Job ID = 14159528 SRX = SRX8845638 Genome = ce10 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 48875734 spots for SRR12345945/SRR12345945.sra Written 48875734 spots for SRR12345945/SRR12345945.sra fastq に変換しました。 bowtie でマッピング中... Your job 14159944 ("srTce11") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:34:44 48875734 reads; of these: 48875734 (100.00%) were paired; of these: 4110481 (8.41%) aligned concordantly 0 times 35809759 (73.27%) aligned concordantly exactly 1 time 8955494 (18.32%) aligned concordantly >1 times ---- 4110481 pairs aligned concordantly 0 times; of these: 949867 (23.11%) aligned discordantly 1 time ---- 3160614 pairs aligned 0 times concordantly or discordantly; of these: 6321228 mates make up the pairs; of these: 5276228 (83.47%) aligned 0 times 432772 (6.85%) aligned exactly 1 time 612228 (9.69%) aligned >1 times 94.60% overall alignment rate Time searching: 00:34:44 Overall time: 00:34:44 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 40 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 24611305 / 45541458 = 0.5404 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Wed, 08 Dec 2021 23:13:46: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX8845638/SRX8845638.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX8845638/SRX8845638.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX8845638/SRX8845638.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX8845638/SRX8845638.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Wed, 08 Dec 2021 23:13:46: #1 read tag files... INFO @ Wed, 08 Dec 2021 23:13:46: #1 read treatment tags... INFO @ Wed, 08 Dec 2021 23:13:51: 1000000 INFO @ Wed, 08 Dec 2021 23:13:56: 2000000 INFO @ Wed, 08 Dec 2021 23:14:01: 3000000 INFO @ Wed, 08 Dec 2021 23:14:06: 4000000 INFO @ Wed, 08 Dec 2021 23:14:12: 5000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Wed, 08 Dec 2021 23:14:16: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX8845638/SRX8845638.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX8845638/SRX8845638.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX8845638/SRX8845638.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX8845638/SRX8845638.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Wed, 08 Dec 2021 23:14:16: #1 read tag files... INFO @ Wed, 08 Dec 2021 23:14:16: #1 read treatment tags... INFO @ Wed, 08 Dec 2021 23:14:17: 6000000 INFO @ Wed, 08 Dec 2021 23:14:23: 7000000 INFO @ Wed, 08 Dec 2021 23:14:23: 1000000 INFO @ Wed, 08 Dec 2021 23:14:30: 8000000 INFO @ Wed, 08 Dec 2021 23:14:31: 2000000 INFO @ Wed, 08 Dec 2021 23:14:36: 9000000 INFO @ Wed, 08 Dec 2021 23:14:38: 3000000 INFO @ Wed, 08 Dec 2021 23:14:43: 10000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Wed, 08 Dec 2021 23:14:46: 4000000 INFO @ Wed, 08 Dec 2021 23:14:46: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX8845638/SRX8845638.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX8845638/SRX8845638.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX8845638/SRX8845638.