Job ID = 12264826 SRX = SRX7687149 Genome = ce10 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 27642635 spots for SRR11034892/SRR11034892.sra Written 27642635 spots for SRR11034892/SRR11034892.sra fastq に変換しました。 bowtie でマッピング中... Your job 12265508 ("srTce11") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:55:38 27642635 reads; of these: 27642635 (100.00%) were paired; of these: 7368868 (26.66%) aligned concordantly 0 times 15203285 (55.00%) aligned concordantly exactly 1 time 5070482 (18.34%) aligned concordantly >1 times ---- 7368868 pairs aligned concordantly 0 times; of these: 5331880 (72.36%) aligned discordantly 1 time ---- 2036988 pairs aligned 0 times concordantly or discordantly; of these: 4073976 mates make up the pairs; of these: 1845017 (45.29%) aligned 0 times 804258 (19.74%) aligned exactly 1 time 1424701 (34.97%) aligned >1 times 96.66% overall alignment rate Time searching: 00:55:38 Overall time: 00:55:38 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 24 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 4265956 / 25576413 = 0.1668 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 07:09:40: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX7687149/SRX7687149.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX7687149/SRX7687149.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX7687149/SRX7687149.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX7687149/SRX7687149.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 07:09:40: #1 read tag files... INFO @ Sat, 03 Apr 2021 07:09:40: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 07:09:46: 1000000 INFO @ Sat, 03 Apr 2021 07:09:51: 2000000 INFO @ Sat, 03 Apr 2021 07:09:56: 3000000 INFO @ Sat, 03 Apr 2021 07:10:02: 4000000 INFO @ Sat, 03 Apr 2021 07:10:07: 5000000 WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 07:10:10: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX7687149/SRX7687149.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX7687149/SRX7687149.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX7687149/SRX7687149.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX7687149/SRX7687149.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 07:10:10: #1 read tag files... INFO @ Sat, 03 Apr 2021 07:10:10: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 07:10:12: 6000000 INFO @ Sat, 03 Apr 2021 07:10:17: 7000000 INFO @ Sat, 03 Apr 2021 07:10:18: 1000000 INFO @ Sat, 03 Apr 2021 07:10:24: 8000000 INFO @ Sat, 03 Apr 2021 07:10:26: 2000000 INFO @ Sat, 03 Apr 2021 07:10:30: 9000000 INFO @ Sat, 03 Apr 2021 07:10:34: 3000000 INFO @ Sat, 03 Apr 2021 07:10:36: 10000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 07:10:40: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX7687149/SRX7687149.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX7687149/SRX7687149.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX7687149/SRX7687149.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX7687149/SRX7687149.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 07:10:40: #1 read tag files... INFO @ Sat, 03 Apr 2021 07:10:40: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 07:10:42: 11000000 INFO @ Sat, 03 Apr 2021 07:10:42: 4000000 INFO @ Sat, 03 Apr 2021 07:10:47: 1000000 INFO @ Sat, 03 Apr 2021 07:10:48: 12000000 INFO @ Sat, 03 Apr 2021 07:10:50: 5000000 INFO @ Sat, 03 Apr 2021 07:10:54: 2000000 INFO @ Sat, 03 Apr 2021 07:10:55: 13000000 INFO @ Sat, 03 Apr 2021 07:10:59: 6000000 INFO @ Sat, 03 Apr 2021 07:11:00: 3000000 INFO @ Sat, 03 Apr 2021 07:11:01: 14000000 INFO @ Sat, 03 Apr 2021 07:11:07: 4000000 INFO @ Sat, 03 Apr 2021 07:11:07: 7000000 INFO @ Sat, 03 Apr 2021 07:11:08: 15000000 INFO @ Sat, 03 Apr 2021 07:11:13: 5000000 INFO @ Sat, 03 Apr 2021 07:11:14: 16000000 INFO @ Sat, 03 Apr 2021 07:11:15: 8000000 INFO @ Sat, 03 Apr 2021 