13:30:01: 1000000 INFO @ Wed, 08 Dec 2021 13:30:02: 6000000 INFO @ Wed, 08 Dec 2021 13:30:08: 2000000 INFO @ Wed, 08 Dec 2021 13:30:08: 7000000 INFO @ Wed, 08 Dec 2021 13:30:14: 8000000 INFO @ Wed, 08 Dec 2021 13:30:14: 3000000 INFO @ Wed, 08 Dec 2021 13:30:20: 9000000 INFO @ Wed, 08 Dec 2021 13:30:21: 4000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Wed, 08 Dec 2021 13:30:25: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX8948256/SRX8948256.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX8948256/SRX8948256.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX8948256/SRX8948256.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX8948256/SRX8948256.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Wed, 08 Dec 2021 13:30:25: #1 read tag files... INFO @ Wed, 08 Dec 2021 13:30:25: #1 read treatment tags... INFO @ Wed, 08 Dec 2021 13:30:27: 10000000 INFO @ Wed, 08 Dec 2021 13:30:27: 5000000 INFO @ Wed, 08 Dec 2021 13:30:32: 1000000 INFO @ Wed, 08 Dec 2021 13:30:33: 11000000 INFO @ Wed, 08 Dec 2021 13:30:34: 6000000 INFO @ Wed, 08 Dec 2021 13:30:38: 2000000 INFO @ Wed, 08 Dec 2021 13:30:40: 12000000 INFO @ Wed, 08 Dec 2021 13:30:40: 7000000 INFO @ Wed, 08 Dec 2021 13:30:45: 3000000 INFO @ Wed, 08 Dec 2021 13:30:46: 13000000 INFO @ Wed, 08 Dec 2021 13:30:47: 8000000 INFO @ Wed, 08 Dec 2021 13:30:52: 4000000 INFO @ Wed, 08 Dec 2021 13:30:52: 14000000 INFO @ Wed, 08 Dec 2021 13:30:53: 9000000 INFO @ Wed, 08 Dec 2021 13:30:58: 5000000 INFO @ Wed, 08 Dec 2021 13:30:59: 15000000 INFO @ Wed, 08 Dec 2021 13:31:00: 10000000 INFO @ Wed, 08 Dec 2021 13:31:05: 6000000 INFO @ Wed, 08 Dec 2021 13:31:06: 16000000 INFO @ Wed, 08 Dec 2021 13:31:06: 11000000 INFO @ Wed, 08 Dec 2021 13:31:12: 7000000 INFO @ Wed, 08 Dec 2021 13:31:12: 17000000 INFO @ Wed, 08 Dec 2021 13:31:13: 12000000 INFO @ Wed, 08 Dec 2021 13:31:19: 18000000 INFO @ Wed, 08 Dec 2021 13:31:19: 8000000 INFO @ Wed, 08 Dec 2021 13:31:19: 13000000 INFO @ Wed, 08 Dec 2021 13:31:25: 19000000 INFO @ Wed, 08 Dec 2021 13:31:25: 9000000 INFO @ Wed, 08 Dec 2021 13:31:26: 14000000 INFO @ Wed, 08 Dec 2021 13:31:32: 20000000 INFO @ Wed, 08 Dec 2021 13:31:32: 10000000 INFO @ Wed, 08 Dec 2021 13:31:32: 15000000 INFO @ Wed, 08 Dec 2021 13:31:38: 21000000 INFO @ Wed, 08 Dec 2021 13:31:39: 11000000 INFO @ Wed, 08 Dec 2021 13:31:39: 16000000 INFO @ Wed, 08 Dec 2021 13:31:45: 22000000 INFO @ Wed, 08 Dec 2021 13:31:46: 17000000 INFO @ Wed, 08 Dec 2021 13:31:46: 12000000 INFO @ Wed, 08 Dec 2021 13:31:51: 23000000 INFO @ Wed, 08 Dec 2021 13:31:52: 18000000 INFO @ Wed, 08 Dec 2021 13:31:52: 13000000 INFO @ Wed, 08 Dec 2021 13:31:58: 24000000 INFO @ Wed, 08 Dec 2021 13:31:59: 19000000 INFO @ Wed, 08 Dec 2021 13:31:59: 14000000 INFO @ Wed, 08 Dec 2021 13:32:04: 25000000 INFO @ Wed, 08 Dec 2021 13:32:05: 20000000 INFO @ Wed, 08 Dec 2021 13:32:06: 15000000 INFO @ Wed, 08 Dec 2021 13:32:10: 26000000 INFO @ Wed, 08 Dec 2021 13:32:11: 21000000 INFO @ Wed, 08 Dec 2021 13:32:12: 16000000 INFO @ Wed, 08 Dec 2021 13:32:17: 27000000 INFO @ Wed, 08 Dec 2021 13:32:18: 22000000 INFO @ Wed, 08 Dec 2021 13:32:19: 17000000 INFO @ Wed, 08 Dec 2021 13:32:23: 28000000 INFO @ Wed, 08 Dec 2021 13:32:24: 23000000 INFO @ Wed, 08 Dec 2021 13:32:26: 18000000 INFO @ Wed, 08 Dec 2021 13:32:30: 29000000 INFO @ Wed, 08 Dec 2021 13:32:31: 24000000 INFO @ Wed, 08 Dec 2021 13:32:33: 19000000 INFO @ Wed, 