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX8845638/SRX8845638.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Wed, 08 Dec 2021 23:14:46: #1 read tag files... INFO @ Wed, 08 Dec 2021 23:14:46: #1 read treatment tags... INFO @ Wed, 08 Dec 2021 23:14:49: 11000000 INFO @ Wed, 08 Dec 2021 23:14:53: 1000000 INFO @ Wed, 08 Dec 2021 23:14:53: 5000000 INFO @ Wed, 08 Dec 2021 23:14:56: 12000000 INFO @ Wed, 08 Dec 2021 23:14:59: 2000000 INFO @ Wed, 08 Dec 2021 23:15:01: 6000000 INFO @ Wed, 08 Dec 2021 23:15:03: 13000000 INFO @ Wed, 08 Dec 2021 23:15:06: 3000000 INFO @ Wed, 08 Dec 2021 23:15:08: 7000000 INFO @ Wed, 08 Dec 2021 23:15:10: 14000000 INFO @ Wed, 08 Dec 2021 23:15:13: 4000000 INFO @ Wed, 08 Dec 2021 23:15:16: 8000000 INFO @ Wed, 08 Dec 2021 23:15:16: 15000000 INFO @ Wed, 08 Dec 2021 23:15:20: 5000000 INFO @ Wed, 08 Dec 2021 23:15:23: 9000000 INFO @ Wed, 08 Dec 2021 23:15:23: 16000000 INFO @ Wed, 08 Dec 2021 23:15:27: 6000000 INFO @ Wed, 08 Dec 2021 23:15:30: 17000000 INFO @ Wed, 08 Dec 2021 23:15:30: 10000000 INFO @ Wed, 08 Dec 2021 23:15:33: 7000000 INFO @ Wed, 08 Dec 2021 23:15:37: 18000000 INFO @ Wed, 08 Dec 2021 23:15:38: 11000000 INFO @ Wed, 08 Dec 2021 23:15:40: 8000000 INFO @ Wed, 08 Dec 2021 23:15:43: 19000000 INFO @ Wed, 08 Dec 2021 23:15:46: 12000000 INFO @ Wed, 08 Dec 2021 23:15:47: 9000000 INFO @ Wed, 08 Dec 2021 23:15:50: 20000000 INFO @ Wed, 08 Dec 2021 23:15:53: 13000000 INFO @ Wed, 08 Dec 2021 23:15:53: 10000000 INFO @ Wed, 08 Dec 2021 23:15:57: 21000000 INFO @ Wed, 08 Dec 2021 23:16:00: 11000000 INFO @ Wed, 08 Dec 2021 23:16:00: 14000000 INFO @ Wed, 08 Dec 2021 23:16:04: 22000000 INFO @ Wed, 08 Dec 2021 23:16:07: 12000000 INFO @ Wed, 08 Dec 2021 23:16:08: 15000000 INFO @ Wed, 08 Dec 2021 23:16:10: 23000000 INFO @ Wed, 08 Dec 2021 23:16:14: 13000000 INFO @ Wed, 08 Dec 2021 23:16:15: 16000000 INFO @ Wed, 08 Dec 2021 23:16:17: 24000000 INFO @ Wed, 08 Dec 2021 23:16:21: 14000000 INFO @ Wed, 08 Dec 2021 23:16:23: 17000000 INFO @ Wed, 08 Dec 2021 23:16:24: 25000000 INFO @ Wed, 08 Dec 2021 23:16:27: 15000000 INFO @ Wed, 08 Dec 2021 23:16:30: 18000000 INFO @ Wed, 08 Dec 2021 23:16:31: 26000000 INFO @ Wed, 08 Dec 2021 23:16:34: 16000000 INFO @ Wed, 08 Dec 2021 23:16:38: 19000000 INFO @ Wed, 08 Dec 2021 23:16:38: 27000000 INFO @ Wed, 08 Dec 2021 23:16:41: 17000000 INFO @ Wed, 08 Dec 2021 23:16:44: 28000000 INFO @ Wed, 08 Dec 2021 23:16:45: 20000000 INFO @ Wed, 08 Dec 2021 23:16:48: 18000000 INFO @ Wed, 08 Dec 2021 23:16:51: 29000000 INFO @ Wed, 08 Dec 2021 23:16:53: 21000000 INFO @ Wed, 08 Dec 2021 23:16:54: 19000000 INFO @ Wed, 08 Dec 2021 23:16:58: 30000000 INFO @ Wed, 08 Dec 2021 23:17:00: 22000000 INFO @ Wed, 08 Dec 2021 23:17:01: 20000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Wed, 08 Dec 2021 23:17:05: 31000000 INFO @ Wed, 08 Dec 2021 23:17:08: 23000000 INFO @ Wed, 08 Dec 2021 23:17:08: 21000000 INFO @ Wed, 08 Dec 2021 23:17:12: 32000000 INFO @ Wed, 08 Dec 2021 23:17:15: 22000000 INFO @ Wed, 08 