07:11:20: 6000000 INFO @ Sat, 03 Apr 2021 07:11:20: 17000000 INFO @ Sat, 03 Apr 2021 07:11:23: 9000000 INFO @ Sat, 03 Apr 2021 07:11:26: 7000000 INFO @ Sat, 03 Apr 2021 07:11:27: 18000000 INFO @ Sat, 03 Apr 2021 07:11:30: 10000000 INFO @ Sat, 03 Apr 2021 07:11:33: 8000000 INFO @ Sat, 03 Apr 2021 07:11:34: 19000000 INFO @ Sat, 03 Apr 2021 07:11:38: 11000000 INFO @ Sat, 03 Apr 2021 07:11:39: 9000000 INFO @ Sat, 03 Apr 2021 07:11:40: 20000000 INFO @ Sat, 03 Apr 2021 07:11:45: 12000000 INFO @ Sat, 03 Apr 2021 07:11:46: 10000000 INFO @ Sat, 03 Apr 2021 07:11:46: 21000000 INFO @ Sat, 03 Apr 2021 07:11:52: 11000000 INFO @ Sat, 03 Apr 2021 07:11:53: 13000000 INFO @ Sat, 03 Apr 2021 07:11:53: 22000000 INFO @ Sat, 03 Apr 2021 07:11:58: 12000000 INFO @ Sat, 03 Apr 2021 07:11:59: 23000000 INFO @ Sat, 03 Apr 2021 07:12:00: 14000000 INFO @ Sat, 03 Apr 2021 07:12:05: 13000000 INFO @ Sat, 03 Apr 2021 07:12:06: 24000000 INFO @ Sat, 03 Apr 2021 07:12:07: 15000000 INFO @ Sat, 03 Apr 2021 07:12:11: 14000000 INFO @ Sat, 03 Apr 2021 07:12:12: 25000000 INFO @ Sat, 03 Apr 2021 07:12:15: 16000000 INFO @ Sat, 03 Apr 2021 07:12:18: 15000000 INFO @ Sat, 03 Apr 2021 07:12:18: 26000000 INFO @ Sat, 03 Apr 2021 07:12:22: 17000000 INFO @ Sat, 03 Apr 2021 07:12:24: 16000000 INFO @ Sat, 03 Apr 2021 07:12:25: 27000000 INFO @ Sat, 03 Apr 2021 07:12:29: 18000000 INFO @ Sat, 03 Apr 2021 07:12:31: 17000000 INFO @ Sat, 03 Apr 2021 07:12:31: 28000000 INFO @ Sat, 03 Apr 2021 07:12:36: 19000000 INFO @ Sat, 03 Apr 2021 07:12:37: 18000000 INFO @ Sat, 03 Apr 2021 07:12:38: 29000000 INFO @ Sat, 03 Apr 2021 07:12:43: 20000000 INFO @ Sat, 03 Apr 2021 07:12:43: 19000000 INFO @ Sat, 03 Apr 2021 07:12:45: 30000000 INFO @ Sat, 03 Apr 2021 07:12:49: 20000000 INFO @ Sat, 03 Apr 2021 07:12:50: 21000000 INFO @ Sat, 03 Apr 2021 07:12:51: 31000000 INFO @ Sat, 03 Apr 2021 07:12:56: 21000000 INFO @ Sat, 03 Apr 2021 07:12:56: 22000000 INFO @ Sat, 03 Apr 2021 07:12:58: 32000000 INFO @ Sat, 03 Apr 2021 07:13:02: 22000000 INFO @ Sat, 03 Apr 2021 07:13:03: 23000000 INFO @ Sat, 03 Apr 2021 07:13:04: 33000000 INFO @ Sat, 03 Apr 2021 07:13:08: 23000000 INFO @ Sat, 03 Apr 2021 07:13:10: 24000000 INFO @ Sat, 03 Apr 2021 07:13:11: 34000000 INFO @ Sat, 03 Apr 2021 07:13:14: 24000000 INFO @ Sat, 03 Apr 2021 07:13:17: 25000000 INFO @ Sat, 03 Apr 2021 07:13:20: 25000000 INFO @ Sat, 03 Apr 2021 07:13:20: 35000000 INFO @ Sat, 03 Apr 2021 07:13:23: 26000000 INFO @ Sat, 03 Apr 2021 07:13:26: 26000000 INFO @ Sat, 03 Apr 2021 07:13:27: 36000000 INFO @ Sat, 03 Apr 2021 07:13:29: 27000000 INFO @ Sat, 03 Apr 2021 07:13:32: 27000000 INFO @ Sat, 03 Apr 2021 07:13:34: 37000000 INFO @ Sat, 03 Apr 2021 07:13:35: 28000000 INFO @ Sat, 03 Apr 2021 07:13:39: 28000000 INFO @ Sat, 03 Apr 2021 07:13:40: 38000000 INFO @ Sat, 03 Apr 2021 07:13:42: 29000000 INFO @ Sat, 03 Apr 2021 07:13:45: 29000000 INFO @ Sat, 03 Apr 2021 07:13:47: 39000000 INFO @ Sat, 03 Apr 2021 07:13:48: 30000000 INFO @ Sat, 03 Apr 2021 07:13:52: 30000000 INFO @ Sat, 03 Apr 2021 07:13:53: 40000000 INFO @ Sat, 03 Apr 2021 07:13:54: 31000000 INFO @ Sat, 03 Apr 2021 07:13:58: 31000000 INFO @ Sat, 03 Apr 2021 07:14:00: 41000000 INFO @ Sat, 03 Apr 2021 07:14:00: 32000000 INFO @ Sat, 03 Apr 2021 07:14:04: 32000000 INFO @ Sat, 03 Apr 2021 07:14:06: 33000000 INFO @ Sat, 03 Apr 2021 07:14:06: 42000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sat, 03 Apr 2021 07:14:11: 33000000 INFO @ Sat, 03 Apr 2021 07:14:12: 34000000 INFO @ Sat, 03 Apr 2021 07:14:13: 43000000 INFO @ Sat, 03 Apr 2021 07:14:17: 34000000 INFO @ Sat, 03 Apr 2021 07:14:19: 35000000 INFO @ Sat, 03 Apr 2021 07:14:19: 44000000 INFO @ Sat, 03 Apr 2021 07:14:24: 35000000 INFO @ Sat, 03 Apr 2021 07:14:25: #1 tag size is determined as 75 bps INFO @ Sat, 03 Apr 2021 07:14:25: #1 tag size = 75 INFO @ Sat, 03 Apr 2021 07:14:25: #1 total tags in