08 Dec 2021 13:32:36: 30000000 INFO @ Wed, 08 Dec 2021 13:32:37: 25000000 INFO @ Wed, 08 Dec 2021 13:32:39: 20000000 INFO @ Wed, 08 Dec 2021 13:32:43: 31000000 INFO @ Wed, 08 Dec 2021 13:32:44: 26000000 INFO @ Wed, 08 Dec 2021 13:32:46: 21000000 INFO @ Wed, 08 Dec 2021 13:32:49: 32000000 INFO @ Wed, 08 Dec 2021 13:32:50: 27000000 INFO @ Wed, 08 Dec 2021 13:32:53: 22000000 INFO @ Wed, 08 Dec 2021 13:32:55: 33000000 INFO @ Wed, 08 Dec 2021 13:32:57: 28000000 INFO @ Wed, 08 Dec 2021 13:32:59: 23000000 INFO @ Wed, 08 Dec 2021 13:33:02: 34000000 INFO @ Wed, 08 Dec 2021 13:33:03: 29000000 INFO @ Wed, 08 Dec 2021 13:33:06: 24000000 INFO @ Wed, 08 Dec 2021 13:33:08: 35000000 INFO @ Wed, 08 Dec 2021 13:33:10: 30000000 INFO @ Wed, 08 Dec 2021 13:33:12: 25000000 INFO @ Wed, 08 Dec 2021 13:33:14: 36000000 INFO @ Wed, 08 Dec 2021 13:33:16: 31000000 INFO @ Wed, 08 Dec 2021 13:33:19: 26000000 INFO @ Wed, 08 Dec 2021 13:33:20: 37000000 INFO @ Wed, 08 Dec 2021 13:33:22: 32000000 INFO @ Wed, 08 Dec 2021 13:33:25: 27000000 INFO @ Wed, 08 Dec 2021 13:33:26: 38000000 INFO @ Wed, 08 Dec 2021 13:33:29: 33000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Wed, 08 Dec 2021 13:33:32: 28000000 INFO @ Wed, 08 Dec 2021 13:33:33: 39000000 INFO @ Wed, 08 Dec 2021 13:33:35: 34000000 INFO @ Wed, 08 Dec 2021 13:33:38: 29000000 INFO @ Wed, 08 Dec 2021 13:33:39: 40000000 INFO @ Wed, 08 Dec 2021 13:33:41: 35000000 INFO @ Wed, 08 Dec 2021 13:33:45: 30000000 INFO @ Wed, 08 Dec 2021 13:33:45: 41000000 INFO @ Wed, 08 Dec 2021 13:33:47: 36000000 INFO @ Wed, 08 Dec 2021 13:33:51: 31000000 INFO @ Wed, 08 Dec 2021 13:33:51: 42000000 INFO @ Wed, 08 Dec 2021 13:33:54: 37000000 INFO @ Wed, 08 Dec 2021 13:33:58: 32000000 INFO @ Wed, 08 Dec 2021 13:33:58: 43000000 INFO @ Wed, 08 Dec 2021 13:34:00: 38000000 INFO @ Wed, 08 Dec 2021 13:34:04: 33000000 INFO @ Wed, 08 Dec 2021 13:34:04: 44000000 INFO @ Wed, 08 Dec 2021 13:34:06: 39000000 INFO @ Wed, 08 Dec 2021 13:34:10: 45000000 INFO @ Wed, 08 Dec 2021 13:34:10: 34000000 INFO @ Wed, 08 Dec 2021 13:34:12: 40000000 INFO @ Wed, 08 Dec 2021 13:34:16: 35000000 INFO @ Wed, 08 Dec 2021 13:34:16: 46000000 INFO @ Wed, 08 Dec 2021 13:34:19: 41000000 INFO @ Wed, 08 Dec 2021 13:34:19: #1 tag size is determined as 75 bps INFO @ Wed, 08 Dec 2021 13:34:19: #1 tag size = 75 INFO @ Wed, 08 Dec 2021 13:34:19: #1 total tags in treatment: 22975564 INFO @ Wed, 08 Dec 2021 13:34:19: #1 user defined the maximum tags... INFO @ Wed, 08 Dec 2021 13:34:19: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Wed, 08 Dec 2021 13:34:19: #1 tags after filtering in treatment: 20612410 INFO @ Wed, 08 Dec 2021 13:34:19: #1 Redundant rate of treatment: 0.10 INFO @ Wed, 08 Dec 2021 13:34:19: #1 finished! INFO @ Wed, 08 Dec 2021 13:34:19: #2 Build Peak Model... INFO @ Wed, 08 Dec 2021 13:34:19: #2 looking for paired plus/minus strand peaks... INFO @ Wed, 08 Dec 2021 13:34:21: #2 number of paired peaks: 257 WARNING @ Wed, 08 Dec 2021 13:34:21: Fewer paired peaks (257) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 257 pairs to build model! INFO @ Wed, 08 Dec 2021 13:34:21: start model_add_line... INFO @ Wed, 08 Dec 2021 13:34:21: start X-correlation... INFO @ Wed, 08 Dec 2021 13:34:21: end of X-cor INFO @ Wed, 08 Dec 2021 13:34:21: #2 finished! INFO @ Wed, 08 Dec 2021 13:34:21: #2 predicted fragment length is 98 bps INFO @ Wed, 08 Dec 2021 