Dec 2021 23:17:15: 24000000 INFO @ Wed, 08 Dec 2021 23:17:19: 33000000 INFO @ Wed, 08 Dec 2021 23:17:22: 23000000 INFO @ Wed, 08 Dec 2021 23:17:23: 25000000 INFO @ Wed, 08 Dec 2021 23:17:25: 34000000 INFO @ Wed, 08 Dec 2021 23:17:28: 24000000 INFO @ Wed, 08 Dec 2021 23:17:30: 26000000 INFO @ Wed, 08 Dec 2021 23:17:32: 35000000 INFO @ Wed, 08 Dec 2021 23:17:35: 25000000 INFO @ Wed, 08 Dec 2021 23:17:38: 27000000 INFO @ Wed, 08 Dec 2021 23:17:39: 36000000 INFO @ Wed, 08 Dec 2021 23:17:42: 26000000 INFO @ Wed, 08 Dec 2021 23:17:45: 28000000 INFO @ Wed, 08 Dec 2021 23:17:46: 37000000 BigWig に変換しました。 INFO @ Wed, 08 Dec 2021 23:17:49: 27000000 INFO @ Wed, 08 Dec 2021 23:17:52: 38000000 INFO @ Wed, 08 Dec 2021 23:17:53: 29000000 INFO @ Wed, 08 Dec 2021 23:17:56: 28000000 INFO @ Wed, 08 Dec 2021 23:17:59: 39000000 INFO @ Wed, 08 Dec 2021 23:18:00: 30000000 INFO @ Wed, 08 Dec 2021 23:18:02: 29000000 INFO @ Wed, 08 Dec 2021 23:18:06: 40000000 INFO @ Wed, 08 Dec 2021 23:18:08: 31000000 INFO @ Wed, 08 Dec 2021 23:18:09: 30000000 INFO @ Wed, 08 Dec 2021 23:18:13: 41000000 INFO @ Wed, 08 Dec 2021 23:18:15: 32000000 INFO @ Wed, 08 Dec 2021 23:18:16: 31000000 INFO @ Wed, 08 Dec 2021 23:18:19: 42000000 INFO @ Wed, 08 Dec 2021 23:18:23: 33000000 INFO @ Wed, 08 Dec 2021 23:18:23: 32000000 INFO @ Wed, 08 Dec 2021 23:18:26: 43000000 INFO @ Wed, 08 Dec 2021 23:18:28: #1 tag size is determined as 50 bps INFO @ Wed, 08 Dec 2021 23:18:28: #1 tag size = 50 INFO @ Wed, 08 Dec 2021 23:18:28: #1 total tags in treatment: 20464798 INFO @ Wed, 08 Dec 2021 23:18:28: #1 user defined the maximum tags... INFO @ Wed, 08 Dec 2021 23:18:28: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Wed, 08 Dec 2021 23:18:28: #1 tags after filtering in treatment: 11523697 INFO @ Wed, 08 Dec 2021 23:18:28: #1 Redundant rate of treatment: 0.44 INFO @ Wed, 08 Dec 2021 23:18:28: #1 finished! INFO @ Wed, 08 Dec 2021 23:18:28: #2 Build Peak Model... INFO @ Wed, 08 Dec 2021 23:18:28: #2 looking for paired plus/minus strand peaks... INFO @ Wed, 08 Dec 2021 23:18:29: #2 number of paired peaks: 1083 INFO @ Wed, 08 Dec 2021 23:18:29: start model_add_line... INFO @ Wed, 08 Dec 2021 23:18:29: start X-correlation... INFO @ Wed, 08 Dec 2021 23:18:29: end of X-cor INFO @ Wed, 08 Dec 2021 23:18:29: #2 finished! INFO @ Wed, 08 Dec 2021 23:18:29: #2 predicted fragment length is 80 bps INFO @ Wed, 08 Dec 2021 23:18:29: #2 alternative fragment length(s) may be 80 bps INFO @ Wed, 08 Dec 2021 23:18:29: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX8845638/SRX8845638.05_model.r WARNING @ Wed, 08 Dec 2021 23:18:29: #2 Since the d (80) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Wed, 08 Dec 2021 23:18:29: #2 You may need to consider one of the other alternative d(s): 80 WARNING @ Wed, 08 Dec 2021 23:18:29: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Wed, 08 Dec 2021 23:18:29: #3 Call peaks... INFO @ Wed, 08 Dec 2021 23:18:29: #3 Pre-compute pvalue-qvalue table... INFO @ Wed, 08 Dec 2021 23:18:29: 33000000 