treatment: 16501390 INFO @ Sat, 03 Apr 2021 07:14:25: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 07:14:25: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 07:14:25: #1 tags after filtering in treatment: 11600165 INFO @ Sat, 03 Apr 2021 07:14:25: #1 Redundant rate of treatment: 0.30 INFO @ Sat, 03 Apr 2021 07:14:25: #1 finished! INFO @ Sat, 03 Apr 2021 07:14:25: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 07:14:25: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 07:14:26: 36000000 INFO @ Sat, 03 Apr 2021 07:14:26: #2 number of paired peaks: 369 WARNING @ Sat, 03 Apr 2021 07:14:26: Fewer paired peaks (369) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 369 pairs to build model! INFO @ Sat, 03 Apr 2021 07:14:26: start model_add_line... INFO @ Sat, 03 Apr 2021 07:14:26: start X-correlation... INFO @ Sat, 03 Apr 2021 07:14:26: end of X-cor INFO @ Sat, 03 Apr 2021 07:14:26: #2 finished! INFO @ Sat, 03 Apr 2021 07:14:26: #2 predicted fragment length is 128 bps INFO @ Sat, 03 Apr 2021 07:14:26: #2 alternative fragment length(s) may be 4,128,134,148,155 bps INFO @ Sat, 03 Apr 2021 07:14:26: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX7687149/SRX7687149.05_model.r WARNING @ Sat, 03 Apr 2021 07:14:26: #2 Since the d (128) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 07:14:26: #2 You may need to consider one of the other alternative d(s): 4,128,134,148,155 WARNING @ Sat, 03 Apr 2021 07:14:26: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 07:14:26: #3 Call peaks... INFO @ Sat, 03 Apr 2021 07:14:26: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 07:14:30: 36000000 INFO @ Sat, 03 Apr 2021 07:14:33: 37000000 INFO @ Sat, 03 Apr 2021 07:14:36: 37000000 INFO @ Sat, 03 Apr 2021 07:14:40: 38000000 INFO @ Sat, 03 Apr 2021 07:14:43: 38000000 INFO @ Sat, 03 Apr 2021 07:14:47: 39000000 INFO @ Sat, 03 Apr 2021 07:14:49: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 07:14:49: 39000000 INFO @ Sat, 03 Apr 2021 07:14:54: 40000000 INFO @ Sat, 03 Apr 2021 07:14:55: 40000000 INFO @ Sat, 03 Apr 2021 07:15:00: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX7687149/SRX7687149.05_peaks.xls INFO @ Sat, 03 Apr 2021 07:15:00: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX7687149/SRX7687149.05_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 07:15:00: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX7687149/SRX7687149.05_summits.bed INFO @ Sat, 03 Apr 2021 07:15:00: Done! pass1 - making usageList (7 chroms): 0 millis pass2 - checking and writing primary data (581 records, 4 fields): 3 millis CompletedMACS2peakCalling INFO @ Sat, 03 Apr 2021 07:15:01: 41000000 INFO @ Sat, 03 Apr 2021 07:15:01: 41000000 INFO @ Sat, 03 Apr 2021 07:15:08: 42000000 INFO @ Sat, 03 Apr 2021 07:15:08: 42000000 INFO @ Sat, 03 Apr 2021 07:15:14: 43000000 INFO @ Sat, 03 Apr 2021 07:15:15: 43000000 INFO @ Sat, 03 Apr 2021 07:15:20: 44000000 BigWig に変換しました。 INFO @ Sat, 03 Apr 2021 07:15:22: 44000000 INFO @ Sat, 03 Apr 2021 07:15:26: #1 tag size is determined as 75 bps INFO @ Sat, 03 Apr 2021 07:15:26: #1 tag size = 75 INFO @ Sat, 03 Apr 2021 07:15:26: #1 total tags in treatment: 16501390 INFO @ Sat, 03 Apr 2021 07:15:26: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 07:15:26: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 07:15:27: #1 tags after filtering in treatment: 11600165 INFO @ Sat, 03 Apr 2021 07:15:27: #1 Redundant rate of treatment: 0.30 INFO @ Sat, 03 Apr 2021 07:15:27: #1 finished! INFO @ Sat, 03 Apr 2021 07:15:27: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 07:15:27: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 07:15:27: #2 number of paired peaks: 369 WARNING @ Sat, 03 Apr 2021 07:15:27: Fewer paired peaks (369) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 369 pairs to build model! INFO @ Sat, 03 Apr 2021 