13:34:21: #2 alternative fragment length(s) may be 3,98,121 bps INFO @ Wed, 08 Dec 2021 13:34:21: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX8948256/SRX8948256.05_model.r WARNING @ Wed, 08 Dec 2021 13:34:21: #2 Since the d (98) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Wed, 08 Dec 2021 13:34:21: #2 You may need to consider one of the other alternative d(s): 3,98,121 WARNING @ Wed, 08 Dec 2021 13:34:21: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Wed, 08 Dec 2021 13:34:21: #3 Call peaks... INFO @ Wed, 08 Dec 2021 13:34:21: #3 Pre-compute pvalue-qvalue table... INFO @ Wed, 08 Dec 2021 13:34:22: 36000000 INFO @ Wed, 08 Dec 2021 13:34:25: 42000000 INFO @ Wed, 08 Dec 2021 13:34:29: 37000000 INFO @ Wed, 08 Dec 2021 13:34:31: 43000000 INFO @ Wed, 08 Dec 2021 13:34:35: 38000000 INFO @ Wed, 08 Dec 2021 13:34:38: 44000000 BigWig に変換しました。 INFO @ Wed, 08 Dec 2021 13:34:41: 39000000 INFO @ Wed, 08 Dec 2021 13:34:44: 45000000 INFO @ Wed, 08 Dec 2021 13:34:48: 40000000 INFO @ Wed, 08 Dec 2021 13:34:50: 46000000 INFO @ Wed, 08 Dec 2021 13:34:53: #1 tag size is determined as 75 bps INFO @ Wed, 08 Dec 2021 13:34:53: #1 tag size = 75 INFO @ Wed, 08 Dec 2021 13:34:53: #1 total tags in treatment: 22975564 INFO @ Wed, 08 Dec 2021 13:34:53: #1 user defined the maximum tags... INFO @ Wed, 08 Dec 2021 13:34:53: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Wed, 08 Dec 2021 13:34:53: #1 tags after filtering in treatment: 20612410 INFO @ Wed, 08 Dec 2021 13:34:53: #1 Redundant rate of treatment: 0.10 INFO @ Wed, 08 Dec 2021 13:34:53: #1 finished! INFO @ Wed, 08 Dec 2021 13:34:53: #2 Build Peak Model... INFO @ Wed, 08 Dec 2021 13:34:53: #2 looking for paired plus/minus strand peaks... INFO @ Wed, 08 Dec 2021 13:34:54: 41000000 INFO @ Wed, 08 Dec 2021 13:34:54: #2 number of paired peaks: 257 WARNING @ Wed, 08 Dec 2021 13:34:54: Fewer paired peaks (257) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 257 pairs to build model! INFO @ Wed, 08 Dec 2021 13:34:54: start model_add_line... INFO @ Wed, 08 Dec 2021 13:34:55: start X-correlation... INFO @ Wed, 08 Dec 2021 13:34:55: end of X-cor INFO @ Wed, 08 Dec 2021 13:34:55: #2 finished! INFO @ Wed, 08 Dec 2021 13:34:55: #2 predicted fragment length is 98 bps INFO @ Wed, 08 Dec 2021 13:34:55: #2 alternative fragment length(s) may be 3,98,121 bps INFO @ Wed, 08 Dec 2021 13:34:55: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX8948256/SRX8948256.10_model.r WARNING @ Wed, 08 Dec 2021 13:34:55: #2 Since the d (98) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Wed, 08 Dec 2021 13:34:55: #2 You may need to consider one of the other alternative d(s): 3,98,121 WARNING @ Wed, 08 Dec 2021 13:34:55: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Wed, 08 Dec 2021 13:34:55: #3 Call peaks... INFO @ Wed, 08 Dec 2021 13:34:55: #3 Pre-compute pvalue-qvalue table... INFO @ Wed, 08 Dec 2021 13:34:55: #3 Call peaks for each chromosome... INFO @ Wed, 08 Dec 2021 13:35:00: 42000000 INFO @ Wed, 08 Dec 2021 13:35:06: 43000000 INFO @ Wed, 08 Dec 2021 13:35:11: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX8948256/SRX8948256.05_peaks.xls INFO @ Wed, 08 Dec 2021 13:35:11: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX8948256/SRX8948256.05_peaks.narrowPeak INFO @ Wed, 08 Dec 2021 13:35:11: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX8948256/SRX8948256.05_summits.bed