INFO @ Wed, 08 Dec 2021 23:18:30: 34000000 INFO @ Wed, 08 Dec 2021 23:18:36: 34000000 INFO @ Wed, 08 Dec 2021 23:18:38: 35000000 INFO @ Wed, 08 Dec 2021 23:18:42: 35000000 INFO @ Wed, 08 Dec 2021 23:18:45: 36000000 INFO @ Wed, 08 Dec 2021 23:18:49: 36000000 INFO @ Wed, 08 Dec 2021 23:18:51: #3 Call peaks for each chromosome... INFO @ Wed, 08 Dec 2021 23:18:53: 37000000 INFO @ Wed, 08 Dec 2021 23:18:55: 37000000 INFO @ Wed, 08 Dec 2021 23:19:01: 38000000 INFO @ Wed, 08 Dec 2021 23:19:02: 38000000 INFO @ Wed, 08 Dec 2021 23:19:02: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX8845638/SRX8845638.05_peaks.xls INFO @ Wed, 08 Dec 2021 23:19:02: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX8845638/SRX8845638.05_peaks.narrowPeak INFO @ Wed, 08 Dec 2021 23:19:02: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX8845638/SRX8845638.05_summits.bed INFO @ Wed, 08 Dec 2021 23:19:02: Done! pass1 - making usageList (7 chroms): 2 millis pass2 - checking and writing primary data (11971 records, 4 fields): 17 millis CompletedMACS2peakCalling INFO @ Wed, 08 Dec 2021 23:19:09: 39000000 INFO @ Wed, 08 Dec 2021 23:19:09: 39000000 INFO @ Wed, 08 Dec 2021 23:19:17: 40000000 INFO @ Wed, 08 Dec 2021 23:19:17: 40000000 INFO @ Wed, 08 Dec 2021 23:19:23: 41000000 INFO @ Wed, 08 Dec 2021 23:19:25: 41000000 INFO @ Wed, 08 Dec 2021 23:19:29: 42000000 INFO @ Wed, 08 Dec 2021 23:19:33: 42000000 INFO @ Wed, 08 Dec 2021 23:19:36: 43000000 INFO @ Wed, 08 Dec 2021 23:19:37: #1 tag size is determined as 50 bps INFO @ Wed, 08 Dec 2021 23:19:37: #1 tag size = 50 INFO @ Wed, 08 Dec 2021 23:19:37: #1 total tags in treatment: 20464798 INFO @ Wed, 08 Dec 2021 23:19:37: #1 user defined the maximum tags... INFO @ Wed, 08 Dec 2021 23:19:37: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Wed, 08 Dec 2021 23:19:38: #1 tags after filtering in treatment: 11523697 INFO @ Wed, 08 Dec 2021 23:19:38: #1 Redundant rate of treatment: 0.44 INFO @ Wed, 08 Dec 2021 23:19:38: #1 finished! INFO @ Wed, 08 Dec 2021 23:19:38: #2 Build Peak Model... INFO @ Wed, 08 Dec 2021 23:19:38: #2 looking for paired plus/minus strand peaks... INFO @ Wed, 08 Dec 2021 23:19:39: #2 number of paired peaks: 1083 INFO @ Wed, 08 Dec 2021 23:19:39: start model_add_line... INFO @ Wed, 08 Dec 2021 23:19:39: start X-correlation... INFO @ Wed, 08 Dec 2021 23:19:39: end of X-cor INFO @ Wed, 08 Dec 2021 23:19:39: #2 finished! INFO @ Wed, 08 Dec 2021 23:19:39: #2 predicted fragment length is 80 bps INFO @ Wed, 08 Dec 2021 23:19:39: #2 alternative fragment length(s) may be 80 bps INFO @ Wed, 08 Dec 2021 23:19:39: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX8845638/SRX8845638.20_model.r WARNING @ Wed, 08 Dec 2021 23:19:39: #2 Since the d (80) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Wed, 08 Dec 2021 23:19:39: #2 You may need to consider one of the other alternative d(s): 80 WARNING @ Wed, 08 Dec 2021 23:19:39: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Wed, 08 Dec 2021 23:19:39: #3 Call