07:15:27: start model_add_line... INFO @ Sat, 03 Apr 2021 07:15:27: start X-correlation... INFO @ Sat, 03 Apr 2021 07:15:27: end of X-cor INFO @ Sat, 03 Apr 2021 07:15:27: #2 finished! INFO @ Sat, 03 Apr 2021 07:15:27: #2 predicted fragment length is 128 bps INFO @ Sat, 03 Apr 2021 07:15:27: #2 alternative fragment length(s) may be 4,128,134,148,155 bps INFO @ Sat, 03 Apr 2021 07:15:27: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX7687149/SRX7687149.20_model.r WARNING @ Sat, 03 Apr 2021 07:15:27: #2 Since the d (128) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 07:15:27: #2 You may need to consider one of the other alternative d(s): 4,128,134,148,155 WARNING @ Sat, 03 Apr 2021 07:15:27: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 07:15:27: #3 Call peaks... INFO @ Sat, 03 Apr 2021 07:15:27: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 07:15:28: #1 tag size is determined as 75 bps INFO @ Sat, 03 Apr 2021 07:15:28: #1 tag size = 75 INFO @ Sat, 03 Apr 2021 07:15:28: #1 total tags in treatment: 16501390 INFO @ Sat, 03 Apr 2021 07:15:28: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 07:15:28: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 07:15:28: #1 tags after filtering in treatment: 11600165 INFO @ Sat, 03 Apr 2021 07:15:28: #1 Redundant rate of treatment: 0.30 INFO @ Sat, 03 Apr 2021 07:15:28: #1 finished! INFO @ Sat, 03 Apr 2021 07:15:28: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 07:15:28: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 07:15:29: #2 number of paired peaks: 369 WARNING @ Sat, 03 Apr 2021 07:15:29: Fewer paired peaks (369) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 369 pairs to build model! INFO @ Sat, 03 Apr 2021 07:15:29: start model_add_line... INFO @ Sat, 03 Apr 2021 07:15:29: start X-correlation... INFO @ Sat, 03 Apr 2021 07:15:29: end of X-cor INFO @ Sat, 03 Apr 2021 07:15:29: #2 finished! INFO @ Sat, 03 Apr 2021 07:15:29: #2 predicted fragment length is 128 bps INFO @ Sat, 03 Apr 2021 07:15:29: #2 alternative fragment length(s) may be 4,128,134,148,155 bps INFO @ Sat, 03 Apr 2021 07:15:29: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX7687149/SRX7687149.10_model.r WARNING @ Sat, 03 Apr 2021 07:15:29: #2 Since the d (128) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 07:15:29: #2 You may need to consider one of the other alternative d(s): 4,128,134,148,155 WARNING @ Sat, 03 Apr 2021 07:15:29: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 07:15:29: #3 Call peaks... INFO @ Sat, 03 Apr 2021 07:15:29: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 07:15:49: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 07:15:52: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 07:16:00: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX7687149/SRX7687149.20_peaks.xls INFO @ Sat, 03 Apr 2021 07:16:00: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX7687149/SRX7687149.20_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 07:16:00: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX7687149/SRX7687149.20_summits.bed INFO @ Sat, 03 Apr 2021 07:16:00: Done! pass1 - making usageList (6 chroms): 0 millis pass2 - checking and writing primary data (168 records, 4 fields): 2 millis CompletedMACS2peakCalling INFO @ Sat, 03 Apr 2021 07:16:03: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX7687149/SRX7687149.10_peaks.xls INFO @ Sat, 03 Apr 2021 07:16:03: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX7687149/SRX7687149.10_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 07:16:03: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX7687149/SRX7687149.10_summits.bed INFO @ Sat, 03 Apr 2021 07:16:03: Done! pass1 - making usageList (7 chroms): 1 millis pass2 - checking and writing primary data (352 records, 4 fields): 1 millis CompletedMACS2peakCalling