INFO @ Wed, 08 Dec 2021 13:35:11: Done! pass1 - making usageList (7 chroms): 0 millis pass2 - checking and writing primary data (624 records, 4 fields): 20 millis CompletedMACS2peakCalling INFO @ Wed, 08 Dec 2021 13:35:12: 44000000 INFO @ Wed, 08 Dec 2021 13:35:18: 45000000 INFO @ Wed, 08 Dec 2021 13:35:24: 46000000 INFO @ Wed, 08 Dec 2021 13:35:27: #1 tag size is determined as 75 bps INFO @ Wed, 08 Dec 2021 13:35:27: #1 tag size = 75 INFO @ Wed, 08 Dec 2021 13:35:27: #1 total tags in treatment: 22975564 INFO @ Wed, 08 Dec 2021 13:35:27: #1 user defined the maximum tags... INFO @ Wed, 08 Dec 2021 13:35:27: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Wed, 08 Dec 2021 13:35:27: #1 tags after filtering in treatment: 20612410 INFO @ Wed, 08 Dec 2021 13:35:27: #1 Redundant rate of treatment: 0.10 INFO @ Wed, 08 Dec 2021 13:35:27: #1 finished! INFO @ Wed, 08 Dec 2021 13:35:27: #2 Build Peak Model... INFO @ Wed, 08 Dec 2021 13:35:27: #2 looking for paired plus/minus strand peaks... INFO @ Wed, 08 Dec 2021 13:35:28: #2 number of paired peaks: 257 WARNING @ Wed, 08 Dec 2021 13:35:28: Fewer paired peaks (257) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 257 pairs to build model! INFO @ Wed, 08 Dec 2021 13:35:28: start model_add_line... INFO @ Wed, 08 Dec 2021 13:35:28: start X-correlation... INFO @ Wed, 08 Dec 2021 13:35:28: end of X-cor INFO @ Wed, 08 Dec 2021 13:35:28: #2 finished! INFO @ Wed, 08 Dec 2021 13:35:28: #2 predicted fragment length is 98 bps INFO @ Wed, 08 Dec 2021 13:35:28: #2 alternative fragment length(s) may be 3,98,121 bps INFO @ Wed, 08 Dec 2021 13:35:28: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX8948256/SRX8948256.20_model.r WARNING @ Wed, 08 Dec 2021 13:35:28: #2 Since the d (98) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Wed, 08 Dec 2021 13:35:28: #2 You may need to consider one of the other alternative d(s): 3,98,121 WARNING @ Wed, 08 Dec 2021 13:35:28: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Wed, 08 Dec 2021 13:35:28: #3 Call peaks... INFO @ Wed, 08 Dec 2021 13:35:28: #3 Pre-compute pvalue-qvalue table... INFO @ Wed, 08 Dec 2021 13:35:29: #3 Call peaks for each chromosome... INFO @ Wed, 08 Dec 2021 13:35:46: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX8948256/SRX8948256.10_peaks.xls INFO @ Wed, 08 Dec 2021 13:35:46: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX8948256/SRX8948256.10_peaks.narrowPeak INFO @ Wed, 08 Dec 2021 13:35:46: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX8948256/SRX8948256.10_summits.bed INFO @ Wed, 08 Dec 2021 13:35:46: Done! pass1 - making usageList (7 chroms): 0 millis pass2 - checking and writing primary data (418 records, 4 fields): 8 millis CompletedMACS2peakCalling INFO @ Wed, 08 Dec 2021 13:36:03: #3 Call peaks for each chromosome... INFO @ Wed, 08 Dec 2021 13:36:19: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX8948256/SRX8948256.20_peaks.xls INFO @ Wed, 08 Dec 2021 13:36:19: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX8948256/SRX8948256.20_peaks.narrowPeak INFO @ Wed, 08 Dec 2021 13:36:19: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX8948256/SRX8948256.20_summits.bed INFO @ Wed, 08 Dec 2021 13:36:19: Done! pass1 - making usageList (6 chroms): 1 millis pass2 - checking and writing primary data (258 records, 4 fields): 113 millis CompletedMACS2peakCalling