peaks... INFO @ Wed, 08 Dec 2021 23:19:39: #3 Pre-compute pvalue-qvalue table... INFO @ Wed, 08 Dec 2021 23:19:41: 43000000 INFO @ Wed, 08 Dec 2021 23:19:42: #1 tag size is determined as 50 bps INFO @ Wed, 08 Dec 2021 23:19:42: #1 tag size = 50 INFO @ Wed, 08 Dec 2021 23:19:42: #1 total tags in treatment: 20464798 INFO @ Wed, 08 Dec 2021 23:19:42: #1 user defined the maximum tags... INFO @ Wed, 08 Dec 2021 23:19:42: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Wed, 08 Dec 2021 23:19:43: #1 tags after filtering in treatment: 11523697 INFO @ Wed, 08 Dec 2021 23:19:43: #1 Redundant rate of treatment: 0.44 INFO @ Wed, 08 Dec 2021 23:19:43: #1 finished! INFO @ Wed, 08 Dec 2021 23:19:43: #2 Build Peak Model... INFO @ Wed, 08 Dec 2021 23:19:43: #2 looking for paired plus/minus strand peaks... INFO @ Wed, 08 Dec 2021 23:19:44: #2 number of paired peaks: 1083 INFO @ Wed, 08 Dec 2021 23:19:44: start model_add_line... INFO @ Wed, 08 Dec 2021 23:19:44: start X-correlation... INFO @ Wed, 08 Dec 2021 23:19:44: end of X-cor INFO @ Wed, 08 Dec 2021 23:19:44: #2 finished! INFO @ Wed, 08 Dec 2021 23:19:44: #2 predicted fragment length is 80 bps INFO @ Wed, 08 Dec 2021 23:19:44: #2 alternative fragment length(s) may be 80 bps INFO @ Wed, 08 Dec 2021 23:19:44: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX8845638/SRX8845638.10_model.r WARNING @ Wed, 08 Dec 2021 23:19:44: #2 Since the d (80) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Wed, 08 Dec 2021 23:19:44: #2 You may need to consider one of the other alternative d(s): 80 WARNING @ Wed, 08 Dec 2021 23:19:44: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Wed, 08 Dec 2021 23:19:44: #3 Call peaks... INFO @ Wed, 08 Dec 2021 23:19:44: #3 Pre-compute pvalue-qvalue table... INFO @ Wed, 08 Dec 2021 23:20:01: #3 Call peaks for each chromosome... INFO @ Wed, 08 Dec 2021 23:20:08: #3 Call peaks for each chromosome... INFO @ Wed, 08 Dec 2021 23:20:12: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX8845638/SRX8845638.20_peaks.xls INFO @ Wed, 08 Dec 2021 23:20:12: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX8845638/SRX8845638.20_peaks.narrowPeak INFO @ Wed, 08 Dec 2021 23:20:12: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX8845638/SRX8845638.20_summits.bed INFO @ Wed, 08 Dec 2021 23:20:12: Done! pass1 - making usageList (6 chroms): 1 millis pass2 - checking and writing primary data (4472 records, 4 fields): 52 millis CompletedMACS2peakCalling INFO @ Wed, 08 Dec 2021 23:20:21: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX8845638/SRX8845638.10_peaks.xls INFO @ Wed, 08 Dec 2021 23:20:21: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX8845638/SRX8845638.10_peaks.narrowPeak INFO @ Wed, 08 Dec 2021 23:20:21: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX8845638/SRX8845638.10_summits.bed INFO @ Wed, 08 Dec 2021 23:20:21: Done! pass1 - making usageList (6 chroms): 2 millis pass2 - checking and writing primary data (8307 records, 4 fields): 37 millis CompletedMACS2peakCalling